GCA_003046135.1 - 3 region(s)

Identified primary metabolite regions

PZQO01000013.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 3.1	pdu	SCFA-other	16,723	55,222	Propanediol degradation S. enterica	PDU	66%

PZQO01000022.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 18.1	Nitrate_reductase	E-MGC	5,462	31,929	Nitrate reductase E. coli	NIR	40%

PZQO01000009.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 40.1	TPP_AA_metabolism	Putative	7,819	45,046

No primary metabolite regions were found in these records:: PZQO01000002.1; PZQO01000020.1; PZQO01000010.1; PZQO01000011.1; PZQO01000021.1; PZQO01000003.1; PZQO01000025.1; PZQO01000018.1; PZQO01000047.1; PZQO01000032.1; PZQO01000031.1; PZQO01000005.1; PZQO01000008.1; PZQO01000027.1; PZQO01000017.1; PZQO01000007.1; PZQO01000026.1; PZQO01000046.1; PZQO01000036.1; PZQO01000004.1; PZQO01000037.1; PZQO01000044.1; PZQO01000028.1; PZQO01000016.1; PZQO01000019.1; PZQO01000015.1; PZQO01000054.1; PZQO01000034.1; PZQO01000053.1; PZQO01000012.1; PZQO01000048.1; PZQO01000014.1; PZQO01000041.1; PZQO01000033.1; PZQO01000039.1; PZQO01000038.1; PZQO01000049.1; PZQO01000035.1; PZQO01000024.1; PZQO01000030.1; PZQO01000040.1; PZQO01000055.1; PZQO01000023.1; PZQO01000050.1; PZQO01000029.1; PZQO01000051.1; PZQO01000043.1; PZQO01000006.1; PZQO01000045.1; PZQO01000052.1; PZQO01000001.1; PZQO01000042.1

Compact view

PZQO01000013.1 - Region 1 - pdu

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Location: 16,723 - 55,222 nt. (total: 38,500 nt) Show pHMM detection rules used

pdu: (minimum(2, [Aldedh, BMC, Cob_adeno_trans, EutN_CcmL, Fe-ADH, Fe-ADH_2, PDU_like, PTAC, PduV-EutP]) and Dehydratase_MU and Dehydratase_SU and Dehydratase_LU)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

PZQO01000022.1 - Region 1 - Nitrate_reductase

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Location: 5,462 - 31,929 nt. (total: 26,468 nt) Show pHMM detection rules used

Nitrate_reductase: (Nitr_red_bet_C and Nitrate_red_del and Nitrate_red_gam and Molybdopterin and minimum(2, [Fer4_11, Molybdopterin, Molydop_binding, Nitr_red_alph_N]))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

PZQO01000009.1 - Region 1 - TPP_AA_metabolism

Download region GenBank file

Location: 7,819 - 45,046 nt. (total: 37,228 nt) Show pHMM detection rules used

TPP_AA_metabolism: (TPP_enzyme_C and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or Gly_8-9_TMA or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and minimum(2, [ALS_ss_C, AlaDh_PNT_C, Arginase, BKACE, BcrAD_BadFG, Beta_elim_lyase, CPSase_L_D2, Cys_Met_Meta_PP, ELFV_dehydrog, GRDB, Glu_syn_central, Glu_synthase, Gly_reductase, HAAA1, HG2B1, HG2B2, HGD-D, HleuD1, HleuD2, HleuS1, HleuS2, Homoserine_dh, ILVD_EDD, IlvC, Lactoyl-CoA1, Lactoyl-CoA2, Lyase_aromatic, MAAL_C, OKR_DC_1_5_lysine, OKR_DC_1_5_ornithine, OKR_DC_1_7_arginine, OKR_DC_1_C, OTCace, PALP, Proline_reductase, Sacchrp_dh_C, TPL, Thr_dehydrat_C, TnaA, Urocanase]) and not (POR or POR_N or PFOR_II))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.