GCA_002863265.1 - 3 region(s)

Identified primary metabolite regions

PKKD01000013.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 8.1	fatty_acids-unassigned	Putative	10,081	40,870

PKKD01000003.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 26.1	Arginine2_Hcarbonate	Other	36,034	59,263	Arginine to hydrogen carbonate P. aeruginosa	ARG	100%

PKKD01000046.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 44.1	Nitrate_reductase	E-MGC	1	13,313	Nitrate reductase E. coli	NIR	40%

Region	Type	Class	From	To	Most similar known cluster	Similarity
Region 8.1	fatty_acids-unassigned	Putative	10,081	40,870
Region 26.1	Arginine2_Hcarbonate	Other	36,034	59,263	Arginine to hydrogen carbonate P. aeruginosa	ARG	100%
Region 44.1	Nitrate_reductase	E-MGC	1	13,313	Nitrate reductase E. coli	NIR	40%

No primary metabolite regions were found in these records:: PKKD01000001.1; PKKD01000010.1; PKKD01000100.1; PKKD01000101.1; PKKD01000102.1; PKKD01000011.1; PKKD01000012.1; PKKD01000014.1; PKKD01000015.1; PKKD01000016.1; PKKD01000017.1; PKKD01000018.1; PKKD01000019.1; PKKD01000002.1; PKKD01000020.1; PKKD01000021.1; PKKD01000022.1; PKKD01000023.1; PKKD01000024.1; PKKD01000025.1; PKKD01000026.1; PKKD01000027.1; PKKD01000028.1; PKKD01000029.1; PKKD01000030.1; PKKD01000031.1; PKKD01000032.1; PKKD01000033.1; PKKD01000034.1; PKKD01000035.1; PKKD01000036.1; PKKD01000037.1; PKKD01000038.1; PKKD01000039.1; PKKD01000004.1; PKKD01000040.1; PKKD01000041.1; PKKD01000042.1; PKKD01000043.1; PKKD01000044.1; PKKD01000045.1; PKKD01000047.1; PKKD01000048.1; PKKD01000049.1; PKKD01000005.1; PKKD01000050.1; PKKD01000051.1; PKKD01000052.1; PKKD01000053.1; PKKD01000054.1; PKKD01000055.1; PKKD01000056.1; PKKD01000057.1; PKKD01000058.1; PKKD01000059.1; PKKD01000006.1; PKKD01000060.1; PKKD01000061.1; PKKD01000062.1; PKKD01000063.1; PKKD01000064.1; PKKD01000065.1; PKKD01000066.1; PKKD01000067.1; PKKD01000068.1; PKKD01000069.1; PKKD01000007.1; PKKD01000070.1; PKKD01000071.1; PKKD01000072.1; PKKD01000073.1; PKKD01000074.1; PKKD01000075.1; PKKD01000076.1; PKKD01000077.1; PKKD01000078.1; PKKD01000079.1; PKKD01000008.1; PKKD01000080.1; PKKD01000081.1; PKKD01000082.1; PKKD01000083.1; PKKD01000084.1; PKKD01000085.1; PKKD01000086.1; PKKD01000087.1; PKKD01000088.1; PKKD01000089.1; PKKD01000009.1; PKKD01000090.1; PKKD01000091.1; PKKD01000092.1; PKKD01000093.1; PKKD01000094.1; PKKD01000095.1; PKKD01000096.1; PKKD01000097.1; PKKD01000098.1; PKKD01000099.1

Compact view

PKKD01000013.1 - Region 1 - fatty_acids-unassigned

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Location: 10,081 - 40,870 nt. (total: 30,790 nt) Show pHMM detection rules used

fatty_acids-unassigned: (not (EC1_2-faecali or baiH or baiCD or ECH1_Enoyl_CoA_DH1 or ECH1_Enoyl_CoA_DH2 or ECH1_Enoyl_CoA_DH3 or ECH1_Enoyl_CoA_DH4 or POR or POR_N or PFOR_II) and minimum(4, [AcetylCoA_hyd_C, Acyl-CoA_dh_1, Acyl-CoA_dh_2, EC1_2-faecali, ECH1_8_CARC, ECH_1, ECH_2, HBT, HCDH, HCDH_N, Thiolase_C, Thiolase_N, ketoacyl-synt]))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

PKKD01000003.1 - Region 1 - Arginine2_Hcarbonate

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Location: 36,034 - 59,263 nt. (total: 23,230 nt) Show pHMM detection rules used

Arginine2_Hcarbonate: (Amidinotransf and OTCace and OTCace_N and AA_kinase)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

PKKD01000046.1 - Region 1 - Nitrate_reductase

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Location: 1 - 13,313 nt. (total: 13,313 nt) Show pHMM detection rules used

Region on contig edge.

Nitrate_reductase: (Nitr_red_bet_C and Nitrate_red_del and Nitrate_red_gam and Molybdopterin and minimum(2, [Fer4_11, Molybdopterin, Molydop_binding, Nitr_red_alph_N]))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters