GCA_002869825.1 - 3 region(s)

Identified primary metabolite regions

PNBB01000010.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 11.1	Nitrate_reductase	E-MGC	11,872	38,339	Nitrate reductase E. coli	NIR	40%

PNBB01000019.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 20.1	fatty_acids-unassigned	Putative	11,304	35,426

PNBB01000002.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 32.1	Arginine2_Hcarbonate	Other	23,269	46,499	Arginine to hydrogen carbonate P. aeruginosa	ARG	100%

No primary metabolite regions were found in these records:: PNBB01000100.1; PNBB01000101.1; PNBB01000102.1; PNBB01000103.1; PNBB01000104.1; PNBB01000105.1; PNBB01000106.1; PNBB01000107.1; PNBB01000108.1; PNBB01000109.1; PNBB01000011.1; PNBB01000012.1; PNBB01000013.1; PNBB01000014.1; PNBB01000015.1; PNBB01000016.1; PNBB01000017.1; PNBB01000018.1; PNBB01000001.1; PNBB01000020.1; PNBB01000021.1; PNBB01000022.1; PNBB01000023.1; PNBB01000024.1; PNBB01000025.1; PNBB01000026.1; PNBB01000027.1; PNBB01000028.1; PNBB01000029.1; PNBB01000030.1; PNBB01000031.1; PNBB01000032.1; PNBB01000033.1; PNBB01000034.1; PNBB01000035.1; PNBB01000036.1; PNBB01000037.1; PNBB01000038.1; PNBB01000039.1; PNBB01000003.1; PNBB01000040.1; PNBB01000041.1; PNBB01000042.1; PNBB01000043.1; PNBB01000044.1; PNBB01000045.1; PNBB01000046.1; PNBB01000047.1; PNBB01000048.1; PNBB01000049.1; PNBB01000004.1; PNBB01000050.1; PNBB01000051.1; PNBB01000052.1; PNBB01000053.1; PNBB01000054.1; PNBB01000055.1; PNBB01000056.1; PNBB01000057.1; PNBB01000058.1; PNBB01000059.1; PNBB01000005.1; PNBB01000060.1; PNBB01000061.1; PNBB01000062.1; PNBB01000063.1; PNBB01000064.1; PNBB01000065.1; PNBB01000066.1; PNBB01000067.1; PNBB01000068.1; PNBB01000069.1; PNBB01000006.1; PNBB01000070.1; PNBB01000071.1; PNBB01000072.1; PNBB01000073.1; PNBB01000074.1; PNBB01000075.1; PNBB01000076.1; PNBB01000077.1; PNBB01000078.1; PNBB01000079.1; PNBB01000007.1; PNBB01000080.1; PNBB01000081.1; PNBB01000082.1; PNBB01000083.1; PNBB01000084.1; PNBB01000085.1; PNBB01000086.1; PNBB01000087.1; PNBB01000088.1; PNBB01000089.1; PNBB01000008.1; PNBB01000090.1; PNBB01000091.1; PNBB01000092.1; PNBB01000093.1; PNBB01000094.1; PNBB01000095.1; PNBB01000096.1; PNBB01000097.1; PNBB01000098.1; PNBB01000099.1; PNBB01000009.1

Compact view

PNBB01000010.1 - Region 1 - Nitrate_reductase

Download region GenBank file

Location: 11,872 - 38,339 nt. (total: 26,468 nt) Show pHMM detection rules used

Nitrate_reductase: (Nitr_red_bet_C and Nitrate_red_del and Nitrate_red_gam and Molybdopterin and minimum(2, [Fer4_11, Molybdopterin, Molydop_binding, Nitr_red_alph_N]))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

PNBB01000019.1 - Region 1 - fatty_acids-unassigned

Download region GenBank file

Location: 11,304 - 35,426 nt. (total: 24,123 nt) Show pHMM detection rules used

Region on contig edge.

fatty_acids-unassigned: (not (EC1_2-faecali or baiH or baiCD or ECH1_Enoyl_CoA_DH1 or ECH1_Enoyl_CoA_DH2 or ECH1_Enoyl_CoA_DH3 or ECH1_Enoyl_CoA_DH4 or POR or POR_N or PFOR_II) and minimum(4, [AcetylCoA_hyd_C, Acyl-CoA_dh_1, Acyl-CoA_dh_2, EC1_2-faecali, ECH1_8_CARC, ECH_1, ECH_2, HBT, HCDH, HCDH_N, Thiolase_C, Thiolase_N, ketoacyl-synt]))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

PNBB01000002.1 - Region 1 - Arginine2_Hcarbonate

Download region GenBank file

Location: 23,269 - 46,499 nt. (total: 23,231 nt) Show pHMM detection rules used

Arginine2_Hcarbonate: (Amidinotransf and OTCace and OTCace_N and AA_kinase)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters