# emapper version: emapper-2.0.1b-2-g816e190 emapper DB: 2.0
# command: ./emapper.py  -i Lactobacillus_acidophilus/1.contigAnn/FFN/A00000023.ffn --translate --temp_dir Lactobacillus_acidophilus/4.eggNOG_mapper --output_dir Lactobacillus_acidophilus/4.eggNOG_mapper --output A00000023 --cpu 36 --keep_mapping_files -m diamond
# time: Tue Jun  7 09:13:43 2022
#query_name	seed_eggNOG_ortholog	seed_ortholog_evalue	seed_ortholog_score	best_tax_level	Preferred_name	GOs	EC	KEGG_ko	KEGG_Pathway	KEGG_Module	KEGG_Reaction	KEGG_rclass	BRITE	KEGG_TC	CAZy	BiGG_Reaction	taxonomic scope	eggNOG OGs	best eggNOG OG	COG Functional cat.	eggNOG free text desc.
PAKBJLMI_00001	1423748.BALB01000002_gene259	1.3e-19	102.1	Lactobacillaceae	phoU			ko:K02039					ko00000				Bacteria	1URN3@1239,3F46W@33958,4HEU9@91061,COG0704@1,COG0704@2	NA|NA|NA	P	Plays a role in the regulation of phosphate uptake
PAKBJLMI_00002	272621.LBA0367	3e-43	181.4	Lactobacillaceae	yfdV	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944		ko:K07088					ko00000			iECW_1372.ECW_m2605,iWFL_1372.ECW_m2605	Bacteria	1VDS9@1239,3F5JF@33958,4HQT5@91061,COG0679@1,COG0679@2	NA|NA|NA	S	Membrane transport protein
PAKBJLMI_00003	272621.LBA0369	4.7e-08	62.8	Lactobacillaceae	rplJ	GO:0003674,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006417,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015934,GO:0016020,GO:0017148,GO:0019222,GO:0019538,GO:0022625,GO:0022626,GO:0030312,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0034641,GO:0034645,GO:0040007,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044877,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0071704,GO:0071944,GO:0080090,GO:1901564,GO:1901566,GO:1901576,GO:1990904,GO:2000112,GO:2000113		ko:K02864,ko:K02935	ko03010,map03010	M00178,M00179			br01610,ko00000,ko00001,ko00002,ko03011				Bacteria	1V3JJ@1239,3F4S4@33958,4HH0N@91061,COG0244@1,COG0244@2	NA|NA|NA	J	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
PAKBJLMI_00004	1423748.BALB01000002_gene256	1.4e-23	115.5	Lactobacillaceae	rplL			ko:K02935	ko03010,map03010	M00178			br01610,ko00000,ko00001,ko00002,ko03011				Bacteria	1V6EI@1239,3F6YA@33958,4HIGQ@91061,COG0222@1,COG0222@2	NA|NA|NA	J	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
PAKBJLMI_00005	272621.LBA0373	2.2e-29	134.8	Lactobacillaceae	rsmC	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016740,GO:0016741,GO:0032259,GO:0044424,GO:0044464	2.1.1.172	ko:K00564			R07234	RC00003	ko00000,ko01000,ko03009				Bacteria	1V1BG@1239,3F4NU@33958,4HHCA@91061,COG2813@1,COG2813@2	NA|NA|NA	J	Methyltransferase
PAKBJLMI_00006	1033837.WANG_0072	5.3e-09	65.9	Lactobacillaceae													Bacteria	1U6M6@1239,2CCGD@1,30AG2@2,3F851@33958,4IGE1@91061	NA|NA|NA		
PAKBJLMI_00007	1423790.BN53_03885	2.2e-18	97.8	Lactobacillaceae	dnaX	GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901576	2.7.7.7	ko:K02341,ko:K02343	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400				Bacteria	1TPS9@1239,3F3P2@33958,4HAUE@91061,COG2812@1,COG2812@2	NA|NA|NA	L	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PAKBJLMI_00008	272621.LBA0376	5.1e-32	143.7	Lactobacillaceae	dnaX	GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901576	2.7.7.7	ko:K02341,ko:K02343	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400				Bacteria	1TPS9@1239,3F3P2@33958,4HAUE@91061,COG2812@1,COG2812@2	NA|NA|NA	L	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PAKBJLMI_00009	272621.LBA0377	1.3e-39	169.1	Lactobacillaceae	tnpB			ko:K07496					ko00000				Bacteria	1TRNY@1239,3F431@33958,4HBKP@91061,COG0675@1,COG0675@2	NA|NA|NA	L	Putative transposase DNA-binding domain
PAKBJLMI_00010	272621.LBA0378	4.7e-15	87.0	Lactobacillaceae	yaaK			ko:K09747					ko00000				Bacteria	1VA1S@1239,3F7F3@33958,4HKH3@91061,COG0718@1,COG0718@2	NA|NA|NA	S	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
PAKBJLMI_00011	272621.LBA0379	3.7e-70	270.8	Lactobacillaceae	recR	GO:0000731,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009987,GO:0018130,GO:0019438,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:1901360,GO:1901362,GO:1901576		ko:K06187	ko03440,map03440				ko00000,ko00001,ko03400				Bacteria	1TR87@1239,3F4JQ@33958,4HAZR@91061,COG0353@1,COG0353@2	NA|NA|NA	L	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
PAKBJLMI_00012	272621.LBA0380	1.1e-34	152.1	Lactobacillaceae													Bacteria	1U6E6@1239,29PC5@1,30AAD@2,3F7PR@33958,4IG5Y@91061	NA|NA|NA	S	Protein of unknown function (DUF2508)
PAKBJLMI_00013	272621.LBA0381	2.3e-116	424.9	Lactobacillaceae	tmk	GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	2.7.4.9	ko:K00943	ko00240,ko01100,map00240,map01100	M00053	R02094,R02098	RC00002	ko00000,ko00001,ko00002,ko01000			iSB619.SA_RS02535	Bacteria	1V1HE@1239,3F4JR@33958,4HGWR@91061,COG0125@1,COG0125@2	NA|NA|NA	F	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
PAKBJLMI_00014	272621.LBA0383	6.5e-70	270.0	Lactobacillaceae	holB		2.7.7.7	ko:K02341	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400				Bacteria	1TRVS@1239,3F50D@33958,4HA3T@91061,COG0470@1,COG0470@2	NA|NA|NA	L	DNA polymerase III
PAKBJLMI_00015	272621.LBA0383	1.1e-34	152.1	Lactobacillaceae	holB		2.7.7.7	ko:K02341	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400				Bacteria	1TRVS@1239,3F50D@33958,4HA3T@91061,COG0470@1,COG0470@2	NA|NA|NA	L	DNA polymerase III
PAKBJLMI_00016	272621.LBA0384	3e-60	237.7	Lactobacillaceae	yabA	GO:0003674,GO:0005488,GO:0005515,GO:0042802											Bacteria	1VA1F@1239,3F864@33958,4HKND@91061,COG4467@1,COG4467@2	NA|NA|NA	L	Involved in initiation control of chromosome replication
PAKBJLMI_00017	272621.LBA0385	1.1e-81	309.3	Lactobacillaceae	rsmI	GO:0000154,GO:0000451,GO:0000453,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044464,GO:0046483,GO:0070677,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0140098,GO:0140102,GO:1901360	2.1.1.198	ko:K07056					ko00000,ko01000,ko03009				Bacteria	1TP6U@1239,3F4AI@33958,4HAH8@91061,COG0313@1,COG0313@2	NA|NA|NA	H	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
PAKBJLMI_00018	272621.LBA0385	5.3e-50	203.4	Lactobacillaceae	rsmI	GO:0000154,GO:0000451,GO:0000453,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044464,GO:0046483,GO:0070677,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0140098,GO:0140102,GO:1901360	2.1.1.198	ko:K07056					ko00000,ko01000,ko03009				Bacteria	1TP6U@1239,3F4AI@33958,4HAH8@91061,COG0313@1,COG0313@2	NA|NA|NA	H	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
PAKBJLMI_00019	272621.LBA0386	9.7e-31	139.0	Lactobacillaceae	fat		3.1.2.21	ko:K01071	ko00061,ko01100,map00061,map01100		R04014,R08157,R08158	RC00014,RC00039	ko00000,ko00001,ko01000,ko01004				Bacteria	1V3RB@1239,3F41B@33958,4HHJ4@91061,COG3884@1,COG3884@2	NA|NA|NA	I	Acyl-ACP thioesterase
PAKBJLMI_00020	272621.LBA0386	2.1e-102	378.3	Lactobacillaceae	fat		3.1.2.21	ko:K01071	ko00061,ko01100,map00061,map01100		R04014,R08157,R08158	RC00014,RC00039	ko00000,ko00001,ko01000,ko01004				Bacteria	1V3RB@1239,3F41B@33958,4HHJ4@91061,COG3884@1,COG3884@2	NA|NA|NA	I	Acyl-ACP thioesterase
PAKBJLMI_00021	272621.LBA0387	5.1e-35	153.3	Lactobacillaceae													Bacteria	1VGAX@1239,2DNHW@1,32XKY@2,3FBRP@33958,4ISA7@91061	NA|NA|NA	S	ECF transporter, substrate-specific component
PAKBJLMI_00022	272621.LBA0387	1.7e-38	164.9	Lactobacillaceae													Bacteria	1VGAX@1239,2DNHW@1,32XKY@2,3FBRP@33958,4ISA7@91061	NA|NA|NA	S	ECF transporter, substrate-specific component
PAKBJLMI_00023	272621.LBA0388	1.4e-133	482.3	Lactobacillaceae	yeaZ	GO:0002949,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006508,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0019538,GO:0034470,GO:0034641,GO:0034660,GO:0042802,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070011,GO:0070525,GO:0071704,GO:0090304,GO:0140096,GO:1901360,GO:1901564	2.3.1.234	ko:K01409,ko:K14742			R10648	RC00070,RC00416	ko00000,ko01000,ko03016				Bacteria	1V4YX@1239,3F3WV@33958,4HHD7@91061,COG1214@1,COG1214@2	NA|NA|NA	O	Universal bacterial protein YeaZ
PAKBJLMI_00024	272621.LBA0389	3.3e-106	391.0	Lactobacillaceae	rimI		2.3.1.128	ko:K03789					ko00000,ko01000,ko03009				Bacteria	1V6KU@1239,3F522@33958,4HIKU@91061,COG0454@1,COG0456@2	NA|NA|NA	K	Ribosomal-protein-alanine acetyltransferase
PAKBJLMI_00025	272621.LBA0390	1.1e-197	695.7	Lactobacillaceae	tsaD	GO:0000287,GO:0000408,GO:0002949,GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005488,GO:0005506,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006508,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0019538,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0070011,GO:0070525,GO:0071704,GO:0090304,GO:0140030,GO:0140032,GO:0140096,GO:1901360,GO:1901564	2.3.1.234	ko:K01409,ko:K03070	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335	R10648	RC00070,RC00416	ko00000,ko00001,ko00002,ko01000,ko02044,ko03016	3.A.5.1,3.A.5.10,3.A.5.2,3.A.5.4			Bacteria	1TQDR@1239,3F4AX@33958,4HANB@91061,COG0533@1,COG0533@2	NA|NA|NA	J	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
PAKBJLMI_00026	272621.LBA0391	1.3e-131	475.7	Lactobacillaceae	deoC	GO:0003674,GO:0003824,GO:0004139,GO:0005975,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009166,GO:0009262,GO:0009264,GO:0009987,GO:0016052,GO:0016829,GO:0016830,GO:0016832,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576	4.1.2.4	ko:K01619	ko00030,map00030		R01066	RC00436,RC00437	ko00000,ko00001,ko01000				Bacteria	1TPAJ@1239,3FCCC@33958,4HF5U@91061,COG0274@1,COG0274@2	NA|NA|NA	F	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
PAKBJLMI_00027	272621.LBA0392	2.1e-182	644.8	Lactobacillaceae				ko:K22230	ko00562,ko01120,map00562,map01120		R09954	RC00182	ko00000,ko00001,ko01000				Bacteria	1TQSS@1239,3F4U8@33958,4HV6B@91061,COG0673@1,COG0673@2	NA|NA|NA	S	Oxidoreductase family, NAD-binding Rossmann fold
PAKBJLMI_00028	272621.LBA0393	4.9e-128	463.8	Lactobacillaceae	yegW			ko:K03710,ko:K11922					ko00000,ko03000				Bacteria	1TVMZ@1239,3F66Q@33958,4H9TD@91061,COG2188@1,COG2188@2	NA|NA|NA	K	UTRA
PAKBJLMI_00029	272621.LBA0394	6.5e-234	816.2	Lactobacillaceae	yfdE	GO:0003674,GO:0003824,GO:0008410,GO:0016740,GO:0016782,GO:0036412	2.8.3.16,2.8.3.19	ko:K07749,ko:K18702					ko00000,ko01000				Bacteria	1TP54@1239,3F4GS@33958,4HABI@91061,COG1804@1,COG1804@2	NA|NA|NA	C	Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
PAKBJLMI_00030	272621.LBA0395	4.3e-266	923.3	Lactobacillaceae	frc	GO:0003674,GO:0003824,GO:0008150,GO:0008410,GO:0009268,GO:0009628,GO:0009987,GO:0010447,GO:0016740,GO:0016782,GO:0033608,GO:0050896,GO:0051716,GO:0071214,GO:0071467,GO:0071468,GO:0104004	2.8.3.16,2.8.3.19	ko:K07749,ko:K18702					ko00000,ko01000			iUMNK88_1353.UMNK88_2972	Bacteria	1TP54@1239,3F4GS@33958,4HABI@91061,COG1804@1,COG1804@2	NA|NA|NA	C	Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
PAKBJLMI_00031	272621.LBA0396	0.0	1124.0	Lactobacillaceae	oxc	GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006082,GO:0008150,GO:0008152,GO:0008949,GO:0009056,GO:0009268,GO:0009628,GO:0009987,GO:0010447,GO:0016054,GO:0016829,GO:0016830,GO:0016831,GO:0017076,GO:0019752,GO:0019842,GO:0030554,GO:0030976,GO:0032553,GO:0032555,GO:0032559,GO:0033609,GO:0033611,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0043531,GO:0043648,GO:0043649,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0046872,GO:0048037,GO:0050662,GO:0050896,GO:0051716,GO:0071214,GO:0071467,GO:0071468,GO:0071704,GO:0097159,GO:0097367,GO:0104004,GO:1901265,GO:1901363,GO:1901575,GO:1901681	4.1.1.8	ko:K01577	ko00630,ko01100,map00630,map01100		R01908	RC00620	ko00000,ko00001,ko01000			iEcSMS35_1347.EcSMS35_2523,iNJ661.Rv0118c	Bacteria	1TQE8@1239,3F3R9@33958,4HBUS@91061,COG0028@1,COG0028@2	NA|NA|NA	EH	Belongs to the TPP enzyme family
PAKBJLMI_00032	272621.LBA0397	0.0	1187.2	Lactobacillaceae	uup			ko:K06158					ko00000,ko03012				Bacteria	1TPAX@1239,3F3QI@33958,4HBVV@91061,COG0488@1,COG0488@2	NA|NA|NA	S	ABC transporter, ATP-binding protein
PAKBJLMI_00033	272621.LBA0398	1.3e-111	409.1	Lactobacillaceae	rex			ko:K01926					ko00000,ko03000				Bacteria	1TSMR@1239,3F40G@33958,4HB7Q@91061,COG2344@1,COG2344@2	NA|NA|NA	K	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
PAKBJLMI_00034	272621.LBA0399	1e-184	652.5	Lactobacillaceae	scrR			ko:K02529,ko:K03484					ko00000,ko03000				Bacteria	1TT9H@1239,3FC5B@33958,4HDUY@91061,COG1609@1,COG1609@2	NA|NA|NA	K	helix_turn _helix lactose operon repressor
PAKBJLMI_00035	272621.LBA0400	5.6e-296	1022.7	Lactobacillaceae	scrB		3.2.1.26	ko:K01193	ko00052,ko00500,ko01100,map00052,map00500,map01100		R00801,R00802,R02410,R03635,R03921,R06088	RC00028,RC00077	ko00000,ko00001,ko01000		GH32		Bacteria	1TPAE@1239,3F4UD@33958,4H9Y7@91061,COG1621@1,COG1621@2	NA|NA|NA	G	invertase
PAKBJLMI_00036	272621.LBA0401	0.0	1225.7	Lactobacillaceae	scrA		2.7.1.208,2.7.1.211,5.3.1.1	ko:K01803,ko:K02749,ko:K02750,ko:K02755,ko:K02756,ko:K02757,ko:K02808,ko:K02809,ko:K02810	ko00010,ko00051,ko00500,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko02060,map00010,map00051,map00500,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map02060	M00001,M00002,M00003,M00268,M00269,M00271	R00811,R01015,R04111	RC00017,RC00423,RC03206	ko00000,ko00001,ko00002,ko01000,ko02000,ko04147	4.A.1.1.10,4.A.1.1.16,4.A.1.1.4,4.A.1.1.8,4.A.1.2.1,4.A.1.2.10,4.A.1.2.11,4.A.1.2.12,4.A.1.2.2,4.A.1.2.5,4.A.1.2.6,4.A.1.2.9			Bacteria	1TP5X@1239,3F458@33958,4HA0I@91061,COG1263@1,COG1263@2,COG1264@1,COG1264@2,COG2190@1,COG2190@2	NA|NA|NA	G	phosphotransferase system
PAKBJLMI_00037	272621.LBA0402	5.8e-75	287.0	Lactobacillaceae													Bacteria	1U6X7@1239,2CHFM@1,30ANV@2,3F8NI@33958,4IGRG@91061	NA|NA|NA		
PAKBJLMI_00038	272621.LBA0403	1.1e-77	295.8	Lactobacillaceae	XK27_02470												Bacteria	1VBF7@1239,3F7K4@33958,4IPQI@91061,COG3279@1,COG3279@2	NA|NA|NA	K	LytTr DNA-binding domain
PAKBJLMI_00039	272621.LBA0404	6.9e-128	463.4	Lactobacillaceae	liaI			ko:K11619	ko02020,map02020	M00754			ko00000,ko00001,ko00002				Bacteria	1V7WJ@1239,3F6JJ@33958,4HR21@91061,COG4758@1,COG4758@2	NA|NA|NA	S	membrane
PAKBJLMI_00040	272621.LBA0405	6.7e-44	183.0	Lactobacillaceae	groS	GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006355,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010033,GO:0010468,GO:0010556,GO:0016020,GO:0016032,GO:0016465,GO:0019058,GO:0019068,GO:0019219,GO:0019222,GO:0019899,GO:0030312,GO:0031323,GO:0031326,GO:0032991,GO:0033554,GO:0034605,GO:0035375,GO:0035966,GO:0040007,GO:0042221,GO:0042802,GO:0043167,GO:0043169,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046677,GO:0046872,GO:0050789,GO:0050794,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0051171,GO:0051252,GO:0051704,GO:0051716,GO:0060255,GO:0061077,GO:0065007,GO:0071944,GO:0080090,GO:0101031,GO:1903506,GO:1990220,GO:2000112,GO:2001141		ko:K04078					ko00000,ko03029,ko03110				Bacteria	1V9ZM@1239,3F7CZ@33958,4HKEK@91061,COG0234@1,COG0234@2	NA|NA|NA	O	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
PAKBJLMI_00041	272621.LBA0406	5.9e-294	1016.1	Lactobacillaceae	groL	GO:0001817,GO:0001819,GO:0001871,GO:0002791,GO:0002793,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009986,GO:0009987,GO:0016465,GO:0030246,GO:0030247,GO:0032677,GO:0032757,GO:0032879,GO:0032880,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0044764,GO:0046812,GO:0048518,GO:0048522,GO:0050707,GO:0050708,GO:0050714,GO:0050715,GO:0050789,GO:0050794,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051082,GO:0051222,GO:0051223,GO:0051239,GO:0051240,GO:0051704,GO:0061077,GO:0065007,GO:0070201,GO:0090087,GO:0098630,GO:0098743,GO:0101031,GO:1903530,GO:1903532,GO:1904951,GO:1990220,GO:2000482,GO:2000484,GO:2001065		ko:K04077	ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152				ko00000,ko00001,ko03019,ko03029,ko03110,ko04147				Bacteria	1TP1T@1239,3F3MM@33958,4HA38@91061,COG0459@1,COG0459@2	NA|NA|NA	O	Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
PAKBJLMI_00042	1423767.BALU01000013_gene100	4.5e-39	166.8	Lactobacillaceae	mutS	GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391		ko:K03555	ko03430,map03430				ko00000,ko00001,ko03400				Bacteria	1TPRJ@1239,3F4A5@33958,4HA63@91061,COG0249@1,COG0249@2	NA|NA|NA	L	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
PAKBJLMI_00043	272621.LBA0408	0.0	1458.4	Lactobacillaceae	mutS	GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391		ko:K03555	ko03430,map03430				ko00000,ko00001,ko03400				Bacteria	1TPRJ@1239,3F4A5@33958,4HA63@91061,COG0249@1,COG0249@2	NA|NA|NA	L	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
PAKBJLMI_00044	272621.LBA0409	0.0	1212.2	Lactobacillaceae	mutL	GO:0000166,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008144,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0030554,GO:0032300,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033554,GO:0034641,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363,GO:1990391		ko:K03572	ko03430,map03430				ko00000,ko00001,ko03400				Bacteria	1TPGK@1239,3F3PK@33958,4HB34@91061,COG0323@1,COG0323@2	NA|NA|NA	L	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
PAKBJLMI_00045	272621.LBA0410	2.7e-103	381.3	Lactobacillaceae	ruvA	GO:0000217,GO:0000400,GO:0000724,GO:0000725,GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003824,GO:0004386,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007154,GO:0008150,GO:0008152,GO:0009314,GO:0009378,GO:0009379,GO:0009432,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0022607,GO:0031668,GO:0032392,GO:0032508,GO:0032991,GO:0033202,GO:0033554,GO:0034641,GO:0042802,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0048476,GO:0050896,GO:0051259,GO:0051260,GO:0051262,GO:0051276,GO:0051289,GO:0051716,GO:0065003,GO:0071103,GO:0071496,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0097159,GO:0140097,GO:1901360,GO:1901363,GO:1902494	3.6.4.12	ko:K03550	ko03440,map03440				ko00000,ko00001,ko01000,ko03400				Bacteria	1V3KF@1239,3F42W@33958,4HHI5@91061,COG0632@1,COG0632@2	NA|NA|NA	L	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
PAKBJLMI_00046	272621.LBA0411	4.6e-188	663.7	Lactobacillaceae	ruvB	GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0031668,GO:0033554,GO:0050896,GO:0051716,GO:0071496	3.6.4.12	ko:K03551	ko03440,map03440				ko00000,ko00001,ko01000,ko03400				Bacteria	1TR47@1239,3F47S@33958,4HBMW@91061,COG2255@1,COG2255@2	NA|NA|NA	L	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
PAKBJLMI_00047	272621.LBA0412	1.1e-47	196.1	Lactobacillaceae	yajC	GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0031522,GO:0032991,GO:0044425,GO:0044459,GO:0044464,GO:0071944		ko:K03210	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335			ko00000,ko00001,ko00002,ko02044	3.A.5.1,3.A.5.2			Bacteria	1VEMC@1239,3F7EY@33958,4HNK0@91061,COG1862@1,COG1862@2	NA|NA|NA	U	Preprotein translocase
PAKBJLMI_00048	272621.LBA0413	5.3e-286	989.6	Lactobacillaceae	zwf	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	1.1.1.363,1.1.1.49	ko:K00036	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,ko05230,map00030,map00480,map01100,map01110,map01120,map01130,map01200,map05230	M00004,M00006,M00008	R00835,R02736,R10907	RC00001,RC00066	ko00000,ko00001,ko00002,ko01000,ko04147			iIT341.HP1101	Bacteria	1TPYF@1239,3F48G@33958,4HA73@91061,COG0364@1,COG0364@2	NA|NA|NA	G	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
PAKBJLMI_00049	272621.LBA0414	2.1e-213	748.0	Lactobacillaceae	dinB	GO:0000731,GO:0003674,GO:0003824,GO:0003887,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0006139,GO:0006259,GO:0006260,GO:0006281,GO:0006301,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0016604,GO:0016607,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019985,GO:0031668,GO:0031974,GO:0031981,GO:0032991,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0035770,GO:0036464,GO:0042276,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0070013,GO:0071496,GO:0071704,GO:0071897,GO:0090304,GO:0140097,GO:1901360,GO:1901362,GO:1901576,GO:1990904	2.7.7.7	ko:K02346					ko00000,ko01000,ko03400				Bacteria	1TP42@1239,3F44N@33958,4HADJ@91061,COG0389@1,COG0389@2	NA|NA|NA	L	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PAKBJLMI_00050	272621.LBA0415	6.1e-182	643.3	Lactobacillaceae	nrnA	GO:0008150,GO:0040007	3.1.13.3,3.1.3.7	ko:K06881	ko00920,ko01100,ko01120,map00920,map01100,map01120		R00188,R00508	RC00078	ko00000,ko00001,ko01000,ko03400				Bacteria	1TPXX@1239,3F4FC@33958,4H9ZW@91061,COG0618@1,COG0618@2	NA|NA|NA	S	DHHA1 domain protein
PAKBJLMI_00051	272621.LBA0416	3.3e-229	800.8	Lactobacillaceae	cshB	GO:0000166,GO:0003674,GO:0003676,GO:0003723,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006807,GO:0006950,GO:0008026,GO:0008144,GO:0008150,GO:0008152,GO:0008186,GO:0009266,GO:0009295,GO:0009409,GO:0009628,GO:0009987,GO:0010501,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043590,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0070035,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:1901265,GO:1901360,GO:1901363	3.6.4.13	ko:K05592,ko:K18692	ko03018,map03018				ko00000,ko00001,ko01000,ko03009,ko03019				Bacteria	1TPAP@1239,3F4FQ@33958,4HA98@91061,COG0513@1,COG0513@2	NA|NA|NA	JKL	DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
PAKBJLMI_00052	272621.LBA0417	0.0	1756.9	Lactobacillaceae	alaS	GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576	6.1.1.7	ko:K01872	ko00970,map00970	M00359,M00360	R03038	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016				Bacteria	1TPK6@1239,3F3QS@33958,4H9XC@91061,COG0013@1,COG0013@2	NA|NA|NA	J	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
PAKBJLMI_00053	1423754.BALY01000042_gene1037	2e-42	177.9	Lactobacillaceae	yrzL												Bacteria	1VAC4@1239,3F7EG@33958,4HKD0@91061,COG4472@1,COG4472@2	NA|NA|NA	S	Belongs to the UPF0297 family
PAKBJLMI_00054	272621.LBA0419	2.7e-73	281.2	Lactobacillaceae	yqgF	GO:0000966,GO:0000967,GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008296,GO:0008408,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0022613,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0040007,GO:0042254,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0140097,GO:1901360		ko:K07447					ko00000,ko01000				Bacteria	1V6ER@1239,3F6NI@33958,4HH04@91061,COG0816@1,COG0816@2	NA|NA|NA	J	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
PAKBJLMI_00055	272621.LBA0420	2.8e-51	207.6	Lactobacillaceae	yrzB												Bacteria	1VAPW@1239,3F6X3@33958,4HKV7@91061,COG3906@1,COG3906@2	NA|NA|NA	S	Belongs to the UPF0473 family
PAKBJLMI_00056	272621.LBA0421	0.0	1335.5	Lactobacillaceae	mutS2	GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391		ko:K07456	ko03430,map03430				ko00000,ko00001,ko03400				Bacteria	1TP5W@1239,3F4DX@33958,4H9NZ@91061,COG1193@1,COG1193@2	NA|NA|NA	L	Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
PAKBJLMI_00057	272621.LBA0422	6e-54	216.5	Lactobacillaceae	trxA	GO:0003674,GO:0003824,GO:0004791,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0015035,GO:0015036,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0016671,GO:0019725,GO:0033554,GO:0034599,GO:0042221,GO:0042592,GO:0044424,GO:0044444,GO:0044464,GO:0045454,GO:0047134,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748		ko:K03671	ko04621,ko05418,map04621,map05418				ko00000,ko00001,ko03110				Bacteria	1VA3Y@1239,3F6Y3@33958,4HKKX@91061,COG3118@1,COG3118@2	NA|NA|NA	O	Belongs to the thioredoxin family
PAKBJLMI_00058	272621.LBA0423	5.7e-35	153.7	Lactobacillaceae	mscL	GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006884,GO:0008150,GO:0008361,GO:0008381,GO:0009987,GO:0009992,GO:0015267,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0022803,GO:0022836,GO:0022857,GO:0030104,GO:0031224,GO:0031226,GO:0032535,GO:0042592,GO:0042802,GO:0044425,GO:0044459,GO:0044464,GO:0048878,GO:0051179,GO:0051234,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071840,GO:0071944,GO:0090066		ko:K03282					ko00000,ko02000	1.A.22.1			Bacteria	1VA14@1239,3F6YZ@33958,4HKIA@91061,COG1970@1,COG1970@2	NA|NA|NA	M	Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
PAKBJLMI_00059	272621.LBA0424	2.3e-69	268.1	Lactobacillaceae	yslB												Bacteria	1VD7N@1239,3F7ZI@33958,4HKV3@91061,COG1719@1,COG1719@2	NA|NA|NA	S	Protein of unknown function (DUF2507)
PAKBJLMI_00060	272621.LBA0425	3.8e-145	520.8	Lactobacillaceae	murI	GO:0000270,GO:0003674,GO:0003824,GO:0004857,GO:0005575,GO:0005623,GO:0005886,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008657,GO:0008881,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0010911,GO:0016020,GO:0016853,GO:0016854,GO:0016855,GO:0030203,GO:0030234,GO:0032780,GO:0034645,GO:0036361,GO:0042030,GO:0042546,GO:0043086,GO:0043170,GO:0043462,GO:0044036,GO:0044038,GO:0044085,GO:0044092,GO:0044237,GO:0044249,GO:0044260,GO:0044464,GO:0047661,GO:0050790,GO:0051336,GO:0051346,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0071944,GO:0072586,GO:0098772,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:2000371,GO:2000372	3.6.1.66,5.1.1.3	ko:K01776,ko:K02428	ko00230,ko00471,ko01100,map00230,map00471,map01100		R00260,R00426,R00720,R01855,R02100,R02720,R03531	RC00002,RC00302	ko00000,ko00001,ko01000,ko01011			iYO844.BSU28390	Bacteria	1TPPR@1239,3F446@33958,4HA46@91061,COG0796@1,COG0796@2	NA|NA|NA	M	Provides the (R)-glutamate required for cell wall biosynthesis
PAKBJLMI_00061	272621.LBA0426	1.1e-110	406.0	Lactobacillaceae	rdgB	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576	3.6.1.66,5.1.1.3	ko:K01776,ko:K02428	ko00230,ko00471,ko01100,map00230,map00471,map01100		R00260,R00426,R00720,R01855,R02100,R02720,R03531	RC00002,RC00302	ko00000,ko00001,ko01000,ko01011				Bacteria	1V6RN@1239,3F3KD@33958,4HCP6@91061,COG0127@1,COG0127@2	NA|NA|NA	F	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
PAKBJLMI_00062	891391.LAC30SC_02210	8.2e-130	469.9	Lactobacillaceae	ykuT	GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0006810,GO:0006950,GO:0006970,GO:0008150,GO:0008381,GO:0009628,GO:0009987,GO:0015267,GO:0022803,GO:0022836,GO:0022857,GO:0033554,GO:0042802,GO:0050896,GO:0051179,GO:0051234,GO:0051716,GO:0055085,GO:0071214,GO:0071470,GO:0104004		ko:K22044					ko00000,ko02000	1.A.23.3			Bacteria	1TR9Z@1239,3F49U@33958,4HCB8@91061,COG0668@1,COG0668@2	NA|NA|NA	M	mechanosensitive ion channel
PAKBJLMI_00063	272621.LBA0428	3.6e-09	68.2	Lactobacillaceae	WQ51_05790												Bacteria	1VAXN@1239,3F6KB@33958,4HM93@91061,COG4768@1,COG4768@2	NA|NA|NA	S	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
PAKBJLMI_00064	272621.LBA0429	2.1e-45	188.3	Lactobacillaceae													Bacteria	1U63A@1239,29P3Z@1,30A26@2,3F6XS@33958,4IFSN@91061	NA|NA|NA		
PAKBJLMI_00065	272621.LBA0430	7.5e-216	756.1	Lactobacillaceae	pepQ		3.4.13.9	ko:K01271					ko00000,ko01000,ko01002				Bacteria	1TQ6R@1239,3F3X5@33958,4HA5I@91061,COG0006@1,COG0006@2	NA|NA|NA	E	Creatinase/Prolidase N-terminal domain
PAKBJLMI_00066	272621.LBA0431	2.9e-182	644.4	Lactobacillaceae	ccpA	GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0032991,GO:0032993,GO:0043565,GO:0044212,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1990837,GO:2000112,GO:2000113,GO:2001141		ko:K02529					ko00000,ko03000				Bacteria	1TQ7K@1239,3F4AA@33958,4H9NG@91061,COG1609@1,COG1609@2	NA|NA|NA	K	catabolite control protein A
PAKBJLMI_00067	272621.LBA0432	2.4e-83	314.7	Lactobacillaceae	ugpQ		3.1.4.46	ko:K01126	ko00564,map00564		R01030,R01470	RC00017,RC00425	ko00000,ko00001,ko01000				Bacteria	1V3W4@1239,3F4E3@33958,4HFNQ@91061,COG0584@1,COG0584@2	NA|NA|NA	C	glycerophosphoryl diester phosphodiesterase
PAKBJLMI_00068	272621.LBA0432	3.1e-167	594.3	Lactobacillaceae	ugpQ		3.1.4.46	ko:K01126	ko00564,map00564		R01030,R01470	RC00017,RC00425	ko00000,ko00001,ko01000				Bacteria	1V3W4@1239,3F4E3@33958,4HFNQ@91061,COG0584@1,COG0584@2	NA|NA|NA	C	glycerophosphoryl diester phosphodiesterase
PAKBJLMI_00069	272621.LBA0433	1.9e-55	221.5	Lactobacillaceae													Bacteria	1VX4A@1239,2C26E@1,3424N@2,3F70Q@33958,4HXT9@91061	NA|NA|NA		
PAKBJLMI_00070	272621.LBA0434	4.7e-210	736.9	Lactobacillaceae	yunD		3.1.3.5	ko:K01081	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110		R00183,R00511,R00963,R01126,R01227,R01569,R01664,R01968,R02088,R02102,R02323,R02719,R03346	RC00017	ko00000,ko00001,ko01000				Bacteria	1TPV2@1239,3FC1D@33958,4H9VJ@91061,COG0737@1,COG0737@2	NA|NA|NA	F	Belongs to the 5'-nucleotidase family
PAKBJLMI_00071	272621.LBA0434	1.1e-46	192.2	Lactobacillaceae	yunD		3.1.3.5	ko:K01081	ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110		R00183,R00511,R00963,R01126,R01227,R01569,R01664,R01968,R02088,R02102,R02323,R02719,R03346	RC00017	ko00000,ko00001,ko01000				Bacteria	1TPV2@1239,3FC1D@33958,4H9VJ@91061,COG0737@1,COG0737@2	NA|NA|NA	F	Belongs to the 5'-nucleotidase family
PAKBJLMI_00072	272621.LBA0435	1.3e-81	309.3	Lactobacillaceae	yutD												Bacteria	1VA85@1239,3F66P@33958,4HKF7@91061,COG4470@1,COG4470@2	NA|NA|NA	S	Protein of unknown function (DUF1027)
PAKBJLMI_00073	272621.LBA0436	7.5e-146	523.1	Lactobacillaceae	nagD		2.7.1.25,3.1.3.41	ko:K00860,ko:K01101	ko00230,ko00627,ko00920,ko01100,ko01120,map00230,map00627,map00920,map01100,map01120	M00176	R00509,R03024,R04928	RC00002,RC00078,RC00151	ko00000,ko00001,ko00002,ko01000				Bacteria	1TQGM@1239,3F49D@33958,4HA3R@91061,COG0647@1,COG0647@2	NA|NA|NA	G	Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
PAKBJLMI_00074	272621.LBA0437	1.1e-107	396.0	Lactobacillaceae													Bacteria	1V7UW@1239,3F4YP@33958,4HHH4@91061,COG4478@1,COG4478@2	NA|NA|NA	S	Protein of unknown function (DUF1461)
PAKBJLMI_00075	272621.LBA0438	2.3e-116	424.9	Lactobacillaceae	dedA			ko:K03975					ko00000				Bacteria	1UZ4P@1239,3F4KG@33958,4HG3F@91061,COG0586@1,COG0586@2	NA|NA|NA	S	SNARE-like domain protein
PAKBJLMI_00076	272621.LBA0439	1.1e-150	539.3	Lactobacillaceae	yumC	GO:0008150,GO:0009987,GO:0010035,GO:0010038,GO:0010039,GO:0042221,GO:0050896,GO:0051716,GO:0070887,GO:0071241,GO:0071248,GO:0071281	1.18.1.2,1.19.1.1,1.8.1.9	ko:K00384,ko:K21567	ko00450,map00450		R02016,R03596,R09372	RC00013,RC02518,RC02873	ko00000,ko00001,ko01000			iYO844.BSU32110	Bacteria	1TRPN@1239,3F3NQ@33958,4H9V7@91061,COG0492@1,COG0492@2	NA|NA|NA	C	Ferredoxin--NADP reductase
PAKBJLMI_00095	272621.LBA0441	7.1e-74	283.1	Lactobacillaceae	nudG	GO:0003674,GO:0003824,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360	3.6.1.55,3.6.1.65	ko:K03574,ko:K08320					ko00000,ko01000,ko03400			iE2348C_1286.E2348C_1887,iECP_1309.ECP_1705,iLF82_1304.LF82_1533,iNRG857_1313.NRG857_08815,iPC815.YPO2167,iSSON_1240.SSON_1397	Bacteria	1V6ET@1239,3F6VA@33958,4HIP6@91061,COG0494@1,COG0494@2	NA|NA|NA	L	NUDIX domain
PAKBJLMI_00096	272621.LBA0442	0.0	1727.6	Lactobacillaceae													Bacteria	1TQ62@1239,3F3YQ@33958,4HAJ1@91061,COG1061@1,COG1061@2,COG3886@1,COG3886@2	NA|NA|NA	L	Helicase C-terminal domain protein
PAKBJLMI_00097	272621.LBA0443	1.6e-45	188.3	Lactobacillaceae		GO:0008150,GO:0009314,GO:0009628,GO:0010165,GO:0010212,GO:0050896											Bacteria	1TQ62@1239,3F3YQ@33958,4HAJ1@91061,COG1061@1,COG1061@2	NA|NA|NA	L	Helicase C-terminal domain protein
PAKBJLMI_00109	272621.LBA0444	2.3e-223	781.2	Lactobacillaceae	mgs	GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006629,GO:0006643,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016740,GO:0016757,GO:0016758,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0046467,GO:0046872,GO:0071704,GO:1901576	2.4.1.337	ko:K19002	ko00561,ko01100,map00561,map01100		R10850	RC00005,RC00059	ko00000,ko00001,ko01000,ko01003		GT4		Bacteria	1TPTA@1239,3FC1E@33958,4IPQK@91061,COG0438@1,COG0438@2	NA|NA|NA	M	Glycosyl transferase 4-like domain
PAKBJLMI_00110	272621.LBA0445	2.9e-201	707.6	Lactobacillaceae	cpoA	GO:0003674,GO:0003824,GO:0006629,GO:0006643,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016740,GO:0016757,GO:0016758,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0046467,GO:0071704,GO:1901576		ko:K13678			R10865	RC00005,RC00049	ko00000,ko01000,ko01003		GT4		Bacteria	1TPSS@1239,3F47X@33958,4HB9F@91061,COG0438@1,COG0438@2	NA|NA|NA	M	Glycosyltransferase, group 1 family protein
PAKBJLMI_00111	272621.LBA0446	4.7e-180	637.1	Lactobacillaceae	mprF			ko:K07027					ko00000,ko02000	4.D.2			Bacteria	1TR9T@1239,3FBJD@33958,4IQVI@91061,COG0392@1,COG0392@2	NA|NA|NA	S	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
PAKBJLMI_00112	272621.LBA0447	0.0	1359.0	Lactobacillaceae	ltaS	GO:0005575,GO:0005576	2.7.8.20	ko:K01138,ko:K19005	ko00561,ko01100,map00561,map01100		R05081,R10849	RC00017	ko00000,ko00001,ko01000				Bacteria	1TRMA@1239,3F3R7@33958,4H9S0@91061,COG1368@1,COG1368@2	NA|NA|NA	M	Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
PAKBJLMI_00113	272621.LBA0448	7.5e-25	119.4	Lactobacillaceae	secG	GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006616,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0022857,GO:0022884,GO:0031522,GO:0032978,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0042886,GO:0042887,GO:0043952,GO:0044464,GO:0045047,GO:0045184,GO:0046907,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061024,GO:0065002,GO:0070727,GO:0070972,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:1904680		ko:K03075	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335			ko00000,ko00001,ko00002,ko02044	3.A.5.1,3.A.5.2			Bacteria	1VEQR@1239,3F7IQ@33958,4HNKC@91061,COG1314@1,COG1314@2	NA|NA|NA	U	Preprotein translocase
PAKBJLMI_00114	272621.LBA0449	0.0	1492.6	Lactobacillaceae	rnr			ko:K12573,ko:K12585	ko03018,map03018	M00391			ko00000,ko00001,ko00002,ko01000,ko03016,ko03019				Bacteria	1TQ1G@1239,3F4EC@33958,4HBBH@91061,COG0557@1,COG0557@2	NA|NA|NA	J	3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
PAKBJLMI_00115	272621.LBA0450	7.4e-77	293.1	Lactobacillaceae	smpB	GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0070930,GO:0071704,GO:0097159,GO:1901363,GO:1901564		ko:K03664					ko00000				Bacteria	1V3IJ@1239,3F65B@33958,4HGZX@91061,COG0691@1,COG0691@2	NA|NA|NA	J	the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
PAKBJLMI_00117	272621.LBA0452	4.2e-189	667.2	Lactobacillaceae	manL		2.7.1.191	ko:K02793,ko:K02794	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	M00276	R02630	RC00017,RC03206	ko00000,ko00001,ko00002,ko01000,ko02000	4.A.6.1			Bacteria	1TQJ4@1239,3FC7R@33958,4HTTA@91061,COG2893@1,COG2893@2,COG3444@1,COG3444@2	NA|NA|NA	G	PTS system sorbose subfamily IIB component
PAKBJLMI_00118	272621.LBA0455	2.5e-136	491.5	Lactobacillaceae	manY			ko:K02795,ko:K02796	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	M00276	R02630	RC00017,RC03206	ko00000,ko00001,ko00002,ko02000	4.A.6.1			Bacteria	1TPKK@1239,3F3V5@33958,4H9QI@91061,COG3715@1,COG3715@2	NA|NA|NA	G	PTS system
PAKBJLMI_00119	272621.LBA0456	6.3e-176	623.2	Lactobacillaceae	manN			ko:K02796	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	M00276	R02630	RC00017,RC03206	ko00000,ko00001,ko00002,ko02000	4.A.6.1			Bacteria	1TQA3@1239,3F3KR@33958,4HA3K@91061,COG3716@1,COG3716@2	NA|NA|NA	G	system, mannose fructose sorbose family IID component
PAKBJLMI_00120	272621.LBA0457	4e-65	253.8	Lactobacillaceae	manO												Bacteria	1V6KV@1239,3FB56@33958,4HX8Z@91061,COG4687@1,COG4687@2	NA|NA|NA	S	Domain of unknown function (DUF956)
PAKBJLMI_00121	272621.LBA0458	3.7e-160	570.9	Lactobacillaceae													Bacteria	1TP77@1239,3F3VP@33958,4HAZB@91061,COG0583@1,COG0583@2	NA|NA|NA	K	Transcriptional regulator
PAKBJLMI_00122	272621.LBA0459	3.9e-69	267.3	Lactobacillaceae													Bacteria	1TSQQ@1239,3F73Z@33958,4HJJ7@91061,COG0110@1,COG0110@2	NA|NA|NA	S	transferase hexapeptide repeat
PAKBJLMI_00123	272621.LBA0460	9.2e-248	862.4	Lactobacillaceae	cycA	GO:0001761,GO:0001762,GO:0003333,GO:0003674,GO:0005215,GO:0005326,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0006836,GO:0006855,GO:0006865,GO:0008150,GO:0008324,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015175,GO:0015179,GO:0015180,GO:0015187,GO:0015238,GO:0015318,GO:0015711,GO:0015804,GO:0015807,GO:0015808,GO:0015816,GO:0015849,GO:0015893,GO:0016020,GO:0022857,GO:0022858,GO:0022889,GO:0032328,GO:0032329,GO:0034220,GO:0042221,GO:0042493,GO:0042891,GO:0042895,GO:0042940,GO:0042941,GO:0042942,GO:0042943,GO:0042944,GO:0042945,GO:0044464,GO:0046942,GO:0046943,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098655,GO:0098656,GO:1902475,GO:1903825,GO:1905039		ko:K03293,ko:K11737					ko00000,ko02000	2.A.3.1,2.A.3.1.7		iECO111_1330.ECO111_5093,iECO26_1355.ECO26_5376,iEcHS_1320.EcHS_A4458,iSbBS512_1146.SbBS512_E4749,iYL1228.KPN_04601	Bacteria	1TP97@1239,3F3YD@33958,4H9QX@91061,COG1113@1,COG1113@2	NA|NA|NA	E	Amino acid permease
PAKBJLMI_00124	272621.LBA0461	0.0	1744.6	Lactobacillaceae	adhE		1.1.1.1,1.2.1.10	ko:K04072	ko00010,ko00071,ko00350,ko00620,ko00625,ko00626,ko00650,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00620,map00625,map00626,map00650,map01100,map01110,map01120,map01130,map01220		R00228,R00623,R00754,R01172,R04880,R05233,R05234,R06917,R06927	RC00004,RC00050,RC00088,RC00099,RC00116,RC00184,RC00649,RC01195	ko00000,ko00001,ko01000				Bacteria	1TPB4@1239,3F3RN@33958,4HAN8@91061,COG1012@1,COG1012@2,COG1454@1,COG1454@2	NA|NA|NA	C	belongs to the iron- containing alcohol dehydrogenase family
PAKBJLMI_00125	272621.LBA0462	0.0	1187.2	Lactobacillaceae	glmS	GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016020,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0040007,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:0071944,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576	2.6.1.16	ko:K00820	ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931		R00768	RC00010,RC00163,RC02752	ko00000,ko00001,ko01000,ko01002			iNJ661.Rv3436c,iSB619.SA_RS11245,iYO844.BSU01780	Bacteria	1TPGU@1239,3F467@33958,4H9R4@91061,COG0449@1,COG0449@2	NA|NA|NA	M	Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
PAKBJLMI_00126	272621.LBA0463	7.3e-225	786.2	Lactobacillaceae	ackA	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464	2.7.2.1	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	M00357,M00579	R00315,R01353	RC00002,RC00043	ko00000,ko00001,ko00002,ko01000			iNJ661.Rv0409	Bacteria	1TQ22@1239,3F48Z@33958,4HA7K@91061,COG0282@1,COG0282@2	NA|NA|NA	F	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PAKBJLMI_00127	272621.LBA0464	1.3e-136	492.3	Lactobacillaceae			4.1.1.44	ko:K01607	ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220		R03470	RC00938	ko00000,ko00001,ko01000				Bacteria	1TQGP@1239,3FBCM@33958,4HH3D@91061,COG0599@1,COG0599@2	NA|NA|NA	S	Carboxymuconolactone decarboxylase family
PAKBJLMI_00128	272621.LBA0465	2.1e-70	271.6	Lactobacillaceae	apfA		2.7.7.72,3.6.1.61	ko:K00974,ko:K18445	ko00230,ko03013,map00230,map03013		R00184,R09382,R09383,R09384,R09386	RC00002,RC00078	ko00000,ko00001,ko01000,ko03016				Bacteria	1VAMK@1239,3F6NU@33958,4HKCB@91061,COG1051@1,COG1051@2	NA|NA|NA	F	Nudix hydrolase
PAKBJLMI_00129	272621.LBA0466	0.0	1135.9	Lactobacillaceae	pckA		4.1.1.49	ko:K01610	ko00010,ko00020,ko00620,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00710,map01100,map01110,map01120,map01130,map01200	M00003,M00170	R00341	RC00002,RC02741	ko00000,ko00001,ko00002,ko01000				Bacteria	1TPXB@1239,3F4N4@33958,4IS6N@91061,COG1866@1,COG1866@2	NA|NA|NA	H	Phosphoenolpyruvate carboxykinase
PAKBJLMI_00130	272621.LBA0468	0.0	1175.6	Lactobacillaceae													Bacteria	1V2H3@1239,28PUF@1,2ZCFF@2,3F3KN@33958,4HRKS@91061	NA|NA|NA	S	TerB-C domain
PAKBJLMI_00131	272621.LBA0469	1.4e-253	881.7	Lactobacillaceae													Bacteria	1TQPH@1239,3F54M@33958,4HCUW@91061,COG1135@1,COG1135@2	NA|NA|NA	P	P-loop Domain of unknown function (DUF2791)
PAKBJLMI_00132	272621.LBA0470	0.0	1524.2	Lactobacillaceae	lhr			ko:K03724					ko00000,ko01000,ko03400				Bacteria	1UHYQ@1239,3F42E@33958,4HD4E@91061,COG1201@1,COG1201@2	NA|NA|NA	L	DEAD DEAH box helicase
PAKBJLMI_00133	272621.LBA0471	4.3e-62	243.8	Lactobacillaceae													Bacteria	1U61M@1239,29P2Q@1,30A0W@2,3F6U2@33958,4IFQH@91061	NA|NA|NA		
PAKBJLMI_00134	272621.LBA0473	7.1e-231	806.2	Lactobacillaceae	amtB			ko:K03320					ko00000,ko02000	1.A.11			Bacteria	1TQYG@1239,3F3X1@33958,4HBGK@91061,COG0004@1,COG0004@2	NA|NA|NA	P	ammonium transporter
PAKBJLMI_00135	272621.LBA0474	6.8e-144	516.5	Lactobacillaceae	nfrA		1.5.1.38,1.5.1.39	ko:K19285,ko:K19286	ko00740,ko01100,map00740,map01100		R05705,R05706	RC00126	ko00000,ko00001,ko01000				Bacteria	1UB8S@1239,3F4IY@33958,4HEGP@91061,COG0778@1,COG0778@2	NA|NA|NA	C	nitroreductase
PAKBJLMI_00137	272621.LBA0475	0.0	2920.6	Lactobacillaceae													Bacteria	1U2DR@1239,3F4F5@33958,4HBX2@91061,COG1061@1,COG1061@2	NA|NA|NA	L	Type III restriction enzyme, res subunit
PAKBJLMI_00138	272621.LBA0476	2.5e-267	927.5	Lactobacillaceae				ko:K06926					ko00000				Bacteria	1UY2I@1239,3F7NU@33958,4HMMX@91061,COG1106@1,COG1106@2	NA|NA|NA	S	AAA ATPase domain
PAKBJLMI_00139	272621.LBA0476	2.8e-48	197.6	Lactobacillaceae				ko:K06926					ko00000				Bacteria	1UY2I@1239,3F7NU@33958,4HMMX@91061,COG1106@1,COG1106@2	NA|NA|NA	S	AAA ATPase domain
PAKBJLMI_00140	272621.LBA0477	2.9e-106	391.3	Lactobacillaceae	dam2		2.1.1.72	ko:K06223	ko03430,map03430				ko00000,ko00001,ko01000,ko02048,ko03032,ko03400				Bacteria	1TPCA@1239,3F6E1@33958,4HF2A@91061,COG0338@1,COG0338@2	NA|NA|NA	L	DNA methyltransferase
PAKBJLMI_00141	272621.LBA0477	1.7e-26	124.8	Lactobacillaceae	dam2		2.1.1.72	ko:K06223	ko03430,map03430				ko00000,ko00001,ko01000,ko02048,ko03032,ko03400				Bacteria	1TPCA@1239,3F6E1@33958,4HF2A@91061,COG0338@1,COG0338@2	NA|NA|NA	L	DNA methyltransferase
PAKBJLMI_00142	272621.LBA0478	7.1e-124	449.9	Lactobacillaceae			2.1.1.72	ko:K03427					ko00000,ko01000,ko02048				Bacteria	1V86D@1239,3F7IT@33958,4HJKH@91061,COG0286@1,COG0286@2	NA|NA|NA	V	site-specific DNA-methyltransferase (adenine-specific) activity
PAKBJLMI_00144	272621.LBA0480	6.3e-57	226.5	Lactobacillaceae													Bacteria	1U8CR@1239,29QNI@1,30BN6@2,3FAUC@33958,4IIAQ@91061	NA|NA|NA		
PAKBJLMI_00145	272621.LBA0481	1.9e-211	741.5	Lactobacillaceae													Bacteria	1UZV0@1239,3F46N@33958,4HCE6@91061,COG1674@1,COG1674@2	NA|NA|NA	D	COG1674 DNA segregation ATPase FtsK SpoIIIE and related proteins
PAKBJLMI_00147	272621.LBA0483	7.7e-186	656.4	Lactobacillaceae	repB			ko:K02031,ko:K02032,ko:K15269,ko:K15583	ko01501,ko02010,ko02024,map01501,map02010,map02024	M00239,M00439			ko00000,ko00001,ko00002,ko02000	2.A.7.3.3,3.A.1.5,3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25			Bacteria	1V4H8@1239,3F4EP@33958,4HRZY@91061,COG0444@1,COG0444@2	NA|NA|NA	EP	Plasmid replication protein
PAKBJLMI_00148	525365.HMPREF0548_0511	2.8e-12	77.4	Lactobacillaceae													Bacteria	1U6UK@1239,29PP2@1,30AM8@2,3F8ID@33958,4IGNE@91061	NA|NA|NA		
PAKBJLMI_00149	272621.LBA0484	4.9e-229	800.0	Lactobacillaceae				ko:K03733,ko:K04763					ko00000,ko03036				Bacteria	1U59Y@1239,3F5BK@33958,4IF1G@91061,COG0582@1,COG0582@2	NA|NA|NA	L	Belongs to the 'phage' integrase family
PAKBJLMI_00150	272621.LBA0486	1.3e-69	268.9	Lactobacillaceae													Bacteria	1U5KS@1239,2F916@1,309SE@2,3F65Y@33958,4IFBR@91061	NA|NA|NA	S	Iron-sulphur cluster biosynthesis
PAKBJLMI_00151	272621.LBA0487	5.1e-33	146.4	Lactobacillaceae													Bacteria	1U6T5@1239,2C7HR@1,30AK4@2,3F8FZ@33958,4IGKW@91061	NA|NA|NA		
PAKBJLMI_00152	272621.LBA0488	5.9e-67	260.0	Lactobacillaceae													Bacteria	1U643@1239,2C7EH@1,30A2S@2,3F6ZP@33958,4IFTN@91061	NA|NA|NA		
PAKBJLMI_00153	272621.LBA0489	3.1e-172	610.9	Lactobacillaceae	pphA		3.1.3.16	ko:K01090,ko:K07313					ko00000,ko01000				Bacteria	1V1HN@1239,3F401@33958,4HF40@91061,COG0639@1,COG0639@2	NA|NA|NA	T	Calcineurin-like phosphoesterase
PAKBJLMI_00154	272621.LBA0490	5.6e-13	79.0	Lactobacillaceae													Bacteria	1U6Y4@1239,29PR7@1,30APF@2,3F8PS@33958,4IGSA@91061	NA|NA|NA		
PAKBJLMI_00155	272621.LBA0491	2.1e-252	877.9	Lactobacillaceae	celB			ko:K02761	ko00500,ko02060,map00500,map02060	M00275	R11170,R11172	RC00017,RC03206	ko00000,ko00001,ko00002,ko02000	4.A.3.2		iYO844.BSU38390	Bacteria	1TP8D@1239,3F3Q4@33958,4H9W2@91061,COG1455@1,COG1455@2	NA|NA|NA	G	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PAKBJLMI_00156	272621.LBA0492	2.5e-161	574.7	Lactobacillaceae													Bacteria	1TPCZ@1239,3F4I6@33958,4HC7A@91061,COG0826@1,COG0826@2	NA|NA|NA	O	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
PAKBJLMI_00157	272621.LBA0493	7.8e-70	270.4	Lactobacillaceae													Bacteria	1V773@1239,3F3JQ@33958,4HIJG@91061,COG1388@1,COG1388@2	NA|NA|NA	M	LysM domain protein
PAKBJLMI_00158	272621.LBA0494	4.1e-195	687.2	Lactobacillaceae													Bacteria	1U570@1239,3F4ZJ@33958,4IEYI@91061,COG1196@1,COG1196@2	NA|NA|NA	D	nuclear chromosome segregation
PAKBJLMI_00159	272621.LBA0495	4.9e-110	403.7	Lactobacillaceae			5.4.2.11	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	M00001,M00002,M00003	R01518	RC00536	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147				Bacteria	1UXY8@1239,3F4JB@33958,4HFD9@91061,COG0406@1,COG0406@2	NA|NA|NA	G	Phosphoglycerate mutase family
PAKBJLMI_00160	272621.LBA0496	6.6e-107	393.3	Lactobacillaceae			5.4.2.11	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	M00001,M00002,M00003	R01518	RC00536	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147				Bacteria	1V4Y8@1239,3F5FJ@33958,4IF2Q@91061,COG0406@1,COG0406@2	NA|NA|NA	G	Histidine phosphatase superfamily (branch 1)
PAKBJLMI_00161	272621.LBA0497	1e-119	436.0	Lactobacillaceae	VY92_08690		5.3.1.32	ko:K11530	ko02024,map02024				ko00000,ko00001,ko01000				Bacteria	1VVR5@1239,3F5NS@33958,4HWFJ@91061,COG1359@1,COG1359@2	NA|NA|NA	G	Antibiotic biosynthesis monooxygenase
PAKBJLMI_00162	272621.LBA0498	5.4e-52	209.9	Lactobacillaceae	glpQ		3.1.4.46	ko:K01126	ko00564,map00564		R01030,R01470	RC00017,RC00425	ko00000,ko00001,ko01000				Bacteria	1V3W4@1239,3F4E3@33958,4HFNQ@91061,COG0584@1,COG0584@2	NA|NA|NA	C	glycerophosphoryl diester phosphodiesterase
PAKBJLMI_00163	272621.LBA0500	3.9e-184	650.6	Lactobacillaceae	msmR			ko:K02529,ko:K03484					ko00000,ko03000				Bacteria	1TS26@1239,3F5MU@33958,4IPN9@91061,COG1609@1,COG1609@2	NA|NA|NA	K	helix_turn _helix lactose operon repressor
PAKBJLMI_00164	272621.LBA0502	2.7e-249	867.5	Bacilli				ko:K02027,ko:K10120,ko:K15770	ko02010,map02010	M00197,M00207,M00491			ko00000,ko00001,ko00002,ko02000	3.A.1.1,3.A.1.1.16,3.A.1.1.2,3.A.1.1.20			Bacteria	1UIVF@1239,4ISTE@91061,COG2182@1,COG2182@2	NA|NA|NA	G	Bacterial extracellular solute-binding protein
PAKBJLMI_00165	272621.LBA0503	4.5e-163	580.5	Lactobacillaceae	msmF			ko:K02025,ko:K10118,ko:K10121,ko:K15771	ko02010,map02010	M00196,M00197,M00207,M00491			ko00000,ko00001,ko00002,ko02000	3.A.1.1,3.A.1.1.16,3.A.1.1.2,3.A.1.1.20,3.A.1.1.28			Bacteria	1TREE@1239,3F464@33958,4HCD0@91061,COG1175@1,COG1175@2	NA|NA|NA	P	ABC-type sugar transport systems, permease components
PAKBJLMI_00166	272621.LBA0504	3.3e-155	554.3	Lactobacillaceae	msmG			ko:K02026,ko:K10122		M00197,M00207			ko00000,ko00002,ko02000	3.A.1.1,3.A.1.1.20			Bacteria	1UCH2@1239,3F3N5@33958,4HECV@91061,COG0395@1,COG0395@2	NA|NA|NA	G	Binding-protein-dependent transport system inner membrane component
PAKBJLMI_00167	272621.LBA0505	7.3e-230	802.7	Lactobacillaceae	sacA		3.2.1.26	ko:K01193	ko00052,ko00500,ko01100,map00052,map00500,map01100		R00801,R00802,R02410,R03635,R03921,R06088	RC00028,RC00077	ko00000,ko00001,ko01000		GH32		Bacteria	1TPAE@1239,3F49X@33958,4H9Y7@91061,COG1621@1,COG1621@2	NA|NA|NA	G	Glycosyl hydrolases family 32
PAKBJLMI_00168	272621.LBA0506	6.5e-212	743.0	Lactobacillaceae	msmX			ko:K10112	ko02010,map02010	M00194,M00196,M00197,M00200,M00201,M00206,M00207,M00491,M00602,M00605,M00606			ko00000,ko00001,ko00002,ko02000	3.A.1.1			Bacteria	1TP2M@1239,3FC3D@33958,4HAMQ@91061,COG3842@1,COG3842@2	NA|NA|NA	P	Belongs to the ABC transporter superfamily
PAKBJLMI_00169	272621.LBA0507	2.6e-285	987.3	Lactobacillaceae	gtfA	GO:0003674,GO:0003824,GO:0004645,GO:0009018,GO:0016740,GO:0016757,GO:0016758	2.4.1.7	ko:K00690	ko00500,map00500		R00803	RC00028	ko00000,ko00001,ko01000		GH13		Bacteria	1TR93@1239,3F3YR@33958,4HEKC@91061,COG0366@1,COG0366@2	NA|NA|NA	G	Sucrose glucosyltransferase
PAKBJLMI_00170	272621.LBA0508	6.1e-70	270.0	Lactobacillaceae													Bacteria	1TSUK@1239,3F3S1@33958,4H9X7@91061,COG0477@1,COG2814@2	NA|NA|NA	EGP	Major facilitator Superfamily
PAKBJLMI_00172	272621.LBA0510	4.9e-177	627.1	Lactobacillaceae	pfoS			ko:K07035					ko00000				Bacteria	1TS5F@1239,3FCB3@33958,4HC4N@91061,COG3641@1,COG3641@2	NA|NA|NA	S	Phosphotransferase system, EIIC
PAKBJLMI_00173	272621.LBA0512	3.9e-276	956.8	Lactobacillaceae	slpX												Bacteria	1U50G@1239,2DKHC@1,309G6@2,3F3S2@33958,4IESF@91061	NA|NA|NA	S	SLAP domain
PAKBJLMI_00176	272621.LBA0515	4e-209	733.8	Lactobacillaceae													Bacteria	1U569@1239,29NKT@1,309IS@2,3F4WR@33958,4IEXJ@91061	NA|NA|NA		
PAKBJLMI_00177	272621.LBA0516	2.5e-121	441.4	Lactobacillaceae	gntR1			ko:K03710,ko:K11922					ko00000,ko03000				Bacteria	1UYBW@1239,3FC8N@33958,4IPQD@91061,COG2188@1,COG2188@2	NA|NA|NA	K	UTRA
PAKBJLMI_00178	272621.LBA0518	1.5e-70	271.9	Lactobacillaceae	tagD		2.7.7.15,2.7.7.39	ko:K00968,ko:K00980	ko00440,ko00564,ko01100,ko05231,map00440,map00564,map01100,map05231	M00090	R00856,R01890,R02590	RC00002	ko00000,ko00001,ko00002,ko01000				Bacteria	1V3KY@1239,3F65R@33958,4HGWZ@91061,COG0615@1,COG0615@2	NA|NA|NA	IM	Glycerol-3-phosphate cytidylyltransferase
PAKBJLMI_00179	272621.LBA0519	8e-134	483.0	Lactobacillaceae	tagA		2.4.1.187	ko:K05946	ko05111,map05111				ko00000,ko00001,ko01000,ko01003		GT26		Bacteria	1V3QV@1239,3F4WB@33958,4HH6B@91061,COG1922@1,COG1922@2	NA|NA|NA	F	Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
PAKBJLMI_00180	272621.LBA0520	1.1e-206	725.7	Lactobacillaceae	csaB												Bacteria	1UHSF@1239,3F428@33958,4HB04@91061,COG0438@1,COG0438@2	NA|NA|NA	M	Glycosyl transferases group 1
PAKBJLMI_00181	272621.LBA0521	1.4e-286	991.5	Lactobacillaceae	pncB	GO:0001666,GO:0003674,GO:0003824,GO:0004516,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009605,GO:0009607,GO:0009628,GO:0009987,GO:0016020,GO:0016740,GO:0016757,GO:0016763,GO:0016874,GO:0016879,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019365,GO:0019438,GO:0019637,GO:0019674,GO:0034355,GO:0034641,GO:0034654,GO:0036293,GO:0043094,GO:0043173,GO:0043207,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044403,GO:0044419,GO:0044464,GO:0046483,GO:0046496,GO:0047280,GO:0050896,GO:0051186,GO:0051188,GO:0051701,GO:0051704,GO:0051707,GO:0055086,GO:0070482,GO:0071704,GO:0071944,GO:0072524,GO:0072525,GO:0075136,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	6.3.4.21	ko:K00763	ko00760,ko01100,map00760,map01100		R01724	RC00033	ko00000,ko00001,ko01000			iYO844.BSU31750	Bacteria	1TPDW@1239,3F3K7@33958,4HAI4@91061,COG1488@1,COG1488@2	NA|NA|NA	F	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PAKBJLMI_00182	272621.LBA0522	6.1e-154	550.1	Lactobacillaceae	nadE	GO:0003674,GO:0003824,GO:0003952,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008795,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016874,GO:0016879,GO:0016880,GO:0016884,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019365,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0033554,GO:0034355,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043094,GO:0043173,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046496,GO:0050896,GO:0051186,GO:0051188,GO:0051716,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605	6.3.1.5	ko:K01916	ko00760,ko01100,map00760,map01100	M00115	R00189	RC00100	ko00000,ko00001,ko00002,ko01000			iECSE_1348.ECSE_1910,iECW_1372.ECW_m1909,iEKO11_1354.EKO11_2035,iETEC_1333.ETEC_1772,iEcE24377_1341.EcE24377A_1961,iSFV_1184.SFV_1480,iSF_1195.SF1486,iSFxv_1172.SFxv_1676,iSSON_1240.SSON_1418,iS_1188.S1603,iWFL_1372.ECW_m1909	Bacteria	1TQ38@1239,3F43Z@33958,4HA2R@91061,COG0171@1,COG0171@2	NA|NA|NA	F	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
PAKBJLMI_00183	272621.LBA0523	0.0	1697.6	Lactobacillaceae	pacL		3.6.3.8	ko:K01537					ko00000,ko01000	3.A.3.2			Bacteria	1TPF5@1239,3F3KP@33958,4H9S5@91061,COG0474@1,COG0474@2	NA|NA|NA	P	P-type ATPase
PAKBJLMI_00184	272621.LBA0524	2.9e-226	790.8	Lactobacillaceae													Bacteria	1VD8C@1239,3F52X@33958,4HI8C@91061,COG1887@1,COG1887@2	NA|NA|NA	M	CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
PAKBJLMI_00185	272621.LBA0525	1.1e-256	892.1	Lactobacillaceae	epsU												Bacteria	1TRTX@1239,3FB7P@33958,4HDWM@91061,COG2244@1,COG2244@2	NA|NA|NA	S	Polysaccharide biosynthesis protein
PAKBJLMI_00186	272621.LBA0526	9.7e-137	492.7	Lactobacillaceae													Bacteria	1V9J7@1239,3F4U2@33958,4HIAM@91061,COG3774@1,COG3774@2	NA|NA|NA	M	Glycosyltransferase sugar-binding region containing DXD motif
PAKBJLMI_00187	891391.LAC30SC_02745	4.3e-64	250.8	Lactobacillaceae	ydcK			ko:K03095					ko00000				Bacteria	1V6NU@1239,3F703@33958,4HIHY@91061,COG3091@1,COG3091@2	NA|NA|NA	S	Belongs to the SprT family
PAKBJLMI_00189	272621.LBA0527	2.8e-114	417.9	Lactobacillaceae	acmC		3.2.1.17,3.2.1.96	ko:K01185,ko:K01227,ko:K02395	ko00511,map00511				ko00000,ko00001,ko01000,ko02035				Bacteria	1V7JY@1239,3F584@33958,4HIY4@91061,COG1705@1,COG1705@2	NA|NA|NA	NU	mannosyl-glycoprotein
PAKBJLMI_00190	272621.LBA0528	0.0	1469.1	Lactobacillaceae	pcrA		3.6.4.12	ko:K03657	ko03420,ko03430,map03420,map03430				ko00000,ko00001,ko01000,ko03400				Bacteria	1TPSU@1239,3F400@33958,4HB12@91061,COG0210@1,COG0210@2	NA|NA|NA	L	ATP-dependent DNA helicase
PAKBJLMI_00191	272621.LBA0529	0.0	1322.4	Lactobacillaceae	ligA	GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360	6.5.1.2	ko:K01972	ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430		R00382	RC00005	ko00000,ko00001,ko01000,ko03032,ko03400				Bacteria	1TPQ3@1239,3F43C@33958,4HA1D@91061,COG0272@1,COG0272@2	NA|NA|NA	L	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
PAKBJLMI_00192	272621.LBA0530	1.1e-201	709.1	Lactobacillaceae	camS												Bacteria	1TSYE@1239,3F3KI@33958,4HBI8@91061,COG4851@1,COG4851@2	NA|NA|NA	S	sex pheromone
PAKBJLMI_00193	272621.LBA0531	2.6e-49	201.1	Lactobacillaceae	gatC		6.3.5.6,6.3.5.7	ko:K02435	ko00970,ko01100,map00970,map01100		R03905,R04212	RC00010	ko00000,ko00001,ko01000,ko03029			iAF987.Gmet_0076	Bacteria	1VEK3@1239,3F7XB@33958,4HNNA@91061,COG0721@1,COG0721@2	NA|NA|NA	J	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PAKBJLMI_00194	272621.LBA0532	5.8e-261	906.4	Lactobacillaceae	gatA		6.3.5.6,6.3.5.7	ko:K02433	ko00970,ko01100,map00970,map01100		R03905,R04212	RC00010	ko00000,ko00001,ko01000,ko03029				Bacteria	1TP0C@1239,3F4BK@33958,4HBAZ@91061,COG0154@1,COG0154@2	NA|NA|NA	J	Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
PAKBJLMI_00195	272621.LBA0533	1.9e-275	954.5	Lactobacillaceae	gatB	GO:0003674,GO:0003824,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016879,GO:0016884,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0050567,GO:0070681,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564	6.1.1.12,6.3.5.6,6.3.5.7	ko:K01876,ko:K02434	ko00970,ko01100,map00970,map01100	M00359,M00360	R03905,R04212,R05577	RC00010,RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029				Bacteria	1TPG3@1239,3F44H@33958,4HAFB@91061,COG0064@1,COG0064@2	NA|NA|NA	J	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PAKBJLMI_00196	272621.LBA0534	4.2e-172	610.5	Lactobacillaceae	yegS	GO:0001727,GO:0003674,GO:0003824,GO:0004143,GO:0006629,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0030258,GO:0044237,GO:0044238,GO:0044255,GO:0046834,GO:0071704	2.7.1.107	ko:K07029	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110		R02240	RC00002,RC00017	ko00000,ko00001,ko01000				Bacteria	1TQAU@1239,3F447@33958,4H9WD@91061,COG1597@1,COG1597@2	NA|NA|NA	G	Lipid kinase
PAKBJLMI_00197	525365.HMPREF0548_0570	2.2e-112	411.8	Lactobacillaceae	ybhL	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944		ko:K06890					ko00000				Bacteria	1V779@1239,3F3QH@33958,4HIX1@91061,COG0670@1,COG0670@2	NA|NA|NA	S	Belongs to the BI1 family
PAKBJLMI_00198	272621.LBA0537	4.1e-56	223.8	Lactobacillaceae													Bacteria	1UQJZ@1239,2BQGU@1,32JC9@2,3F6M4@33958,4IFJT@91061	NA|NA|NA		
PAKBJLMI_00199	272621.LBA0538	1.5e-245	855.1	Lactobacillaceae	nhaC			ko:K03315					ko00000,ko02000	2.A.35			Bacteria	1TQ3B@1239,3F3VX@33958,4HA18@91061,COG1757@1,COG1757@2	NA|NA|NA	C	Na H antiporter NhaC
PAKBJLMI_00200	272621.LBA0539	9.6e-258	895.6	Lactobacillaceae	rumA	GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016436,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070041,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360	2.1.1.190	ko:K03215					ko00000,ko01000,ko03009				Bacteria	1TP4H@1239,3F41R@33958,4HA6M@91061,COG2265@1,COG2265@2	NA|NA|NA	J	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PAKBJLMI_00201	748671.LCRIS_01222	1.6e-22	111.3	Lactobacillaceae													Bacteria	1VUSY@1239,2AYWY@1,3354X@2,3FC0S@33958,4HVEY@91061	NA|NA|NA		
PAKBJLMI_00202	272621.LBA0540	1.1e-62	245.7	Lactobacillaceae													Bacteria	1U7I5@1239,2AYWY@1,30B43@2,3F9R2@33958,4IHET@91061	NA|NA|NA		
PAKBJLMI_00203	272621.LBA0541	0.0	1164.8	Lactobacillaceae	cadA		3.6.3.3,3.6.3.5	ko:K01534					ko00000,ko01000	3.A.3.6			Bacteria	1TQ07@1239,3FC0Y@33958,4HT7C@91061,COG2217@1,COG2217@2	NA|NA|NA	P	E1-E2 ATPase
PAKBJLMI_00204	272621.LBA0542	3.9e-34	150.2	Lactobacillaceae	copZ			ko:K07213	ko04978,map04978				ko00000,ko00001				Bacteria	1VK5F@1239,3FBN8@33958,4IRA3@91061,COG2608@1,COG2608@2	NA|NA|NA	C	Heavy-metal-associated domain
PAKBJLMI_00205	272621.LBA0543	5e-96	357.1	Lactobacillaceae	dps			ko:K04047					ko00000,ko03036				Bacteria	1VB1X@1239,3F4SN@33958,4HMJG@91061,COG0783@1,COG0783@2	NA|NA|NA	P	Belongs to the Dps family
PAKBJLMI_00206	272621.LBA0544	8.1e-114	416.4	Lactobacillaceae	rcfA		4.1.99.16,4.2.3.22,4.2.3.75	ko:K10187,ko:K21562	ko00909,ko01100,ko01110,map00909,map01100,map01110		R07647,R07648,R08543,R09487	RC01832,RC02159,RC02160,RC02183,RC02425,RC02552	ko00000,ko00001,ko01000,ko03000				Bacteria	1V3XW@1239,3F4YM@33958,4HDG1@91061,COG0664@1,COG0664@2	NA|NA|NA	K	Transcriptional regulator, Crp Fnr family
PAKBJLMI_00207	272621.LBA0545	2.8e-113	414.5	Lactobacillaceae	ung2		3.2.2.27	ko:K21929	ko03410,map03410				ko00000,ko00001,ko01000,ko03400				Bacteria	1V1F8@1239,3F4WH@33958,4HFVS@91061,COG1573@1,COG1573@2	NA|NA|NA	L	Uracil-DNA glycosylase
PAKBJLMI_00208	1133569.AHYZ01000062_gene1498	1.2e-48	199.1	Lactobacillaceae			5.1.1.13	ko:K01779	ko00250,ko01054,map00250,map01054		R00491	RC00302	ko00000,ko00001,ko01000			iHN637.CLJU_RS14520	Bacteria	1TR3U@1239,3F6H8@33958,4HCAN@91061,COG1794@1,COG1794@2	NA|NA|NA	M	Asp/Glu/Hydantoin racemase
PAKBJLMI_00209	272621.LBA0546	6.5e-57	226.5	Lactobacillaceae			5.1.1.13	ko:K01779	ko00250,ko01054,map00250,map01054		R00491	RC00302	ko00000,ko00001,ko01000			iHN637.CLJU_RS14520	Bacteria	1TR3U@1239,3F6H8@33958,4HCAN@91061,COG1794@1,COG1794@2	NA|NA|NA	M	Asp/Glu/Hydantoin racemase
PAKBJLMI_00210	272621.LBA0547	9e-192	676.0	Lactobacillaceae				ko:K06400					ko00000				Bacteria	1TPBH@1239,3F590@33958,4IPTE@91061,COG1961@1,COG1961@2	NA|NA|NA	L	Recombinase
PAKBJLMI_00211	272621.LBA0548	7.8e-94	349.7	Lactobacillaceae				ko:K06400					ko00000				Bacteria	1TPBH@1239,3F8K3@33958,4IGPN@91061,COG1961@1,COG1961@2	NA|NA|NA	L	Resolvase, N terminal domain
PAKBJLMI_00212	272621.LBA0549	1.4e-178	632.1	Lactobacillaceae													Bacteria	1TPBH@1239,3F4SH@33958,4IQ08@91061,COG1961@1,COG1961@2	NA|NA|NA	L	Recombinase zinc beta ribbon domain
PAKBJLMI_00213	272621.LBA0551	6.6e-95	353.2	Lactobacillaceae	MA20_25245												Bacteria	1VJPU@1239,3F5MH@33958,4HG6J@91061,COG0454@1,COG0456@2	NA|NA|NA	K	Acetyltransferase (GNAT) domain
PAKBJLMI_00218	272621.LBA0552	3.9e-244	850.5	Lactobacillaceae	emrY												Bacteria	1VSW8@1239,3F4AW@33958,4HUQC@91061,COG0477@1,COG2814@2	NA|NA|NA	EGP	Major facilitator Superfamily
PAKBJLMI_00219	272621.LBA0553	6.8e-136	490.0	Lactobacillaceae				ko:K07052					ko00000				Bacteria	1W74F@1239,3F8VV@33958,4IGWQ@91061,COG1266@1,COG1266@2	NA|NA|NA	S	CAAX protease self-immunity
PAKBJLMI_00220	272621.LBA0554	5e-90	337.0	Lactobacillaceae	yxdD												Bacteria	1VM8R@1239,3F63U@33958,4HRXE@91061,COG1309@1,COG1309@2	NA|NA|NA	K	Bacterial regulatory proteins, tetR family
PAKBJLMI_00221	272621.LBA0555	0.0	1204.5	Lactobacillaceae			4.2.1.53	ko:K10254					ko00000,ko01000				Bacteria	1TQZ6@1239,3F3QX@33958,4HAYH@91061,COG4716@1,COG4716@2	NA|NA|NA	S	Myosin-crossreactive antigen
PAKBJLMI_00222	272621.LBA0556	8.4e-78	296.2	Lactobacillaceae			2.3.1.128	ko:K03789					ko00000,ko01000,ko03009				Bacteria	1VEW7@1239,3F5HK@33958,4HPE4@91061,COG0454@1,COG0456@2	NA|NA|NA	K	acetyltransferase
PAKBJLMI_00223	272621.LBA0558	1.8e-161	575.1	Lactobacillaceae													Bacteria	1TPM1@1239,3FB4Q@33958,4H9XJ@91061,COG0656@1,COG0656@2	NA|NA|NA	S	reductase
PAKBJLMI_00224	272621.LBA0559	3.6e-109	401.0	Lactobacillaceae				ko:K06147					ko00000,ko02000	3.A.1.106,3.A.1.109,3.A.1.21			Bacteria	1TSRV@1239,3F46B@33958,4HCIZ@91061,COG1132@1,COG1132@2	NA|NA|NA	V	ABC-type multidrug transport system, ATPase and permease components
PAKBJLMI_00225	272621.LBA0560	5.1e-128	463.8	Bacteria	cydD			ko:K06148					ko00000,ko02000	3.A.1			Bacteria	COG4988@1,COG4988@2	NA|NA|NA	V	cysteine transport
PAKBJLMI_00226	272621.LBA0562	2.1e-241	841.3	Lactobacillaceae	pyrP			ko:K02824,ko:K16169					ko00000,ko02000	2.A.40.1.1,2.A.40.1.2,2.A.40.3.1		iLJ478.TM0819	Bacteria	1TQKX@1239,3F3UJ@33958,4HAEU@91061,COG2233@1,COG2233@2	NA|NA|NA	F	Permease
PAKBJLMI_00227	272621.LBA0563	9.5e-92	342.8	Lactobacillaceae	pyrR		2.4.2.9	ko:K02825	ko00240,ko01100,map00240,map01100		R00966	RC00063	ko00000,ko00001,ko01000,ko03000				Bacteria	1V3GV@1239,3F4MT@33958,4HGYE@91061,COG2065@1,COG2065@2	NA|NA|NA	F	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
PAKBJLMI_00228	1423767.BALU01000015_gene1888	1.5e-86	325.5	Lactobacillaceae			3.1.3.102,3.1.3.104	ko:K20861	ko00740,ko01100,ko01110,map00740,map01100,map01110	M00125	R00548,R07280	RC00017	ko00000,ko00001,ko00002,ko01000				Bacteria	1UYU8@1239,3F4WW@33958,4HE0K@91061,COG0561@1,COG0561@2	NA|NA|NA	S	Sucrose-6F-phosphate phosphohydrolase
PAKBJLMI_00229	272621.LBA0565	2.4e-50	204.5	Bacteria			3.1.3.102,3.1.3.104	ko:K20861	ko00740,ko01100,ko01110,map00740,map01100,map01110	M00125	R00548,R07280	RC00017	ko00000,ko00001,ko00002,ko01000				Bacteria	COG0561@1,COG0561@2	NA|NA|NA	Q	phosphatase activity
PAKBJLMI_00230	272621.LBA0566	1.6e-253	881.7	Lactobacillaceae	emrY												Bacteria	1VSW8@1239,3F4AW@33958,4HUQC@91061,COG0477@1,COG2814@2	NA|NA|NA	EGP	Major facilitator Superfamily
PAKBJLMI_00231	272621.LBA0567	4e-215	753.8	Lactobacillaceae	mdtG	GO:0006810,GO:0006855,GO:0008150,GO:0015893,GO:0042221,GO:0042493,GO:0050896,GO:0051179,GO:0051234,GO:0055085		ko:K08161					ko00000,ko02000	2.A.1.2.20			Bacteria	1TRDJ@1239,3FCA7@33958,4H9UE@91061,COG0477@1,COG2814@2	NA|NA|NA	EGP	Major facilitator Superfamily
PAKBJLMI_00232	272621.LBA0568	1.8e-165	588.6	Lactobacillaceae	mleP3			ko:K07088					ko00000				Bacteria	1UY4N@1239,3FBIX@33958,4HEPU@91061,COG0679@1,COG0679@2	NA|NA|NA	S	Membrane transport protein
PAKBJLMI_00233	272621.LBA0569	2.1e-210	738.0	Lactobacillaceae	pepA												Bacteria	1TNZT@1239,3F55I@33958,4H9SM@91061,COG1363@1,COG1363@2	NA|NA|NA	E	M42 glutamyl aminopeptidase
PAKBJLMI_00234	272621.LBA0570	0.0	1076.2	Lactobacillaceae	ybiT	GO:0006950,GO:0008150,GO:0009266,GO:0009409,GO:0009628,GO:0050896		ko:K06158					ko00000,ko03012				Bacteria	1TPW0@1239,3F3ZJ@33958,4HATH@91061,COG0488@1,COG0488@2	NA|NA|NA	S	ABC transporter, ATP-binding protein
PAKBJLMI_00235	272621.LBA0571	9.8e-146	522.7	Lactobacillaceae													Bacteria	1U538@1239,29NJ9@1,309H6@2,3F4AG@33958,4IEUK@91061	NA|NA|NA		
PAKBJLMI_00236	272621.LBA0572	9e-150	536.2	Lactobacillaceae	glnH			ko:K10039	ko02010,map02010	M00228			ko00000,ko00001,ko00002,ko02000	3.A.1.3			Bacteria	1TT11@1239,3FC55@33958,4HBM1@91061,COG0834@1,COG0834@2	NA|NA|NA	ET	ABC transporter
PAKBJLMI_00237	272621.LBA0573	2.3e-78	298.1	Lactobacillaceae													Bacteria	1VF1A@1239,3F705@33958,4HH6N@91061,COG1846@1,COG1846@2	NA|NA|NA	K	Transcriptional regulator, MarR family
PAKBJLMI_00238	272621.LBA0574	1.1e-306	1058.5	Lactobacillaceae	XK27_09600			ko:K06147,ko:K06148,ko:K18891	ko02010,map02010	M00708			ko00000,ko00001,ko00002,ko02000	3.A.1,3.A.1.106,3.A.1.109,3.A.1.135,3.A.1.21			Bacteria	1TP0B@1239,3F3SP@33958,4H9SC@91061,COG1132@1,COG1132@2	NA|NA|NA	V	ABC transporter, ATP-binding protein
PAKBJLMI_00239	272621.LBA0575	0.0	1120.5	Lactobacillaceae				ko:K06147,ko:K18892	ko02010,map02010	M00708			ko00000,ko00001,ko00002,ko02000	3.A.1.106,3.A.1.109,3.A.1.135,3.A.1.21			Bacteria	1UNRI@1239,3FC4R@33958,4HFD4@91061,COG1132@1,COG1132@2	NA|NA|NA	V	ABC transporter transmembrane region
PAKBJLMI_00240	272621.LBA0576	2.9e-102	377.9	Lactobacillaceae				ko:K16925		M00582			ko00000,ko00002,ko02000	3.A.1.30			Bacteria	1V39N@1239,3F4QM@33958,4HF32@91061,COG4721@1,COG4721@2	NA|NA|NA	S	ABC-type cobalt transport system, permease component
PAKBJLMI_00241	272621.LBA0577	7.2e-115	419.9	Lactobacillaceae	udk	GO:0003674,GO:0003824,GO:0004849,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006213,GO:0006220,GO:0006221,GO:0006222,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008655,GO:0009058,GO:0009112,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009173,GO:0009174,GO:0009218,GO:0009220,GO:0009224,GO:0009259,GO:0009260,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0043094,GO:0043097,GO:0043174,GO:0043771,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046035,GO:0046049,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659	2.7.1.48	ko:K00876	ko00240,ko00983,ko01100,map00240,map00983,map01100		R00513,R00516,R00517,R00962,R00964,R00967,R00968,R00970,R01548,R01549,R01880,R02091,R02096,R02097,R02327,R02332,R02371,R02372,R08232	RC00002,RC00017	ko00000,ko00001,ko01000			iSBO_1134.SBO_0893	Bacteria	1TQ4V@1239,3FCEB@33958,4IQTA@91061,COG0572@1,COG0572@2	NA|NA|NA	F	Zeta toxin
PAKBJLMI_00242	272621.LBA0578	7.4e-135	486.5	Lactobacillaceae	glnQ		3.6.3.21	ko:K02028,ko:K10041	ko02010,map02010	M00228,M00236			ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.3			Bacteria	1TNYD@1239,3F3QQ@33958,4H9WY@91061,COG1126@1,COG1126@2	NA|NA|NA	E	ABC transporter, ATP-binding protein
PAKBJLMI_00243	272621.LBA0579	1.3e-148	532.3	Lactobacillaceae	glnH			ko:K10039	ko02010,map02010	M00228			ko00000,ko00001,ko00002,ko02000	3.A.1.3			Bacteria	1TT11@1239,3F4GG@33958,4HAHV@91061,COG0834@1,COG0834@2	NA|NA|NA	ET	ABC transporter substrate-binding protein
PAKBJLMI_00244	272621.LBA0581	6.1e-93	347.1	Lactobacillaceae	gluC	GO:0003333,GO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006820,GO:0006865,GO:0008150,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015318,GO:0015711,GO:0015849,GO:0016020,GO:0022857,GO:0034220,GO:0044464,GO:0046942,GO:0046943,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098656,GO:1903825,GO:1905039		ko:K10006,ko:K10040	ko02010,map02010	M00228,M00233			ko00000,ko00001,ko00002,ko02000	3.A.1.3,3.A.1.3.9			Bacteria	1TQ5K@1239,3F3XW@33958,4HFBH@91061,COG0765@1,COG0765@2	NA|NA|NA	P	ABC transporter permease
PAKBJLMI_00245	272621.LBA0582	1.9e-110	405.2	Lactobacillaceae	glnP	GO:0003333,GO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006820,GO:0006865,GO:0008150,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015318,GO:0015711,GO:0015849,GO:0016020,GO:0022857,GO:0034220,GO:0044464,GO:0046942,GO:0046943,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098656,GO:1903825,GO:1905039		ko:K02029,ko:K10002,ko:K10040	ko02010,ko02020,map02010,map02020	M00228,M00230,M00236			ko00000,ko00001,ko00002,ko02000	3.A.1.3,3.A.1.3.19,3.A.1.3.4			Bacteria	1UJM4@1239,3F3WJ@33958,4HBAS@91061,COG0765@1,COG0765@2	NA|NA|NA	P	ABC transporter permease
PAKBJLMI_00246	272621.LBA0583	1.5e-174	618.6	Lactobacillaceae													Bacteria	1V6G9@1239,2CJHH@1,32SA1@2,3F5FF@33958,4HIZ6@91061	NA|NA|NA	S	Protein of unknown function (DUF2974)
PAKBJLMI_00247	272621.LBA0584	1.2e-63	249.2	Lactobacillaceae													Bacteria	1U6NF@1239,2C92N@1,30AH2@2,3F86Z@33958,4IGFE@91061	NA|NA|NA		
PAKBJLMI_00248	272621.LBA0585	4.8e-238	830.1	Lactobacillaceae				ko:K02027,ko:K05813	ko02010,map02010	M00198,M00207			ko00000,ko00001,ko00002,ko02000	3.A.1.1,3.A.1.1.3			Bacteria	1UNFN@1239,3FBF0@33958,4HCSA@91061,COG1653@1,COG1653@2	NA|NA|NA	G	Bacterial extracellular solute-binding protein
PAKBJLMI_00249	272621.LBA0586	4.1e-163	580.5	Lactobacillaceae			2.7.7.12	ko:K00965	ko00052,ko00520,ko01100,ko04917,map00052,map00520,map01100,map04917	M00362,M00554,M00632	R00955	RC00002	ko00000,ko00001,ko00002,ko01000				Bacteria	1TSNU@1239,3F3JH@33958,4H9TY@91061,COG1085@1,COG1085@2	NA|NA|NA	C	Domain of unknown function (DUF4931)
PAKBJLMI_00250	272621.LBA0587	1.7e-165	588.6	Lactobacillaceae	rbsK		2.7.1.15	ko:K00852	ko00030,map00030		R01051,R02750	RC00002,RC00017	ko00000,ko00001,ko01000				Bacteria	1TQRC@1239,3F3S5@33958,4HA87@91061,COG0524@1,COG0524@2	NA|NA|NA	H	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PAKBJLMI_00251	272621.LBA0588	5.9e-126	456.8	Lactobacillaceae	rpiA	GO:0003674,GO:0003824,GO:0004751,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006014,GO:0006081,GO:0006098,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009052,GO:0009117,GO:0009987,GO:0016853,GO:0016860,GO:0016861,GO:0019321,GO:0019362,GO:0019637,GO:0019682,GO:0019693,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046496,GO:0051156,GO:0051186,GO:0055086,GO:0071704,GO:0072524,GO:1901135,GO:1901360,GO:1901564	2.7.1.12,2.7.1.15,5.3.1.6	ko:K00851,ko:K00852,ko:K01807	ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230	M00004,M00007,M00165,M00167,M00580	R01051,R01056,R01737,R02750	RC00002,RC00017,RC00434	ko00000,ko00001,ko00002,ko01000				Bacteria	1V1DB@1239,3F43N@33958,4HFQ7@91061,COG0120@1,COG0120@2	NA|NA|NA	G	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
PAKBJLMI_00252	272621.LBA0590	0.0	1288.9	Lactobacillaceae	kup	GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015318,GO:0015672,GO:0016020,GO:0022857,GO:0022890,GO:0030001,GO:0034220,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0098655,GO:0098660,GO:0098662		ko:K03549					ko00000,ko02000	2.A.72			Bacteria	1TRUQ@1239,3F4CU@33958,4HA8Z@91061,COG3158@1,COG3158@2	NA|NA|NA	P	Transport of potassium into the cell
PAKBJLMI_00253	272621.LBA0591	6.3e-176	623.2	Lactobacillaceae	rihB		3.2.2.1	ko:K01239,ko:K01250,ko:K12700	ko00230,ko00760,ko01100,map00230,map00760,map01100		R01245,R01273,R01677,R01770,R02143	RC00033,RC00063,RC00122,RC00318,RC00485	ko00000,ko00001,ko01000				Bacteria	1TSSS@1239,3F4T0@33958,4HB17@91061,COG1957@1,COG1957@2	NA|NA|NA	F	Nucleoside
PAKBJLMI_00254	272621.LBA0592	3.3e-135	487.6	Lactobacillaceae	gntR			ko:K03486,ko:K03492,ko:K03710					ko00000,ko03000				Bacteria	1TTCD@1239,3F4DA@33958,4HEXQ@91061,COG2188@1,COG2188@2	NA|NA|NA	K	UbiC transcription regulator-associated domain protein
PAKBJLMI_00255	525365.HMPREF0548_1375	2.6e-22	110.9	Lactobacillaceae													Bacteria	1U60U@1239,29NJE@1,30A0B@2,3F6SW@33958,4IFPK@91061	NA|NA|NA		
PAKBJLMI_00256	272621.LBA0593	1.2e-112	412.5	Lactobacillaceae													Bacteria	1U60U@1239,29NJE@1,30A0B@2,3F6SW@33958,4IFPK@91061	NA|NA|NA		
PAKBJLMI_00257	272621.LBA0594	2.9e-285	987.3	Lactobacillaceae				ko:K06147					ko00000,ko02000	3.A.1.106,3.A.1.109,3.A.1.21			Bacteria	1TSRV@1239,3F56T@33958,4I2UW@91061,COG1132@1,COG1132@2	NA|NA|NA	V	ABC transporter transmembrane region
PAKBJLMI_00258	272621.LBA0595	1.8e-153	548.5	Lactobacillaceae													Bacteria	1V2JE@1239,3F3Z7@33958,4HWAW@91061,COG0561@1,COG0561@2	NA|NA|NA	S	hydrolase
PAKBJLMI_00259	272621.LBA0596	5.3e-72	276.9	Lactobacillaceae													Bacteria	1VMZX@1239,3F7JV@33958,4HMTC@91061,COG1846@1,COG1846@2	NA|NA|NA	K	helix_turn_helix multiple antibiotic resistance protein
PAKBJLMI_00260	272621.LBA0597	2.7e-115	421.4	Lactobacillaceae	lmrA		3.6.3.44	ko:K06147,ko:K18104	ko01501,ko02010,map01501,map02010	M00700			ko00000,ko00001,ko00002,ko01000,ko01504,ko02000	3.A.1.106,3.A.1.109,3.A.1.117,3.A.1.123,3.A.1.21			Bacteria	1TSY4@1239,3FC4S@33958,4HAJQ@91061,COG1132@1,COG1132@2	NA|NA|NA	V	ABC transporter
PAKBJLMI_00261	272621.LBA0597	7.9e-177	626.3	Lactobacillaceae	lmrA		3.6.3.44	ko:K06147,ko:K18104	ko01501,ko02010,map01501,map02010	M00700			ko00000,ko00001,ko00002,ko01000,ko01504,ko02000	3.A.1.106,3.A.1.109,3.A.1.117,3.A.1.123,3.A.1.21			Bacteria	1TSY4@1239,3FC4S@33958,4HAJQ@91061,COG1132@1,COG1132@2	NA|NA|NA	V	ABC transporter
PAKBJLMI_00262	272621.LBA0598	1.9e-59	235.0	Lactobacillaceae													Bacteria	1U639@1239,29P3Y@1,30A25@2,3F6XR@33958,4IFSM@91061	NA|NA|NA	S	Enterocin A Immunity
PAKBJLMI_00263	272621.LBA0599	1.3e-137	495.7	Lactobacillaceae	glcR			ko:K02444,ko:K22103					ko00000,ko03000				Bacteria	1V1VH@1239,3F3UT@33958,4HG12@91061,COG1349@1,COG1349@2	NA|NA|NA	K	DeoR C terminal sensor domain
PAKBJLMI_00264	272621.LBA0600	0.0	1679.1	Lactobacillaceae	xfp		4.1.2.22,4.1.2.9	ko:K01621	ko00030,ko00710,ko01100,ko01120,map00030,map00710,map01100,map01120		R00761,R01621	RC00032,RC00226	ko00000,ko00001,ko01000				Bacteria	1TR23@1239,3F3TZ@33958,4HC2J@91061,COG3957@1,COG3957@2	NA|NA|NA	G	Phosphoketolase
PAKBJLMI_00265	272621.LBA0601	5.3e-161	573.5	Lactobacillaceae	rssA												Bacteria	1TQ9W@1239,3F52H@33958,4HCHJ@91061,COG4667@1,COG4667@2	NA|NA|NA	S	Phospholipase, patatin family
PAKBJLMI_00266	272621.LBA0602	3.8e-224	783.9	Lactobacillaceae			2.7.13.3	ko:K07706	ko02020,ko02024,map02020,map02024	M00495			ko00000,ko00001,ko00002,ko01000,ko01001,ko02022				Bacteria	1V1ET@1239,3F71I@33958,4HGNA@91061,COG3290@1,COG3290@2	NA|NA|NA	T	GHKL domain
PAKBJLMI_00267	272621.LBA0603	5e-145	520.4	Lactobacillaceae				ko:K07707	ko02020,ko02024,map02020,map02024	M00495			ko00000,ko00001,ko00002,ko02022				Bacteria	1V392@1239,3F6AD@33958,4HHAI@91061,COG3279@1,COG3279@2	NA|NA|NA	K	LytTr DNA-binding domain
PAKBJLMI_00268	272621.LBA0604	3.4e-222	777.3	Lactobacillaceae				ko:K07052					ko00000				Bacteria	1VNA9@1239,3F5T9@33958,4HRMP@91061,COG1266@1,COG1266@2	NA|NA|NA	S	CAAX protease self-immunity
PAKBJLMI_00269	272621.LBA0605	2.3e-153	548.1	Lactobacillaceae													Bacteria	1TR16@1239,3F55S@33958,4HCZ6@91061,COG0561@1,COG0561@2	NA|NA|NA	S	hydrolase
PAKBJLMI_00270	272621.LBA0606	0.0	1245.7	Lactobacillaceae	glvC		2.7.1.199,2.7.1.208,2.7.1.211	ko:K02749,ko:K02750,ko:K02755,ko:K02756,ko:K02757,ko:K02790,ko:K02791,ko:K02808,ko:K02809,ko:K02810	ko00010,ko00500,ko00520,ko02060,map00010,map00500,map00520,map02060	M00266,M00268,M00269,M00271	R00811,R02738,R04111	RC00017,RC03206	ko00000,ko00001,ko00002,ko01000,ko02000	4.A.1.1.10,4.A.1.1.16,4.A.1.1.3,4.A.1.1.4,4.A.1.1.8,4.A.1.2.1,4.A.1.2.10,4.A.1.2.11,4.A.1.2.12,4.A.1.2.2,4.A.1.2.5,4.A.1.2.6,4.A.1.2.9			Bacteria	1TPJ8@1239,3F44V@33958,4HA8X@91061,COG1263@1,COG1263@2,COG1264@1,COG1264@2	NA|NA|NA	G	phosphotransferase system, EIIB
PAKBJLMI_00271	272621.LBA0607	1.9e-147	528.5	Lactobacillaceae	glvR			ko:K03481					ko00000,ko03000				Bacteria	1V2J8@1239,3FBJH@33958,4IQVX@91061,COG1737@1,COG1737@2	NA|NA|NA	K	Helix-turn-helix domain, rpiR family
PAKBJLMI_00272	272621.LBA0608	2.9e-82	311.2	Lactobacillaceae													Bacteria	1U5P7@1239,2CJCY@1,309TS@2,3F69B@33958,4IFDR@91061	NA|NA|NA		
PAKBJLMI_00273	272621.LBA0609	1.1e-86	325.9	Lactobacillaceae	pts23A			ko:K02777	ko00010,ko00500,ko00520,ko02026,ko02060,ko05111,map00010,map00500,map00520,map02026,map02060,map05111	M00265,M00266,M00268,M00270,M00272,M00303,M00806	R02738,R02780,R04111,R04394,R05132,R08559	RC00017,RC03206	ko00000,ko00001,ko00002,ko01000,ko02000	4.A.1.1.1			Bacteria	1VAEB@1239,3FC0X@33958,4HIPR@91061,COG2190@1,COG2190@2	NA|NA|NA	G	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
PAKBJLMI_00274	272621.LBA0610	1.9e-40	171.4	Lactobacillaceae													Bacteria	1U6H9@1239,29PEW@1,30AD2@2,3F7X8@33958,4IG9K@91061	NA|NA|NA		
PAKBJLMI_00275	272621.LBA0611	1.7e-119	435.3	Lactobacillaceae													Bacteria	1V6AG@1239,3F6YM@33958,4HN5N@91061,COG0778@1,COG0778@2	NA|NA|NA	C	nitroreductase
PAKBJLMI_00276	272621.LBA0612	1.1e-248	865.5	Lactobacillaceae	yhdP			ko:K03699,ko:K06189					ko00000,ko02000,ko02042	9.A.40.1.2			Bacteria	1TPN0@1239,3F3TX@33958,4H9SB@91061,COG1253@1,COG1253@2	NA|NA|NA	S	Transporter associated domain
PAKBJLMI_00277	272621.LBA0613	2.2e-102	378.3	Lactobacillaceae	hpt	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464	2.4.2.8	ko:K00760	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110		R00190,R01132,R01229,R02142,R08237,R08238,R08245	RC00063,RC00122	ko00000,ko00001,ko01000				Bacteria	1V1C9@1239,3F56C@33958,4HFZ2@91061,COG0634@1,COG0634@2	NA|NA|NA	F	Belongs to the purine pyrimidine phosphoribosyltransferase family
PAKBJLMI_00278	272621.LBA0615	1.5e-228	798.5	Lactobacillaceae	potE			ko:K03294					ko00000	2.A.3.2			Bacteria	1TQ48@1239,3F3YJ@33958,4HBGT@91061,COG0531@1,COG0531@2	NA|NA|NA	E	amino acid
PAKBJLMI_00279	272621.LBA0616	1.1e-130	472.6	Lactobacillaceae				ko:K07273					ko00000				Bacteria	1V484@1239,3F4K0@33958,4HQWA@91061,COG3757@1,COG3757@2	NA|NA|NA	M	Glycosyl hydrolases family 25
PAKBJLMI_00280	272621.LBA0617	2.6e-209	734.6	Lactobacillaceae	yfmL	GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006807,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009987,GO:0010501,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070035,GO:0071704,GO:0090304,GO:0140098,GO:1901360	3.6.4.13	ko:K05592,ko:K18692	ko03018,map03018				ko00000,ko00001,ko01000,ko03009,ko03019				Bacteria	1TQ9R@1239,3F4K8@33958,4HANR@91061,COG0513@1,COG0513@2	NA|NA|NA	L	DEAD DEAH box helicase
PAKBJLMI_00281	272621.LBA0618	5.9e-244	849.7	Lactobacillaceae	celB	GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008150,GO:0016020,GO:0044464,GO:0051179,GO:0051234,GO:0071702,GO:0071944,GO:1901264,GO:1902815		ko:K02761	ko00500,ko02060,map00500,map02060	M00275	R11170,R11172	RC00017,RC03206	ko00000,ko00001,ko00002,ko02000	4.A.3.2		iECABU_c1320.ECABU_c19930	Bacteria	1TP8D@1239,3F4VG@33958,4H9W2@91061,COG1455@1,COG1455@2	NA|NA|NA	G	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PAKBJLMI_00284	272621.LBA0620	4.1e-217	760.4	Lactobacillaceae	mnaA		5.1.3.14	ko:K01791	ko00520,ko01100,ko05111,map00520,map01100,map05111	M00362	R00420	RC00290	ko00000,ko00001,ko00002,ko01000,ko01005				Bacteria	1TQZT@1239,3F3KQ@33958,4HBI3@91061,COG0381@1,COG0381@2	NA|NA|NA	G	Belongs to the UDP-N-acetylglucosamine 2-epimerase family
PAKBJLMI_00285	272621.LBA0621	4.3e-89	334.0	Lactobacillaceae	gtcA	GO:0000166,GO:0003674,GO:0003824,GO:0003870,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0008883,GO:0009058,GO:0009987,GO:0016020,GO:0016410,GO:0016491,GO:0016620,GO:0016740,GO:0016746,GO:0016747,GO:0016748,GO:0016749,GO:0016903,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0036094,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044464,GO:0046148,GO:0046483,GO:0048037,GO:0050661,GO:0050662,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:0071944,GO:0097159,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576											Bacteria	1VESW@1239,3F4GH@33958,4HNK7@91061,COG2246@1,COG2246@2	NA|NA|NA	S	Teichoic acid glycosylation protein
PAKBJLMI_00286	272621.LBA0622	1.2e-79	302.4	Lactobacillaceae	fld			ko:K03839					ko00000				Bacteria	1V7AG@1239,3F6HY@33958,4HMJF@91061,COG0716@1,COG0716@2	NA|NA|NA	C	Flavodoxin
PAKBJLMI_00287	272621.LBA0623	1.1e-163	582.4	Lactobacillaceae	map	GO:0000096,GO:0003674,GO:0003824,GO:0004177,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006464,GO:0006508,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008198,GO:0008233,GO:0008235,GO:0008237,GO:0008238,GO:0009066,GO:0009987,GO:0010467,GO:0016151,GO:0016485,GO:0016787,GO:0019538,GO:0019752,GO:0030145,GO:0035551,GO:0036211,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0050897,GO:0051604,GO:0070006,GO:0070011,GO:0070084,GO:0071704,GO:0140096,GO:1901564,GO:1901605	3.4.11.18	ko:K01265					ko00000,ko01000,ko01002				Bacteria	1TQC1@1239,3F3MK@33958,4H9S9@91061,COG0024@1,COG0024@2	NA|NA|NA	E	Methionine Aminopeptidase
PAKBJLMI_00288	272621.LBA0624	4.1e-151	540.8	Lactobacillaceae	yihY			ko:K07058					ko00000				Bacteria	1U7HM@1239,3F4TC@33958,4H9MJ@91061,COG1295@1,COG1295@2	NA|NA|NA	S	Belongs to the UPF0761 family
PAKBJLMI_00289	272621.LBA0625	3.3e-169	600.9	Lactobacillaceae	galU		2.7.7.9	ko:K00963	ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130	M00129,M00361,M00362,M00549	R00289	RC00002	ko00000,ko00001,ko00002,ko01000				Bacteria	1TQ24@1239,3F45A@33958,4HATY@91061,COG1210@1,COG1210@2	NA|NA|NA	M	UTP-glucose-1-phosphate uridylyltransferase
PAKBJLMI_00290	272621.LBA0626	5.1e-215	753.4	Lactobacillaceae	atoB		1.1.1.88,2.3.1.9	ko:K00054,ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020	M00088,M00095,M00373,M00374,M00375	R00238,R01177,R02081	RC00004,RC00326,RC00644	ko00000,ko00001,ko00002,ko01000,ko04147				Bacteria	1TP07@1239,3F3Q5@33958,4H9RJ@91061,COG0183@1,COG0183@2	NA|NA|NA	I	Belongs to the thiolase family
PAKBJLMI_00291	272621.LBA0627	1.3e-218	765.4	Lactobacillaceae	mvaA		1.1.1.34,1.1.1.88,2.3.1.9	ko:K00021,ko:K00054,ko:K00626	ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,ko04152,ko04976,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020,map04152,map04976	M00088,M00095,M00373,M00374,M00375	R00238,R01177,R02081,R02082	RC00004,RC00326,RC00644	ko00000,ko00001,ko00002,ko01000,ko04147				Bacteria	1TPNY@1239,3F3YY@33958,4HBQ3@91061,COG1257@1,COG1257@2	NA|NA|NA	C	Belongs to the HMG-CoA reductase family
PAKBJLMI_00292	272621.LBA0628	7.1e-217	759.6	Lactobacillaceae	mvaS		2.3.3.10	ko:K01641	ko00072,ko00280,ko00650,ko00900,ko01100,ko01110,ko01130,map00072,map00280,map00650,map00900,map01100,map01110,map01130	M00088,M00095	R01978	RC00004,RC00503	ko00000,ko00001,ko00002,ko01000				Bacteria	1TR4K@1239,3F425@33958,4HA67@91061,COG3425@1,COG3425@2	NA|NA|NA	I	Hydroxymethylglutaryl-CoA synthase
PAKBJLMI_00293	272621.LBA0629	1.9e-46	191.4	Lactobacillaceae													Bacteria	1U6EZ@1239,29PCT@1,30AB1@2,3F7RU@33958,4IG6T@91061	NA|NA|NA		
PAKBJLMI_00294	272621.LBA0630	1.5e-177	628.6	Lactobacillaceae				ko:K06889					ko00000				Bacteria	1TQYU@1239,3F43H@33958,4HC4H@91061,COG1073@1,COG1073@2	NA|NA|NA	D	Alpha beta
PAKBJLMI_00295	272621.LBA0632	6e-263	912.9	Lactobacillaceae	rumA		2.1.1.190,2.1.1.35	ko:K00557,ko:K03215					ko00000,ko01000,ko03009,ko03016				Bacteria	1TP4H@1239,3F4GQ@33958,4HA6M@91061,COG2265@1,COG2265@2	NA|NA|NA	J	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PAKBJLMI_00296	272621.LBA0633	1.7e-145	521.9	Lactobacillaceae	recX	GO:0003674,GO:0005488,GO:0005515,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0019899,GO:0031668,GO:0033554,GO:0043086,GO:0044092,GO:0050790,GO:0050896,GO:0051716,GO:0065007,GO:0065009,GO:0071496	2.4.1.337	ko:K03565,ko:K19002	ko00561,ko01100,map00561,map01100		R10850	RC00005,RC00059	ko00000,ko00001,ko01000,ko01003,ko03400		GT4		Bacteria	1V72V@1239,3F4BY@33958,4HJ7R@91061,COG2137@1,COG2137@2	NA|NA|NA	S	Regulatory protein RecX
PAKBJLMI_00298	272621.LBA0634	2e-67	261.5	Lactobacillaceae													Bacteria	1U5P0@1239,29NVN@1,309TR@2,3F693@33958,4IFDJ@91061	NA|NA|NA		
PAKBJLMI_00299	326425.lhe_0650	1.2e-71	275.8	Lactobacillaceae													Bacteria	1U5U1@1239,2C070@1,300GJ@2,3F6I5@33958,4IFHZ@91061	NA|NA|NA		
PAKBJLMI_00300	272621.LBA0635	5.2e-50	203.4	Lactobacillaceae	hlyX			ko:K03699					ko00000,ko02042				Bacteria	1TPN0@1239,3F3KG@33958,4H9SB@91061,COG1253@1,COG1253@2	NA|NA|NA	S	Transporter associated domain
PAKBJLMI_00301	272621.LBA0635	2.4e-99	368.2	Lactobacillaceae	hlyX			ko:K03699					ko00000,ko02042				Bacteria	1TPN0@1239,3F3KG@33958,4H9SB@91061,COG1253@1,COG1253@2	NA|NA|NA	S	Transporter associated domain
PAKBJLMI_00302	272621.LBA0636	7.7e-285	985.7	Lactobacillaceae	prfC	GO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0016150,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576		ko:K02837,ko:K07133					ko00000,ko03012				Bacteria	1TPYT@1239,3F489@33958,4HADS@91061,COG4108@1,COG4108@2	NA|NA|NA	J	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
PAKBJLMI_00303	272621.LBA0637	6.7e-44	183.0	Lactobacillaceae	XK27_09445												Bacteria	1VFRS@1239,2EBZ8@1,335YI@2,3F70G@33958,4HNUK@91061	NA|NA|NA	S	Domain of unknown function (DUF1827)
PAKBJLMI_00304	272621.LBA0638	0.0	1290.8	Lactobacillaceae	clpE	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944		ko:K03697					ko00000,ko03110				Bacteria	1TPMU@1239,3F3K9@33958,4HA0V@91061,COG0542@1,COG0542@2	NA|NA|NA	O	Belongs to the ClpA ClpB family
PAKBJLMI_00305	1033837.WANG_1007	8.5e-41	172.6	Lactobacillaceae	ptsH	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0043610,GO:0044424,GO:0044464,GO:0050789,GO:0065007		ko:K11189					ko00000,ko02000	4.A.2.1			Bacteria	1VA0R@1239,3F6XQ@33958,4HKGA@91061,COG1925@1,COG1925@2	NA|NA|NA	G	phosphocarrier protein HPR
PAKBJLMI_00306	272621.LBA0640	0.0	1090.1	Lactobacillaceae	ptsI	GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006810,GO:0008150,GO:0008643,GO:0008965,GO:0009401,GO:0016740,GO:0016772,GO:0016775,GO:0019197,GO:0032991,GO:0042802,GO:0043167,GO:0043169,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0051179,GO:0051234,GO:0071702	2.7.3.9	ko:K08483	ko02060,map02060				ko00000,ko00001,ko01000,ko02000	8.A.7		iB21_1397.B21_02277,iE2348C_1286.E2348C_2602,iEC042_1314.EC042_2625,iECBD_1354.ECBD_1265,iECB_1328.ECB_02316,iECD_1391.ECD_02316,iECH74115_1262.ECH74115_3647,iECIAI1_1343.ECIAI1_2474,iECIAI39_1322.ECIAI39_2562,iECO103_1326.ECO103_2935,iECO111_1330.ECO111_3146,iECO26_1355.ECO26_3469,iECP_1309.ECP_2440,iECSE_1348.ECSE_2707,iECSP_1301.ECSP_3364,iECUMN_1333.ECUMN_2738,iECW_1372.ECW_m2645,iECs_1301.ECs3288,iEKO11_1354.EKO11_1312,iEcE24377_1341.EcE24377A_2703,iEcHS_1320.EcHS_A2551,iEcSMS35_1347.EcSMS35_2571,iEcolC_1368.EcolC_1262,iLF82_1304.LF82_1770,iNRG857_1313.NRG857_12115,iSBO_1134.SBO_2440,iSDY_1059.SDY_2613,iSFV_1184.SFV_2468,iSF_1195.SF2471,iSFxv_1172.SFxv_2720,iSSON_1240.SSON_2505,iS_1188.S2617,iUMNK88_1353.UMNK88_3018,iWFL_1372.ECW_m2645,iZ_1308.Z3682	Bacteria	1TPK8@1239,3F3MS@33958,4H9VD@91061,COG1080@1,COG1080@2	NA|NA|NA	G	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
PAKBJLMI_00307	272621.LBA0641	1e-66	259.2	Lactobacillaceae	spxA		1.20.4.1	ko:K00537,ko:K16509					ko00000,ko01000				Bacteria	1V3QC@1239,3F6HJ@33958,4HH0I@91061,COG1393@1,COG1393@2	NA|NA|NA	K	Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
PAKBJLMI_00308	272621.LBA0642	8.8e-128	463.0	Lactobacillaceae	mecA	GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141		ko:K16511					ko00000				Bacteria	1UZ7D@1239,3F5G4@33958,4HID6@91061,COG4862@1,COG4862@2	NA|NA|NA	NOT	Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
PAKBJLMI_00309	272621.LBA0643	1.2e-160	572.4	Lactobacillaceae	coiA		3.6.4.12	ko:K03657,ko:K06198	ko03420,ko03430,map03420,map03430				ko00000,ko00001,ko01000,ko03400				Bacteria	1TRGD@1239,3F4BZ@33958,4HFP5@91061,COG4469@1,COG4469@2	NA|NA|NA	S	Competence protein
PAKBJLMI_00310	272621.LBA0644	1.2e-114	419.1	Lactobacillaceae	yjbH	GO:0005575,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944											Bacteria	1TQ8K@1239,3F6QR@33958,4HAI8@91061,COG2761@1,COG2761@2	NA|NA|NA	Q	Thioredoxin
PAKBJLMI_00311	272621.LBA0645	9.5e-112	409.5	Lactobacillaceae	yjbK												Bacteria	1TTVM@1239,3F4YS@33958,4I4A3@91061,COG4116@1,COG4116@2	NA|NA|NA	S	CYTH
PAKBJLMI_00312	272621.LBA0646	2.3e-113	414.8	Lactobacillaceae	yjbM		2.7.6.5	ko:K07816	ko00230,map00230		R00429	RC00002,RC00078	ko00000,ko00001,ko01000				Bacteria	1TQ2F@1239,3F452@33958,4HA3Q@91061,COG2357@1,COG2357@2	NA|NA|NA	S	RelA SpoT domain protein
PAKBJLMI_00313	272621.LBA0647	1.6e-151	542.0	Lactobacillaceae	nadK	GO:0000166,GO:0003674,GO:0003824,GO:0003951,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006741,GO:0006753,GO:0006766,GO:0006767,GO:0006769,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008976,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009820,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016776,GO:0017076,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046496,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0051287,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:0097367,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576	2.7.1.23	ko:K00858	ko00760,ko01100,map00760,map01100		R00104	RC00002,RC00078	ko00000,ko00001,ko01000			iEcSMS35_1347.EcSMS35_2767,iHN637.CLJU_RS05480,iLJ478.TM1733,iSB619.SA_RS04895	Bacteria	1TRB3@1239,3F45D@33958,4HB08@91061,COG0061@1,COG0061@2	NA|NA|NA	F	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
PAKBJLMI_00314	272621.LBA0648	8.3e-173	612.8	Lactobacillaceae	rluD		5.4.99.23	ko:K06180					ko00000,ko01000,ko03009				Bacteria	1TS1T@1239,3F46Z@33958,4HBRY@91061,COG0564@1,COG0564@2	NA|NA|NA	J	Responsible for synthesis of pseudouridine from uracil
PAKBJLMI_00315	272621.LBA0649	0.0	1223.4	Lactobacillaceae	mycA	GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005504,GO:0005515,GO:0006082,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0008289,GO:0009987,GO:0016829,GO:0016835,GO:0016836,GO:0019752,GO:0031406,GO:0032787,GO:0033293,GO:0036094,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0046983,GO:0048037,GO:0050151,GO:0050660,GO:0050662,GO:0071704,GO:0071949,GO:0097159,GO:1901265,GO:1901363	4.2.1.53	ko:K10254					ko00000,ko01000				Bacteria	1TQZ6@1239,3F3QX@33958,4HAYH@91061,COG4716@1,COG4716@2	NA|NA|NA	S	Myosin-crossreactive antigen
PAKBJLMI_00316	272621.LBA0650	2e-118	431.8	Lactobacillaceae													Bacteria	1V6V7@1239,3F417@33958,4HITM@91061,COG0398@1,COG0398@2	NA|NA|NA	S	SNARE associated Golgi protein
PAKBJLMI_00317	272621.LBA0651	1.7e-201	708.4	Lactobacillaceae	pgl	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016787,GO:0016788,GO:0017057,GO:0044424,GO:0044444,GO:0044464,GO:0052689	3.1.1.31	ko:K07404	ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200	M00004,M00006,M00008	R02035	RC00537	ko00000,ko00001,ko00002,ko01000				Bacteria	1TQ3J@1239,3F3RC@33958,4HBHB@91061,COG2706@1,COG2706@2	NA|NA|NA	G	Lactonase, 7-bladed beta-propeller
PAKBJLMI_00318	272621.LBA0654	0.0	1769.6	Lactobacillaceae	pacL		3.6.3.8,3.6.3.9	ko:K01537,ko:K01539	ko04022,ko04024,ko04260,ko04261,ko04911,ko04918,ko04919,ko04925,ko04960,ko04961,ko04964,ko04970,ko04971,ko04972,ko04973,ko04974,ko04976,ko04978,map04022,map04024,map04260,map04261,map04911,map04918,map04919,map04925,map04960,map04961,map04964,map04970,map04971,map04972,map04973,map04974,map04976,map04978				ko00000,ko00001,ko01000,ko04147	3.A.3.1,3.A.3.2			Bacteria	1TPF5@1239,3FC0Z@33958,4HTQ4@91061,COG0474@1,COG0474@2	NA|NA|NA	P	Cation transporter/ATPase, N-terminus
PAKBJLMI_00319	272621.LBA0655	2.2e-66	258.1	Lactobacillaceae	srlB		2.7.1.198	ko:K02781	ko00051,ko02060,map00051,map02060	M00280	R05820	RC00017,RC03206	ko00000,ko00001,ko00002,ko01000,ko02000	4.A.4.1			Bacteria	1VGKB@1239,3F8EZ@33958,4HNJN@91061,COG3731@1,COG3731@2	NA|NA|NA	G	PTS system glucitol/sorbitol-specific IIA component
PAKBJLMI_00320	272621.LBA0656	3.2e-212	744.2	Lactobacillaceae	yubA												Bacteria	1TQ84@1239,3F418@33958,4H9SR@91061,COG0628@1,COG0628@2	NA|NA|NA	S	AI-2E family transporter
PAKBJLMI_00321	272621.LBA0657	1.3e-104	385.6	Lactobacillaceae	trmL	GO:0001510,GO:0002128,GO:0002130,GO:0002131,GO:0002132,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016300,GO:0016427,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042802,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0052665,GO:0052666,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360	2.1.1.207	ko:K03216					ko00000,ko01000,ko03016				Bacteria	1V3GW@1239,3F42Y@33958,4HFNY@91061,COG0219@1,COG0219@2	NA|NA|NA	J	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
PAKBJLMI_00322	272621.LBA0658	1.8e-68	265.0	Lactobacillaceae	WQ51_03320												Bacteria	1VJ7H@1239,3F6JB@33958,4HP0P@91061,COG4835@1,COG4835@2	NA|NA|NA	S	Protein of unknown function (DUF1149)
PAKBJLMI_00323	272621.LBA0659	0.0	1425.2	Lactobacillaceae	ftsK	GO:0000003,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0019954,GO:0030436,GO:0031323,GO:0031326,GO:0032502,GO:0043934,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:1903506,GO:2000112,GO:2001141		ko:K03466					ko00000,ko03036	3.A.12			Bacteria	1TPJR@1239,3F3JZ@33958,4H9WA@91061,COG1674@1,COG1674@2	NA|NA|NA	D	Belongs to the FtsK SpoIIIE SftA family
PAKBJLMI_00324	272621.LBA0660	3.5e-227	793.9	Lactobacillaceae			2.7.1.26,2.7.7.2	ko:K07263,ko:K11753	ko00740,ko01100,ko01110,map00740,map01100,map01110	M00125	R00161,R00549	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000,ko01002				Bacteria	1TPN6@1239,3F3SA@33958,4H9P5@91061,COG0612@1,COG0612@2	NA|NA|NA	S	Peptidase M16 inactive domain protein
PAKBJLMI_00325	272621.LBA0661	4.5e-241	840.1	Lactobacillaceae													Bacteria	1TP5I@1239,3F4MU@33958,4H9YG@91061,COG0612@1,COG0612@2	NA|NA|NA	S	Peptidase M16
PAKBJLMI_00326	272621.LBA0662	2e-132	478.4	Lactobacillaceae													Bacteria	1V0YW@1239,3FBEA@33958,4ISGK@91061,COG1028@1,COG1028@2	NA|NA|NA	IQ	Enoyl-(Acyl carrier protein) reductase
PAKBJLMI_00327	272621.LBA0663	6.6e-119	434.1	Lactobacillaceae	ymfM			ko:K15539					ko00000				Bacteria	1V1N7@1239,3F3SM@33958,4HKW3@91061,COG1426@1,COG1426@2	NA|NA|NA	S	Helix-turn-helix domain
PAKBJLMI_00328	272621.LBA0664	9.3e-98	362.8	Lactobacillaceae	pgsA	GO:0006629,GO:0006644,GO:0006650,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0045017,GO:0046474,GO:0046486,GO:0071704,GO:0090407,GO:1901576	2.7.8.41,2.7.8.5	ko:K00995,ko:K08744	ko00564,ko01100,map00564,map01100		R01801,R02030	RC00002,RC00017,RC02795	ko00000,ko00001,ko01000			iSB619.SA_RS06365	Bacteria	1V6PJ@1239,3F4BI@33958,4HCEX@91061,COG0558@1,COG0558@2	NA|NA|NA	I	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PAKBJLMI_00329	272621.LBA0666	7.9e-194	682.9	Lactobacillaceae	recA	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0008152,GO:0009292,GO:0009294,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0030420,GO:0031668,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0044764,GO:0046483,GO:0050896,GO:0051704,GO:0051716,GO:0071496,GO:0071704,GO:0090304,GO:1901360		ko:K03553	ko03440,map03440	M00729			ko00000,ko00001,ko00002,ko03400				Bacteria	1TPD5@1239,3F3KU@33958,4HAG5@91061,COG0468@1,COG0468@2	NA|NA|NA	L	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
PAKBJLMI_00330	272621.LBA0667	8.7e-221	773.1	Lactobacillaceae	rny	GO:0003674,GO:0005488,GO:0005515,GO:0042802		ko:K18682	ko03018,map03018				ko00000,ko00001,ko01000,ko03019				Bacteria	1TP48@1239,3F3WX@33958,4HC9J@91061,COG1418@1,COG1418@2	NA|NA|NA	S	Endoribonuclease that initiates mRNA decay
PAKBJLMI_00331	272621.LBA0668	1.8e-212	745.0	Lactobacillaceae	tagO	GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0016043,GO:0016740,GO:0016772,GO:0016780,GO:0030145,GO:0034645,GO:0042546,GO:0043167,GO:0043169,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0044464,GO:0045229,GO:0046872,GO:0046914,GO:0070589,GO:0071554,GO:0071555,GO:0071704,GO:0071840,GO:0071944,GO:1901576	2.7.8.33,2.7.8.35	ko:K02851			R08856	RC00002	ko00000,ko01000,ko01003,ko01005				Bacteria	1TP9V@1239,3F4JV@33958,4H9KT@91061,COG0472@1,COG0472@2	NA|NA|NA	M	transferase
PAKBJLMI_00332	272621.LBA0669	9.6e-118	429.5	Lactobacillaceae	yvyE		3.4.13.9	ko:K01271					ko00000,ko01000,ko01002				Bacteria	1V6MQ@1239,3F3SQ@33958,4HBIT@91061,COG1739@1,COG1739@2	NA|NA|NA	S	YigZ family
PAKBJLMI_00333	272621.LBA0670	3.3e-247	860.5	Lactobacillaceae	comFA	GO:0003674,GO:0003678,GO:0003824,GO:0004003,GO:0004386,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006268,GO:0006270,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032392,GO:0032508,GO:0033554,GO:0034641,GO:0034645,GO:0042623,GO:0043138,GO:0043140,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0046483,GO:0050896,GO:0051276,GO:0051716,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360,GO:1901576		ko:K02240		M00429			ko00000,ko00002,ko02044	3.A.11.1			Bacteria	1TPZE@1239,3F3TQ@33958,4HB00@91061,COG4098@1,COG4098@2	NA|NA|NA	L	Helicase C-terminal domain protein
PAKBJLMI_00334	272621.LBA0671	3.1e-135	487.6	Lactobacillaceae	comFC			ko:K02242		M00429			ko00000,ko00002,ko02044				Bacteria	1V73S@1239,3F714@33958,4HJ6R@91061,COG1040@1,COG1040@2	NA|NA|NA	S	Competence protein
PAKBJLMI_00335	272621.LBA0672	5.5e-95	353.6	Lactobacillaceae	hpf	GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006417,GO:0006448,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015935,GO:0017148,GO:0019222,GO:0022626,GO:0022627,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0043021,GO:0043022,GO:0043024,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044877,GO:0045900,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0080090,GO:1990904,GO:2000112,GO:2000113		ko:K05808					ko00000,ko03009				Bacteria	1V1D5@1239,3F40M@33958,4HFX9@91061,COG1544@1,COG1544@2	NA|NA|NA	J	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
PAKBJLMI_00336	272621.LBA0673	0.0	1538.5	Lactobacillaceae	secA	GO:0000166,GO:0002790,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0009306,GO:0009987,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032940,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680		ko:K03070	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335			ko00000,ko00001,ko00002,ko02044	3.A.5.1,3.A.5.10,3.A.5.2,3.A.5.4			Bacteria	1TPEY@1239,3F4DH@33958,4HA22@91061,COG0653@1,COG0653@2	NA|NA|NA	U	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
PAKBJLMI_00337	272621.LBA0674	3.5e-188	664.1	Lactobacillaceae	prfB	GO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0016149,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576		ko:K02836					ko00000,ko03012				Bacteria	1TPSB@1239,3F3SN@33958,4H9N2@91061,COG1186@1,COG1186@2	NA|NA|NA	J	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
PAKBJLMI_00339	272621.LBA0676	5.4e-178	630.2	Lactobacillaceae	hprK	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464		ko:K06023					ko00000,ko01000				Bacteria	1TP5Z@1239,3F3Z3@33958,4HAXR@91061,COG1493@1,COG1493@2	NA|NA|NA	F	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
PAKBJLMI_00340	272621.LBA0677	1.4e-158	565.5	Lactobacillaceae	lgt	GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0008961,GO:0009058,GO:0009059,GO:0009898,GO:0009987,GO:0016020,GO:0016021,GO:0016740,GO:0016757,GO:0019538,GO:0031224,GO:0031226,GO:0034645,GO:0036211,GO:0040007,GO:0042157,GO:0042158,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0071704,GO:0071944,GO:0098552,GO:0098562,GO:0140096,GO:1901564,GO:1901566,GO:1901576	2.1.1.199	ko:K03438,ko:K13292					ko00000,ko01000,ko03009				Bacteria	1TPAK@1239,3F42N@33958,4HAT0@91061,COG0682@1,COG0682@2	NA|NA|NA	M	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
PAKBJLMI_00341	272621.LBA0678	6.1e-188	663.3	Lactobacillaceae	gpsA	GO:0003674,GO:0003824,GO:0004367,GO:0006072,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016491,GO:0016614,GO:0016616,GO:0019637,GO:0044237,GO:0046167,GO:0047952,GO:0052646,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901576	1.1.1.94	ko:K00057	ko00564,ko01110,map00564,map01110		R00842,R00844	RC00029	ko00000,ko00001,ko01000				Bacteria	1TQ5P@1239,3F4C8@33958,4HAXW@91061,COG0240@1,COG0240@2	NA|NA|NA	I	Glycerol-3-phosphate dehydrogenase
PAKBJLMI_00342	272621.LBA0679	1.2e-177	629.0	Lactobacillaceae	trxB		1.8.1.9	ko:K00384	ko00450,map00450		R02016,R03596,R09372	RC00013,RC02518,RC02873	ko00000,ko00001,ko01000				Bacteria	1TNZS@1239,3F411@33958,4HA4N@91061,COG0492@1,COG0492@2	NA|NA|NA	C	Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
PAKBJLMI_00343	272621.LBA0680	0.0	1185.6	Lactobacillaceae	glgB	GO:0000271,GO:0003674,GO:0003824,GO:0003844,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005975,GO:0005976,GO:0005977,GO:0005978,GO:0006073,GO:0006091,GO:0006112,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009250,GO:0009987,GO:0015980,GO:0016020,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0033554,GO:0033692,GO:0034637,GO:0034645,GO:0040007,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716,GO:0055114,GO:0071704,GO:0071944,GO:1901576	2.4.1.18,3.2.1.141,3.2.1.20	ko:K00700,ko:K01187,ko:K01236,ko:K17734	ko00052,ko00500,ko01100,ko01110,map00052,map00500,map01100,map01110	M00565	R00028,R00801,R00802,R02110,R06087,R06088,R09995,R11256	RC00028,RC00049,RC00077	ko00000,ko00001,ko00002,ko01000,ko01002,ko04147		CBM48,GH13,GH31	iAPECO1_1312.APECO1_3025,iECNA114_1301.ECNA114_3542,iECOK1_1307.ECOK1_3857,iECS88_1305.ECS88_3830,iECSF_1327.ECSF_3253,iJN678.glgB,iLF82_1304.LF82_0837,iNRG857_1313.NRG857_17030,iUTI89_1310.UTI89_C3941	Bacteria	1TP4M@1239,3F4KT@33958,4HAPM@91061,COG0296@1,COG0296@2	NA|NA|NA	G	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
PAKBJLMI_00344	272621.LBA0681	2.9e-223	780.8	Lactobacillaceae	glgC		2.7.7.27	ko:K00975	ko00500,ko00520,ko01100,ko01110,ko02026,map00500,map00520,map01100,map01110,map02026	M00565	R00948	RC00002	ko00000,ko00001,ko00002,ko01000				Bacteria	1TNZW@1239,3F4IA@33958,4HAZX@91061,COG0448@1,COG0448@2	NA|NA|NA	H	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
PAKBJLMI_00345	272621.LBA0682	7.2e-214	749.6	Lactobacillaceae	glgD		2.4.1.21,2.7.7.27	ko:K00703,ko:K00975	ko00500,ko00520,ko01100,ko01110,ko02026,map00500,map00520,map01100,map01110,map02026	M00565	R00948,R02421	RC00002,RC00005	ko00000,ko00001,ko00002,ko01000,ko01003		GT5		Bacteria	1TPZ3@1239,3F58E@33958,4H9UQ@91061,COG0448@1,COG0448@2	NA|NA|NA	G	Nucleotidyl transferase
PAKBJLMI_00346	272621.LBA0683	2.8e-287	993.8	Lactobacillaceae	glgA	GO:0003674,GO:0003824,GO:0016740,GO:0016757	2.4.1.21	ko:K00703	ko00500,ko01100,ko01110,ko02026,map00500,map01100,map01110,map02026	M00565	R02421	RC00005	ko00000,ko00001,ko00002,ko01000,ko01003		GT5		Bacteria	1TQ4M@1239,3F3PP@33958,4HAVA@91061,COG0297@1,COG0297@2	NA|NA|NA	F	Synthesizes alpha-1,4-glucan chains using ADP-glucose
PAKBJLMI_00347	272621.LBA0685	0.0	1605.1	Lactobacillaceae	glgP	GO:0000272,GO:0003674,GO:0003824,GO:0004645,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0005976,GO:0005977,GO:0005980,GO:0006073,GO:0006091,GO:0006112,GO:0008144,GO:0008150,GO:0008152,GO:0008184,GO:0009056,GO:0009057,GO:0009251,GO:0009987,GO:0015980,GO:0016052,GO:0016740,GO:0016757,GO:0016758,GO:0019842,GO:0030170,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044247,GO:0044248,GO:0044260,GO:0044262,GO:0044264,GO:0044275,GO:0044424,GO:0044464,GO:0048037,GO:0050662,GO:0055114,GO:0070279,GO:0071704,GO:0097159,GO:1901363,GO:1901575	2.4.1.1	ko:K00688	ko00500,ko01100,ko01110,ko02026,ko04217,ko04910,ko04922,ko04931,map00500,map01100,map01110,map02026,map04217,map04910,map04922,map04931		R02111		ko00000,ko00001,ko01000		GT35	iYO844.BSU30940	Bacteria	1TQAJ@1239,3F4Z1@33958,4H9XI@91061,COG0058@1,COG0058@2	NA|NA|NA	G	Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
PAKBJLMI_00348	272621.LBA0686	0.0	1239.6	Lactobacillaceae	malQ		2.4.1.25,3.2.1.20,3.2.1.41	ko:K00705,ko:K01187,ko:K01200	ko00052,ko00500,ko01100,ko01110,map00052,map00500,map01100,map01110		R00028,R00801,R00802,R02111,R05196,R06087,R06088	RC00028,RC00049,RC00077	ko00000,ko00001,ko01000		CBM48,GH13,GH31,GH77		Bacteria	1TNZ0@1239,3F41N@33958,4HB67@91061,COG0366@1,COG0366@2	NA|NA|NA	G	Belongs to the glycosyl hydrolase 13 family
PAKBJLMI_00349	272621.LBA0687	0.0	1154.0	Lactobacillaceae	pgm	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464	5.4.2.2,5.4.2.8	ko:K01835,ko:K01840	ko00010,ko00030,ko00051,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00051,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130	M00114,M00549	R00959,R01057,R01818,R08639	RC00408	ko00000,ko00001,ko00002,ko01000				Bacteria	1TP2N@1239,3F457@33958,4HADU@91061,COG1109@1,COG1109@2	NA|NA|NA	G	Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
PAKBJLMI_00350	272621.LBA0688	0.0	1333.5	Lactobacillaceae	uvrB			ko:K03702,ko:K08999	ko03420,map03420				ko00000,ko00001,ko03400				Bacteria	1TPKB@1239,3F3XM@33958,4HB81@91061,COG0556@1,COG0556@2	NA|NA|NA	L	damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
PAKBJLMI_00351	272621.LBA0689	0.0	1885.9	Lactobacillaceae	uvrA			ko:K03701	ko03420,map03420				ko00000,ko00001,ko03400				Bacteria	1TPIJ@1239,3F4TZ@33958,4HAW9@91061,COG0178@1,COG0178@2	NA|NA|NA	L	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
PAKBJLMI_00352	272621.LBA0690	1.1e-90	339.3	Lactobacillaceae													Bacteria	1V759@1239,3F58J@33958,4HK5F@91061,COG3247@1,COG3247@2	NA|NA|NA	S	Short repeat of unknown function (DUF308)
PAKBJLMI_00353	272621.LBA0691	3.6e-91	340.9	Lactobacillaceae	rapZ	GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0034641,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363		ko:K06958					ko00000,ko03019				Bacteria	1TPS4@1239,3F4NY@33958,4H9KM@91061,COG1660@1,COG1660@2	NA|NA|NA	S	Displays ATPase and GTPase activities
PAKBJLMI_00354	272621.LBA0691	2.8e-63	247.7	Lactobacillaceae	rapZ	GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0034641,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363		ko:K06958					ko00000,ko03019				Bacteria	1TPS4@1239,3F4NY@33958,4H9KM@91061,COG1660@1,COG1660@2	NA|NA|NA	S	Displays ATPase and GTPase activities
PAKBJLMI_00355	272621.LBA0692	8.1e-196	689.5	Lactobacillaceae	ybhK												Bacteria	1TPNV@1239,3F4D5@33958,4HA0Z@91061,COG0391@1,COG0391@2	NA|NA|NA	S	Required for morphogenesis under gluconeogenic growth conditions
PAKBJLMI_00356	272621.LBA0693	6.8e-170	603.2	Lactobacillaceae	whiA	GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0030312,GO:0043937,GO:0044464,GO:0050789,GO:0050793,GO:0065007,GO:0071944		ko:K09762					ko00000				Bacteria	1TP2X@1239,3F4AB@33958,4HB4H@91061,COG1481@1,COG1481@2	NA|NA|NA	K	May be required for sporulation
PAKBJLMI_00357	272621.LBA0694	4.7e-100	370.5	Lactobacillaceae	clpP	GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005515,GO:0006355,GO:0006508,GO:0006515,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019219,GO:0019222,GO:0019538,GO:0030163,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0042623,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051603,GO:0060255,GO:0065007,GO:0070011,GO:0071704,GO:0080090,GO:0140096,GO:1901564,GO:1901565,GO:1901575,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141	3.4.21.92	ko:K01358	ko04112,ko04212,map04112,map04212				ko00000,ko00001,ko01000,ko01002				Bacteria	1TQ91@1239,3F3M0@33958,4HA8J@91061,COG0740@1,COG0740@2	NA|NA|NA	O	Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
PAKBJLMI_00358	272621.LBA0695	0.0	1086.2	Lactobacillaceae													Bacteria	1W1FZ@1239,2FIUN@1,34AK2@2,3F4QV@33958,4HYXZ@91061	NA|NA|NA	S	SH3-like domain
PAKBJLMI_00359	272621.LBA0696	1.3e-276	958.4	Lactobacillaceae	ycaM			ko:K20265	ko02024,map02024				ko00000,ko00001,ko02000	2.A.3.7.1,2.A.3.7.3			Bacteria	1TRFS@1239,3FCAH@33958,4HBIP@91061,COG0531@1,COG0531@2	NA|NA|NA	E	amino acid
PAKBJLMI_00361	272621.LBA0697	8.6e-190	669.5	Lactobacillaceae	cggR			ko:K05311					ko00000,ko03000				Bacteria	1TP62@1239,3F53Y@33958,4HAE6@91061,COG2390@1,COG2390@2	NA|NA|NA	K	Putative sugar-binding domain
PAKBJLMI_00362	272621.LBA0698	3.8e-190	670.6	Lactobacillaceae	gap	GO:0000166,GO:0003674,GO:0003824,GO:0004365,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006735,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009986,GO:0009987,GO:0016491,GO:0016620,GO:0016903,GO:0019362,GO:0019637,GO:0019674,GO:0022610,GO:0034641,GO:0036094,GO:0043891,GO:0044237,GO:0044238,GO:0044281,GO:0044403,GO:0044406,GO:0044419,GO:0044424,GO:0044464,GO:0044650,GO:0046483,GO:0046496,GO:0048037,GO:0050662,GO:0051186,GO:0051287,GO:0051704,GO:0055086,GO:0055114,GO:0071704,GO:0072524,GO:0097159,GO:0140030,GO:0140032,GO:1901265,GO:1901360,GO:1901363,GO:1901564	1.2.1.12	ko:K00134	ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010	M00001,M00002,M00003,M00165,M00166,M00308,M00552	R01061	RC00149	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147			iJR904.b1416,iJR904.b1417	Bacteria	1TNYU@1239,3F3JS@33958,4H9NS@91061,COG0057@1,COG0057@2	NA|NA|NA	G	Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
PAKBJLMI_00363	272621.LBA0699	3.5e-227	793.9	Lactobacillaceae	pgk	GO:0001871,GO:0002020,GO:0003674,GO:0003824,GO:0004618,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009893,GO:0009986,GO:0009987,GO:0010468,GO:0010604,GO:0010628,GO:0010755,GO:0010756,GO:0010954,GO:0016052,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0017144,GO:0018130,GO:0019222,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0019899,GO:0030162,GO:0030193,GO:0030195,GO:0030246,GO:0030247,GO:0030312,GO:0031323,GO:0031325,GO:0032101,GO:0032102,GO:0032268,GO:0032270,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0043532,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0045862,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0048518,GO:0048519,GO:0048522,GO:0048583,GO:0048585,GO:0050789,GO:0050794,GO:0050818,GO:0050819,GO:0050878,GO:0051171,GO:0051173,GO:0051186,GO:0051188,GO:0051239,GO:0051241,GO:0051246,GO:0051247,GO:0051917,GO:0051919,GO:0055086,GO:0060255,GO:0061041,GO:0061045,GO:0065007,GO:0065008,GO:0070613,GO:0071704,GO:0071944,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0080090,GO:0080134,GO:0090407,GO:1900046,GO:1900047,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1903034,GO:1903035,GO:1903317,GO:1903319,GO:2001065	2.7.2.3,5.3.1.1	ko:K00927,ko:K01803	ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230	M00001,M00002,M00003,M00165,M00166,M00308,M00552	R01015,R01512	RC00002,RC00043,RC00423	ko00000,ko00001,ko00002,ko01000,ko04147			iSB619.SA_RS04145	Bacteria	1TP3H@1239,3F3SC@33958,4H9R3@91061,COG0126@1,COG0126@2	NA|NA|NA	F	Belongs to the phosphoglycerate kinase family
PAKBJLMI_00364	272621.LBA0700	9.9e-143	512.7	Lactobacillaceae	tpiA	GO:0003674,GO:0003824,GO:0004807,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006066,GO:0006071,GO:0006081,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019400,GO:0019405,GO:0019438,GO:0019439,GO:0019563,GO:0019637,GO:0019682,GO:0019693,GO:0019751,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044275,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046164,GO:0046166,GO:0046174,GO:0046184,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901615,GO:1901616	2.7.2.3,5.3.1.1	ko:K00927,ko:K01803	ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230	M00001,M00002,M00003,M00165,M00166,M00308,M00552	R01015,R01512	RC00002,RC00043,RC00423	ko00000,ko00001,ko00002,ko01000,ko04147			iHN637.CLJU_RS19265	Bacteria	1TP2F@1239,3F494@33958,4HAPT@91061,COG0149@1,COG0149@2	NA|NA|NA	G	Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
PAKBJLMI_00365	272621.LBA0701	4.6e-38	163.3	Lactobacillaceae													Bacteria	1U5NS@1239,29NVF@1,309TI@2,3F68I@33958,4IFDC@91061	NA|NA|NA		
PAKBJLMI_00366	272621.LBA0702	3.1e-156	557.8	Lactobacillaceae	ycsE												Bacteria	1V5FB@1239,3F58Y@33958,4HGY8@91061,COG0561@1,COG0561@2	NA|NA|NA	S	Sucrose-6F-phosphate phosphohydrolase
PAKBJLMI_00367	272621.LBA0703	2.6e-137	494.6	Lactobacillaceae	ung	GO:0003674,GO:0003824,GO:0004844,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006285,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097506,GO:0097510,GO:0140097,GO:1901360	3.2.2.27	ko:K03648	ko03410,ko05340,map03410,map05340				ko00000,ko00001,ko01000,ko03400				Bacteria	1TPSN@1239,3F3W0@33958,4HBTR@91061,COG0692@1,COG0692@2	NA|NA|NA	L	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
PAKBJLMI_00368	272621.LBA0704	1.8e-181	641.7	Lactobacillaceae	pta		2.3.1.8,3.6.3.21	ko:K00625,ko:K02028,ko:K13788	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	M00236,M00357,M00579	R00230,R00921	RC00004,RC02746,RC02816	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.3		iSB619.SA_RS03155	Bacteria	1TPQ0@1239,3F3MW@33958,4H9VH@91061,COG0280@1,COG0280@2	NA|NA|NA	C	phosphate acetyltransferase
PAKBJLMI_00369	272621.LBA0705	4.1e-86	323.9	Lactobacillaceae	ydiB	GO:0002949,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0034470,GO:0034641,GO:0034660,GO:0040007,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360	2.7.1.221,5.1.1.1	ko:K01775,ko:K06925,ko:K07102	ko00473,ko00520,ko01100,ko01502,map00473,map00520,map01100,map01502		R00401,R08968,R11024	RC00002,RC00078,RC00285	ko00000,ko00001,ko01000,ko01011,ko03016				Bacteria	1V6CV@1239,3F3MR@33958,4HIIF@91061,COG0802@1,COG0802@2	NA|NA|NA	O	Hydrolase, P-loop family
PAKBJLMI_00370	272621.LBA0706	1e-98	365.9	Lactobacillaceae	dnaQ		2.7.7.7	ko:K02342	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400				Bacteria	1V57H@1239,3F42Z@33958,4HI1V@91061,COG0847@1,COG0847@2	NA|NA|NA	L	DNA polymerase III
PAKBJLMI_00371	272621.LBA0708	2.4e-164	584.7	Lactobacillaceae	murB		1.3.1.98	ko:K00075	ko00520,ko00550,ko01100,map00520,map00550,map01100		R03191,R03192	RC02639	ko00000,ko00001,ko01000,ko01011				Bacteria	1TP3W@1239,3F40T@33958,4HAD8@91061,COG0812@1,COG0812@2	NA|NA|NA	M	Cell wall formation
PAKBJLMI_00372	272621.LBA0709	9.1e-206	722.6	Lactobacillaceae	potA		3.6.3.30,3.6.3.31	ko:K02010,ko:K11072	ko02010,map02010	M00190,M00299			ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.10,3.A.1.11.1		iSB619.SA_RS05380	Bacteria	1TP2M@1239,3F40H@33958,4H9MS@91061,COG3842@1,COG3842@2	NA|NA|NA	P	Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
PAKBJLMI_00373	272621.LBA0711	1.1e-136	492.7	Lactobacillaceae	potB			ko:K11071	ko02010,map02010	M00299			ko00000,ko00001,ko00002,ko02000	3.A.1.11.1			Bacteria	1TQ7Z@1239,3F4CM@33958,4HAYS@91061,COG1176@1,COG1176@2	NA|NA|NA	P	ABC transporter permease
PAKBJLMI_00374	272621.LBA0712	2.9e-132	478.0	Lactobacillaceae	potC	GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008324,GO:0008519,GO:0015075,GO:0015101,GO:0015203,GO:0015399,GO:0015405,GO:0015417,GO:0015595,GO:0015606,GO:0015695,GO:0015696,GO:0015846,GO:0015847,GO:0015848,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0031224,GO:0031226,GO:0032991,GO:0034220,GO:0042623,GO:0042626,GO:0043190,GO:0043492,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0072488,GO:0098533,GO:0098655,GO:0098796,GO:0098797,GO:1902047,GO:1902494,GO:1902495,GO:1903711,GO:1904949,GO:1990351		ko:K11070	ko02010,map02010	M00299			ko00000,ko00001,ko00002,ko02000	3.A.1.11.1		iSBO_1134.SBO_1939	Bacteria	1V0VD@1239,3F3ZN@33958,4H9ZC@91061,COG1177@1,COG1177@2	NA|NA|NA	P	ABC transporter permease
PAKBJLMI_00375	272621.LBA0713	1e-206	725.7	Lactobacillaceae	potD			ko:K11069	ko02010,map02010	M00299			ko00000,ko00001,ko00002,ko02000	3.A.1.11.1		iSB619.SA_RS05395	Bacteria	1TPY1@1239,3F3W1@33958,4HAET@91061,COG0687@1,COG0687@2	NA|NA|NA	P	ABC transporter
PAKBJLMI_00376	272621.LBA0714	1.1e-150	539.3	Lactobacillaceae	dacA	GO:0003674,GO:0003824,GO:0004016,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0009975,GO:0016020,GO:0016021,GO:0016829,GO:0016849,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944	2.7.7.85	ko:K18672					ko00000,ko01000				Bacteria	1TPRW@1239,3F4N3@33958,4H9XZ@91061,COG1624@1,COG1624@2	NA|NA|NA	S	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
PAKBJLMI_00377	272621.LBA0715	1.2e-172	612.5	Lactobacillaceae	ybbR	GO:0008150,GO:0031279,GO:0031281,GO:0043085,GO:0044093,GO:0045761,GO:0045762,GO:0050790,GO:0051339,GO:0051349,GO:0065007,GO:0065009											Bacteria	1TSIV@1239,3F41C@33958,4HD8Y@91061,COG4856@1,COG4856@2	NA|NA|NA	S	YbbR-like protein
PAKBJLMI_00378	272621.LBA0716	3.9e-259	900.2	Lactobacillaceae	glmM	GO:0003674,GO:0003824,GO:0004614,GO:0004615,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006040,GO:0006047,GO:0006048,GO:0006139,GO:0006464,GO:0006468,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008966,GO:0009058,GO:0009225,GO:0009226,GO:0009987,GO:0016310,GO:0016853,GO:0016866,GO:0016868,GO:0018130,GO:0019438,GO:0019538,GO:0034641,GO:0034654,GO:0036211,GO:0040007,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046349,GO:0046483,GO:0046777,GO:0055086,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901576	5.4.2.10	ko:K03431	ko00520,ko01100,ko01130,map00520,map01100,map01130		R02060	RC00408	ko00000,ko00001,ko01000			iSB619.SA_RS11275,iSBO_1134.SBO_3206	Bacteria	1TP1X@1239,3F3W5@33958,4HB16@91061,COG1109@1,COG1109@2	NA|NA|NA	G	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
PAKBJLMI_00379	272621.LBA0717	1.3e-148	532.3	Lactobacillaceae													Bacteria	1TR16@1239,3F55S@33958,4HCZ6@91061,COG0561@1,COG0561@2	NA|NA|NA	S	hydrolase
PAKBJLMI_00380	272621.LBA0718	1.3e-145	522.3	Lactobacillaceae													Bacteria	1U3W2@1239,3FC85@33958,4HM9S@91061,COG0561@1,COG0561@2	NA|NA|NA	S	Sucrose-6F-phosphate phosphohydrolase
PAKBJLMI_00381	272621.LBA0720	1e-120	439.5	Lactobacillaceae													Bacteria	1U56K@1239,29NKW@1,309IV@2,3F4Y0@33958,4IEXT@91061	NA|NA|NA		
PAKBJLMI_00382	272621.LBA0722	1.2e-73	282.3	Lactobacillaceae	ptpA		3.1.3.48	ko:K01104,ko:K20945	ko05111,map05111				ko00000,ko00001,ko01000				Bacteria	1V6SG@1239,3F74A@33958,4HIZN@91061,COG0394@1,COG0394@2	NA|NA|NA	T	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
PAKBJLMI_00383	272621.LBA0723	6.7e-212	743.0	Lactobacillaceae	glxK		2.7.1.165	ko:K00865	ko00260,ko00561,ko00630,ko01100,ko01120,ko01130,map00260,map00561,map00630,map01100,map01120,map01130		R08572	RC00002,RC00428	ko00000,ko00001,ko01000				Bacteria	1TPSI@1239,3F3V2@33958,4HA91@91061,COG1929@1,COG1929@2	NA|NA|NA	G	Belongs to the glycerate kinase type-1 family
PAKBJLMI_00384	272621.LBA0724	3.4e-152	544.3	Lactobacillaceae	licT			ko:K02538,ko:K03488					ko00000,ko03000				Bacteria	1TT5A@1239,3F4SJ@33958,4HC5Y@91061,COG3711@1,COG3711@2	NA|NA|NA	K	CAT RNA binding domain
PAKBJLMI_00385	272621.LBA0725	0.0	1271.5	Lactobacillaceae	bglP		2.7.1.208,2.7.1.211	ko:K02749,ko:K02750,ko:K02755,ko:K02756,ko:K02757,ko:K02808,ko:K02809,ko:K02810	ko00500,ko02060,map00500,map02060	M00268,M00269,M00271	R00811,R04111	RC00017,RC03206	ko00000,ko00001,ko00002,ko01000,ko02000	4.A.1.1.10,4.A.1.1.16,4.A.1.1.4,4.A.1.1.8,4.A.1.2.1,4.A.1.2.10,4.A.1.2.11,4.A.1.2.12,4.A.1.2.2,4.A.1.2.5,4.A.1.2.6,4.A.1.2.9			Bacteria	1TP5X@1239,3F458@33958,4HA0I@91061,COG1263@1,COG1263@2,COG1264@1,COG1264@2,COG2190@1,COG2190@2	NA|NA|NA	G	phosphotransferase system
PAKBJLMI_00386	272621.LBA0726	3.1e-286	990.3	Lactobacillaceae			3.2.1.86	ko:K01223	ko00010,ko00500,map00010,map00500		R00839,R05133,R05134	RC00049,RC00171,RC00714	ko00000,ko00001,ko01000		GT1		Bacteria	1TP19@1239,3F3PQ@33958,4HA1W@91061,COG2723@1,COG2723@2	NA|NA|NA	G	Belongs to the glycosyl hydrolase 1 family
PAKBJLMI_00387	272621.LBA0728	4.2e-175	620.5	Lactobacillaceae				ko:K06889					ko00000				Bacteria	1TQYU@1239,3F43H@33958,4HC4H@91061,COG1073@1,COG1073@2	NA|NA|NA	D	Alpha beta
PAKBJLMI_00388	272621.LBA0729	0.0	1078.5	Lactobacillaceae				ko:K20265	ko02024,map02024				ko00000,ko00001,ko02000	2.A.3.7.1,2.A.3.7.3			Bacteria	1VT70@1239,3FCAG@33958,4HUMC@91061,COG0531@1,COG0531@2	NA|NA|NA	E	Amino acid permease
PAKBJLMI_00390	1423754.BALY01000055_gene1821	2.2e-27	127.5	Lactobacillaceae	rpsN	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904		ko:K02954	ko03010,map03010	M00178,M00179			br01610,ko00000,ko00001,ko00002,ko03011				Bacteria	1VEF6@1239,3F7TS@33958,4HNKX@91061,COG0199@1,COG0199@2	NA|NA|NA	J	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PAKBJLMI_00391	272621.LBA0732	1.9e-92	345.1	Lactobacillaceae													Bacteria	1VF6Q@1239,3F57S@33958,4HMDE@91061,COG5652@1,COG5652@2	NA|NA|NA	S	VanZ like family
PAKBJLMI_00392	272621.LBA0733	2e-132	478.4	Lactobacillaceae	yebC	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0009314,GO:0009628,GO:0010212,GO:0044424,GO:0044444,GO:0044464,GO:0050896											Bacteria	1TPP5@1239,3F4WF@33958,4H9WJ@91061,COG0217@1,COG0217@2	NA|NA|NA	K	Transcriptional regulatory protein
PAKBJLMI_00393	272621.LBA0734	7.9e-23	112.5	Lactobacillaceae	comGA			ko:K02243		M00429			ko00000,ko00002,ko02044	3.A.14.1			Bacteria	1TPGE@1239,3F4HY@33958,4HB0C@91061,COG2804@1,COG2804@2	NA|NA|NA	NU	Type II IV secretion system protein
PAKBJLMI_00394	272621.LBA0734	1.7e-142	511.9	Lactobacillaceae	comGA			ko:K02243		M00429			ko00000,ko00002,ko02044	3.A.14.1			Bacteria	1TPGE@1239,3F4HY@33958,4HB0C@91061,COG2804@1,COG2804@2	NA|NA|NA	NU	Type II IV secretion system protein
PAKBJLMI_00395	272621.LBA0735	9.9e-175	619.4	Lactobacillaceae	comGB			ko:K02244		M00429			ko00000,ko00002,ko02044	3.A.14.1			Bacteria	1U00C@1239,3F3S9@33958,4HGUA@91061,COG1459@1,COG1459@2	NA|NA|NA	NU	type II secretion system
PAKBJLMI_00396	272621.LBA0737	2.4e-46	191.4	Lactobacillaceae	comGC	GO:0005575,GO:0005623,GO:0005886,GO:0009986,GO:0016020,GO:0044464,GO:0071944		ko:K02245,ko:K02456	ko03070,ko05111,map03070,map05111	M00331,M00429			ko00000,ko00001,ko00002,ko02044	3.A.15			Bacteria	1VFI9@1239,3F7ZC@33958,4HNNT@91061,COG4537@1,COG4537@2	NA|NA|NA	U	competence protein ComGC
PAKBJLMI_00397	272621.LBA0738	2e-71	275.0	Lactobacillaceae				ko:K02246		M00429			ko00000,ko00002,ko02044				Bacteria	1U645@1239,29ZCH@1,30MB3@2,3F6ZT@33958,4IFTR@91061	NA|NA|NA		
PAKBJLMI_00398	525365.HMPREF0548_0768	1e-19	102.4	Lactobacillaceae													Bacteria	1U6G6@1239,2BS3U@1,32M4K@2,3F7UI@33958,4IG89@91061	NA|NA|NA		
PAKBJLMI_00399	272621.LBA0739	1.3e-86	325.9	Lactobacillaceae	comGF			ko:K02246,ko:K02248		M00429			ko00000,ko00002,ko02044				Bacteria	1U6NI@1239,3F87B@33958,4IGFH@91061,COG4940@1,COG4940@2	NA|NA|NA	U	Putative Competence protein ComGF
PAKBJLMI_00400	272621.LBA0740	3e-187	661.0	Lactobacillaceae	ytxK		2.1.1.72	ko:K00571					ko00000,ko01000,ko02048				Bacteria	1TRIQ@1239,3F4CI@33958,4H9SE@91061,COG0827@1,COG0827@2	NA|NA|NA	L	N-6 DNA Methylase
PAKBJLMI_00401	272621.LBA0741	2.7e-219	767.7	Lactobacillaceae	ackA	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464	2.7.2.1	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	M00357,M00579	R00315,R01353	RC00002,RC00043	ko00000,ko00001,ko00002,ko01000			iNJ661.Rv0409	Bacteria	1TQ22@1239,3F48Z@33958,4HA7K@91061,COG0282@1,COG0282@2	NA|NA|NA	F	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PAKBJLMI_00403	272621.LBA0742	4.3e-121	441.0	Lactobacillaceae													Bacteria	1TQXN@1239,3F4Y5@33958,4HBHT@91061,COG5434@1,COG5434@2	NA|NA|NA	M	Protein of unknown function (DUF3737)
PAKBJLMI_00404	272621.LBA0743	8.1e-176	622.9	Lactobacillaceae	patB		4.4.1.8	ko:K14155	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230		R00782,R01286,R02408,R04941	RC00056,RC00069,RC00382,RC00488,RC00710,RC01245,RC02303	ko00000,ko00001,ko01000,ko01007				Bacteria	1TP5G@1239,3F4JX@33958,4H9PE@91061,COG1168@1,COG1168@2	NA|NA|NA	E	Aminotransferase, class I
PAKBJLMI_00405	272621.LBA0744	5.7e-29	132.9	Bacteria			4.4.1.8	ko:K14155	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230		R00782,R01286,R02408,R04941	RC00056,RC00069,RC00382,RC00488,RC00710,RC01245,RC02303	ko00000,ko00001,ko01000,ko01007				Bacteria	COG1168@1,COG1168@2	NA|NA|NA	E	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
PAKBJLMI_00406	272621.LBA0745	2.3e-192	677.9	Lactobacillaceae	manA		5.3.1.8	ko:K01809	ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130	M00114	R01819	RC00376	ko00000,ko00001,ko00002,ko01000				Bacteria	1VRGI@1239,3F40I@33958,4HBFW@91061,COG1482@1,COG1482@2	NA|NA|NA	G	mannose-6-phosphate isomerase
PAKBJLMI_00407	891391.LAC30SC_03740	4.9e-61	240.4	Lactobacillaceae													Bacteria	1VKM4@1239,2ZY3R@2,3F6IB@33958,4I0CM@91061,COG5658@1	NA|NA|NA	S	SdpI/YhfL protein family
PAKBJLMI_00408	272621.LBA0746	1.4e-95	355.5	Lactobacillaceae													Bacteria	1TPZ0@1239,3FC92@33958,4HA7D@91061,COG0745@1,COG0745@2	NA|NA|NA	K	Transcriptional regulatory protein, C terminal
PAKBJLMI_00409	272621.LBA0747	6.2e-271	939.5	Lactobacillaceae													Bacteria	1V10X@1239,3F3Z4@33958,4H9UD@91061,COG0642@1,COG2205@2	NA|NA|NA	T	PhoQ Sensor
PAKBJLMI_00410	272621.LBA0748	1.6e-61	241.9	Lactobacillaceae	limB		1.14.13.107,1.14.13.162	ko:K14733,ko:K21731	ko00903,map00903		R06398,R09385,R09389,R09393	RC01506	ko00000,ko00001,ko01000				Bacteria	1TRBN@1239,3F4KZ@33958,4HBYT@91061,COG2141@1,COG2141@2	NA|NA|NA	C	Luciferase-like monooxygenase
PAKBJLMI_00411	272621.LBA0749	2.2e-123	448.4	Lactobacillaceae	XK27_00915												Bacteria	1TRBN@1239,3F4KZ@33958,4HBYT@91061,COG2141@1,COG2141@2	NA|NA|NA	C	Luciferase-like monooxygenase
PAKBJLMI_00412	272621.LBA0750	0.0	1426.0	Lactobacillaceae	ltaS	GO:0005575,GO:0005576	2.7.8.20	ko:K01138,ko:K19005	ko00561,ko01100,map00561,map01100		R05081,R10849	RC00017	ko00000,ko00001,ko01000				Bacteria	1TRMA@1239,3F3R7@33958,4H9S0@91061,COG1368@1,COG1368@2	NA|NA|NA	M	Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
PAKBJLMI_00413	272621.LBA0751	4.1e-107	394.0	Lactobacillaceae	vanZ												Bacteria	1VK3A@1239,3F5EN@33958,4HPCD@91061,COG4767@1,COG4767@2	NA|NA|NA	V	VanZ like family
PAKBJLMI_00414	272621.LBA0752	1.6e-260	904.8	Lactobacillaceae	pgi	GO:0003674,GO:0003824,GO:0004347,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0005996,GO:0006006,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046031,GO:0046034,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576	5.3.1.9	ko:K01810	ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200	M00001,M00004,M00114	R02739,R02740,R03321	RC00376,RC00563	ko00000,ko00001,ko00002,ko01000,ko04147			iLJ478.TM1385	Bacteria	1TP29@1239,3F3XK@33958,4H9VI@91061,COG0166@1,COG0166@2	NA|NA|NA	G	Belongs to the GPI family
PAKBJLMI_00415	272621.LBA0753	9.9e-250	869.0	Lactobacillaceae				ko:K18926		M00715			ko00000,ko00002,ko02000	2.A.1.3.30			Bacteria	1UYQB@1239,3F3NG@33958,4HE3Y@91061,COG0477@1,COG2814@2	NA|NA|NA	EGP	Major facilitator Superfamily
PAKBJLMI_00416	272621.LBA0754	1.6e-196	691.8	Lactobacillaceae	ampC												Bacteria	1TNZX@1239,3F3WZ@33958,4IPJT@91061,COG1680@1,COG1680@2	NA|NA|NA	V	Beta-lactamase
PAKBJLMI_00419	272621.LBA0755	2e-64	251.5	Lactobacillaceae													Bacteria	1U7SK@1239,29QAN@1,30B9U@2,3FA46@33958,4IHPZ@91061	NA|NA|NA		
PAKBJLMI_00420	272621.LBA0757	2.9e-287	993.8	Lactobacillaceae				ko:K06919					ko00000				Bacteria	1UYRX@1239,3F71D@33958,4HC06@91061,COG3378@1,COG3378@2	NA|NA|NA	S	DNA primase
PAKBJLMI_00421	272621.LBA0758	1.6e-35	154.8	Lactobacillaceae													Bacteria	1U6BB@1239,2DKPJ@1,30A83@2,3F7I8@33958,4IG2Y@91061	NA|NA|NA		
PAKBJLMI_00422	272621.LBA0759	1.9e-33	147.9	Lactobacillaceae													Bacteria	1U7VP@1239,2AI1N@1,318FD@2,3FA8D@33958,4IHT2@91061	NA|NA|NA		
PAKBJLMI_00423	272621.LBA0760	8.1e-69	266.2	Lactobacillaceae													Bacteria	1U8BZ@1239,2BF94@1,3291Z@2,3FATG@33958,4II9Y@91061	NA|NA|NA		
PAKBJLMI_00424	272621.LBA0761	1.4e-36	158.3	Lactobacillaceae													Bacteria	1U7S1@1239,29QAA@1,30B9F@2,3FA3F@33958,4IHPD@91061	NA|NA|NA		
PAKBJLMI_00425	575594.ACOH01000010_gene1680	2.9e-12	77.4	Lactobacillaceae													Bacteria	1U701@1239,2DKTD@1,30AQY@2,3F8SS@33958,4IGUB@91061	NA|NA|NA	S	Helix-turn-helix domain
PAKBJLMI_00426	326425.lhe_0768	3.2e-58	231.5	Firmicutes													Bacteria	1VK84@1239,COG1396@1,COG1396@2	NA|NA|NA	K	Transcriptional
PAKBJLMI_00427	272621.LBA0764	9.5e-208	729.2	Lactobacillaceae	sip												Bacteria	1TTJI@1239,3F4IB@33958,4HDG6@91061,COG0582@1,COG0582@2	NA|NA|NA	L	Belongs to the 'phage' integrase family
PAKBJLMI_00428	272621.LBA0765	2e-263	914.4	Lactobacillaceae	murF		6.3.2.10,6.3.2.13	ko:K01928,ko:K01929	ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502		R02788,R04573,R04617	RC00064,RC00090,RC00141	ko00000,ko00001,ko01000,ko01011				Bacteria	1TRG9@1239,3FBS5@33958,4HAMY@91061,COG0770@1,COG0770@2	NA|NA|NA	M	Domain of unknown function (DUF1727)
PAKBJLMI_00429	272621.LBA0766	4.5e-114	417.2	Lactobacillaceae	tdk	GO:0003674,GO:0003824,GO:0004797,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006213,GO:0006259,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009120,GO:0009123,GO:0009124,GO:0009157,GO:0009162,GO:0009165,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0018130,GO:0019136,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046104,GO:0046125,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0090304,GO:0090407,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657	2.7.1.21	ko:K00857	ko00240,ko00983,ko01100,map00240,map00983,map01100		R01567,R02099,R08233	RC00002,RC00017	ko00000,ko00001,ko01000			iAF1260.b1238,iBWG_1329.BWG_1065,iECDH10B_1368.ECDH10B_1298,iECDH1ME8569_1439.ECDH1ME8569_1176,iEcDH1_1363.EcDH1_2411,iJO1366.b1238,iJR904.b1238,iPC815.YPO2176,iY75_1357.Y75_RS06470	Bacteria	1TRVM@1239,3F4UE@33958,4HA4A@91061,COG1435@1,COG1435@2	NA|NA|NA	F	thymidine kinase
PAKBJLMI_00430	272621.LBA0767	3.4e-181	641.0	Lactobacillaceae	prfA			ko:K02835					ko00000,ko03012				Bacteria	1TQ7V@1239,3F3Q0@33958,4H9MB@91061,COG0216@1,COG0216@2	NA|NA|NA	J	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
PAKBJLMI_00431	272621.LBA0768	7.8e-157	559.7	Lactobacillaceae	prmB	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006304,GO:0006305,GO:0006306,GO:0006464,GO:0006479,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009007,GO:0009008,GO:0009987,GO:0016740,GO:0016741,GO:0018364,GO:0019538,GO:0032259,GO:0032775,GO:0034641,GO:0036009,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0044728,GO:0046483,GO:0071704,GO:0090304,GO:0140096,GO:0140097,GO:1901360,GO:1901564	2.1.1.297,2.1.1.298	ko:K02493,ko:K07320			R10806	RC00003,RC03279	ko00000,ko01000,ko03009,ko03012				Bacteria	1TSMA@1239,3F460@33958,4HC6W@91061,COG2890@1,COG2890@2	NA|NA|NA	J	Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
PAKBJLMI_00432	272621.LBA0769	3.7e-190	670.6	Lactobacillaceae	ywlC	GO:0000049,GO:0000166,GO:0002949,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006450,GO:0006725,GO:0006807,GO:0008033,GO:0008144,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0017076,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034470,GO:0034641,GO:0034660,GO:0035639,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0065007,GO:0065008,GO:0070525,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363	2.7.7.87,3.1.3.48	ko:K01104,ko:K07566			R10463	RC00745	ko00000,ko01000,ko03009,ko03016				Bacteria	1TP1I@1239,3F3T1@33958,4HA7W@91061,COG0009@1,COG0009@2	NA|NA|NA	J	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
PAKBJLMI_00433	272621.LBA0770	4e-113	414.1	Lactobacillaceae	upp	GO:0003674,GO:0003824,GO:0004849,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006213,GO:0006220,GO:0006221,GO:0006222,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008655,GO:0009058,GO:0009112,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009173,GO:0009174,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0018130,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0043094,GO:0043097,GO:0043174,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046049,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659	2.4.2.9	ko:K00761	ko00240,ko01100,map00240,map01100		R00966	RC00063	ko00000,ko00001,ko01000			iSB619.SA_RS11010	Bacteria	1TPMT@1239,3F4M0@33958,4H9Y0@91061,COG0035@1,COG0035@2	NA|NA|NA	F	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
PAKBJLMI_00434	272621.LBA0772	1e-128	466.1	Lactobacillaceae	atpB	GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0005887,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016021,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0031224,GO:0031226,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0042777,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045260,GO:0045263,GO:0045264,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600		ko:K02108	ko00190,ko00195,ko01100,map00190,map00195,map01100	M00157			ko00000,ko00001,ko00002,ko00194,ko03110	3.A.2.1		iAPECO1_1312.APECO1_2725,iE2348C_1286.E2348C_4048,iEC042_1314.EC042_4125,iECABU_c1320.ECABU_c42230,iECED1_1282.ECED1_4428,iECIAI39_1322.ECIAI39_4342,iECNA114_1301.ECNA114_3887,iECOK1_1307.ECOK1_4187,iECP_1309.ECP_3937,iECS88_1305.ECS88_4160,iECSF_1327.ECSF_3586,iECUMN_1333.ECUMN_4268,iEcSMS35_1347.EcSMS35_4106,iLF82_1304.LF82_0192,iNRG857_1313.NRG857_18615,iUMN146_1321.UM146_18880,iUMNK88_1353.UMNK88_4550,iUTI89_1310.UTI89_C4293,ic_1306.c4666	Bacteria	1TQIT@1239,3F3RE@33958,4H9NV@91061,COG0356@1,COG0356@2	NA|NA|NA	C	it plays a direct role in the translocation of protons across the membrane
PAKBJLMI_00435	272621.LBA0773	6.6e-29	132.9	Lactobacillaceae	atpE	GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600		ko:K02110	ko00190,ko00195,ko01100,map00190,map00195,map01100	M00157			ko00000,ko00001,ko00002,ko00194	3.A.2.1			Bacteria	1VEHP@1239,3F82A@33958,4HNKQ@91061,COG0636@1,COG0636@2	NA|NA|NA	C	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PAKBJLMI_00436	272621.LBA0774	1.7e-50	205.7	Lactobacillaceae	atpF			ko:K02109	ko00190,ko00195,ko01100,map00190,map00195,map01100	M00157			ko00000,ko00001,ko00002,ko00194	3.A.2.1		iHN637.CLJU_RS01170,iYO844.BSU36850	Bacteria	1VB85@1239,3F5M8@33958,4HM64@91061,COG0711@1,COG0711@2	NA|NA|NA	C	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
PAKBJLMI_00437	272621.LBA0775	1.5e-92	345.5	Lactobacillaceae	atpH	GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0030312,GO:0040007,GO:0044464,GO:0071944		ko:K02109,ko:K02113	ko00190,ko00195,ko01100,map00190,map00195,map01100	M00157			ko00000,ko00001,ko00002,ko00194	3.A.2.1			Bacteria	1VAG3@1239,3F5TZ@33958,4HKFW@91061,COG0712@1,COG0712@2	NA|NA|NA	C	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PAKBJLMI_00438	272621.LBA0776	2.2e-282	977.6	Lactobacillaceae	atpA	GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030312,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0040007,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045260,GO:0045261,GO:0045262,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600	3.6.3.14	ko:K02111	ko00190,ko00195,ko01100,map00190,map00195,map01100	M00157			ko00000,ko00001,ko00002,ko00194,ko01000	3.A.2.1		iIT341.HP1134,iSB619.SA_RS10975,iSbBS512_1146.SbBS512_E4187	Bacteria	1TNZ8@1239,3F3R4@33958,4HAMZ@91061,COG0056@1,COG0056@2	NA|NA|NA	C	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
PAKBJLMI_00439	272621.LBA0777	9.8e-172	609.4	Lactobacillaceae	atpG	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944		ko:K02115	ko00190,ko00195,ko01100,map00190,map00195,map01100	M00157			ko00000,ko00001,ko00002,ko00194	3.A.2.1		iLJ478.TM1611,iSB619.SA_RS10970,iYO844.BSU36820	Bacteria	1TPBX@1239,3F40E@33958,4HB0E@91061,COG0224@1,COG0224@2	NA|NA|NA	C	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
PAKBJLMI_00440	272621.LBA0778	2.1e-255	887.9	Lactobacillaceae	atpD		3.6.3.14	ko:K02112	ko00190,ko00195,ko01100,map00190,map00195,map01100	M00157			ko00000,ko00001,ko00002,ko00194,ko01000	3.A.2.1		iSB619.SA_RS10965	Bacteria	1TPGF@1239,3F3TF@33958,4HAT6@91061,COG0055@1,COG0055@2	NA|NA|NA	C	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
PAKBJLMI_00441	272621.LBA0779	6.9e-64	250.0	Lactobacillaceae	atpC	GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045260,GO:0045261,GO:0045262,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600		ko:K02114	ko00190,ko00195,ko01100,map00190,map00195,map01100	M00157			ko00000,ko00001,ko00002,ko00194	3.A.2.1		iJN746.PP_5412,iSbBS512_1146.SbBS512_E4190	Bacteria	1VA89@1239,3F6I6@33958,4HKHS@91061,COG0355@1,COG0355@2	NA|NA|NA	C	Produces ATP from ADP in the presence of a proton gradient across the membrane
PAKBJLMI_00442	1423748.BALB01000001_gene91	2.6e-30	137.5	Lactobacillaceae	ywzB												Bacteria	1U2FQ@1239,3F831@33958,4HNZX@91061,COG4836@1,COG4836@2	NA|NA|NA	S	Protein of unknown function (DUF1146)
PAKBJLMI_00443	272621.LBA0780	1.9e-178	631.7	Lactobacillaceae	mbl			ko:K03569					ko00000,ko02048,ko03036,ko04812	1.A.33.1,9.B.157.1			Bacteria	1TP51@1239,3F463@33958,4HA4S@91061,COG1077@1,COG1077@2	NA|NA|NA	D	Cell shape determining protein MreB Mrl
PAKBJLMI_00444	891391.LAC30SC_03865	2.5e-49	201.1	Lactobacillaceae	yidD			ko:K08998					ko00000				Bacteria	1VEIG@1239,3F7H1@33958,4HPA3@91061,COG0759@1,COG0759@2	NA|NA|NA	S	Could be involved in insertion of integral membrane proteins into the membrane
PAKBJLMI_00445	272621.LBA0781	1.5e-33	148.3	Lactobacillaceae													Bacteria	1U6BQ@1239,29FEW@1,302CK@2,3F7J3@33958,4IG3B@91061	NA|NA|NA	S	Protein of unknown function (DUF2969)
PAKBJLMI_00446	272621.LBA0782	9.5e-217	759.2	Lactobacillaceae	rodA			ko:K05837					ko00000,ko03036				Bacteria	1TPGH@1239,3F4J4@33958,4HAV4@91061,COG0772@1,COG0772@2	NA|NA|NA	D	Belongs to the SEDS family
PAKBJLMI_00447	272621.LBA0783	5.8e-77	293.5	Lactobacillaceae	uspA			ko:K03499,ko:K06149					ko00000,ko02000	2.A.38.1,2.A.38.4			Bacteria	1V3NY@1239,3F68T@33958,4HIP3@91061,COG0589@1,COG0589@2	NA|NA|NA	T	universal stress protein
PAKBJLMI_00448	748671.LCRIS_00779	4e-33	147.1	Lactobacillaceae													Bacteria	1U6AF@1239,29P9A@1,30A7E@2,3F7FU@33958,4IG1T@91061	NA|NA|NA		
PAKBJLMI_00449	272621.LBA0784	4.2e-242	843.6	Lactobacillaceae	rarA			ko:K07478					ko00000				Bacteria	1TPVV@1239,3F3WF@33958,4HAIS@91061,COG2256@1,COG2256@2	NA|NA|NA	L	recombination factor protein RarA
PAKBJLMI_00450	272621.LBA0785	1.9e-83	315.1	Lactobacillaceae	yueI												Bacteria	1V8ID@1239,3FCEV@33958,4HJTQ@91061,COG5506@1,COG5506@2	NA|NA|NA	S	Protein of unknown function (DUF1694)
PAKBJLMI_00451	272621.LBA0786	1e-110	406.0	Lactobacillaceae	rpsD	GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006417,GO:0006450,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0015935,GO:0019222,GO:0019843,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0032991,GO:0034248,GO:0034250,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0045727,GO:0045903,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0065008,GO:0080090,GO:0097159,GO:1901363,GO:1990904,GO:2000112		ko:K02986	ko03010,map03010	M00178,M00179			br01610,ko00000,ko00001,ko00002,ko03011				Bacteria	1TR0J@1239,3F3P0@33958,4HAC9@91061,COG0522@1,COG0522@2	NA|NA|NA	J	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
PAKBJLMI_00452	272621.LBA0788	1.5e-292	1011.5	Lactobacillaceae	ezrA	GO:0000278,GO:0000281,GO:0000910,GO:0000917,GO:0000918,GO:0000921,GO:0005575,GO:0005623,GO:0005886,GO:0006996,GO:0007010,GO:0007049,GO:0008150,GO:0009987,GO:0016020,GO:0016043,GO:0022402,GO:0022607,GO:0031106,GO:0032185,GO:0032506,GO:0034622,GO:0043933,GO:0044085,GO:0044464,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051301,GO:0051302,GO:0051781,GO:0061640,GO:0065003,GO:0065007,GO:0070925,GO:0071840,GO:0071944,GO:0090529,GO:1902410,GO:1903047		ko:K06286,ko:K07158					ko00000,ko03036				Bacteria	1TQR7@1239,3F47K@33958,4HA15@91061,COG4477@1,COG4477@2	NA|NA|NA	D	modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
PAKBJLMI_00453	272621.LBA0789	1.1e-217	762.3	Lactobacillaceae	iscS2		2.8.1.7	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122		R07460,R11528,R11529	RC01789,RC02313	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029				Bacteria	1TP21@1239,3F4CD@33958,4HAEE@91061,COG1104@1,COG1104@2	NA|NA|NA	E	Aminotransferase class V
PAKBJLMI_00454	272621.LBA0790	5.9e-230	803.1	Lactobacillaceae	thiI	GO:0000049,GO:0002937,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0017144,GO:0018130,GO:0019438,GO:0034227,GO:0034470,GO:0034641,GO:0034660,GO:0042364,GO:0042723,GO:0042724,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:0090304,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576	2.8.1.4	ko:K03151	ko00730,ko01100,ko04122,map00730,map01100,map04122		R07461		ko00000,ko00001,ko01000,ko03016			iECNA114_1301.ECNA114_0400,iECO26_1355.ECO26_0455,iECSF_1327.ECSF_0383,iSDY_1059.SDY_0307	Bacteria	1TPNW@1239,3F3N0@33958,4HAV9@91061,COG0301@1,COG0301@2	NA|NA|NA	H	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
PAKBJLMI_00455	272621.LBA0791	2.2e-128	464.9	Lactobacillaceae	rsuA	GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360	5.4.99.19,5.4.99.22	ko:K06178,ko:K06183					ko00000,ko01000,ko03009				Bacteria	1TQZ2@1239,3F41G@33958,4H9VU@91061,COG1187@1,COG1187@2	NA|NA|NA	J	Belongs to the pseudouridine synthase RsuA family
PAKBJLMI_00456	272621.LBA0794	0.0	1772.7	Lactobacillaceae	valS	GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576	6.1.1.9	ko:K01873	ko00970,map00970	M00359,M00360	R03665	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016			iLJ478.TM1817	Bacteria	1TPN4@1239,3F3RB@33958,4HB85@91061,COG0525@1,COG0525@2	NA|NA|NA	J	amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
PAKBJLMI_00457	272621.LBA0795	6.3e-205	719.9	Lactobacillaceae	folC		6.3.2.12,6.3.2.17	ko:K11754	ko00790,ko01100,map00790,map01100	M00126,M00841	R00942,R02237,R04241	RC00064,RC00090,RC00162	ko00000,ko00001,ko00002,ko01000			iLJ478.TM0166	Bacteria	1TPX5@1239,3F498@33958,4HBJM@91061,COG0285@1,COG0285@2	NA|NA|NA	H	Belongs to the folylpolyglutamate synthase family
PAKBJLMI_00458	272621.LBA0796	8.9e-127	459.5	Lactobacillaceae													Bacteria	1V1N8@1239,3F56K@33958,4HG58@91061,COG0637@1,COG0637@2	NA|NA|NA	S	Haloacid dehalogenase-like hydrolase
PAKBJLMI_00459	272621.LBA0797	1.2e-114	419.1	Lactobacillaceae	radC			ko:K03630					ko00000				Bacteria	1TQ3K@1239,3F5IM@33958,4HB1W@91061,COG2003@1,COG2003@2	NA|NA|NA	L	DNA repair protein
PAKBJLMI_00460	272621.LBA0798	1.1e-176	625.9	Lactobacillaceae	mreB			ko:K03569					ko00000,ko02048,ko03036,ko04812	1.A.33.1,9.B.157.1			Bacteria	1TP51@1239,3F3ZV@33958,4HA4S@91061,COG1077@1,COG1077@2	NA|NA|NA	D	cell shape determining protein MreB
PAKBJLMI_00461	272621.LBA0799	7.2e-150	536.6	Lactobacillaceae	mreC	GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0007163,GO:0008150,GO:0008360,GO:0009273,GO:0009987,GO:0016020,GO:0016021,GO:0022603,GO:0022604,GO:0030428,GO:0031224,GO:0031226,GO:0042546,GO:0043621,GO:0044085,GO:0044425,GO:0044459,GO:0044464,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0065007,GO:0065008,GO:0071554,GO:0071840,GO:0071944,GO:0071963		ko:K03570					ko00000,ko03036	9.B.157.1			Bacteria	1TR1V@1239,3F3MC@33958,4HB0K@91061,COG1792@1,COG1792@2	NA|NA|NA	M	Involved in formation and maintenance of cell shape
PAKBJLMI_00462	272621.LBA0800	7.1e-95	353.2	Lactobacillaceae	mreD			ko:K03571					ko00000,ko03036	9.B.157.1			Bacteria	1U5E6@1239,29NQT@1,309NS@2,3F5PM@33958,4IF5G@91061	NA|NA|NA		
PAKBJLMI_00463	1423748.BALB01000001_gene50	8.8e-10	68.6	Lactobacillaceae													Bacteria	1TV7P@1239,29GVY@1,303TQ@2,3F8AT@33958,4I8MD@91061	NA|NA|NA	S	Protein of unknown function (DUF4044)
PAKBJLMI_00464	272621.LBA0802	3.2e-53	214.2	Lactobacillaceae													Bacteria	1U6DY@1239,2A5PG@1,30UEB@2,3F7PE@33958,4IG5S@91061	NA|NA|NA	S	Protein of unknown function (DUF3397)
PAKBJLMI_00465	748671.LCRIS_00821	4e-72	277.3	Lactobacillaceae	mraZ	GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031333,GO:0043254,GO:0043565,GO:0044087,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2000142,GO:2000143,GO:2001141		ko:K03925					ko00000				Bacteria	1V3JD@1239,3F6K3@33958,4HH23@91061,COG2001@1,COG2001@2	NA|NA|NA	K	Belongs to the MraZ family
PAKBJLMI_00466	272621.LBA0803	2.2e-176	624.8	Lactobacillaceae	rsmH	GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360	2.1.1.199	ko:K03438					ko00000,ko01000,ko03009				Bacteria	1TNZV@1239,3F3MF@33958,4H9U2@91061,COG0275@1,COG0275@2	NA|NA|NA	J	Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
PAKBJLMI_00467	272621.LBA0804	2.4e-54	218.0	Lactobacillaceae	ftsL												Bacteria	1VCE5@1239,3F6KG@33958,4HM4W@91061,COG4839@1,COG4839@2	NA|NA|NA	D	Cell division protein FtsL
PAKBJLMI_00468	272621.LBA0805	0.0	1414.1	Lactobacillaceae	ftsI	GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0008144,GO:0008150,GO:0008658,GO:0008955,GO:0009987,GO:0016020,GO:0016021,GO:0016740,GO:0016757,GO:0016758,GO:0031224,GO:0031226,GO:0031406,GO:0032153,GO:0033218,GO:0033293,GO:0036094,GO:0042221,GO:0042493,GO:0043167,GO:0043168,GO:0043177,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051301,GO:0071944,GO:0097159,GO:1901363,GO:1901681	3.4.16.4	ko:K03587,ko:K08384,ko:K08724,ko:K12552,ko:K12556	ko00550,ko01100,ko01501,map00550,map01100,map01501				ko00000,ko00001,ko01000,ko01011,ko03036			iSSON_1240.SSON_0092	Bacteria	1TP93@1239,3F47N@33958,4H9VQ@91061,COG0768@1,COG0768@2	NA|NA|NA	M	Penicillin-binding Protein
PAKBJLMI_00469	272621.LBA0806	2.1e-177	628.2	Lactobacillaceae	mraY	GO:0000270,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008963,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016020,GO:0016740,GO:0016772,GO:0016780,GO:0030203,GO:0034645,GO:0040007,GO:0042546,GO:0042802,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0044464,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0071944,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576	2.7.8.13	ko:K01000	ko00550,ko01100,ko01502,map00550,map01100,map01502		R05629,R05630	RC00002,RC02753	ko00000,ko00001,ko01000,ko01011	9.B.146		iAF987.Gmet_0409,iEC042_1314.EC042_0088,iECABU_c1320.ECABU_c00920,iECED1_1282.ECED1_0088,iECH74115_1262.ECH74115_0095,iECSP_1301.ECSP_0090,iECs_1301.ECs0091,iG2583_1286.G2583_0091,iSDY_1059.SDY_0117,iZ_1308.Z0097,ic_1306.c0105	Bacteria	1TP8W@1239,3F3YP@33958,4H9TP@91061,COG0472@1,COG0472@2	NA|NA|NA	M	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
PAKBJLMI_00470	272621.LBA0808	1.5e-261	908.3	Lactobacillaceae	murD		6.3.2.9	ko:K01925	ko00471,ko00550,ko01100,map00471,map00550,map01100		R02783	RC00064,RC00141	ko00000,ko00001,ko01000,ko01011				Bacteria	1TQ3P@1239,3F49W@33958,4HA5P@91061,COG0771@1,COG0771@2	NA|NA|NA	M	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
PAKBJLMI_00471	272621.LBA0809	4e-209	733.8	Lactobacillaceae	murG	GO:0000270,GO:0003674,GO:0003824,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008194,GO:0008375,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016740,GO:0016757,GO:0016758,GO:0030203,GO:0034645,GO:0040007,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0050511,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576	2.4.1.227,6.3.2.8	ko:K01924,ko:K02563	ko00471,ko00550,ko01100,ko01502,ko04112,map00471,map00550,map01100,map01502,map04112		R03193,R05032,R05662	RC00005,RC00049,RC00064,RC00141	ko00000,ko00001,ko01000,ko01011		GT28	iLJ478.TM0232,iSFV_1184.SFV_0083,iSF_1195.SF0087,iSFxv_1172.SFxv_0091,iS_1188.S0089	Bacteria	1TQFT@1239,3F4FW@33958,4HBAQ@91061,COG0707@1,COG0707@2	NA|NA|NA	M	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
PAKBJLMI_00472	272621.LBA0810	1.2e-131	476.1	Lactobacillaceae	divIB			ko:K03589	ko04112,map04112				ko00000,ko00001,ko03036				Bacteria	1V6V5@1239,3F406@33958,4HDFD@91061,COG1589@1,COG1589@2	NA|NA|NA	D	Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
PAKBJLMI_00473	272621.LBA0811	2.5e-245	854.4	Lactobacillaceae	ftsA	GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0009898,GO:0009987,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032153,GO:0044425,GO:0044459,GO:0044464,GO:0051301,GO:0071944,GO:0098552,GO:0098562		ko:K03590	ko04112,map04112				ko00000,ko00001,ko03036,ko04812				Bacteria	1TP1Z@1239,3F413@33958,4H9NF@91061,COG0849@1,COG0849@2	NA|NA|NA	D	Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
PAKBJLMI_00474	272621.LBA0812	4.2e-245	853.6	Lactobacillaceae	ftsZ	GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005515,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0030428,GO:0032153,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035639,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0044424,GO:0044464,GO:0051301,GO:0097159,GO:0097367,GO:1901265,GO:1901363		ko:K03531	ko04112,map04112				ko00000,ko00001,ko02048,ko03036,ko04812				Bacteria	1TP6W@1239,3F4V1@33958,4H9WZ@91061,COG0206@1,COG0206@2	NA|NA|NA	D	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
PAKBJLMI_00475	272621.LBA0814	2.1e-73	281.6	Lactobacillaceae	sepF	GO:0000910,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0007049,GO:0008150,GO:0009987,GO:0016020,GO:0016043,GO:0022402,GO:0022607,GO:0032506,GO:0042802,GO:0044085,GO:0044464,GO:0051301,GO:0071840,GO:0071944,GO:0090529		ko:K09772					ko00000,ko03036				Bacteria	1VER3@1239,3F7MQ@33958,4HKIC@91061,COG1799@1,COG1799@2	NA|NA|NA	D	Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
PAKBJLMI_00476	891391.LAC30SC_04060	7.8e-29	132.9	Lactobacillaceae	yggT	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944		ko:K02221					ko00000,ko02044				Bacteria	1U6JG@1239,3F818@33958,4IGBY@91061,COG0762@1,COG0762@2	NA|NA|NA	S	YGGT family
PAKBJLMI_00477	272621.LBA0815	6.7e-150	536.6	Lactobacillaceae	ylmH			ko:K02487,ko:K06596	ko02020,ko02025,map02020,map02025	M00507			ko00000,ko00001,ko00002,ko01001,ko02022,ko02035				Bacteria	1U5V2@1239,3F48W@33958,4HD3F@91061,COG2302@1,COG2302@2	NA|NA|NA	S	S4 domain protein
PAKBJLMI_00478	272621.LBA0816	1.9e-75	289.3	Lactobacillaceae	gpsB			ko:K04074					ko00000,ko03036				Bacteria	1V27M@1239,3F4IN@33958,4HG80@91061,COG3599@1,COG3599@2	NA|NA|NA	D	DivIVA domain protein
PAKBJLMI_00479	272621.LBA0817	0.0	1909.8	Lactobacillaceae	ileS	GO:0003674,GO:0003824,GO:0004812,GO:0004822,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006428,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576	6.1.1.5	ko:K01870	ko00970,map00970	M00359,M00360	R03656	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016			iG2583_1286.G2583_0027,iPC815.YPO0475	Bacteria	1TPS7@1239,3F3X4@33958,4HAWB@91061,COG0060@1,COG0060@2	NA|NA|NA	J	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
PAKBJLMI_00480	272621.LBA0818	2.1e-31	141.0	Lactobacillaceae	cspA			ko:K03704					ko00000,ko03000				Bacteria	1U6DB@1239,3F7NC@33958,4IG52@91061,COG1278@1,COG1278@2	NA|NA|NA	K	'Cold-shock' DNA-binding domain
PAKBJLMI_00481	272621.LBA0819	8.9e-104	382.9	Lactobacillaceae	nudF		3.6.1.13	ko:K01515	ko00230,map00230		R01054	RC00002	ko00000,ko00001,ko01000			iHN637.CLJU_RS05505,iSB619.SA_RS07540,iYO844.BSU23610	Bacteria	1V6F5@1239,3F53J@33958,4HII9@91061,COG0494@1,COG0494@2	NA|NA|NA	L	ADP-ribose pyrophosphatase
PAKBJLMI_00482	1423767.BALU01000002_gene1715	3.4e-28	131.0	Lactobacillaceae													Bacteria	1U6T4@1239,2B5KT@1,31YFV@2,3F8FY@33958,4IGKV@91061	NA|NA|NA		
PAKBJLMI_00483	272621.LBA0820	5.9e-126	456.8	Lactobacillaceae	mtnN		3.2.2.9	ko:K01243	ko00270,ko01100,ko01230,map00270,map01100,map01230	M00034,M00609	R00194,R01401	RC00063,RC00318	ko00000,ko00001,ko00002,ko01000				Bacteria	1U7WK@1239,3F4HE@33958,4HB8K@91061,COG0775@1,COG0775@2	NA|NA|NA	E	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
PAKBJLMI_00484	272621.LBA0821	9.8e-58	229.2	Lactobacillaceae	XK27_04120												Bacteria	1VDSF@1239,2DHWG@1,32U9W@2,3F7E3@33958,4HP9N@91061	NA|NA|NA	S	Putative amino acid metabolism
PAKBJLMI_00485	272621.LBA0822	9.3e-222	775.8	Lactobacillaceae	mnmA	GO:0001510,GO:0002097,GO:0002098,GO:0002143,GO:0003674,GO:0003824,GO:0004808,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016782,GO:0016783,GO:0030488,GO:0032259,GO:0034227,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360	2.8.1.13	ko:K00566	ko04122,map04122		R08700	RC02313,RC02315	ko00000,ko00001,ko01000,ko03016				Bacteria	1TPIZ@1239,3F4N5@33958,4HBJ6@91061,COG0482@1,COG0482@2	NA|NA|NA	J	Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
PAKBJLMI_00486	272621.LBA0823	4.3e-126	457.2	Lactobacillaceae	pgm6		5.4.2.11,5.4.2.12	ko:K01834,ko:K15634	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	M00001,M00002,M00003	R01518	RC00536	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147				Bacteria	1V7EZ@1239,3FBD9@33958,4HJCK@91061,COG0406@1,COG0406@2	NA|NA|NA	G	Phosphoglycerate mutase family
PAKBJLMI_00487	272621.LBA0824	2e-103	381.7	Lactobacillaceae													Bacteria	1VFGR@1239,3F4MD@33958,4IBSH@91061,COG0457@1,COG0457@2	NA|NA|NA	S	Repeat protein
PAKBJLMI_00488	272621.LBA0825	0.0	1509.6	Lactobacillaceae	recD2		3.1.11.5	ko:K03581	ko03440,map03440				ko00000,ko00001,ko01000,ko03400				Bacteria	1TPZH@1239,3F44X@33958,4HATQ@91061,COG0507@1,COG0507@2	NA|NA|NA	L	DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
PAKBJLMI_00489	272621.LBA0826	5e-290	1003.0	Lactobacillaceae													Bacteria	1U5J6@1239,3F62N@33958,4IFA3@91061,COG5527@1,COG5527@2	NA|NA|NA	L	Nuclease-related domain
PAKBJLMI_00490	272621.LBA0827	9.3e-183	646.0	Lactobacillaceae	ytlR		2.7.1.91	ko:K04718	ko00600,ko01100,ko04020,ko04071,ko04072,ko04370,ko04371,ko04666,ko05152,map00600,map01100,map04020,map04071,map04072,map04370,map04371,map04666,map05152	M00100	R01926,R02976	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000				Bacteria	1V7DZ@1239,3F5GQ@33958,4HBUD@91061,COG1597@1,COG1597@2	NA|NA|NA	I	Diacylglycerol kinase catalytic domain
PAKBJLMI_00491	272621.LBA0828	0.0	1108.6	Lactobacillaceae	rnjA	GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004527,GO:0004532,GO:0004534,GO:0004540,GO:0005488,GO:0005515,GO:0006139,GO:0006364,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008409,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016072,GO:0016787,GO:0016788,GO:0016796,GO:0016896,GO:0022613,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0042802,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0090503,GO:0140098,GO:1901360		ko:K12574	ko03018,map03018				ko00000,ko00001,ko01000,ko03019				Bacteria	1TQ9G@1239,3F3TT@33958,4HAAP@91061,COG0595@1,COG0595@2	NA|NA|NA	J	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PAKBJLMI_00492	272621.LBA0829	3.2e-33	147.1	Lactobacillaceae	ykzG												Bacteria	1VEI7@1239,3F807@33958,4HNSK@91061,COG5503@1,COG5503@2	NA|NA|NA	S	Belongs to the UPF0356 family
PAKBJLMI_00493	272621.LBA0830	1.1e-101	375.9	Lactobacillaceae	def	GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0018193,GO:0018206,GO:0019538,GO:0031365,GO:0036211,GO:0042586,GO:0043170,GO:0043412,GO:0043686,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:1901564	3.5.1.31,3.5.1.88	ko:K01450,ko:K01462	ko00270,ko00630,map00270,map00630		R00653	RC00165,RC00323	ko00000,ko00001,ko01000				Bacteria	1V70B@1239,3F3YH@33958,4HH0G@91061,COG0242@1,COG0242@2	NA|NA|NA	J	Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
PAKBJLMI_00494	272621.LBA0831	0.0	1213.4	Lactobacillaceae	typA	GO:0000027,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006996,GO:0008150,GO:0009266,GO:0009408,GO:0009409,GO:0009628,GO:0009987,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043933,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0065003,GO:0070925,GO:0071826,GO:0071840		ko:K06207					ko00000				Bacteria	1TQ5Y@1239,3F3UK@33958,4HAQ6@91061,COG1217@1,COG1217@2	NA|NA|NA	T	GTP-binding protein TypA
PAKBJLMI_00495	272621.LBA0833	7.7e-211	739.6	Lactobacillaceae	ftsW			ko:K03588	ko04112,map04112				ko00000,ko00001,ko02000,ko03036	2.A.103.1			Bacteria	1TPT7@1239,3F4IK@33958,4HAEV@91061,COG0772@1,COG0772@2	NA|NA|NA	D	Belongs to the SEDS family
PAKBJLMI_00496	272621.LBA0834	4.3e-53	213.8	Lactobacillaceae	ylbG												Bacteria	1VF52@1239,3F70V@33958,4HNTH@91061,COG4471@1,COG4471@2	NA|NA|NA	S	Uncharacterized protein conserved in bacteria (DUF2129)
PAKBJLMI_00497	272621.LBA0835	4.6e-97	360.5	Lactobacillaceae	rsmD		2.1.1.171	ko:K08316			R07234	RC00003	ko00000,ko01000,ko03009				Bacteria	1V3JF@1239,3F505@33958,4HGXT@91061,COG0742@1,COG0742@2	NA|NA|NA	L	RNA methyltransferase, RsmD family
PAKBJLMI_00498	272621.LBA0836	6.2e-82	310.1	Lactobacillaceae	coaD	GO:0003674,GO:0003824,GO:0004595,GO:0005488,GO:0005515,GO:0006082,GO:0006139,GO:0006163,GO:0006164,GO:0006575,GO:0006725,GO:0006732,GO:0006753,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009110,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0015939,GO:0015940,GO:0016043,GO:0016053,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019752,GO:0022607,GO:0032787,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034214,GO:0034641,GO:0034654,GO:0042364,GO:0042398,GO:0042802,GO:0043436,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046390,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0051259,GO:0055086,GO:0065003,GO:0070566,GO:0071704,GO:0071840,GO:0072330,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	2.7.7.3	ko:K00954	ko00770,ko01100,map00770,map01100	M00120	R03035	RC00002	ko00000,ko00001,ko00002,ko01000			iPC815.YPO0053,iSDY_1059.SDY_4064	Bacteria	1V3MR@1239,3FCD3@33958,4HH47@91061,COG0669@1,COG0669@2	NA|NA|NA	H	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
PAKBJLMI_00499	272621.LBA0837	7.6e-194	682.9	Lactobacillaceae	ylbL			ko:K07177	ko02024,map02024				ko00000,ko00001,ko01002				Bacteria	1TRUF@1239,3F4KY@33958,4HBAY@91061,COG3480@1,COG3480@2	NA|NA|NA	T	Belongs to the peptidase S16 family
PAKBJLMI_00500	272621.LBA0838	1.7e-72	279.3	Lactobacillaceae	comEA			ko:K02237		M00429			ko00000,ko00002,ko02044	3.A.11.1,3.A.11.2			Bacteria	1VA3W@1239,3F7NP@33958,4HKJ1@91061,COG1555@1,COG1555@2	NA|NA|NA	L	Competence protein ComEA
PAKBJLMI_00501	272621.LBA0839	0.0	1496.5	Lactobacillaceae	comEC			ko:K02238		M00429			ko00000,ko00002,ko02044	3.A.11.1,3.A.11.2			Bacteria	1TS9U@1239,3F3VT@33958,4H9M4@91061,COG0658@1,COG0658@2,COG2333@1,COG2333@2	NA|NA|NA	S	Competence protein ComEC
PAKBJLMI_00502	272621.LBA0840	8.8e-176	622.9	Lactobacillaceae	holA		2.7.7.7	ko:K02340	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400				Bacteria	1TRM0@1239,3F3TP@33958,4HBB4@91061,COG1466@1,COG1466@2	NA|NA|NA	L	DNA polymerase III delta subunit
PAKBJLMI_00503	272621.LBA0841	3e-35	154.1	Lactobacillaceae	rpsT	GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0004857,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008073,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030234,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0042979,GO:0043043,GO:0043086,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050790,GO:0065003,GO:0065007,GO:0065009,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:0098772,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904		ko:K02968	ko03010,map03010	M00178			br01610,ko00000,ko00001,ko00002,ko03011				Bacteria	1VEGX@1239,3F7D8@33958,4HNJS@91061,COG0268@1,COG0268@2	NA|NA|NA	J	Binds directly to 16S ribosomal RNA
PAKBJLMI_00504	1423748.BALB01000001_gene8	1.1e-40	172.2	Lactobacillaceae	rpsO	GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006139,GO:0006378,GO:0006396,GO:0006397,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0016043,GO:0016070,GO:0016071,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0031123,GO:0031124,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043631,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904		ko:K02956	ko03010,map03010	M00178,M00179			br01610,ko00000,ko00001,ko00002,ko03011				Bacteria	1VA5C@1239,3F7DV@33958,4HKE9@91061,COG0184@1,COG0184@2	NA|NA|NA	J	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
PAKBJLMI_00505	272621.LBA0843	0.0	1136.7	Lactobacillaceae	rnjB	GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0006139,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016787,GO:0016788,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360		ko:K12574	ko03018,map03018				ko00000,ko00001,ko01000,ko03019				Bacteria	1TQ9G@1239,3F3U9@33958,4HAAP@91061,COG0595@1,COG0595@2	NA|NA|NA	J	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PAKBJLMI_00506	272621.LBA0844	2.2e-151	541.6	Lactobacillaceae													Bacteria	1TW9B@1239,2CC00@1,30489@2,3F52A@33958,4I50I@91061	NA|NA|NA		
PAKBJLMI_00507	272621.LBA0845	2.5e-225	787.7	Lactobacillaceae	tuf	GO:0001817,GO:0001819,GO:0002791,GO:0002793,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0008150,GO:0009274,GO:0009275,GO:0009986,GO:0010339,GO:0016020,GO:0022610,GO:0030312,GO:0032677,GO:0032757,GO:0032879,GO:0032880,GO:0035821,GO:0044003,GO:0044068,GO:0044403,GO:0044406,GO:0044419,GO:0044424,GO:0044426,GO:0044462,GO:0044464,GO:0044650,GO:0044651,GO:0048518,GO:0048522,GO:0050707,GO:0050708,GO:0050714,GO:0050715,GO:0050789,GO:0050794,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051222,GO:0051223,GO:0051239,GO:0051240,GO:0051701,GO:0051704,GO:0051817,GO:0065007,GO:0070201,GO:0071944,GO:0090087,GO:1903530,GO:1903532,GO:1904951,GO:2000482,GO:2000484		ko:K02358,ko:K15771	ko02010,map02010	M00491			ko00000,ko00001,ko00002,ko02000,ko03012,ko03029,ko04147	3.A.1.1.16,3.A.1.1.2			Bacteria	1TPKC@1239,3F3ZP@33958,4HAEH@91061,COG0050@1,COG0050@2	NA|NA|NA	J	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
PAKBJLMI_00508	272621.LBA0846	3e-227	794.3	Lactobacillaceae	tig	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464		ko:K03545					ko00000				Bacteria	1TQQ8@1239,3F40B@33958,4H9Q8@91061,COG0544@1,COG0544@2	NA|NA|NA	D	Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
PAKBJLMI_00509	272621.LBA0847	1.2e-233	815.5	Lactobacillaceae	clpX	GO:0000166,GO:0000502,GO:0002020,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009376,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0019899,GO:0019904,GO:0030163,GO:0030164,GO:0030312,GO:0030554,GO:0031333,GO:0031597,GO:0032271,GO:0032272,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0035639,GO:0036094,GO:0040007,GO:0042623,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0043254,GO:0043335,GO:0044087,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051301,GO:0051704,GO:0065007,GO:0070011,GO:0071704,GO:0071944,GO:0097159,GO:0097367,GO:0097718,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1904949,GO:1905368,GO:1905369		ko:K03544	ko04112,map04112				ko00000,ko00001,ko03110				Bacteria	1TQ00@1239,3F41K@33958,4H9U4@91061,COG1219@1,COG1219@2	NA|NA|NA	O	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
PAKBJLMI_00510	272621.LBA0848	2e-106	391.7	Lactobacillaceae	engB	GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0017076,GO:0019001,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0097159,GO:0097367,GO:1901265,GO:1901363		ko:K03978					ko00000,ko03036				Bacteria	1TSPW@1239,3F44G@33958,4HBXZ@91061,COG0218@1,COG0218@2	NA|NA|NA	D	Necessary for normal cell division and for the maintenance of normal septation
PAKBJLMI_00511	272621.LBA0849	8.9e-192	676.0	Lactobacillaceae	dapF	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008837,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016853,GO:0016854,GO:0016855,GO:0019752,GO:0036361,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0047661,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	5.1.1.7	ko:K01778	ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230	M00016,M00525,M00527	R02735	RC00302	ko00000,ko00001,ko00002,ko01000				Bacteria	1TPMN@1239,3F4F7@33958,4HBH4@91061,COG0253@1,COG0253@2	NA|NA|NA	E	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
PAKBJLMI_00512	272621.LBA0850	2.5e-258	897.5	Lactobacillaceae	lysC	GO:0000166,GO:0003674,GO:0003824,GO:0004072,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006553,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0017076,GO:0019202,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046451,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	2.7.2.4	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	M00016,M00017,M00018,M00033,M00525,M00526,M00527	R00480	RC00002,RC00043	ko00000,ko00001,ko00002,ko01000			iYO844.BSU03790	Bacteria	1TPQJ@1239,3F48V@33958,4HAEP@91061,COG0527@1,COG0527@2	NA|NA|NA	E	Belongs to the aspartokinase family
PAKBJLMI_00513	272621.LBA0851	2.9e-251	874.0	Lactobacillaceae	lysA		4.1.1.19,4.1.1.20	ko:K01585,ko:K01586	ko00300,ko00330,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map00330,map01100,map01110,map01120,map01130,map01230	M00016,M00133,M00525,M00526,M00527	R00451,R00566	RC00299	ko00000,ko00001,ko00002,ko01000			iHN637.CLJU_RS18870	Bacteria	1TPE9@1239,3F3VJ@33958,4H9XW@91061,COG0019@1,COG0019@2	NA|NA|NA	E	Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
PAKBJLMI_00514	272621.LBA0852	5.7e-76	290.8	Lactobacillaceae	dapD	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008666,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009987,GO:0016053,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0016748,GO:0016749,GO:0019752,GO:0019877,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	2.3.1.117,2.3.1.89	ko:K00674,ko:K05822	ko00300,ko01100,ko01110,ko01120,ko01230,map00300,map01100,map01110,map01120,map01230	M00016,M00525	R04364,R04365	RC00004,RC01136	ko00000,ko00001,ko00002,ko01000			iSbBS512_1146.SbBS512_E0158,iYO844.BSU14180	Bacteria	1TQUJ@1239,3F3U0@33958,4H9KY@91061,COG2171@1,COG2171@2	NA|NA|NA	E	Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
PAKBJLMI_00515	272621.LBA0853	2.8e-221	774.2	Lactobacillaceae	hipO	GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016787,GO:0016810,GO:0016811,GO:0019213,GO:0019752,GO:0019877,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046451,GO:0050118,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	3.5.1.47	ko:K05823,ko:K21613	ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230	M00525	R02733	RC00064,RC00300	ko00000,ko00001,ko00002,ko01000,ko01002				Bacteria	1TPD7@1239,3F419@33958,4H9SG@91061,COG1473@1,COG1473@2	NA|NA|NA	E	Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
PAKBJLMI_00516	272621.LBA0854	3.7e-176	624.0	Lactobacillaceae	dapA		4.3.3.7	ko:K01714	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	M00016,M00525,M00526,M00527	R10147	RC03062,RC03063	ko00000,ko00001,ko00002,ko01000				Bacteria	1TPCK@1239,3F4UH@33958,4H9K9@91061,COG0329@1,COG0329@2	NA|NA|NA	E	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PAKBJLMI_00517	272621.LBA0855	3.9e-142	510.8	Lactobacillaceae	dapB	GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008839,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016020,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0019752,GO:0019877,GO:0030312,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0048037,GO:0050661,GO:0050662,GO:0051287,GO:0055114,GO:0070402,GO:0070404,GO:0071704,GO:0071944,GO:0097159,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	1.17.1.8	ko:K00215	ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230	M00016,M00525,M00526,M00527	R04198,R04199	RC00478	ko00000,ko00001,ko00002,ko01000			iJN678.dapB,iNJ661.Rv2773c,iYO844.BSU22490	Bacteria	1TR9D@1239,3F3MA@33958,4HA5X@91061,COG0289@1,COG0289@2	NA|NA|NA	E	Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
PAKBJLMI_00518	272621.LBA0856	5.3e-220	770.0	Lactobacillaceae	aspC		2.6.1.1	ko:K00812,ko:K00841,ko:K10907	ko00220,ko00250,ko00270,ko00300,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00300,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230	M00525	R00355,R00694,R00734,R00896,R02433,R02619,R04467,R05052	RC00006	ko00000,ko00001,ko00002,ko01000,ko01007				Bacteria	1TP0J@1239,3F3MX@33958,4HA13@91061,COG0436@1,COG0436@2	NA|NA|NA	E	Aminotransferase
PAKBJLMI_00519	272621.LBA0857	2.3e-198	698.0	Lactobacillaceae	asd		1.2.1.11	ko:K00133	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	M00016,M00017,M00018,M00033,M00525,M00526,M00527	R02291	RC00684	ko00000,ko00001,ko00002,ko01000				Bacteria	1TPC6@1239,3F4S9@33958,4HA9H@91061,COG0136@1,COG0136@2	NA|NA|NA	E	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
PAKBJLMI_00520	272621.LBA0858	9.2e-206	722.6	Lactobacillaceae	pbpX1												Bacteria	1V4BS@1239,3F3QN@33958,4HJRT@91061,COG1680@1,COG1680@2	NA|NA|NA	V	Beta-lactamase
PAKBJLMI_00521	272621.LBA0860	1.7e-46	191.8	Lactobacillaceae													Bacteria	1UHVZ@1239,3F5G1@33958,4ISGG@91061,COG2267@1,COG2267@2	NA|NA|NA	I	Protein of unknown function (DUF2974)
PAKBJLMI_00522	272621.LBA0860	6.5e-243	846.3	Lactobacillaceae													Bacteria	1UHVZ@1239,3F5G1@33958,4ISGG@91061,COG2267@1,COG2267@2	NA|NA|NA	I	Protein of unknown function (DUF2974)
PAKBJLMI_00523	272621.LBA0861	8.6e-41	172.6	Lactobacillaceae													Bacteria	1TR5A@1239,3F7II@33958,4IT3F@91061,COG3976@1,COG3976@2	NA|NA|NA	C	FMN_bind
PAKBJLMI_00524	272621.LBA0863	1.6e-80	305.4	Lactobacillaceae													Bacteria	1UFVR@1239,2F7PX@1,34049@2,3F548@33958,4IEZD@91061	NA|NA|NA		
PAKBJLMI_00525	272621.LBA0864	4.1e-286	989.9	Lactobacillaceae													Bacteria	1W1FZ@1239,2FIUN@1,34AK2@2,3F4QI@33958,4HYXZ@91061	NA|NA|NA		
PAKBJLMI_00526	272621.LBA0865	5.2e-178	630.2	Lactobacillaceae	iunH		3.2.2.1	ko:K01239	ko00230,ko00760,ko01100,map00230,map00760,map01100		R01245,R01273,R01677,R01770,R02143	RC00033,RC00063,RC00122,RC00318,RC00485	ko00000,ko00001,ko01000				Bacteria	1TRGU@1239,3F3V1@33958,4H9TZ@91061,COG1957@1,COG1957@2	NA|NA|NA	F	inosine-uridine preferring nucleoside hydrolase
PAKBJLMI_00527	272621.LBA0866	2.7e-16	90.1	Bacteria	adhC		1.1.1.90	ko:K00055,ko:K06898	ko00350,ko00360,ko00622,ko00623,ko01100,ko01120,ko01220,map00350,map00360,map00622,map00623,map01100,map01120,map01220	M00537,M00538	R01763,R02611,R04304,R05282,R05347,R05348	RC00087,RC00116	ko00000,ko00001,ko00002,ko01000				Bacteria	COG1062@1,COG1062@2	NA|NA|NA	C	S-(hydroxymethyl)glutathione dehydrogenase activity
PAKBJLMI_00528	272621.LBA0867	8.5e-145	519.6	Lactobacillaceae													Bacteria	1U7UW@1239,29QC2@1,30BBB@2,3FA7G@33958,4IHSB@91061	NA|NA|NA		
PAKBJLMI_00529	1136177.KCA1_2695	2.7e-10	72.0	Lactobacillaceae													Bacteria	1U6TR@1239,29PQT@1,30AKJ@2,3F8H1@33958,4IGMJ@91061	NA|NA|NA		
PAKBJLMI_00532	525365.HMPREF0548_0922	6.1e-19	99.4	Lactobacillaceae	alkD												Bacteria	1V4WB@1239,3F4B1@33958,4HFXG@91061,COG4912@1,COG4912@2	NA|NA|NA	L	DNA alkylation repair enzyme
PAKBJLMI_00533	272621.LBA0871	1.5e-67	262.3	Lactobacillaceae	alkD												Bacteria	1V4WB@1239,3F4B1@33958,4HFXG@91061,COG4912@1,COG4912@2	NA|NA|NA	L	DNA alkylation repair enzyme
PAKBJLMI_00534	272621.LBA0872	6e-39	166.4	Lactobacillaceae													Bacteria	1VENK@1239,3F7EK@33958,4HNKV@91061,COG2261@1,COG2261@2	NA|NA|NA	S	Transglycosylase associated protein
PAKBJLMI_00536	272621.LBA0874	2.4e-294	1017.3	Lactobacillaceae	celA		3.2.1.86	ko:K01223	ko00010,ko00500,map00010,map00500		R00839,R05133,R05134	RC00049,RC00171,RC00714	ko00000,ko00001,ko01000		GT1		Bacteria	1TP19@1239,3F3PQ@33958,4HA1W@91061,COG2723@1,COG2723@2	NA|NA|NA	G	Belongs to the glycosyl hydrolase 1 family
PAKBJLMI_00537	272621.LBA0875	2.2e-128	464.9	Lactobacillaceae				ko:K03486,ko:K03492,ko:K03710					ko00000,ko03000				Bacteria	1V0UW@1239,3F4BH@33958,4HI7E@91061,COG2188@1,COG2188@2	NA|NA|NA	K	UTRA domain
PAKBJLMI_00538	272621.LBA0876	4.5e-55	220.3	Lactobacillaceae	celA1		2.7.1.196,2.7.1.205	ko:K02760	ko00500,ko02060,map00500,map02060	M00275	R11170,R11172	RC00017,RC03206	ko00000,ko00001,ko00002,ko01000,ko02000	4.A.3.2			Bacteria	1VADE@1239,3F6GU@33958,4HKG9@91061,COG1440@1,COG1440@2	NA|NA|NA	G	PTS system, Lactose/Cellobiose specific IIB subunit
PAKBJLMI_00539	272621.LBA0877	6.7e-60	236.5	Lactobacillaceae	chbA	GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006810,GO:0008150,GO:0008643,GO:0009401,GO:0009987,GO:0015144,GO:0016043,GO:0016740,GO:0016772,GO:0016773,GO:0022607,GO:0022804,GO:0022857,GO:0034219,GO:0043933,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0051179,GO:0051234,GO:0051259,GO:0051260,GO:0055085,GO:0065003,GO:0071702,GO:0071840,GO:0090563,GO:0090566,GO:1901264,GO:1902815	2.7.1.196,2.7.1.205	ko:K02759	ko00500,ko02060,map00500,map02060	M00275	R11170,R11172	RC00017,RC03206	ko00000,ko00001,ko00002,ko01000,ko02000	4.A.3.2		iECABU_c1320.ECABU_c17610,iECOK1_1307.ECOK1_1683,iECUMN_1333.ECUMN_2025,iNRG857_1313.NRG857_07575,iUMN146_1321.UM146_09345	Bacteria	1VEGE@1239,3F6Z5@33958,4HM37@91061,COG1447@1,COG1447@2	NA|NA|NA	G	PTS system, Lactose Cellobiose specific IIA subunit
PAKBJLMI_00540	272621.LBA0878	1.2e-80	305.8	Lactobacillaceae													Bacteria	1UHKX@1239,2E5MG@1,32WCE@2,3F64Q@33958,4IS3T@91061	NA|NA|NA		
PAKBJLMI_00541	272621.LBA0879	4.4e-138	497.3	Lactobacillaceae	celD			ko:K02761	ko00500,ko02060,map00500,map02060	M00275	R11170,R11172	RC00017,RC03206	ko00000,ko00001,ko00002,ko02000	4.A.3.2			Bacteria	1VRPJ@1239,3F4K4@33958,4HTNB@91061,COG1455@1,COG1455@2	NA|NA|NA	G	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PAKBJLMI_00542	272621.LBA0880	1.2e-70	272.3	Lactobacillaceae													Bacteria	1U5PW@1239,29NW2@1,309U6@2,3F6A7@33958,4IFE6@91061	NA|NA|NA	S	Domain of unknown function (DUF3284)
PAKBJLMI_00543	272621.LBA0881	6.3e-303	1045.8	Lactobacillaceae			3.2.1.86	ko:K01223	ko00010,ko00500,map00010,map00500		R00839,R05133,R05134	RC00049,RC00171,RC00714	ko00000,ko00001,ko01000		GT1		Bacteria	1TP19@1239,3F3PQ@33958,4HA1W@91061,COG2723@1,COG2723@2	NA|NA|NA	G	Belongs to the glycosyl hydrolase 1 family
PAKBJLMI_00544	272621.LBA0882	4.7e-134	483.8	Lactobacillaceae	gmuR			ko:K03486,ko:K03492,ko:K03710					ko00000,ko03000				Bacteria	1V0UW@1239,3FC8M@33958,4HD10@91061,COG2188@1,COG2188@2	NA|NA|NA	K	UTRA
PAKBJLMI_00545	272621.LBA0883	3.5e-41	173.7	Lactobacillaceae													Bacteria	1U6CW@1239,29FGE@1,302E1@2,3F7MK@33958,4IG4M@91061	NA|NA|NA		
PAKBJLMI_00546	272621.LBA0884	2.4e-267	927.5	Lactobacillaceae	lacE			ko:K02761	ko00500,ko02060,map00500,map02060	M00275	R11170,R11172	RC00017,RC03206	ko00000,ko00001,ko00002,ko02000	4.A.3.2			Bacteria	1VTVX@1239,3FC6X@33958,4HFKM@91061,COG1455@1,COG1455@2	NA|NA|NA	G	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PAKBJLMI_00547	272621.LBA0885	9.5e-285	985.3	Lactobacillaceae	bglH		3.2.1.86	ko:K01223	ko00010,ko00500,map00010,map00500		R00839,R05133,R05134	RC00049,RC00171,RC00714	ko00000,ko00001,ko01000		GT1		Bacteria	1TP19@1239,3FC7C@33958,4HDER@91061,COG2723@1,COG2723@2	NA|NA|NA	G	Belongs to the glycosyl hydrolase 1 family
PAKBJLMI_00548	272621.LBA0886	6.8e-156	556.6	Lactobacillaceae	ypbG		2.7.1.2	ko:K00845	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	M00001,M00549	R00299,R01600,R01786	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000				Bacteria	1UZ80@1239,3FBD4@33958,4HD5J@91061,COG1940@1,COG1940@2	NA|NA|NA	GK	ROK family
PAKBJLMI_00549	272621.LBA0887	1.6e-85	322.0	Lactobacillaceae													Bacteria	1UYXM@1239,3F8C2@33958,4HD96@91061,COG0778@1,COG0778@2	NA|NA|NA	C	Nitroreductase family
PAKBJLMI_00550	272621.LBA0888	1.3e-108	399.1	Lactobacillaceae													Bacteria	1VZSI@1239,29W71@1,30HS8@2,3F6RP@33958,4IFNQ@91061	NA|NA|NA	S	Domain of unknown function (DUF4767)
PAKBJLMI_00551	272621.LBA0889	8.1e-246	855.9	Lactobacillaceae	eno	GO:0001968,GO:0003674,GO:0005488,GO:0005515,GO:0043236,GO:0050840	4.2.1.11	ko:K01689	ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066	M00001,M00002,M00003,M00346,M00394	R00658	RC00349	ko00000,ko00001,ko00002,ko01000,ko03019,ko04147				Bacteria	1V12I@1239,3FCCA@33958,4HTD2@91061,COG0148@1,COG0148@2	NA|NA|NA	G	Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
PAKBJLMI_00552	272621.LBA0890	6.8e-153	546.6	Lactobacillaceae	yitS												Bacteria	1V0RC@1239,3F4PM@33958,4HBSA@91061,COG1307@1,COG1307@2	NA|NA|NA	S	Uncharacterised protein, DegV family COG1307
PAKBJLMI_00553	272621.LBA0891	1.7e-99	368.6	Lactobacillaceae			3.6.1.27	ko:K19302	ko00550,map00550		R05627	RC00002	ko00000,ko00001,ko01000,ko01011				Bacteria	1U506@1239,3F3M2@33958,4IES2@91061,COG0671@1,COG0671@2	NA|NA|NA	I	Acid phosphatase homologues
PAKBJLMI_00554	272621.LBA0892	3.3e-191	674.1	Lactobacillaceae	cbh		3.5.1.24	ko:K01442	ko00120,ko00121,ko01100,map00120,map00121,map01100		R02797,R03975,R03977,R04486,R04487,R05835	RC00090,RC00096	ko00000,ko00001,ko01000				Bacteria	1TPZS@1239,3F4NH@33958,4HC4Y@91061,COG3049@1,COG3049@2	NA|NA|NA	M	Linear amide C-N hydrolase, choloylglycine hydrolase family protein
PAKBJLMI_00556	272621.LBA0893	4.3e-180	637.1	Lactobacillaceae													Bacteria	1TPE1@1239,3F3NJ@33958,4HA65@91061,COG0582@1,COG0582@2	NA|NA|NA	L	Belongs to the 'phage' integrase family
PAKBJLMI_00557	272621.LBA0894	2.4e-11	74.3	Lactobacillaceae													Bacteria	1U7YS@1239,29QEB@1,30BDN@2,3FAC1@33958,4IHW6@91061	NA|NA|NA		
PAKBJLMI_00558	272621.LBA0895	5.8e-83	313.9	Lactobacillaceae													Bacteria	1U6W6@1239,2BE7U@1,327YU@2,3F8KV@33958,4IGQB@91061	NA|NA|NA		
PAKBJLMI_00560	272621.LBA0896	1.2e-55	222.2	Lactobacillaceae	ansR		3.4.21.88	ko:K01356,ko:K22299		M00729			ko00000,ko00002,ko01000,ko01002,ko03000,ko03400				Bacteria	1TVRN@1239,3F93H@33958,4I3Y7@91061,COG1396@1,COG1396@2	NA|NA|NA	K	Cro/C1-type HTH DNA-binding domain
PAKBJLMI_00561	272621.LBA0897	4.4e-29	133.3	Lactobacillaceae			2.3.1.19	ko:K00634,ko:K07729	ko00650,ko01100,map00650,map01100		R01174	RC00004,RC02816	ko00000,ko00001,ko01000,ko03000				Bacteria	1VKDV@1239,3F8QR@33958,4HRE4@91061,COG1476@1,COG1476@2	NA|NA|NA	K	Helix-turn-helix XRE-family like proteins
PAKBJLMI_00562	272621.LBA0899	8.1e-252	875.9	Lactobacillaceae	yifK	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944		ko:K03293					ko00000	2.A.3.1			Bacteria	1TP97@1239,3F3YD@33958,4H9QX@91061,COG1113@1,COG1113@2	NA|NA|NA	E	Amino acid permease
PAKBJLMI_00563	272621.LBA0901	6.1e-190	669.8	Lactobacillaceae	thyA	GO:0003674,GO:0003824,GO:0004799,GO:0006139,GO:0006220,GO:0006221,GO:0006231,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0009056,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009125,GO:0009129,GO:0009130,GO:0009131,GO:0009157,GO:0009159,GO:0009162,GO:0009165,GO:0009166,GO:0009176,GO:0009177,GO:0009178,GO:0009219,GO:0009221,GO:0009223,GO:0009262,GO:0009263,GO:0009264,GO:0009265,GO:0009394,GO:0009987,GO:0016740,GO:0016741,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0032259,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042083,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046073,GO:0046078,GO:0046079,GO:0046385,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0072529,GO:0090407,GO:1901135,GO:1901136,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576	2.1.1.45	ko:K00560	ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523	M00053	R02101	RC00219,RC00332	ko00000,ko00001,ko00002,ko01000				Bacteria	1TSIR@1239,3F3SB@33958,4H9QS@91061,COG0207@1,COG0207@2	NA|NA|NA	F	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
PAKBJLMI_00564	272621.LBA0902	5.6e-94	350.1	Lactobacillaceae	folA		1.5.1.3	ko:K00287	ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523	M00126,M00840	R00936,R00937,R00939,R00940,R02235,R02236,R11765	RC00109,RC00110,RC00158	ko00000,ko00001,ko00002,ko01000				Bacteria	1VB80@1239,3F6Y4@33958,4HIGJ@91061,COG0262@1,COG0262@2	NA|NA|NA	H	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
PAKBJLMI_00565	272621.LBA0903	1.9e-70	271.9	Lactobacillaceae	aha1			ko:K12952					ko00000,ko01000	3.A.3.23			Bacteria	1TPF5@1239,3F4Y1@33958,4H9ZI@91061,COG0474@1,COG0474@2	NA|NA|NA	P	E1-E2 ATPase
PAKBJLMI_00566	272621.LBA0903	0.0	1142.9	Lactobacillaceae	aha1			ko:K12952					ko00000,ko01000	3.A.3.23			Bacteria	1TPF5@1239,3F4Y1@33958,4H9ZI@91061,COG0474@1,COG0474@2	NA|NA|NA	P	E1-E2 ATPase
PAKBJLMI_00567	272621.LBA0904	5e-159	567.0	Lactobacillaceae	metQ1			ko:K02073	ko02010,map02010	M00238			ko00000,ko00001,ko00002,ko02000	3.A.1.24			Bacteria	1TQAS@1239,3F3WP@33958,4HCTA@91061,COG1464@1,COG1464@2	NA|NA|NA	P	Belongs to the nlpA lipoprotein family
PAKBJLMI_00568	272621.LBA0905	4.9e-157	560.5	Lactobacillaceae	metN			ko:K02071	ko02010,map02010	M00238			ko00000,ko00001,ko00002,ko02000	3.A.1.24			Bacteria	1TPPN@1239,3F3U5@33958,4H9VX@91061,COG1135@1,COG1135@2	NA|NA|NA	P	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PAKBJLMI_00569	272621.LBA0906	7.6e-81	307.0	Lactobacillaceae	metI			ko:K02072	ko02010,map02010	M00238			ko00000,ko00001,ko00002,ko02000	3.A.1.24			Bacteria	1TRSY@1239,3F48A@33958,4HBEV@91061,COG2011@1,COG2011@2	NA|NA|NA	P	ABC transporter permease
PAKBJLMI_00570	272621.LBA0907	2e-266	924.5	Lactobacillaceae	fumC	GO:0003674,GO:0003824,GO:0004333,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006106,GO:0006108,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016829,GO:0016835,GO:0016836,GO:0016999,GO:0017144,GO:0019752,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0055114,GO:0071704,GO:0072350	4.2.1.2	ko:K01679	ko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko04934,ko05200,ko05211,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200,map04934,map05200,map05211	M00009,M00011,M00173,M00376	R01082	RC00443	ko00000,ko00001,ko00002,ko01000				Bacteria	1UHPH@1239,3F3K0@33958,4HA6P@91061,COG0114@1,COG0114@2	NA|NA|NA	C	Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
PAKBJLMI_00571	272621.LBA0908	2e-266	924.5	Lactobacillaceae	frdC		1.3.5.4	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	M00009,M00011,M00150,M00173	R02164	RC00045	ko00000,ko00001,ko00002,ko01000				Bacteria	1TPAR@1239,3F3KJ@33958,4HAXN@91061,COG1053@1,COG1053@2	NA|NA|NA	C	FAD binding domain
PAKBJLMI_00572	272621.LBA0909	3.7e-232	810.4	Lactobacillaceae				ko:K02519					ko00000,ko03012,ko03029				Bacteria	1UJ2C@1239,3FBTV@33958,4ISZG@91061,COG4932@1,COG4932@2	NA|NA|NA	M	domain protein
PAKBJLMI_00573	272621.LBA0909	2.6e-49	201.1	Lactobacillaceae				ko:K02519					ko00000,ko03012,ko03029				Bacteria	1UJ2C@1239,3FBTV@33958,4ISZG@91061,COG4932@1,COG4932@2	NA|NA|NA	M	domain protein
PAKBJLMI_00574	272621.LBA0910	2.6e-169	601.3	Lactobacillaceae	ldh		1.1.1.27	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922		R00703,R01000,R03104	RC00031,RC00044	ko00000,ko00001,ko01000,ko04147				Bacteria	1TPSY@1239,3F3RM@33958,4HB0Z@91061,COG0039@1,COG0039@2	NA|NA|NA	C	Belongs to the LDH MDH superfamily. LDH family
PAKBJLMI_00575	272621.LBA0911	1.2e-257	895.2	Lactobacillaceae	pepC	GO:0000096,GO:0000098,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006508,GO:0006520,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008234,GO:0009056,GO:0009063,GO:0009636,GO:0009987,GO:0016054,GO:0016787,GO:0019538,GO:0019752,GO:0042221,GO:0043170,GO:0043418,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044273,GO:0044281,GO:0044282,GO:0044424,GO:0044464,GO:0046395,GO:0050667,GO:0050896,GO:0070011,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606	3.4.22.40	ko:K01372					ko00000,ko01000,ko01002				Bacteria	1TRJN@1239,3F5DQ@33958,4HBZ9@91061,COG3579@1,COG3579@2	NA|NA|NA	E	Peptidase C1-like family
PAKBJLMI_00576	272621.LBA0912	1.2e-274	951.8	Lactobacillaceae				ko:K03319					ko00000	2.A.47			Bacteria	1TSGE@1239,3F4RH@33958,4HDE4@91061,COG0471@1,COG0471@2	NA|NA|NA	P	Sodium:sulfate symporter transmembrane region
PAKBJLMI_00577	272621.LBA0913	1.1e-155	555.8	Lactobacillaceae	ydjP												Bacteria	1TR25@1239,3F4FI@33958,4HMJ7@91061,COG2267@1,COG2267@2	NA|NA|NA	I	Alpha/beta hydrolase family
PAKBJLMI_00578	272621.LBA0914	8.2e-196	689.5	Lactobacillaceae	citC		6.2.1.22	ko:K01910	ko02020,map02020		R04449	RC00012,RC00039	ko00000,ko00001,ko01000				Bacteria	1TSGQ@1239,3F4H7@33958,4HC6Q@91061,COG3053@1,COG3053@2	NA|NA|NA	H	Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
PAKBJLMI_00579	272621.LBA0915	4.1e-44	183.7	Lactobacillaceae	citD	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006091,GO:0006113,GO:0008150,GO:0008152,GO:0008815,GO:0009346,GO:0009987,GO:0015980,GO:0016829,GO:0016830,GO:0016833,GO:0032991,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0055114		ko:K01646	ko02020,map02020		R00362	RC00067,RC01118	ko00000,ko00001				Bacteria	1VEZZ@1239,3F7FR@33958,4HNXD@91061,COG3052@1,COG3052@2	NA|NA|NA	C	Covalent carrier of the coenzyme of citrate lyase
PAKBJLMI_00580	272621.LBA0916	1.4e-167	595.5	Lactobacillaceae	citE		4.1.3.25,4.1.3.34	ko:K01644,ko:K18292	ko00660,ko01100,ko02020,map00660,map01100,map02020		R00237,R00362	RC00067,RC00502,RC01118,RC01205	ko00000,ko00001,ko01000				Bacteria	1TPDY@1239,3F47Q@33958,4HD40@91061,COG2301@1,COG2301@2	NA|NA|NA	G	Belongs to the HpcH HpaI aldolase family
PAKBJLMI_00581	272621.LBA0917	9.2e-289	998.8	Lactobacillaceae	citF	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464	2.8.3.10	ko:K01643	ko02020,map02020		R00362	RC00067,RC01118	ko00000,ko00001,ko01000			iEcSMS35_1347.EcSMS35_0634	Bacteria	1TPN3@1239,3F4EA@33958,4HAE1@91061,COG3051@1,COG3051@2	NA|NA|NA	H	Citrate (pro-3S)-lyase alpha chain
PAKBJLMI_00582	272621.LBA0919	9.3e-72	276.2	Lactobacillaceae	yeaL	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944											Bacteria	1V7JN@1239,3F68U@33958,4HINS@91061,COG2707@1,COG2707@2	NA|NA|NA	S	Protein of unknown function (DUF441)
PAKBJLMI_00583	1033837.WANG_0743	3.3e-13	80.1	Lactobacillaceae													Bacteria	1U6Q0@1239,29PJU@1,30AHZ@2,3F8A1@33958,4IGGY@91061	NA|NA|NA		
PAKBJLMI_00584	272621.LBA0920	1.5e-127	462.2	Lactobacillaceae	cbiQ			ko:K16785,ko:K16786,ko:K16787	ko02010,map02010	M00582			ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.25,3.A.1.28,3.A.1.29,3.A.1.30,3.A.1.31,3.A.1.32,3.A.1.33,3.A.1.35		iSB619.SA_RS14165	Bacteria	1TPMV@1239,3F3Y9@33958,4HBTW@91061,COG0619@1,COG0619@2	NA|NA|NA	P	cobalt transport
PAKBJLMI_00585	272621.LBA0921	0.0	1111.3	Lactobacillaceae	ykoD	GO:0003674,GO:0003824,GO:0005215,GO:0006810,GO:0008150,GO:0015399,GO:0015405,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0042623,GO:0042626,GO:0043492,GO:0051179,GO:0051234,GO:0055085		ko:K02006,ko:K16786,ko:K16787	ko02010,map02010	M00245,M00246,M00582			ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.18,3.A.1.22,3.A.1.23,3.A.1.25,3.A.1.28,3.A.1.29,3.A.1.30,3.A.1.31,3.A.1.32,3.A.1.33,3.A.1.35			Bacteria	1TPH8@1239,3F4XP@33958,4HAJM@91061,COG1122@1,COG1122@2	NA|NA|NA	P	ABC transporter, ATP-binding protein
PAKBJLMI_00586	272621.LBA0922	7.4e-95	353.2	Lactobacillaceae				ko:K16924,ko:K16927		M00582			ko00000,ko00002,ko02000	3.A.1.29,3.A.1.32			Bacteria	1V1GT@1239,3F5A7@33958,4HGAE@91061,COG4720@1,COG4720@2	NA|NA|NA	S	UPF0397 protein
PAKBJLMI_00587	272621.LBA0923	3.8e-63	247.3	Lactobacillaceae													Bacteria	1U6UG@1239,29PNX@1,30AM4@2,3F8I6@33958,4IGNA@91061	NA|NA|NA	S	Domain of unknown function DUF1828
PAKBJLMI_00588	272621.LBA0924	2.2e-54	218.0	Lactobacillaceae													Bacteria	1W494@1239,2CHWU@1,34CGV@2,3F71N@33958,4HZJS@91061	NA|NA|NA		
PAKBJLMI_00589	272621.LBA0925	3.4e-177	627.5	Lactobacillaceae	citR												Bacteria	1VSYQ@1239,3FCBZ@33958,4HU6A@91061,COG2390@1,COG2390@2	NA|NA|NA	K	Putative sugar-binding domain
PAKBJLMI_00590	272621.LBA0927	5.5e-245	853.2	Lactobacillaceae	yjjP												Bacteria	1TNZH@1239,3F4FR@33958,4HU4D@91061,COG2966@1,COG2966@2,COG3610@1,COG3610@2	NA|NA|NA	S	Putative threonine/serine exporter
PAKBJLMI_00591	272621.LBA0930	5.7e-84	317.0	Lactobacillaceae	ybaK			ko:K03976					ko00000,ko01000,ko03016				Bacteria	1V6JF@1239,3F5H1@33958,4HHVB@91061,COG2606@1,COG2606@2	NA|NA|NA	S	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
PAKBJLMI_00592	272621.LBA0931	1e-173	615.9	Lactobacillaceae	prmA			ko:K02687					ko00000,ko01000,ko03009				Bacteria	1TPKI@1239,3F47Z@33958,4HAMF@91061,COG2264@1,COG2264@2	NA|NA|NA	J	Ribosomal protein L11 methyltransferase
PAKBJLMI_00593	525365.HMPREF0548_0978	4e-49	200.7	Lactobacillaceae													Bacteria	1U6F0@1239,29PCU@1,30AB2@2,3F7RV@33958,4IG6U@91061	NA|NA|NA		
PAKBJLMI_00594	272621.LBA0932	0.0	1485.7	Lactobacillaceae	relA	GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0008728,GO:0008893,GO:0009116,GO:0009117,GO:0009119,GO:0009150,GO:0009259,GO:0009605,GO:0009987,GO:0009991,GO:0015969,GO:0016020,GO:0016740,GO:0016772,GO:0016778,GO:0016787,GO:0016788,GO:0016794,GO:0019637,GO:0019693,GO:0030312,GO:0031667,GO:0033865,GO:0033875,GO:0034032,GO:0034035,GO:0034641,GO:0042278,GO:0042578,GO:0042594,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0046128,GO:0046483,GO:0050896,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:1901068,GO:1901135,GO:1901360,GO:1901564,GO:1901657	2.7.6.5	ko:K00951	ko00230,map00230		R00429	RC00002,RC00078	ko00000,ko00001,ko01000			iHN637.CLJU_RS16615,iYO844.BSU27600	Bacteria	1TNYZ@1239,3F44F@33958,4HBX7@91061,COG0317@1,COG0317@2	NA|NA|NA	KT	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
PAKBJLMI_00595	272621.LBA0933	1e-75	289.3	Lactobacillaceae	dtd	GO:0002161,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051499,GO:0051500,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106026,GO:0106074,GO:0140098,GO:0140101,GO:1901360		ko:K07560					ko00000,ko01000,ko03016				Bacteria	1V6GH@1239,3F6GK@33958,4HINN@91061,COG1490@1,COG1490@2	NA|NA|NA	J	rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
PAKBJLMI_00596	272621.LBA0935	1.2e-244	852.0	Lactobacillaceae	hisS		6.1.1.21	ko:K01892	ko00970,map00970	M00359,M00360	R03655	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016				Bacteria	1TP3D@1239,3F3M3@33958,4HAM2@91061,COG0124@1,COG0124@2	NA|NA|NA	J	histidyl-tRNA synthetase
PAKBJLMI_00597	272621.LBA0936	0.0	1247.6	Lactobacillaceae	aspS		6.1.1.12	ko:K01876	ko00970,map00970	M00359,M00360	R05577	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029				Bacteria	1TPCN@1239,3F4PE@33958,4HACD@91061,COG0173@1,COG0173@2	NA|NA|NA	J	Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
PAKBJLMI_00598	272621.LBA0937	2.5e-225	787.7	Lactobacillaceae	patA		2.6.1.1	ko:K00812,ko:K00841,ko:K10907	ko00220,ko00250,ko00270,ko00300,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00300,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230	M00525	R00355,R00694,R00734,R00896,R02433,R02619,R04467,R05052	RC00006	ko00000,ko00001,ko00002,ko01000,ko01007				Bacteria	1TP0J@1239,3F3MX@33958,4HA13@91061,COG0436@1,COG0436@2	NA|NA|NA	E	Aminotransferase
PAKBJLMI_00599	272621.LBA0939	2.8e-224	784.3	Lactobacillaceae	coaBC		4.1.1.36,6.3.2.5	ko:K01598,ko:K13038	ko00770,ko01100,map00770,map01100	M00120	R03269,R04231	RC00064,RC00090,RC00822	ko00000,ko00001,ko00002,ko01000				Bacteria	1TPP3@1239,3F3XX@33958,4HAK8@91061,COG0452@1,COG0452@2	NA|NA|NA	H	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
PAKBJLMI_00600	272621.LBA0940	3.5e-154	550.8	Lactobacillaceae													Bacteria	1TPM1@1239,3FB4S@33958,4HAG6@91061,COG0656@1,COG0656@2	NA|NA|NA	S	reductase
PAKBJLMI_00601	272621.LBA0941	1.6e-151	542.0	Lactobacillaceae	yxeH												Bacteria	1TR16@1239,3F55S@33958,4HCZ6@91061,COG0561@1,COG0561@2	NA|NA|NA	S	hydrolase
PAKBJLMI_00602	272621.LBA0942	3.1e-181	641.0	Lactobacillaceae	gyaR		1.1.1.26,2.7.1.165	ko:K00015,ko:K11529,ko:K15893	ko00030,ko00260,ko00561,ko00630,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00260,map00561,map00630,map00680,map01100,map01110,map01120,map01130,map01200	M00346,M00532	R00717,R01388,R08572	RC00002,RC00031,RC00042,RC00428	ko00000,ko00001,ko00002,ko01000				Bacteria	1TPCX@1239,3FB6D@33958,4HUAD@91061,COG1052@1,COG1052@2	NA|NA|NA	CH	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PAKBJLMI_00603	326425.lhe_0944	3.9e-230	803.9	Lactobacillaceae	yfnA			ko:K03294					ko00000	2.A.3.2			Bacteria	1TQ4K@1239,3F3QY@33958,4HA66@91061,COG0531@1,COG0531@2	NA|NA|NA	E	Amino Acid
PAKBJLMI_00604	272621.LBA0945	2.2e-108	398.3	Lactobacillaceae	dedA		3.1.3.1	ko:K01077	ko00730,ko00790,ko01100,ko02020,map00730,map00790,map01100,map02020	M00126	R02135,R04620	RC00017	ko00000,ko00001,ko00002,ko00537,ko01000,ko04147				Bacteria	1V2XQ@1239,3FBF1@33958,4IPZ1@91061,COG0586@1,COG0586@2	NA|NA|NA	S	SNARE associated Golgi protein
PAKBJLMI_00605	272621.LBA0946	0.0	1199.9	Lactobacillaceae	uvrC			ko:K03703	ko03420,map03420				ko00000,ko00001,ko03400				Bacteria	1TP4B@1239,3F3MY@33958,4H9QH@91061,COG0322@1,COG0322@2	NA|NA|NA	L	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
PAKBJLMI_00606	272621.LBA0947	1.7e-243	848.2	Lactobacillaceae	obg	GO:0000003,GO:0000160,GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0007154,GO:0007165,GO:0008150,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019954,GO:0023052,GO:0030436,GO:0032502,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035556,GO:0035639,GO:0036094,GO:0043021,GO:0043022,GO:0043167,GO:0043168,GO:0043934,GO:0044424,GO:0044464,GO:0044877,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0097159,GO:0097367,GO:1901265,GO:1901363		ko:K03979					ko00000,ko01000,ko03009				Bacteria	1TPX7@1239,3F4ZA@33958,4H9P8@91061,COG0536@1,COG0536@2	NA|NA|NA	S	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
PAKBJLMI_00607	272621.LBA0948	1.8e-213	748.4	Lactobacillaceae													Bacteria	1TPTG@1239,3F3WT@33958,4HB7R@91061,COG1835@1,COG1835@2	NA|NA|NA	I	Acyltransferase
PAKBJLMI_00608	272621.LBA0948	2e-91	341.7	Lactobacillaceae													Bacteria	1TPTG@1239,3F3WT@33958,4HB7R@91061,COG1835@1,COG1835@2	NA|NA|NA	I	Acyltransferase
PAKBJLMI_00609	272621.LBA0949	2.1e-179	634.8	Lactobacillaceae	rnz	GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004527,GO:0004532,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016796,GO:0016891,GO:0016893,GO:0016896,GO:0031123,GO:0034414,GO:0034470,GO:0034641,GO:0034660,GO:0042779,GO:0042780,GO:0042781,GO:0043167,GO:0043169,GO:0043170,GO:0043628,GO:0044237,GO:0044238,GO:0046483,GO:0046872,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0090503,GO:0140098,GO:1901360,GO:1905267	3.1.26.11	ko:K00784	ko03013,map03013				ko00000,ko00001,ko01000,ko03016				Bacteria	1TRGP@1239,3F4F1@33958,4HABM@91061,COG1234@1,COG1234@2	NA|NA|NA	J	Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
PAKBJLMI_00610	272621.LBA0950	7.2e-144	516.5	Lactobacillaceae	XK27_05435		1.1.1.100	ko:K00059,ko:K07124	ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212	M00083,M00572	R04533,R04534,R04536,R04543,R04566,R04953,R04964,R07759,R07763,R10116,R10120,R11671	RC00029,RC00117	ko00000,ko00001,ko00002,ko01000,ko01004				Bacteria	1TSJ3@1239,3F41Y@33958,4HI3D@91061,COG0300@1,COG0300@2	NA|NA|NA	S	Belongs to the short-chain dehydrogenases reductases (SDR) family
PAKBJLMI_00611	272621.LBA0951	5.1e-32	143.3	Lactobacillaceae	yrvD			ko:K08992					ko00000				Bacteria	1VIG5@1239,3F7IW@33958,4HP5V@91061,COG5416@1,COG5416@2	NA|NA|NA	S	Lipopolysaccharide assembly protein A domain
PAKBJLMI_00612	1423748.BALB01000010_gene1125	7.6e-28	129.0	Lactobacillaceae	rpmF	GO:0000027,GO:0000302,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006950,GO:0006979,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009628,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042221,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050896,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1901700,GO:1990904		ko:K02911	ko03010,map03010	M00178			br01610,ko00000,ko00001,ko00002,ko03011,ko03029				Bacteria	1VKMZ@1239,3F7ZT@33958,4HR2Q@91061,COG0333@1,COG0333@2	NA|NA|NA	J	Belongs to the bacterial ribosomal protein bL32 family
PAKBJLMI_00613	272621.LBA0953	0.0	1075.8	Lactobacillaceae	cpdB		3.1.3.6,3.1.4.16	ko:K01119	ko00230,ko00240,map00230,map00240		R01562,R01877,R02148,R02370,R03537,R03538,R03929,R05135	RC00078,RC00296	ko00000,ko00001,ko01000				Bacteria	1TPV2@1239,3F45U@33958,4HC2M@91061,COG0737@1,COG0737@2	NA|NA|NA	F	Belongs to the 5'-nucleotidase family
PAKBJLMI_00615	272621.LBA0955	0.0	2026.1	Lactobacillaceae	dnaE		2.7.7.7	ko:K02337	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400				Bacteria	1TPYG@1239,3F4AM@33958,4H9T3@91061,COG0587@1,COG0587@2	NA|NA|NA	L	DNA polymerase
PAKBJLMI_00616	272621.LBA0956	7.3e-183	646.4	Lactobacillaceae	pfkA	GO:0003674,GO:0003824,GO:0003872,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006116,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008443,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016052,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017144,GO:0018130,GO:0019200,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019674,GO:0019693,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046835,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0061615,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576	2.7.1.11	ko:K00850	ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04152,ko05230,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04152,map05230	M00001,M00345	R00756,R03236,R03237,R03238,R03239,R04779	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000,ko01009,ko03019			iYO844.BSU29190	Bacteria	1TPF4@1239,3F4CC@33958,4HAPN@91061,COG0205@1,COG0205@2	NA|NA|NA	F	Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
PAKBJLMI_00617	272621.LBA0957	0.0	1127.1	Lactobacillaceae	pyk	GO:0001871,GO:0003674,GO:0003824,GO:0004743,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006116,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009266,GO:0009408,GO:0009628,GO:0009986,GO:0009987,GO:0016043,GO:0016052,GO:0016053,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019674,GO:0019693,GO:0019752,GO:0022607,GO:0030246,GO:0030247,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042802,GO:0042866,GO:0043436,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0050896,GO:0051186,GO:0051188,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055086,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:2001065	2.7.1.40,2.7.7.4	ko:K00873,ko:K00958	ko00010,ko00230,ko00261,ko00450,ko00620,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00261,map00450,map00620,map00920,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230	M00001,M00002,M00049,M00050,M00176,M00596	R00200,R00430,R00529,R01138,R01858,R02320,R04929	RC00002,RC00015,RC02809,RC02889	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147			iECO103_1326.ECO103_1819,iPC815.YPO2393	Bacteria	1TPGG@1239,3F3JU@33958,4H9VY@91061,COG0469@1,COG0469@2	NA|NA|NA	G	Belongs to the pyruvate kinase family
PAKBJLMI_00618	272621.LBA0958	5e-170	603.6	Lactobacillaceae	cvfB			ko:K00243					ko00000				Bacteria	1TQ1Z@1239,3F44W@33958,4HDAZ@91061,COG2996@1,COG2996@2	NA|NA|NA	S	S1 domain
PAKBJLMI_00619	272621.LBA0959	1.6e-168	598.6	Lactobacillaceae	xerD			ko:K03733,ko:K04763					ko00000,ko03036				Bacteria	1TQRG@1239,3F3V9@33958,4HAEX@91061,COG4974@1,COG4974@2	NA|NA|NA	D	recombinase XerD
PAKBJLMI_00620	272621.LBA0960	1.7e-60	238.4	Lactobacillaceae	ribT			ko:K02859					ko00000				Bacteria	1VAD7@1239,3F7QC@33958,4HKR2@91061,COG0454@1,COG0456@2	NA|NA|NA	K	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PAKBJLMI_00621	272621.LBA0961	1.3e-131	475.7	Lactobacillaceae	scpA	GO:0003674,GO:0005488,GO:0005515,GO:0042802		ko:K05896					ko00000,ko03036				Bacteria	1TRW3@1239,3F4FS@33958,4HA6Q@91061,COG1354@1,COG1354@2	NA|NA|NA	D	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
PAKBJLMI_00622	272621.LBA0962	3.2e-104	384.4	Lactobacillaceae	scpB	GO:0003674,GO:0005488,GO:0005515,GO:0042802		ko:K06024					ko00000,ko03036				Bacteria	1V6HI@1239,3F5RN@33958,4HIQ0@91061,COG1386@1,COG1386@2	NA|NA|NA	D	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
PAKBJLMI_00623	272621.LBA0964	3.8e-128	464.2	Lactobacillaceae	rluB	GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360	5.4.99.19,5.4.99.21,5.4.99.22	ko:K06178,ko:K06182,ko:K06183					ko00000,ko01000,ko03009				Bacteria	1TP68@1239,3F402@33958,4H9MU@91061,COG1187@1,COG1187@2	NA|NA|NA	J	Belongs to the pseudouridine synthase RsuA family
PAKBJLMI_00624	272621.LBA0965	5.3e-14	82.4	Lactobacillaceae													Bacteria	1V4BW@1239,3F4HD@33958,4HHFT@91061,COG3601@1,COG3601@2	NA|NA|NA	U	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
PAKBJLMI_00625	272621.LBA0965	2.4e-81	308.1	Lactobacillaceae													Bacteria	1V4BW@1239,3F4HD@33958,4HHFT@91061,COG3601@1,COG3601@2	NA|NA|NA	U	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
PAKBJLMI_00626	272621.LBA0966	1.1e-46	193.0	Lactobacillaceae													Bacteria	1W2PN@1239,3F6G9@33958,4I0F8@91061,COG1388@1,COG1388@2	NA|NA|NA	M	Lysin motif
PAKBJLMI_00627	272621.LBA0967	8.4e-114	416.4	Lactobacillaceae	cmk	GO:0003674,GO:0003824,GO:0004127,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006573,GO:0006575,GO:0006725,GO:0006732,GO:0006753,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009117,GO:0009123,GO:0009165,GO:0009314,GO:0009628,GO:0009987,GO:0010165,GO:0010212,GO:0015939,GO:0015940,GO:0015949,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0034654,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046939,GO:0046940,GO:0050145,GO:0050896,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605	1.17.7.4,2.5.1.19,2.7.1.26,2.7.4.25,2.7.7.2,6.3.2.1	ko:K00800,ko:K00945,ko:K02945,ko:K03527,ko:K03977,ko:K11753,ko:K13799	ko00240,ko00400,ko00410,ko00740,ko00770,ko00900,ko01100,ko01110,ko01130,ko01230,ko03010,map00240,map00400,map00410,map00740,map00770,map00900,map01100,map01110,map01130,map01230,map03010	M00022,M00052,M00096,M00119,M00125,M00178	R00158,R00161,R00512,R00549,R01665,R02473,R03460,R05884,R08210	RC00002,RC00017,RC00096,RC00141,RC00350,RC01137,RC01487	br01610,ko00000,ko00001,ko00002,ko01000,ko03009,ko03011			iPC815.YPO1391,iSDY_1059.SDY_2348	Bacteria	1V3IA@1239,3F3W4@33958,4HFZE@91061,COG0283@1,COG0283@2	NA|NA|NA	F	Belongs to the cytidylate kinase family. Type 1 subfamily
PAKBJLMI_00628	272621.LBA0968	2.3e-202	711.4	Lactobacillaceae	rpsA		1.17.7.4	ko:K02945,ko:K03527	ko00900,ko01100,ko01110,ko01130,ko03010,map00900,map01100,map01110,map01130,map03010	M00096,M00178	R05884,R08210	RC01137,RC01487	br01610,ko00000,ko00001,ko00002,ko01000,ko03011				Bacteria	1TQ9N@1239,3F4DQ@33958,4H9PX@91061,COG0539@1,COG0539@2	NA|NA|NA	J	Ribosomal protein S1
PAKBJLMI_00629	272621.LBA0969	1.3e-246	858.6	Lactobacillaceae	der	GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0030312,GO:0040007,GO:0044464,GO:0071944	1.1.1.399,1.1.1.95	ko:K00058,ko:K03977	ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230	M00020	R01513	RC00031	ko00000,ko00001,ko00002,ko01000,ko03009,ko04147				Bacteria	1TPNM@1239,3F4V0@33958,4HAJ6@91061,COG1160@1,COG1160@2	NA|NA|NA	S	GTPase that plays an essential role in the late steps of ribosome biogenesis
PAKBJLMI_00630	1423748.BALB01000009_gene1004	3.9e-41	173.7	Lactobacillaceae	hup			ko:K03530					ko00000,ko03032,ko03036,ko03400				Bacteria	1V9XQ@1239,3F6YN@33958,4HKF2@91061,COG0776@1,COG0776@2	NA|NA|NA	L	Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
PAKBJLMI_00631	272621.LBA0971	2.1e-230	804.7	Lactobacillaceae													Bacteria	1TT97@1239,3F3ND@33958,4HAIA@91061,COG0457@1,COG0457@2	NA|NA|NA	S	Tetratricopeptide repeat protein
PAKBJLMI_00632	272621.LBA0972	1.3e-162	578.9	Lactobacillaceae	ypjC												Bacteria	1TR9J@1239,3FC4M@33958,4H9N6@91061,COG1284@1,COG1284@2	NA|NA|NA	S	Uncharacterised 5xTM membrane BCR, YitT family COG1284
PAKBJLMI_00633	272621.LBA0973	1.1e-223	782.3	Lactobacillaceae	cca		2.7.7.19,2.7.7.72	ko:K00970,ko:K00974	ko03013,ko03018,map03013,map03018		R09382,R09383,R09384,R09386	RC00078	ko00000,ko00001,ko01000,ko03016,ko03019				Bacteria	1TQ2A@1239,3F3VH@33958,4HB2W@91061,COG0617@1,COG0617@2	NA|NA|NA	J	Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
PAKBJLMI_00634	272621.LBA0974	2.2e-106	391.7	Lactobacillaceae	hlyIII			ko:K11068					ko00000,ko02042				Bacteria	1TSFK@1239,3F578@33958,4HAT2@91061,COG1272@1,COG1272@2	NA|NA|NA	S	protein, hemolysin III
PAKBJLMI_00635	272621.LBA0975	3.6e-74	284.3	Lactobacillaceae	DegV												Bacteria	1TRM7@1239,3FC90@33958,4HBIR@91061,COG1307@1,COG1307@2	NA|NA|NA	S	Uncharacterised protein, DegV family COG1307
PAKBJLMI_00636	272621.LBA0975	2.1e-61	241.5	Lactobacillaceae	DegV												Bacteria	1TRM7@1239,3FC90@33958,4HBIR@91061,COG1307@1,COG1307@2	NA|NA|NA	S	Uncharacterised protein, DegV family COG1307
PAKBJLMI_00637	272621.LBA0976	2.7e-35	154.1	Lactobacillaceae	yozE												Bacteria	1VFI4@1239,3F7ZP@33958,4HR7P@91061,COG4479@1,COG4479@2	NA|NA|NA	S	Belongs to the UPF0346 family
PAKBJLMI_00638	272621.LBA0977	3.9e-282	976.9	Lactobacillaceae	yjcE	GO:0003674,GO:0005215,GO:0005451,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0006814,GO:0006873,GO:0006885,GO:0008150,GO:0008324,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015079,GO:0015081,GO:0015291,GO:0015297,GO:0015298,GO:0015299,GO:0015318,GO:0015385,GO:0015386,GO:0015491,GO:0015672,GO:0016020,GO:0019725,GO:0022804,GO:0022821,GO:0022857,GO:0022890,GO:0030001,GO:0030003,GO:0030004,GO:0030641,GO:0034220,GO:0035725,GO:0042592,GO:0044464,GO:0046873,GO:0048878,GO:0050801,GO:0051179,GO:0051234,GO:0051453,GO:0055067,GO:0055080,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071804,GO:0071805,GO:0071944,GO:0098655,GO:0098657,GO:0098659,GO:0098660,GO:0098662,GO:0098719,GO:0098739,GO:0098771,GO:0099516,GO:0099587,GO:1902600		ko:K03316					ko00000	2.A.36			Bacteria	1TR4G@1239,3F42V@33958,4HBJR@91061,COG0025@1,COG0025@2	NA|NA|NA	P	Sodium proton antiporter
PAKBJLMI_00639	272621.LBA0978	1e-159	569.3	Lactobacillaceae	ylqF	GO:0003674,GO:0003824,GO:0003924,GO:0008150,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0022613,GO:0042254,GO:0044085,GO:0071840		ko:K14540					ko00000,ko03009				Bacteria	1TQGK@1239,3F3MI@33958,4HA4D@91061,COG1161@1,COG1161@2	NA|NA|NA	S	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
PAKBJLMI_00640	272621.LBA0979	1.1e-133	482.6	Lactobacillaceae	rnhB	GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576	3.1.26.4	ko:K03470	ko03030,map03030				ko00000,ko00001,ko01000,ko03032				Bacteria	1V1D6@1239,3F3JC@33958,4HB7M@91061,COG0164@1,COG0164@2	NA|NA|NA	L	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PAKBJLMI_00641	272621.LBA0980	3.6e-157	560.8	Lactobacillaceae	dprA	GO:0007154,GO:0008150,GO:0009292,GO:0009294,GO:0009605,GO:0009987,GO:0009991,GO:0030420,GO:0031668,GO:0044764,GO:0050896,GO:0051704,GO:0051716,GO:0071496		ko:K04096					ko00000				Bacteria	1TPP7@1239,3F41U@33958,4HGWM@91061,COG0758@1,COG0758@2	NA|NA|NA	LU	DNA protecting protein DprA
PAKBJLMI_00642	272621.LBA0981	0.0	1316.6	Lactobacillaceae	topA		5.99.1.2	ko:K03168					ko00000,ko01000,ko03032,ko03400				Bacteria	1TPUS@1239,3F3VS@33958,4HA6C@91061,COG0550@1,COG0550@2	NA|NA|NA	L	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
PAKBJLMI_00643	272621.LBA0982	1.8e-248	864.8	Lactobacillaceae	trmFO	GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363	2.1.1.74	ko:K04094					ko00000,ko01000,ko03016,ko03036				Bacteria	1TP67@1239,3F3WW@33958,4HB27@91061,COG1206@1,COG1206@2	NA|NA|NA	J	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
PAKBJLMI_00644	272621.LBA0983	7.3e-169	599.7	Lactobacillaceae	xerC			ko:K03733,ko:K04763					ko00000,ko03036				Bacteria	1TQRG@1239,3FBHU@33958,4IQMI@91061,COG4974@1,COG4974@2	NA|NA|NA	D	Phage integrase, N-terminal SAM-like domain
PAKBJLMI_00645	272621.LBA0984	1.1e-89	335.9	Lactobacillaceae	hslV	GO:0000166,GO:0000287,GO:0000502,GO:0003674,GO:0003824,GO:0004175,GO:0004298,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0006950,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009266,GO:0009376,GO:0009408,GO:0009628,GO:0009987,GO:0016043,GO:0016787,GO:0017076,GO:0019538,GO:0019904,GO:0022607,GO:0030163,GO:0030554,GO:0031597,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0034214,GO:0035639,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046872,GO:0050896,GO:0051259,GO:0051603,GO:0065003,GO:0070003,GO:0070011,GO:0071704,GO:0071840,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1904949,GO:1905368,GO:1905369	3.4.25.2	ko:K01419					ko00000,ko01000,ko01002				Bacteria	1TPXK@1239,3F4HS@33958,4H9PD@91061,COG5405@1,COG5405@2	NA|NA|NA	O	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
PAKBJLMI_00646	272621.LBA0985	1.7e-233	815.1	Lactobacillaceae	hslU	GO:0000166,GO:0000287,GO:0000502,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0006950,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009266,GO:0009376,GO:0009408,GO:0009628,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0019904,GO:0022607,GO:0030554,GO:0031597,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0034214,GO:0035639,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043335,GO:0043933,GO:0044085,GO:0044238,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046872,GO:0050896,GO:0051259,GO:0065003,GO:0071704,GO:0071840,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1902494,GO:1904949,GO:1905368,GO:1905369		ko:K03667					ko00000,ko03110				Bacteria	1TPKQ@1239,3F3WB@33958,4HA83@91061,COG1220@1,COG1220@2	NA|NA|NA	O	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
PAKBJLMI_00647	272621.LBA0986	2.7e-179	634.4	Lactobacillaceae	lacX		5.1.3.3	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	M00632	R01602,R10619	RC00563	ko00000,ko00001,ko00002,ko01000				Bacteria	1U26T@1239,3F3KT@33958,4HA4J@91061,COG2017@1,COG2017@2	NA|NA|NA	G	Aldose 1-epimerase
PAKBJLMI_00648	272621.LBA0987	1.5e-65	255.4	Lactobacillaceae													Bacteria	1VKTU@1239,2DS5S@1,33ENY@2,3F6MW@33958,4HSXX@91061	NA|NA|NA		
PAKBJLMI_00649	272621.LBA0989	3.8e-232	810.4	Lactobacillaceae	pts13C			ko:K02761	ko00500,ko02060,map00500,map02060	M00275	R11170,R11172	RC00017,RC03206	ko00000,ko00001,ko00002,ko02000	4.A.3.2			Bacteria	1V5SI@1239,3F3Z5@33958,4HJTK@91061,COG1455@1,COG1455@2	NA|NA|NA	G	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PAKBJLMI_00650	272621.LBA0990	3.2e-158	564.3	Lactobacillaceae													Bacteria	1V8NG@1239,3F41V@33958,4HJ22@91061,COG4814@1,COG4814@2	NA|NA|NA	S	Alpha/beta hydrolase of unknown function (DUF915)
PAKBJLMI_00651	272621.LBA0991	1.4e-150	538.9	Lactobacillaceae	xerD			ko:K04763					ko00000,ko03036				Bacteria	1UFH8@1239,3F3KV@33958,4IES1@91061,COG4974@1,COG4974@2	NA|NA|NA	L	Phage integrase, N-terminal SAM-like domain
PAKBJLMI_00652	272621.LBA0992	3.5e-67	260.8	Lactobacillaceae	crcB			ko:K06199					ko00000,ko02000	1.A.43.1,1.A.43.2,1.A.43.3			Bacteria	1U4G6@1239,3F6R4@33958,4IE88@91061,COG0239@1,COG0239@2	NA|NA|NA	U	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PAKBJLMI_00653	272621.LBA0993	1.1e-62	245.7	Lactobacillaceae	crcB	GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015103,GO:0015318,GO:0015698,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098656,GO:0098660,GO:0098661,GO:1903424,GO:1903425		ko:K06199					ko00000,ko02000	1.A.43.1,1.A.43.2,1.A.43.3			Bacteria	1VM30@1239,3F8A8@33958,4HRC4@91061,COG0239@1,COG0239@2	NA|NA|NA	U	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PAKBJLMI_00654	272621.LBA0994	6.9e-275	952.6	Lactobacillaceae	pepV		3.5.1.18	ko:K01270,ko:K01439	ko00300,ko00480,ko01100,ko01120,ko01230,map00300,map00480,map01100,map01120,map01230	M00016	R00899,R02734,R04951	RC00064,RC00090,RC00096,RC00141	ko00000,ko00001,ko00002,ko01000,ko01002				Bacteria	1TPEG@1239,3F3UV@33958,4HC14@91061,COG0624@1,COG0624@2	NA|NA|NA	E	dipeptidase PepV
PAKBJLMI_00655	272621.LBA0995	5.3e-286	989.6	Lactobacillaceae				ko:K20265	ko02024,map02024				ko00000,ko00001,ko02000	2.A.3.7.1,2.A.3.7.3			Bacteria	1UYSD@1239,3F48U@33958,4IPMN@91061,COG0531@1,COG0531@2	NA|NA|NA	E	Amino acid permease
PAKBJLMI_00656	272621.LBA0996	0.0	1421.0	Lactobacillaceae	yaaO		4.1.1.17,4.1.1.19	ko:K01581,ko:K01585	ko00330,ko00480,ko01100,ko01110,ko01130,map00330,map00480,map01100,map01110,map01130	M00133,M00134	R00566,R00670	RC00299	ko00000,ko00001,ko00002,ko01000				Bacteria	1TNZ9@1239,3F3TV@33958,4HBGC@91061,COG1982@1,COG1982@2	NA|NA|NA	E	Orn/Lys/Arg decarboxylase, C-terminal domain
PAKBJLMI_00657	272621.LBA0997	3.2e-247	860.5	Lactobacillaceae	ynbB	GO:0003674,GO:0003824,GO:0003962,GO:0004123,GO:0016740,GO:0016765,GO:0016829,GO:0016846	4.4.1.1	ko:K01758	ko00260,ko00270,ko00450,ko01100,ko01130,ko01230,map00260,map00270,map00450,map01100,map01130,map01230	M00338	R00782,R01001,R02408,R04770,R04930,R09366	RC00056,RC00069,RC00348,RC00382,RC00710,RC01209,RC01210,RC01245,RC02303	ko00000,ko00001,ko00002,ko01000,ko04147				Bacteria	1TQ88@1239,3F3PU@33958,4HAF5@91061,COG4100@1,COG4100@2	NA|NA|NA	P	aluminum resistance
PAKBJLMI_00658	272621.LBA0998	3.9e-119	434.1	Lactobacillaceae	ktrA			ko:K03499					ko00000,ko02000	2.A.38.1,2.A.38.4			Bacteria	1TQ9H@1239,3F5G0@33958,4HBPH@91061,COG0569@1,COG0569@2	NA|NA|NA	P	domain protein
PAKBJLMI_00659	272621.LBA0999	4e-240	837.0	Lactobacillaceae	ktrB			ko:K03498					ko00000,ko02000	2.A.38.1,2.A.38.4			Bacteria	1TQ4S@1239,3F5BE@33958,4H9ME@91061,COG0168@1,COG0168@2	NA|NA|NA	P	Potassium uptake protein
PAKBJLMI_00660	272621.LBA1000	0.0	1180.6	Lactobacillaceae	recQ	GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003824,GO:0004003,GO:0004386,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005694,GO:0005737,GO:0006139,GO:0006259,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0009295,GO:0009378,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032392,GO:0032508,GO:0033554,GO:0034641,GO:0042623,GO:0043138,GO:0043140,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043590,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051276,GO:0051716,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0140097,GO:1901360,GO:1901363	3.6.4.12	ko:K03654	ko03018,map03018				ko00000,ko00001,ko01000,ko03400				Bacteria	1TPN5@1239,3F4PY@33958,4H9QP@91061,COG0514@1,COG0514@2	NA|NA|NA	L	ATP-dependent DNA helicase RecQ
PAKBJLMI_00661	272621.LBA1001	1.7e-81	308.5	Lactobacillaceae													Bacteria	1V465@1239,3F7H7@33958,4HN5X@91061,COG0716@1,COG0716@2	NA|NA|NA	C	Flavodoxin
PAKBJLMI_00662	272621.LBA1002	0.0	1659.8	Lactobacillaceae	uvrA3			ko:K03701	ko03420,map03420				ko00000,ko00001,ko03400				Bacteria	1TP0A@1239,3F3V4@33958,4HTDZ@91061,COG0178@1,COG0178@2	NA|NA|NA	L	excinuclease ABC, A subunit
PAKBJLMI_00663	272621.LBA1003	5.9e-182	643.3	Lactobacillaceae	mmuM	GO:0003674,GO:0003824,GO:0005488,GO:0006575,GO:0006790,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008168,GO:0008172,GO:0008270,GO:0008757,GO:0008898,GO:0009987,GO:0016740,GO:0016741,GO:0032259,GO:0033477,GO:0033554,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914,GO:0050896,GO:0051716,GO:0071704,GO:1901564	1.5.1.20,2.1.1.10	ko:K00297,ko:K00547	ko00270,ko00670,ko00720,ko01100,ko01110,ko01120,ko01200,ko01523,map00270,map00670,map00720,map01100,map01110,map01120,map01200,map01523	M00377	R00650,R01224,R07168	RC00003,RC00035,RC00081	ko00000,ko00001,ko00002,ko01000				Bacteria	1UHQ5@1239,3F4UT@33958,4HAS6@91061,COG2040@1,COG2040@2	NA|NA|NA	H	homocysteine S-methyltransferase
PAKBJLMI_00664	272621.LBA1004	1.8e-113	415.2	Lactobacillaceae			3.6.1.27	ko:K19302	ko00550,map00550		R05627	RC00002	ko00000,ko00001,ko01000,ko01011				Bacteria	1V7XD@1239,3FBEV@33958,4IPZ9@91061,COG0671@1,COG0671@2	NA|NA|NA	I	Acid phosphatase homologues
PAKBJLMI_00665	272621.LBA1005	4.5e-67	260.4	Lactobacillaceae	yvbK		3.1.3.25	ko:K01092	ko00521,ko00562,ko01100,ko04070,map00521,map00562,map01100,map04070	M00131	R01185,R01186,R01187	RC00078	ko00000,ko00001,ko00002,ko01000				Bacteria	1V3IC@1239,3F81Q@33958,4HH45@91061,COG0454@1,COG0456@2	NA|NA|NA	K	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PAKBJLMI_00666	272621.LBA1006	1.9e-208	731.5	Lactobacillaceae	pbpX1												Bacteria	1U52D@1239,3F440@33958,4IETU@91061,COG1680@1,COG1680@2	NA|NA|NA	V	Beta-lactamase
PAKBJLMI_00667	272621.LBA1007	1.5e-155	555.4	Lactobacillaceae	pdxK		2.7.1.35	ko:K00868	ko00750,ko01100,map00750,map01100		R00174,R01909,R02493	RC00002,RC00017	ko00000,ko00001,ko01000				Bacteria	1TRCR@1239,3F3V7@33958,4HHME@91061,COG2240@1,COG2240@2	NA|NA|NA	H	Phosphomethylpyrimidine kinase
PAKBJLMI_00668	272621.LBA1008	3.1e-93	347.8	Lactobacillaceae				ko:K16923		M00582			ko00000,ko00002,ko02000	3.A.1.28			Bacteria	1V52B@1239,3F4W9@33958,4HKM2@91061,COG4720@1,COG4720@2	NA|NA|NA	S	ECF-type riboflavin transporter, S component
PAKBJLMI_00669	272621.LBA1010	2.1e-216	758.1	Lactobacillaceae													Bacteria	1TQMA@1239,3F3QW@33958,4HDTN@91061,COG1376@1,COG1376@2	NA|NA|NA	S	Putative peptidoglycan binding domain
PAKBJLMI_00670	272621.LBA1011	6.5e-241	839.7	Lactobacillaceae													Bacteria	1U7D4@1239,29Q2I@1,30B16@2,3F9EM@33958,4IH8Z@91061	NA|NA|NA		
PAKBJLMI_00671	272621.LBA1012	0.0	1194.9	Lactobacillaceae	treB		2.7.1.208,2.7.1.211	ko:K02749,ko:K02750,ko:K02755,ko:K02756,ko:K02757,ko:K02777,ko:K02808,ko:K02809,ko:K02810	ko00010,ko00500,ko00520,ko02026,ko02060,ko05111,map00010,map00500,map00520,map02026,map02060,map05111	M00265,M00266,M00268,M00269,M00270,M00271,M00272,M00303,M00806	R00811,R02738,R02780,R04111,R04394,R05132,R08559	RC00017,RC03206	ko00000,ko00001,ko00002,ko01000,ko02000	4.A.1.1.1,4.A.1.1.10,4.A.1.1.16,4.A.1.1.4,4.A.1.1.8,4.A.1.2.1,4.A.1.2.10,4.A.1.2.11,4.A.1.2.12,4.A.1.2.2,4.A.1.2.5,4.A.1.2.6,4.A.1.2.9			Bacteria	1TP5X@1239,3F458@33958,4HA0I@91061,COG1263@1,COG1263@2,COG1264@1,COG1264@2,COG2190@1,COG2190@2	NA|NA|NA	G	phosphotransferase system
PAKBJLMI_00672	272621.LBA1013	8.6e-128	463.0	Lactobacillaceae	treR			ko:K03486,ko:K03492,ko:K03710					ko00000,ko03000				Bacteria	1TRF6@1239,3F62J@33958,4HDCX@91061,COG2188@1,COG2188@2	NA|NA|NA	K	UTRA
PAKBJLMI_00673	272621.LBA1014	0.0	1154.8	Lactobacillaceae	treC	GO:0003674,GO:0003824,GO:0004553,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005984,GO:0005991,GO:0005993,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008788,GO:0009056,GO:0009311,GO:0009313,GO:0009987,GO:0015927,GO:0016052,GO:0016787,GO:0016798,GO:0033554,GO:0044237,GO:0044238,GO:0044248,GO:0044262,GO:0044275,GO:0044424,GO:0044444,GO:0044464,GO:0046352,GO:0050896,GO:0051716,GO:0071704,GO:1901575	3.2.1.93	ko:K01226	ko00500,map00500		R00837,R06113	RC00049	ko00000,ko00001,ko01000		GH13	iECW_1372.ECW_m4600,iEKO11_1354.EKO11_4072,iEcE24377_1341.EcE24377A_4811,iEcSMS35_1347.EcSMS35_4720,iWFL_1372.ECW_m4600	Bacteria	1TP53@1239,3F41I@33958,4HA1G@91061,COG0366@1,COG0366@2	NA|NA|NA	G	Alpha amylase, catalytic domain protein
PAKBJLMI_00674	272621.LBA1015	1.8e-80	305.1	Lactobacillaceae													Bacteria	1UY0J@1239,3F549@33958,4IEZE@91061,COG0438@1,COG0438@2	NA|NA|NA	M	Glycosyl transferases group 1
PAKBJLMI_00675	272621.LBA1016	3.8e-99	367.5	Lactobacillaceae				ko:K02453	ko03070,ko05111,map03070,map05111	M00331			ko00000,ko00001,ko00002,ko02044	3.A.15			Bacteria	1VSP5@1239,3F4FY@33958,4HUK1@91061,COG3266@1,COG3266@2	NA|NA|NA	UW	LPXTG-motif cell wall anchor domain protein
PAKBJLMI_00676	272621.LBA1017	2.4e-164	584.7	Lactobacillaceae													Bacteria	1UHY6@1239,3FBS3@33958,4ISAK@91061,COG4932@1,COG4932@2	NA|NA|NA	M	domain protein
PAKBJLMI_00677	1423758.BN55_05265	2.6e-21	109.8	Lactobacillaceae	atl		3.2.1.96,3.5.1.28	ko:K13714					ko00000,ko01000		GH73		Bacteria	1VSP5@1239,3F4FY@33958,4HUK1@91061,COG3266@1,COG3266@2	NA|NA|NA	UW	LPXTG-motif cell wall anchor domain protein
PAKBJLMI_00678	272621.LBA1019	0.0	4357.0	Lactobacillaceae													Bacteria	1VSP5@1239,3F4FY@33958,4HUK1@91061,COG3266@1,COG3266@2	NA|NA|NA	UW	LPXTG-motif cell wall anchor domain protein
PAKBJLMI_00679	272621.LBA1020	0.0	3662.1	Lactobacillaceae													Bacteria	1VSP5@1239,3F4FY@33958,4HUK1@91061,COG3266@1,COG3266@2	NA|NA|NA	UW	LPXTG-motif cell wall anchor domain protein
PAKBJLMI_00680	272621.LBA1021	1.2e-28	131.7	Bacteria													Bacteria	COG0789@1,COG0789@2	NA|NA|NA	K	bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding
PAKBJLMI_00681	272621.LBA1022	8.8e-164	582.8	Lactobacillaceae	rocF		3.5.3.1,3.5.3.11	ko:K01476,ko:K01480	ko00220,ko00330,ko01100,ko01110,ko01130,ko01230,ko05146,map00220,map00330,map01100,map01110,map01130,map01230,map05146	M00029,M00133,M00134	R00551,R01157	RC00024,RC00329	ko00000,ko00001,ko00002,ko01000				Bacteria	1V1SH@1239,3FBNR@33958,4HGPJ@91061,COG0010@1,COG0010@2	NA|NA|NA	E	Arginase family
PAKBJLMI_00682	272621.LBA1023	2.1e-114	418.3	Lactobacillaceae	ylbE												Bacteria	1V8TX@1239,3FB6T@33958,4HJBS@91061,COG0702@1,COG0702@2	NA|NA|NA	GM	NAD dependent epimerase dehydratase family protein
PAKBJLMI_00683	272621.LBA1024	6.6e-159	566.6	Lactobacillaceae				ko:K02051		M00188			ko00000,ko00002,ko02000	3.A.1.16,3.A.1.17			Bacteria	1UZXK@1239,3F41Q@33958,4HUWT@91061,COG0583@1,COG0583@2	NA|NA|NA	K	Transcriptional regulator
PAKBJLMI_00684	272621.LBA1025	2.9e-167	594.3	Lactobacillaceae													Bacteria	1TPM1@1239,3F4IP@33958,4H9XJ@91061,COG0656@1,COG0656@2	NA|NA|NA	S	Oxidoreductase, aldo keto reductase family protein
PAKBJLMI_00685	272621.LBA1026	4.3e-166	590.5	Lactobacillaceae	akr5f		1.1.1.346	ko:K06221			R08878	RC00089	ko00000,ko01000				Bacteria	1TPM1@1239,3FB4Q@33958,4H9XJ@91061,COG0656@1,COG0656@2	NA|NA|NA	S	reductase
PAKBJLMI_00686	272621.LBA1027	2.7e-165	587.8	Lactobacillaceae	yvgN												Bacteria	1TPM1@1239,3F3PW@33958,4HARE@91061,COG0656@1,COG0656@2	NA|NA|NA	C	Aldo keto reductase
PAKBJLMI_00687	272621.LBA1029	4.1e-217	760.4	Lactobacillaceae													Bacteria	1UG8H@1239,29V6Q@1,30GKE@2,3F5M6@33958,4IF4J@91061	NA|NA|NA	S	SLAP domain
PAKBJLMI_00688	272621.LBA1030	4.1e-103	380.6	Lactobacillaceae	yyaR			ko:K06889					ko00000				Bacteria	1V6YX@1239,3F6BG@33958,4IQXU@91061,COG0454@1,COG0456@2	NA|NA|NA	K	Acetyltransferase (GNAT) domain
PAKBJLMI_00691	272621.LBA1033	6.8e-104	383.3	Lactobacillaceae													Bacteria	1V6XQ@1239,2BI70@1,32CC9@2,3F6PT@33958,4HKAI@91061	NA|NA|NA		
PAKBJLMI_00692	272621.LBA1034	6.8e-78	296.6	Lactobacillaceae													Bacteria	1VBAC@1239,3F7V2@33958,4HP07@91061,COG1959@1,COG1959@2	NA|NA|NA	K	Transcriptional regulator
PAKBJLMI_00693	272621.LBA1036	1.9e-245	854.7	Lactobacillaceae	brnQ	GO:0003333,GO:0003674,GO:0005215,GO:0005304,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0006855,GO:0006865,GO:0008150,GO:0008324,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015175,GO:0015179,GO:0015188,GO:0015190,GO:0015238,GO:0015318,GO:0015658,GO:0015711,GO:0015803,GO:0015804,GO:0015807,GO:0015818,GO:0015820,GO:0015829,GO:0015849,GO:0015893,GO:0016020,GO:0022857,GO:0034220,GO:0042221,GO:0042493,GO:0044464,GO:0046942,GO:0046943,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098655,GO:0098656,GO:1902475,GO:1903785,GO:1903825,GO:1905039		ko:K03311					ko00000	2.A.26			Bacteria	1TQIS@1239,3F3KC@33958,4HAKA@91061,COG1114@1,COG1114@2	NA|NA|NA	U	Component of the transport system for branched-chain amino acids
PAKBJLMI_00694	272621.LBA1037	3e-164	584.3	Lactobacillaceae													Bacteria	1TPM1@1239,3FB4S@33958,4HAG6@91061,COG0656@1,COG0656@2	NA|NA|NA	S	reductase
PAKBJLMI_00695	272621.LBA1038	1.3e-170	605.5	Lactobacillaceae													Bacteria	1W1FZ@1239,2FIUN@1,34AK2@2,3F4QI@33958,4HYXZ@91061	NA|NA|NA		
PAKBJLMI_00696	525365.HMPREF0548_1218	4.2e-33	147.1	Lactobacillaceae													Bacteria	1TP77@1239,3F3VP@33958,4HAZB@91061,COG0583@1,COG0583@2	NA|NA|NA	K	Transcriptional regulator
PAKBJLMI_00697	272621.LBA1042	9.3e-113	412.9	Lactobacillaceae	papP			ko:K02029		M00236			ko00000,ko00002,ko02000	3.A.1.3			Bacteria	1TRU3@1239,3F3XD@33958,4HGE1@91061,COG0765@1,COG0765@2	NA|NA|NA	P	ABC transporter, permease protein
PAKBJLMI_00698	272621.LBA1044	2.2e-77	295.4	Lactobacillaceae				ko:K02029,ko:K10040	ko02010,map02010	M00228,M00236			ko00000,ko00001,ko00002,ko02000	3.A.1.3			Bacteria	1TR7R@1239,3F45E@33958,4HGVA@91061,COG0765@1,COG0765@2	NA|NA|NA	P	ABC transporter permease
PAKBJLMI_00699	272621.LBA1045	3.5e-137	494.2	Lactobacillaceae	glnQ		3.6.3.21	ko:K02028		M00236			ko00000,ko00002,ko01000,ko02000	3.A.1.3			Bacteria	1TNYD@1239,3FC3P@33958,4HDK7@91061,COG1126@1,COG1126@2	NA|NA|NA	E	ABC transporter, ATP-binding protein
PAKBJLMI_00700	272621.LBA1046	7.7e-160	569.7	Lactobacillaceae	cjaA			ko:K02030		M00236			ko00000,ko00002,ko02000	3.A.1.3			Bacteria	1TT11@1239,3F54P@33958,4HFBQ@91061,COG0834@1,COG0834@2	NA|NA|NA	ET	ABC transporter substrate-binding protein
PAKBJLMI_00701	272621.LBA1047	8.3e-90	336.3	Lactobacillaceae	tpx		1.11.1.15	ko:K11065					ko00000,ko01000				Bacteria	1V474@1239,3F5VY@33958,4HFMW@91061,COG2077@1,COG2077@2	NA|NA|NA	O	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
PAKBJLMI_00702	272621.LBA1048	8.7e-110	402.9	Lactobacillaceae			5.4.2.11	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	M00001,M00002,M00003	R01518	RC00536	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147				Bacteria	1UXY8@1239,3F4JB@33958,4HFD9@91061,COG0406@1,COG0406@2	NA|NA|NA	G	Phosphoglycerate mutase family
PAKBJLMI_00703	272621.LBA1049	3.4e-174	617.5	Lactobacillaceae			4.1.1.45	ko:K03392,ko:K07045	ko00380,ko01100,map00380,map01100	M00038	R04323	RC00779	ko00000,ko00001,ko00002,ko01000				Bacteria	1TRAY@1239,3F485@33958,4HFH2@91061,COG2159@1,COG2159@2	NA|NA|NA	S	Amidohydrolase
PAKBJLMI_00704	1423767.BALU01000003_gene1075	1.1e-29	136.3	Lactobacillaceae													Bacteria	1U5S0@1239,29NX2@1,309V6@2,3F6ET@33958,4IFGA@91061	NA|NA|NA		
PAKBJLMI_00705	272621.LBA1050	2.5e-109	401.4	Lactobacillaceae													Bacteria	1U5RF@1239,2A1GN@1,30PQ9@2,3F6DA@33958,4IFFK@91061	NA|NA|NA		
PAKBJLMI_00706	272621.LBA1051	4.9e-108	397.1	Lactobacillaceae													Bacteria	1W6IZ@1239,28WK8@1,2ZIK8@2,3F68J@33958,4I01D@91061	NA|NA|NA		
PAKBJLMI_00707	272621.LBA1052	1.3e-130	472.2	Lactobacillaceae	yfeJ		6.3.5.2	ko:K01951	ko00230,ko00983,ko01100,map00230,map00983,map01100	M00050	R01230,R01231,R08244	RC00010,RC00204	ko00000,ko00001,ko00002,ko01000,ko01002				Bacteria	1UAH0@1239,3F4AV@33958,4HHTX@91061,COG0518@1,COG0518@2	NA|NA|NA	F	glutamine amidotransferase
PAKBJLMI_00708	272621.LBA1053	2.3e-215	754.6	Lactobacillaceae	ynfM												Bacteria	1TS0E@1239,3F5GE@33958,4HCEF@91061,COG0477@1,COG2814@2	NA|NA|NA	EGP	Major facilitator Superfamily
PAKBJLMI_00709	272621.LBA1054	1e-153	549.3	Lactobacillaceae													Bacteria	1UXNP@1239,3F6BX@33958,4I30M@91061,COG0583@1,COG0583@2	NA|NA|NA	K	Bacterial regulatory helix-turn-helix protein, lysR family
PAKBJLMI_00710	272621.LBA1055	8.2e-119	433.0	Lactobacillaceae			3.6.1.55	ko:K03574					ko00000,ko01000,ko03400				Bacteria	1U7WX@1239,3F4BS@33958,4HHQT@91061,COG1051@1,COG1051@2	NA|NA|NA	F	NUDIX domain
PAKBJLMI_00711	272621.LBA1056	1.3e-76	292.4	Lactobacillaceae													Bacteria	1U7JZ@1239,29Q6H@1,30B5G@2,3F9UP@33958,4IHH4@91061	NA|NA|NA		
PAKBJLMI_00712	272621.LBA1057	3.6e-87	327.4	Lactobacillaceae													Bacteria	1V7FG@1239,3F6Q4@33958,4HIUY@91061,COG0537@1,COG0537@2	NA|NA|NA	FG	HIT domain
PAKBJLMI_00713	272621.LBA1058	1.1e-62	245.7	Lactobacillaceae													Bacteria	1UPY9@1239,2DMQA@1,32SZE@2,3F6TX@33958,4IVD8@91061	NA|NA|NA		
PAKBJLMI_00714	272621.LBA1059	3.7e-93	347.4	Lactobacillaceae	rimL			ko:K03817					ko00000,ko01000,ko03009				Bacteria	1V3NE@1239,3F6YW@33958,4HG1N@91061,COG1670@1,COG1670@2	NA|NA|NA	J	Acetyltransferase (GNAT) domain
PAKBJLMI_00715	257314.LJ_1224	1.1e-101	376.3	Lactobacillaceae													Bacteria	1UV3Y@1239,3F3Q2@33958,4IDY5@91061,COG0596@1,COG0596@2	NA|NA|NA	S	Alpha/beta hydrolase family
PAKBJLMI_00716	272621.LBA1061	9.7e-101	372.9	Lactobacillaceae													Bacteria	1UJ2H@1239,2BHP6@1,32BS8@2,3F6A8@33958,4ISZQ@91061	NA|NA|NA		
PAKBJLMI_00717	272621.LBA1062	1.3e-71	276.2	Lactobacillaceae													Bacteria	1U63X@1239,2DKNN@1,30A2P@2,3F6Z9@33958,4IFTE@91061	NA|NA|NA		
PAKBJLMI_00718	272621.LBA1064	1.5e-146	525.4	Lactobacillaceae			2.4.2.3	ko:K00757	ko00240,ko00983,ko01100,map00240,map00983,map01100		R01876,R02484,R08229	RC00063	ko00000,ko00001,ko01000				Bacteria	1V6T2@1239,3FBN9@33958,4HCSE@91061,COG2820@1,COG2820@2	NA|NA|NA	F	Phosphorylase superfamily
PAKBJLMI_00719	272621.LBA1065	6.2e-108	396.7	Lactobacillaceae			5.4.2.11	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	M00001,M00002,M00003	R01518	RC00536	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147				Bacteria	1V54I@1239,3F6UM@33958,4HJ7S@91061,COG0406@1,COG0406@2	NA|NA|NA	G	Phosphoglycerate mutase family
PAKBJLMI_00720	272621.LBA1066	5.1e-147	526.9	Lactobacillaceae			2.4.2.3	ko:K00757	ko00240,ko00983,ko01100,map00240,map00983,map01100		R01876,R02484,R08229	RC00063	ko00000,ko00001,ko01000				Bacteria	1TQ71@1239,3F3UX@33958,4IRA8@91061,COG2820@1,COG2820@2	NA|NA|NA	F	Phosphorylase superfamily
PAKBJLMI_00721	272621.LBA1067	6e-85	320.1	Lactobacillaceae			2.4.2.3	ko:K00757	ko00240,ko00983,ko01100,map00240,map00983,map01100		R01876,R02484,R08229	RC00063	ko00000,ko00001,ko01000				Bacteria	1TQ71@1239,3F3UX@33958,4IRA8@91061,COG2820@1,COG2820@2	NA|NA|NA	F	Phosphorylase superfamily
PAKBJLMI_00722	272621.LBA1067	1.8e-50	204.9	Lactobacillaceae			2.4.2.3	ko:K00757	ko00240,ko00983,ko01100,map00240,map00983,map01100		R01876,R02484,R08229	RC00063	ko00000,ko00001,ko01000				Bacteria	1TQ71@1239,3F3UX@33958,4IRA8@91061,COG2820@1,COG2820@2	NA|NA|NA	F	Phosphorylase superfamily
PAKBJLMI_00723	272621.LBA1068	1.4e-112	412.1	Lactobacillaceae	yihX		3.1.3.10,3.8.1.2	ko:K01560,ko:K07025,ko:K20866	ko00010,ko00361,ko00625,ko01100,ko01120,map00010,map00361,map00625,map01100,map01120		R00947,R05287	RC00078,RC00697	ko00000,ko00001,ko01000				Bacteria	1V6I4@1239,3F5R0@33958,4IPZA@91061,COG1011@1,COG1011@2	NA|NA|NA	S	Haloacid dehalogenase-like hydrolase
PAKBJLMI_00724	272621.LBA1070	7.2e-36	156.0	Lactobacillaceae													Bacteria	1W48A@1239,2DTY5@1,33N6A@2,3F7WG@33958,4I01I@91061	NA|NA|NA		
PAKBJLMI_00725	97137.C821_00274	8.3e-53	213.0	Lactobacillaceae	mleP			ko:K07088					ko00000				Bacteria	1UY4N@1239,3F3S0@33958,4HDX5@91061,COG0679@1,COG0679@2	NA|NA|NA	S	Sodium Bile acid symporter family
PAKBJLMI_00726	272621.LBA1071	1.5e-91	342.4	Lactobacillaceae													Bacteria	1VM5V@1239,2EVIX@1,33NZ2@2,3F8YP@33958,4HSE6@91061	NA|NA|NA		
PAKBJLMI_00727	272621.LBA1072	1.3e-38	165.2	Lactobacillaceae													Bacteria	1U803@1239,29QF5@1,30BEG@2,3FADF@33958,4IHXG@91061	NA|NA|NA		
PAKBJLMI_00728	272621.LBA1074	1.8e-167	595.1	Lactobacillaceae	mleR	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464											Bacteria	1V5VW@1239,3F5D2@33958,4HHDY@91061,COG0583@1,COG0583@2	NA|NA|NA	K	LysR family
PAKBJLMI_00729	272621.LBA1075	0.0	1075.1	Lactobacillaceae	sfcA	GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006091,GO:0006113,GO:0008150,GO:0008152,GO:0009987,GO:0015980,GO:0016829,GO:0016830,GO:0016831,GO:0030145,GO:0036094,GO:0043167,GO:0043169,GO:0043464,GO:0044237,GO:0046872,GO:0046914,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0097159,GO:1901265,GO:1901363	1.1.1.38,4.1.1.101	ko:K00027,ko:K22212	ko00620,ko01120,ko01200,ko02020,map00620,map01120,map01200,map02020		R00214,R11074	RC00105,RC00282	ko00000,ko00001,ko01000				Bacteria	1TPJ3@1239,3F3RH@33958,4HBF1@91061,COG0281@1,COG0281@2	NA|NA|NA	C	Malic enzyme
PAKBJLMI_00730	272621.LBA1076	1.9e-101	375.2	Lactobacillaceae	ltrA												Bacteria	1VD7Y@1239,3F4QG@33958,4HMTW@91061,COG4292@1,COG4292@2	NA|NA|NA	S	Bacterial low temperature requirement A protein (LtrA)
PAKBJLMI_00731	272621.LBA1077	4.4e-244	850.1	Lactobacillaceae	yrvN			ko:K07478					ko00000				Bacteria	1TPVV@1239,3F44J@33958,4HAIS@91061,COG2256@1,COG2256@2	NA|NA|NA	L	AAA C-terminal domain
PAKBJLMI_00732	272621.LBA1078	2.9e-195	687.6	Lactobacillaceae	cbh		3.5.1.24	ko:K01442	ko00120,ko00121,ko01100,map00120,map00121,map01100		R02797,R03975,R03977,R04486,R04487,R05835	RC00090,RC00096	ko00000,ko00001,ko01000				Bacteria	1TPZS@1239,3F4NH@33958,4HC4Y@91061,COG3049@1,COG3049@2	NA|NA|NA	M	Linear amide C-N hydrolase, choloylglycine hydrolase family protein
PAKBJLMI_00733	272621.LBA1079	7.7e-114	416.4	Lactobacillaceae													Bacteria	1U5N5@1239,3F67S@33958,4IFCV@91061,COG1376@1,COG1376@2	NA|NA|NA	S	L,D-transpeptidase catalytic domain
PAKBJLMI_00734	272621.LBA1080	4.7e-218	763.5	Lactobacillaceae			2.1.1.14	ko:K00549	ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230	M00017	R04405,R09365	RC00035,RC00113,RC01241	ko00000,ko00001,ko00002,ko01000				Bacteria	1TPDQ@1239,3F49P@33958,4HADW@91061,COG0620@1,COG0620@2	NA|NA|NA	E	methionine synthase, vitamin-B12 independent
PAKBJLMI_00735	272621.LBA1081	2.3e-89	334.7	Lactobacillaceae	luxS	GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0007154,GO:0007267,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009069,GO:0009086,GO:0009116,GO:0009119,GO:0009372,GO:0009987,GO:0010699,GO:0016053,GO:0016829,GO:0016846,GO:0017144,GO:0019284,GO:0019752,GO:0023052,GO:0033353,GO:0034641,GO:0042278,GO:0043094,GO:0043102,GO:0043436,GO:0043768,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044764,GO:0046128,GO:0046394,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0051186,GO:0051704,GO:0055086,GO:0071265,GO:0071267,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1901657	4.4.1.21	ko:K07173	ko00270,ko01100,ko01230,ko02024,ko02026,ko05111,map00270,map01100,map01230,map02024,map02026,map05111	M00609	R01291	RC00069,RC01929	ko00000,ko00001,ko00002,ko01000			iECIAI39_1322.ECIAI39_2877,iPC815.YPO3300	Bacteria	1V1CH@1239,3F4W2@33958,4HFPR@91061,COG1854@1,COG1854@2	NA|NA|NA	H	Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
PAKBJLMI_00736	272621.LBA1082	7.9e-67	260.4	Lactobacillaceae				ko:K02238		M00429			ko00000,ko00002,ko02044	3.A.11.1,3.A.11.2			Bacteria	1V8AM@1239,3F813@33958,4IPMQ@91061,COG1525@1,COG1525@2	NA|NA|NA	L	nuclease
PAKBJLMI_00737	272621.LBA1083	3.3e-155	554.3	Lactobacillaceae				ko:K15051					ko00000				Bacteria	1TR37@1239,3F4MB@33958,4HHHQ@91061,COG2169@1,COG2169@2	NA|NA|NA	F	DNA/RNA non-specific endonuclease
PAKBJLMI_00738	272621.LBA1084	4.3e-115	420.6	Lactobacillaceae	ywnB			ko:K07118					ko00000				Bacteria	1TZ3T@1239,3F5K7@33958,4HVUN@91061,COG2910@1,COG2910@2	NA|NA|NA	S	NAD(P)H-binding
PAKBJLMI_00739	272621.LBA1086	1.7e-238	831.6	Lactobacillaceae	steT	GO:0003333,GO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0006865,GO:0008150,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015179,GO:0015291,GO:0015297,GO:0015318,GO:0015711,GO:0015807,GO:0015849,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0046942,GO:0046943,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098656,GO:1902475,GO:1903825,GO:1905039		ko:K03294					ko00000	2.A.3.2			Bacteria	1TQ48@1239,3F3YJ@33958,4HBGT@91061,COG0531@1,COG0531@2	NA|NA|NA	E	amino acid
PAKBJLMI_00740	272621.LBA1087	4.4e-106	390.6	Lactobacillaceae	mccA	GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004122,GO:0004124,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006563,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008284,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0016829,GO:0016835,GO:0016836,GO:0016846,GO:0019344,GO:0019752,GO:0019842,GO:0030170,GO:0036094,GO:0042127,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0048037,GO:0048518,GO:0048522,GO:0050662,GO:0050789,GO:0050794,GO:0065007,GO:0070279,GO:0071704,GO:0080146,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	2.5.1.134,2.5.1.47	ko:K01738,ko:K17216	ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230	M00021,M00609	R00897,R03601,R04859,R10305	RC00020,RC00069,RC02814,RC02821	ko00000,ko00001,ko00002,ko01000			iSB619.SA_RS02385	Bacteria	1TP30@1239,3F4VD@33958,4HAMU@91061,COG0031@1,COG0031@2	NA|NA|NA	E	Belongs to the cysteine synthase cystathionine beta- synthase family
PAKBJLMI_00741	272621.LBA1089	2.4e-40	171.0	Lactobacillaceae	metC	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464	4.4.1.1,4.4.1.2,4.4.1.8	ko:K01760,ko:K17217	ko00260,ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00260,map00270,map00450,map00920,map01100,map01110,map01130,map01230	M00017,M00609	R00782,R01001,R01283,R01286,R02408,R04941	RC00056,RC00069,RC00348,RC00382,RC00487,RC00488,RC00710,RC01245,RC02303,RC02814	ko00000,ko00001,ko00002,ko01000				Bacteria	1TPC7@1239,3F3Y2@33958,4HAFQ@91061,COG0626@1,COG0626@2	NA|NA|NA	E	cystathionine
PAKBJLMI_00742	272621.LBA1090	2.2e-148	531.6	Lactobacillaceae	metC	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464	4.4.1.1,4.4.1.2,4.4.1.8	ko:K01760,ko:K17217	ko00260,ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00260,map00270,map00450,map00920,map01100,map01110,map01130,map01230	M00017,M00609	R00782,R01001,R01283,R01286,R02408,R04941	RC00056,RC00069,RC00348,RC00382,RC00487,RC00488,RC00710,RC01245,RC02303,RC02814	ko00000,ko00001,ko00002,ko01000				Bacteria	1TPC7@1239,3F3Y2@33958,4HAFQ@91061,COG0626@1,COG0626@2	NA|NA|NA	E	cystathionine
PAKBJLMI_00743	272621.LBA1092	0.0	1785.0	Bacteria	ppc	GO:0003674,GO:0003824,GO:0004611,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0008964,GO:0009060,GO:0009987,GO:0015980,GO:0016829,GO:0016830,GO:0016831,GO:0016999,GO:0017144,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045333,GO:0055114,GO:0071704,GO:0072350	4.1.1.31	ko:K01595	ko00620,ko00680,ko00710,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00710,map00720,map01100,map01120,map01200	M00168,M00170,M00171,M00172,M00173,M00346,M00374	R00345	RC02741	ko00000,ko00001,ko00002,ko01000			iJN678.ppc,iSFV_1184.SFV_4025	Bacteria	COG2352@1,COG2352@2	NA|NA|NA	C	phosphoenolpyruvate carboxylase activity
PAKBJLMI_00744	272621.LBA1093	0.0	2481.1	Lactobacillaceae													Bacteria	1TUPQ@1239,2C0IE@1,2Z7YA@2,3F4HC@33958,4IEVE@91061	NA|NA|NA		
PAKBJLMI_00745	272621.LBA1094	0.0	1330.1	Lactobacillaceae													Bacteria	1VQ4B@1239,2A8RI@1,30XU8@2,3F4H8@33958,4IJHJ@91061	NA|NA|NA		
PAKBJLMI_00746	272621.LBA1096	3.5e-174	617.5	Lactobacillaceae	yobV1												Bacteria	1TPS2@1239,3F56I@33958,4HDVX@91061,COG2378@1,COG2378@2	NA|NA|NA	K	WYL domain
PAKBJLMI_00747	272621.LBA1097	3.1e-83	314.3	Lactobacillaceae	XK26_02160												Bacteria	1U621@1239,3F6UR@33958,4IFR1@91061,COG5015@1,COG5015@2	NA|NA|NA	S	Pyridoxamine 5'-phosphate oxidase
PAKBJLMI_00748	272621.LBA1098	2.6e-146	524.6	Lactobacillaceae													Bacteria	1TRQC@1239,3F4FH@33958,4HD7P@91061,COG1028@1,COG1028@2	NA|NA|NA	IQ	reductase
PAKBJLMI_00749	272621.LBA1099	7.1e-55	219.5	Lactobacillaceae	ywnH	GO:0003674,GO:0003824,GO:0006464,GO:0006473,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016740,GO:0016746,GO:0016747,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0043543,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:1901564	2.3.1.183	ko:K03823	ko00440,ko01130,map00440,map01130		R08871,R08938	RC00004,RC00064	ko00000,ko00001,ko01000				Bacteria	1V3V3@1239,3F70T@33958,4HHNY@91061,COG1247@1,COG1247@2	NA|NA|NA	M	Acetyltransferase (GNAT) domain
PAKBJLMI_00750	272621.LBA1100	7.2e-115	419.9	Lactobacillaceae	tas												Bacteria	1TPIY@1239,3F6G1@33958,4HA4Q@91061,COG0667@1,COG0667@2	NA|NA|NA	C	Aldo/keto reductase family
PAKBJLMI_00751	272621.LBA1101	2.9e-60	237.7	Firmicutes													Bacteria	1TPIY@1239,COG0667@1,COG0667@2	NA|NA|NA	C	aldo keto reductase
PAKBJLMI_00752	272621.LBA1102	3.6e-146	524.2	Lactobacillaceae	glcU			ko:K05340					ko00000,ko02000	2.A.7.5			Bacteria	1UBJV@1239,3FB9E@33958,4HB7E@91061,COG4975@1,COG4975@2	NA|NA|NA	U	ribose uptake protein RbsU
PAKBJLMI_00753	891391.LAC30SC_05045	1e-20	105.9	Lactobacillaceae													Bacteria	1V465@1239,3F7H7@33958,4HN5X@91061,COG0716@1,COG0716@2	NA|NA|NA	C	Flavodoxin
PAKBJLMI_00755	272621.LBA1105	2.7e-98	364.8	Lactobacillaceae	fldA												Bacteria	1V45R@1239,3F7P2@33958,4HQY8@91061,COG0716@1,COG0716@2	NA|NA|NA	C	Flavodoxin
PAKBJLMI_00756	272621.LBA1106	7.7e-100	369.8	Lactobacillaceae				ko:K07017					ko00000				Bacteria	1UZN7@1239,3F83X@33958,4HFJ5@91061,COG2382@1,COG2382@2	NA|NA|NA	P	esterase
PAKBJLMI_00757	272621.LBA1107	2.4e-261	907.5	Lactobacillaceae	gor		1.8.1.7	ko:K00383	ko00480,ko04918,map00480,map04918		R00094,R00115	RC00011	ko00000,ko00001,ko01000				Bacteria	1TS0Z@1239,3F3K2@33958,4HBYB@91061,COG1249@1,COG1249@2	NA|NA|NA	C	Glutathione reductase
PAKBJLMI_00758	272621.LBA1108	4.1e-23	113.2	Lactobacillaceae													Bacteria	1U891@1239,29QKC@1,30BK0@2,3FAQ2@33958,4II6W@91061	NA|NA|NA		
PAKBJLMI_00759	272621.LBA1109	4.2e-141	507.3	Lactobacillaceae	fldA												Bacteria	1V45R@1239,3F7P2@33958,4HQY8@91061,COG0716@1,COG0716@2	NA|NA|NA	C	Flavodoxin
PAKBJLMI_00760	272621.LBA1110	7.8e-97	359.8	Lactobacillaceae				ko:K07038					ko00000				Bacteria	1TV5H@1239,3F689@33958,4ICPV@91061,COG1988@1,COG1988@2	NA|NA|NA	S	LexA-binding, inner membrane-associated putative hydrolase
PAKBJLMI_00761	1423754.BALY01000018_gene322	2.3e-14	85.1	Lactobacillaceae													Bacteria	1V45R@1239,3F7P2@33958,4HQY8@91061,COG0716@1,COG0716@2	NA|NA|NA	C	Flavodoxin
PAKBJLMI_00762	272621.LBA1113	2.6e-149	534.6	Lactobacillaceae													Bacteria	1U5C7@1239,3F5HV@33958,4IF3F@91061,COG4097@1,COG4097@2	NA|NA|NA	P	FAD-binding domain
PAKBJLMI_00763	272621.LBA1114	3.3e-77	294.3	Lactobacillaceae	adh		1.1.1.1,1.1.1.14	ko:K00001,ko:K00008	ko00010,ko00040,ko00051,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00040,map00051,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220	M00014	R00623,R00754,R00875,R01896,R02124,R04805,R04880,R05233,R05234,R06917,R06927,R07105,R08281,R08306,R08310	RC00050,RC00085,RC00087,RC00088,RC00099,RC00102,RC00116,RC00649,RC01734,RC02273	ko00000,ko00001,ko00002,ko01000				Bacteria	1TPIW@1239,3F42F@33958,4HB2G@91061,COG1063@1,COG1063@2	NA|NA|NA	E	alcohol dehydrogenase
PAKBJLMI_00765	272621.LBA1115	3e-251	874.0	Lactobacillaceae	yagE												Bacteria	1VTJD@1239,3FCAN@33958,4HTQM@91061,COG0531@1,COG0531@2	NA|NA|NA	E	amino acid
PAKBJLMI_00766	557436.Lreu_1841	1.3e-12	79.3	Lactobacillaceae													Bacteria	1VSYU@1239,3F4J2@33958,4HU15@91061,COG4814@1,COG4814@2	NA|NA|NA	S	Alpha beta hydrolase
PAKBJLMI_00767	272621.LBA1116	5e-44	183.3	Lactobacillaceae	proC	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464	1.5.1.2	ko:K00286	ko00330,ko01100,ko01110,ko01130,ko01230,map00330,map01100,map01110,map01130,map01230	M00015	R01248,R01251,R03291,R03293	RC00054,RC00083	ko00000,ko00001,ko00002,ko01000			iAF987.Gmet_0899,iIT341.HP1158	Bacteria	1TP1E@1239,3F4SE@33958,4H9RV@91061,COG0345@1,COG0345@2	NA|NA|NA	E	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
PAKBJLMI_00768	1423748.BALB01000031_gene1919	9.2e-17	92.8	Lactobacillaceae	proC	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464	1.5.1.2	ko:K00286	ko00330,ko01100,ko01110,ko01130,ko01230,map00330,map01100,map01110,map01130,map01230	M00015	R01248,R01251,R03291,R03293	RC00054,RC00083	ko00000,ko00001,ko00002,ko01000			iAF987.Gmet_0899,iIT341.HP1158	Bacteria	1TP1E@1239,3F4SE@33958,4H9RV@91061,COG0345@1,COG0345@2	NA|NA|NA	E	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
PAKBJLMI_00769	1423767.BALU01000003_gene1102	2.2e-18	97.8	Lactobacillaceae	magIII			ko:K07457					ko00000				Bacteria	1V4SG@1239,3F62T@33958,4HI5U@91061,COG2231@1,COG2231@2	NA|NA|NA	L	Base excision DNA repair protein, HhH-GPD family
PAKBJLMI_00770	272621.LBA1119	1.9e-168	598.6	Lactobacillaceae	MA20_14895												Bacteria	1TQYA@1239,3F4TY@33958,4HCCP@91061,COG2855@1,COG2855@2	NA|NA|NA	S	Conserved hypothetical protein 698
PAKBJLMI_00771	272621.LBA1120	7e-101	373.2	Lactobacillaceae													Bacteria	1U67D@1239,29P6U@1,30A4Y@2,3F78T@33958,4IFXW@91061	NA|NA|NA		
PAKBJLMI_00772	272621.LBA1121	1.3e-108	399.1	Lactobacillaceae	plsY	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944	2.3.1.15,3.5.1.104	ko:K08591,ko:K22278	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	M00089	R00851,R09380	RC00004,RC00039,RC00041	ko00000,ko00001,ko00002,ko01000,ko01004				Bacteria	1VA3J@1239,3F543@33958,4HC55@91061,COG0344@1,COG0344@2	NA|NA|NA	I	Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
PAKBJLMI_00773	272621.LBA1122	0.0	1216.4	Lactobacillaceae	parE	GO:0003674,GO:0003824,GO:0003916,GO:0003918,GO:0005575,GO:0006139,GO:0006259,GO:0006265,GO:0006725,GO:0006807,GO:0006996,GO:0007059,GO:0008094,GO:0008150,GO:0008152,GO:0009295,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016887,GO:0017111,GO:0034335,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0051276,GO:0061505,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360	5.99.1.3	ko:K02470,ko:K02622					ko00000,ko01000,ko02048,ko03032,ko03036,ko03400				Bacteria	1TQCF@1239,3F430@33958,4H9UC@91061,COG0187@1,COG0187@2	NA|NA|NA	L	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PAKBJLMI_00774	272621.LBA1123	0.0	1589.3	Lactobacillaceae	parC	GO:0005575,GO:0005622,GO:0005623,GO:0009330,GO:0032991,GO:0044424,GO:0044464	5.99.1.3	ko:K02469,ko:K02621					ko00000,ko01000,ko02048,ko03032,ko03036,ko03400				Bacteria	1TRE7@1239,3F3MJ@33958,4HAQB@91061,COG0188@1,COG0188@2	NA|NA|NA	L	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PAKBJLMI_00775	272621.LBA1124	6.6e-184	649.8	Lactobacillaceae													Bacteria	1UYS5@1239,3F48B@33958,4HF07@91061,COG0583@1,COG0583@2	NA|NA|NA	K	Transcriptional regulator
PAKBJLMI_00776	272621.LBA1125	2.3e-173	614.8	Lactobacillaceae	ppaC	GO:0003674,GO:0003824,GO:0004427,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006793,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0044237,GO:0044424,GO:0044464	3.6.1.1	ko:K15986	ko00190,map00190				ko00000,ko00001,ko01000				Bacteria	1TPH6@1239,3F3PJ@33958,4H9T8@91061,COG1227@1,COG1227@2	NA|NA|NA	C	inorganic pyrophosphatase
PAKBJLMI_00777	272621.LBA1126	1.7e-113	415.2	Lactobacillaceae	ppiB	GO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:0140096,GO:1901564	5.2.1.8	ko:K01802,ko:K03768					ko00000,ko01000,ko03110				Bacteria	1TRHW@1239,3F3TI@33958,4H9V0@91061,COG0652@1,COG0652@2	NA|NA|NA	G	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PAKBJLMI_00778	272621.LBA1127	1.2e-39	168.7	Lactobacillaceae													Bacteria	1UUUD@1239,3F8QF@33958,4I3X4@91061,COG1396@1,COG1396@2	NA|NA|NA	K	Helix-turn-helix domain
PAKBJLMI_00779	272621.LBA1128	1.1e-127	462.6	Lactobacillaceae	yoaK												Bacteria	1V1VQ@1239,3F5F5@33958,4HM4F@91061,COG3619@1,COG3619@2	NA|NA|NA	S	Protein of unknown function (DUF1275)
PAKBJLMI_00780	272621.LBA1129	8.2e-66	256.1	Lactobacillaceae	fic			ko:K04095					ko00000,ko03036				Bacteria	1TPUZ@1239,3FBK2@33958,4HIQT@91061,COG2184@1,COG2184@2	NA|NA|NA	D	Fic/DOC family
PAKBJLMI_00782	272621.LBA1131	1.5e-286	991.5	Lactobacillaceae													Bacteria	1TSRV@1239,3F46B@33958,4HCIZ@91061,COG1132@1,COG1132@2	NA|NA|NA	V	ABC-type multidrug transport system, ATPase and permease components
PAKBJLMI_00783	272621.LBA1132	2.3e-287	994.2	Lactobacillaceae													Bacteria	1TSRV@1239,3F46B@33958,4HCIZ@91061,COG1132@1,COG1132@2	NA|NA|NA	V	ABC-type multidrug transport system, ATPase and permease components
PAKBJLMI_00784	272621.LBA1135	1e-213	749.2	Lactobacillaceae													Bacteria	1UI2A@1239,3FBUA@33958,4IT3G@91061,COG0477@1,COG2814@2	NA|NA|NA	EGP	Transmembrane secretion effector
PAKBJLMI_00785	272621.LBA1136	3.9e-84	317.4	Lactobacillaceae													Bacteria	1VN97@1239,3F7HA@33958,4HR2T@91061,COG1846@1,COG1846@2	NA|NA|NA	K	transcriptional
PAKBJLMI_00786	272621.LBA1137	3.3e-58	230.7	Lactobacillaceae	azoR	GO:0003674,GO:0003824,GO:0006082,GO:0006629,GO:0006631,GO:0008081,GO:0008150,GO:0008152,GO:0008770,GO:0009987,GO:0016787,GO:0016788,GO:0019752,GO:0032787,GO:0042578,GO:0043436,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0071704,GO:0140096		ko:K01118					ko00000,ko01000				Bacteria	1V2AQ@1239,3F580@33958,4HGK5@91061,COG1182@1,COG1182@2	NA|NA|NA	C	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
PAKBJLMI_00788	272621.LBA1140	4.3e-200	703.7	Lactobacillaceae				ko:K07273					ko00000				Bacteria	1VF8D@1239,3F4U9@33958,4HX0U@91061,COG3757@1,COG3757@2	NA|NA|NA	M	Glycosyl hydrolases family 25
PAKBJLMI_00789	272621.LBA1142	2.4e-107	394.8	Lactobacillaceae	XK27_00160												Bacteria	1V5Q4@1239,29N5D@1,30939@2,3F5S8@33958,4HHUF@91061	NA|NA|NA	S	Domain of unknown function (DUF5052)
PAKBJLMI_00790	272621.LBA1143	1.5e-91	342.0	Lactobacillaceae	adk		2.7.4.3	ko:K00939	ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130	M00049	R00127,R01547,R11319	RC00002	ko00000,ko00001,ko00002,ko01000,ko04147				Bacteria	1V7AW@1239,3F6PA@33958,4HH8A@91061,COG0563@1,COG0563@2	NA|NA|NA	F	topology modulation protein
PAKBJLMI_00791	272621.LBA1144	3.1e-59	234.6	Lactobacillaceae													Bacteria	1U5N3@1239,29EME@1,301JC@2,3F67R@33958,4IFCU@91061	NA|NA|NA		
PAKBJLMI_00792	272621.LBA1145	8.4e-196	689.5	Lactobacillaceae	xerS	GO:0000150,GO:0003674,GO:0003824,GO:0006139,GO:0006259,GO:0006310,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008907,GO:0009009,GO:0009037,GO:0009987,GO:0015074,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0140097,GO:1901360		ko:K04763					ko00000,ko03036				Bacteria	1TPQB@1239,3F3P9@33958,4HANE@91061,COG4974@1,COG4974@2	NA|NA|NA	L	Belongs to the 'phage' integrase family
PAKBJLMI_00793	272621.LBA1146	2e-55	221.5	Lactobacillaceae	degV												Bacteria	1TRM7@1239,3F40W@33958,4HBIR@91061,COG1307@1,COG1307@2	NA|NA|NA	S	EDD domain protein, DegV family
PAKBJLMI_00794	272621.LBA1146	2.3e-81	308.1	Lactobacillaceae	degV												Bacteria	1TRM7@1239,3F40W@33958,4HBIR@91061,COG1307@1,COG1307@2	NA|NA|NA	S	EDD domain protein, DegV family
PAKBJLMI_00795	272621.LBA1147	9e-66	256.1	Lactobacillaceae													Bacteria	1U6A0@1239,29P8Y@1,30A72@2,3F7ER@33958,4IG18@91061	NA|NA|NA		
PAKBJLMI_00796	272621.LBA1148	0.0	1114.4	Lactobacillaceae	FbpA			ko:K12341	ko03070,map03070				ko00000,ko00001,ko02044	1.B.40.1.1			Bacteria	1TQ8A@1239,3F3PS@33958,4H9UF@91061,COG1293@1,COG1293@2	NA|NA|NA	K	Fibronectin-binding protein
PAKBJLMI_00797	272621.LBA1149	0.0	2083.5	Lactobacillaceae	carB1		6.3.5.5	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	M00051	R00256,R00575,R01395,R10948,R10949	RC00002,RC00010,RC00043,RC02750,RC02798,RC03314	ko00000,ko00001,ko00002,ko01000				Bacteria	1TPID@1239,3F3MD@33958,4HAEY@91061,COG0458@1,COG0458@2	NA|NA|NA	F	Carbamoyl-phosphate synthase
PAKBJLMI_00798	272621.LBA1150	3e-198	697.6	Lactobacillaceae	carA	GO:0000050,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005951,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0019627,GO:0019752,GO:0032991,GO:0034641,GO:0040007,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494	6.3.5.5	ko:K01955,ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	M00051	R00256,R00575,R01395,R10948,R10949	RC00002,RC00010,RC00043,RC02750,RC02798,RC03314	ko00000,ko00001,ko00002,ko01000			iNJ661.Rv1383,iYO844.BSU15510	Bacteria	1TQ8N@1239,3F43R@33958,4H9Z0@91061,COG0505@1,COG0505@2	NA|NA|NA	F	Carbamoyl-phosphate synthetase glutamine chain
PAKBJLMI_00799	272621.LBA1151	3.2e-172	610.9	Lactobacillaceae	rluD	GO:0000027,GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022607,GO:0022613,GO:0022618,GO:0031118,GO:0034470,GO:0034622,GO:0034641,GO:0034660,GO:0042254,GO:0042255,GO:0042273,GO:0043170,GO:0043412,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:1901360	5.4.99.23	ko:K06180					ko00000,ko01000,ko03009			iE2348C_1286.E2348C_2868,iECED1_1282.ECED1_3035,iECSF_1327.ECSF_2432	Bacteria	1TPCM@1239,3F3P6@33958,4HBG2@91061,COG0564@1,COG0564@2	NA|NA|NA	J	Responsible for synthesis of pseudouridine from uracil
PAKBJLMI_00800	272621.LBA1152	3.6e-79	300.8	Lactobacillaceae	lspA		3.4.23.36	ko:K03101	ko03060,map03060				ko00000,ko00001,ko01000,ko01002				Bacteria	1VA9R@1239,3F66R@33958,4HIR4@91061,COG0597@1,COG0597@2	NA|NA|NA	MU	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
PAKBJLMI_00801	272621.LBA1153	0.0	1094.3	Lactobacillaceae	fhs		6.3.4.3	ko:K01938	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	M00140,M00377	R00943	RC00026,RC00111	ko00000,ko00001,ko00002,ko01000				Bacteria	1TP6N@1239,3F3U6@33958,4HA2X@91061,COG2759@1,COG2759@2	NA|NA|NA	F	Belongs to the formate--tetrahydrofolate ligase family
PAKBJLMI_00802	272621.LBA1154	7.2e-244	849.4	Lactobacillaceae	cpdA												Bacteria	1UQCQ@1239,3F483@33958,4HG8Z@91061,COG1409@1,COG1409@2	NA|NA|NA	S	Calcineurin-like phosphoesterase
PAKBJLMI_00803	272621.LBA1155	1.8e-217	761.5	Lactobacillaceae	rlmL	GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0008990,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016423,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360	2.1.1.173,2.1.1.264	ko:K07444,ko:K12297			R07234	RC00003	ko00000,ko01000,ko03009				Bacteria	1TP0X@1239,3F3NZ@33958,4HBKY@91061,COG0116@1,COG0116@2	NA|NA|NA	L	Belongs to the methyltransferase superfamily
PAKBJLMI_00804	272621.LBA1156	6.7e-69	266.5	Lactobacillaceae	gpsB			ko:K04074					ko00000,ko03036				Bacteria	1VEQ4@1239,3F6VZ@33958,4HNP1@91061,COG3599@1,COG3599@2	NA|NA|NA	D	Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
PAKBJLMI_00805	272621.LBA1157	9.4e-106	389.4	Lactobacillaceae	ypsA												Bacteria	1V6SM@1239,3F4MR@33958,4HJGM@91061,COG4474@1,COG4474@2	NA|NA|NA	S	Belongs to the UPF0398 family
PAKBJLMI_00806	272621.LBA1158	7.8e-117	426.4	Lactobacillaceae	recU	GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360		ko:K03700					ko00000,ko03400				Bacteria	1V3S4@1239,3F4DG@33958,4HGZ7@91061,COG3331@1,COG3331@2	NA|NA|NA	L	Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
PAKBJLMI_00807	272621.LBA1159	0.0	1352.8	Lactobacillaceae	ponA	GO:0005575,GO:0005576	2.4.1.129,3.4.16.4	ko:K05365,ko:K05366,ko:K12555,ko:K21464	ko00550,ko01100,ko01501,map00550,map01100,map01501		R04519	RC00005,RC00049	ko00000,ko00001,ko01000,ko01003,ko01011		GT51		Bacteria	1TPM5@1239,3F424@33958,4H9SA@91061,COG0744@1,COG0744@2	NA|NA|NA	M	penicillin-binding protein 1A
PAKBJLMI_00808	272621.LBA1160	1.5e-115	422.2	Lactobacillaceae	nth		4.2.99.18	ko:K10773	ko03410,map03410				ko00000,ko00001,ko01000,ko03400				Bacteria	1TRAK@1239,3F42U@33958,4HATD@91061,COG0177@1,COG0177@2	NA|NA|NA	L	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
PAKBJLMI_00809	272621.LBA1161	5.7e-115	420.2	Lactobacillaceae	dnaD			ko:K02086					ko00000				Bacteria	1V283@1239,3F4FF@33958,4HFP3@91061,COG3935@1,COG3935@2	NA|NA|NA	L	DnaD domain protein
PAKBJLMI_00810	525365.HMPREF0548_0040	2.4e-253	880.9	Lactobacillaceae	asnS	GO:0003674,GO:0003824,GO:0004812,GO:0004816,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006421,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576	6.1.1.22	ko:K01893	ko00970,map00970	M00359,M00360	R03648	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016				Bacteria	1TP38@1239,3F4EK@33958,4H9YH@91061,COG0017@1,COG0017@2	NA|NA|NA	J	Asparaginyl-tRNA synthetase
PAKBJLMI_00811	272621.LBA1163	1.4e-89	335.5	Lactobacillaceae	ypmB												Bacteria	1VA2H@1239,3F4MM@33958,4HNMM@91061,COG5353@1,COG5353@2	NA|NA|NA	S	Protein conserved in bacteria
PAKBJLMI_00812	272621.LBA1164	8.5e-229	799.3	Lactobacillaceae	dinG	GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008408,GO:0009058,GO:0009059,GO:0009360,GO:0009987,GO:0016020,GO:0016787,GO:0016788,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0042575,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0044776,GO:0045004,GO:0045005,GO:0046483,GO:0050896,GO:0051716,GO:0061695,GO:0071704,GO:0071944,GO:0090304,GO:0090305,GO:1901360,GO:1901576,GO:1902494,GO:1990234	2.7.7.7,3.6.4.12	ko:K02342,ko:K03722	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400				Bacteria	1TQHQ@1239,3F4KA@33958,4HB2Y@91061,COG0847@1,COG0847@2,COG1199@1,COG1199@2	NA|NA|NA	L	helicase involved in DNA repair and perhaps also replication
PAKBJLMI_00813	272621.LBA1164	2.2e-301	1040.8	Lactobacillaceae	dinG	GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008408,GO:0009058,GO:0009059,GO:0009360,GO:0009987,GO:0016020,GO:0016787,GO:0016788,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0042575,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0044776,GO:0045004,GO:0045005,GO:0046483,GO:0050896,GO:0051716,GO:0061695,GO:0071704,GO:0071944,GO:0090304,GO:0090305,GO:1901360,GO:1901576,GO:1902494,GO:1990234	2.7.7.7,3.6.4.12	ko:K02342,ko:K03722	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400				Bacteria	1TQHQ@1239,3F4KA@33958,4HB2Y@91061,COG0847@1,COG0847@2,COG1199@1,COG1199@2	NA|NA|NA	L	helicase involved in DNA repair and perhaps also replication
PAKBJLMI_00814	272621.LBA1165	0.0	2343.9	Lactobacillaceae	addA		3.6.4.12	ko:K16898					ko00000,ko01000,ko03400				Bacteria	1TQ35@1239,3F3Z0@33958,4HA64@91061,COG1074@1,COG1074@2	NA|NA|NA	L	ATP-dependent helicase nuclease subunit A
PAKBJLMI_00815	272621.LBA1166	0.0	2237.6	Lactobacillaceae	rexB	GO:0003674,GO:0003678,GO:0003824,GO:0004003,GO:0004386,GO:0004518,GO:0004519,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016788,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032392,GO:0032508,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051276,GO:0051716,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0140097,GO:1901360	3.1.21.3,3.6.4.12	ko:K01153,ko:K16899					ko00000,ko01000,ko02048,ko03400				Bacteria	1TQJW@1239,3FCA9@33958,4HK67@91061,COG3857@1,COG3857@2	NA|NA|NA	L	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
PAKBJLMI_00816	272621.LBA1167	6.6e-170	603.2	Lactobacillaceae	mvk		1.1.1.88,2.3.3.10,2.7.1.36	ko:K00054,ko:K00869,ko:K01641	ko00072,ko00280,ko00650,ko00900,ko01100,ko01110,ko01130,ko04146,map00072,map00280,map00650,map00900,map01100,map01110,map01130,map04146	M00088,M00095	R01978,R02081,R02245	RC00002,RC00004,RC00017,RC00503,RC00644	ko00000,ko00001,ko00002,ko01000				Bacteria	1UFCB@1239,3FBNI@33958,4HG49@91061,COG1577@1,COG1577@2	NA|NA|NA	I	GHMP kinases N terminal domain
PAKBJLMI_00817	272621.LBA1168	4.1e-178	630.6	Lactobacillaceae	mvaD		4.1.1.33	ko:K01597	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	M00095	R01121	RC00453	ko00000,ko00001,ko00002,ko01000				Bacteria	1TQXR@1239,3F4B5@33958,4HAM6@91061,COG3407@1,COG3407@2	NA|NA|NA	I	diphosphomevalonate decarboxylase
PAKBJLMI_00818	272621.LBA1169	8.4e-204	716.1	Lactobacillaceae	mvaK2		2.7.1.36,2.7.1.43,2.7.4.2	ko:K00869,ko:K00938,ko:K16190	ko00040,ko00053,ko00520,ko00900,ko01100,ko01110,ko01130,ko04146,map00040,map00053,map00520,map00900,map01100,map01110,map01130,map04146	M00014,M00095	R01476,R02245,R03245	RC00002,RC00017,RC00078	ko00000,ko00001,ko00002,ko01000				Bacteria	1TPKP@1239,3F3RZ@33958,4HC93@91061,COG1577@1,COG1577@2	NA|NA|NA	I	phosphomevalonate kinase
PAKBJLMI_00819	272621.LBA1171	4.2e-189	667.2	Lactobacillaceae	fni		1.1.1.88,5.3.3.2	ko:K00054,ko:K01823	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	M00095,M00096,M00364,M00365,M00366,M00367	R01123,R02081	RC00004,RC00455,RC00644	ko00000,ko00001,ko00002,ko01000				Bacteria	1TQZ3@1239,3F3UY@33958,4HAMV@91061,COG1304@1,COG1304@2	NA|NA|NA	C	Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
PAKBJLMI_00820	272621.LBA1172	5.2e-145	520.4	Lactobacillaceae				ko:K03481					ko00000,ko03000				Bacteria	1UYAM@1239,3FC4F@33958,4HVUK@91061,COG1737@1,COG1737@2	NA|NA|NA	K	SIS domain
PAKBJLMI_00821	272621.LBA1174	3.2e-83	314.3	Lactobacillaceae	rpiA	GO:0003674,GO:0003824,GO:0004751,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006014,GO:0006081,GO:0006098,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009052,GO:0009117,GO:0009987,GO:0016853,GO:0016860,GO:0016861,GO:0019321,GO:0019362,GO:0019637,GO:0019682,GO:0019693,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046496,GO:0051156,GO:0051186,GO:0055086,GO:0071704,GO:0072524,GO:1901135,GO:1901360,GO:1901564	5.3.1.6	ko:K01807	ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230	M00004,M00007,M00165,M00167,M00580	R01056	RC00434	ko00000,ko00001,ko00002,ko01000			iJN678.rpiA	Bacteria	1W0HS@1239,3F757@33958,4HZEY@91061,COG0120@1,COG0120@2	NA|NA|NA	G	Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
PAKBJLMI_00822	272621.LBA1175	1.3e-107	395.6	Lactobacillaceae	XK27_10475												Bacteria	1TPT5@1239,3F4XH@33958,4HAPJ@91061,COG0673@1,COG0673@2	NA|NA|NA	S	Oxidoreductase family, NAD-binding Rossmann fold
PAKBJLMI_00823	272621.LBA1176	4.4e-55	220.3	Lactobacillaceae	XK27_10475												Bacteria	1TPT5@1239,3F4XH@33958,4HAPJ@91061,COG0673@1,COG0673@2	NA|NA|NA	S	Oxidoreductase family, NAD-binding Rossmann fold
PAKBJLMI_00824	272621.LBA1177	4.6e-216	756.9	Lactobacillaceae	iscS		2.8.1.7	ko:K04487	ko00730,ko01100,ko04122,map00730,map01100,map04122		R07460,R11528,R11529	RC01789,RC02313	ko00000,ko00001,ko01000,ko02048,ko03016,ko03029				Bacteria	1TP21@1239,3F3RF@33958,4HA6H@91061,COG1104@1,COG1104@2	NA|NA|NA	E	Aminotransferase class V
PAKBJLMI_00825	272621.LBA1178	1.1e-267	928.7	Lactobacillaceae	rsmF		2.1.1.176	ko:K03500					ko00000,ko01000,ko03009				Bacteria	1TPGQ@1239,3F492@33958,4HCHQ@91061,COG0144@1,COG0144@2	NA|NA|NA	J	NOL1 NOP2 sun family protein
PAKBJLMI_00826	272621.LBA1180	3.8e-179	634.0	Lactobacillaceae													Bacteria	1VNCY@1239,2EPHD@1,33H40@2,3F495@33958,4HYY7@91061	NA|NA|NA		
PAKBJLMI_00827	272621.LBA1181	4.1e-141	507.3	Lactobacillaceae													Bacteria	1VQQ8@1239,2E39Q@1,32Y99@2,3F4UX@33958,4HRY1@91061	NA|NA|NA		
PAKBJLMI_00828	1033837.WANG_0501	8.9e-96	356.3	Lactobacillaceae	lepB		3.4.21.89	ko:K03100	ko02024,ko03060,map02024,map03060				ko00000,ko00001,ko01000,ko01002				Bacteria	1V7H9@1239,3F4SM@33958,4HIQ4@91061,COG0681@1,COG0681@2	NA|NA|NA	U	Belongs to the peptidase S26 family
PAKBJLMI_00829	272621.LBA1183	2.2e-27	127.5	Lactobacillaceae													Bacteria	1U6MC@1239,29PI4@1,30AG9@2,3F858@33958,4IGE7@91061	NA|NA|NA		
PAKBJLMI_00830	272621.LBA1184	6.8e-131	473.4	Lactobacillaceae													Bacteria	1U58N@1239,2DKIE@1,309JQ@2,3F55M@33958,4IEZY@91061	NA|NA|NA		
PAKBJLMI_00831	272621.LBA1186	4e-145	520.8	Lactobacillaceae													Bacteria	1UG47@1239,29NT4@1,30GID@2,3F5H9@33958,4IF33@91061	NA|NA|NA		
PAKBJLMI_00832	272621.LBA1187	3.9e-132	477.6	Lactobacillaceae													Bacteria	1U5IX@1239,29NT4@1,309R6@2,3F624@33958,4HZ1H@91061	NA|NA|NA		
PAKBJLMI_00833	272621.LBA1188	1.1e-122	446.0	Lactobacillaceae	skfE			ko:K01990		M00254			ko00000,ko00002,ko02000	3.A.1			Bacteria	1TPUP@1239,3F4GA@33958,4HG6U@91061,COG1131@1,COG1131@2	NA|NA|NA	V	ATPases associated with a variety of cellular activities
PAKBJLMI_00834	272621.LBA1189	8e-61	239.6	Lactobacillaceae	yvoA_1			ko:K07979					ko00000,ko03000				Bacteria	1VA2B@1239,3F6GC@33958,4HPK4@91061,COG1725@1,COG1725@2	NA|NA|NA	K	Transcriptional regulator, GntR family
PAKBJLMI_00835	272621.LBA1190	1.3e-245	855.1	Lactobacillaceae	pepT	GO:0003674,GO:0003824,GO:0004177,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0009987,GO:0016787,GO:0019538,GO:0034641,GO:0034701,GO:0043170,GO:0043603,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0045148,GO:0070011,GO:0071704,GO:0140096,GO:1901564	3.4.11.4	ko:K01258					ko00000,ko01000,ko01002				Bacteria	1TP3A@1239,3F45V@33958,4HAZE@91061,COG2195@1,COG2195@2	NA|NA|NA	E	Cleaves the N-terminal amino acid of tripeptides
PAKBJLMI_00836	272621.LBA1191	7.7e-154	549.7	Lactobacillaceae	yqfO	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464	3.5.4.16	ko:K22391	ko00790,ko01100,map00790,map01100	M00126	R00428,R04639,R05046,R05048	RC00263,RC00294,RC00323,RC00945,RC01188	ko00000,ko00001,ko00002,ko01000				Bacteria	1TQ27@1239,3F3ZD@33958,4H9NY@91061,COG0327@1,COG0327@2	NA|NA|NA	S	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
PAKBJLMI_00837	272621.LBA1192	1.3e-125	455.7	Lactobacillaceae	trmK	GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016426,GO:0016429,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360	2.1.1.217	ko:K06967					ko00000,ko01000,ko03016				Bacteria	1V3I4@1239,3F4GT@33958,4HHIM@91061,COG2384@1,COG2384@2	NA|NA|NA	S	SAM-dependent methyltransferase
PAKBJLMI_00838	272621.LBA1193	5.6e-82	310.1	Lactobacillaceae	mutT		3.6.1.55	ko:K03574					ko00000,ko01000,ko03400				Bacteria	1V6PF@1239,3F66W@33958,4HKTF@91061,COG1051@1,COG1051@2	NA|NA|NA	F	NUDIX domain
PAKBJLMI_00839	272621.LBA1194	1.1e-126	459.1	Lactobacillaceae													Bacteria	1UI90@1239,2DVJ8@1,33W59@2,3F3K4@33958,4HD3X@91061	NA|NA|NA	S	Peptidase family M23
PAKBJLMI_00840	748671.LCRIS_01196	1.4e-198	698.7	Lactobacillaceae	sigA	GO:0000988,GO:0000990,GO:0001098,GO:0001101,GO:0001108,GO:0001666,GO:0002791,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006355,GO:0006950,GO:0008150,GO:0009266,GO:0009405,GO:0009408,GO:0009410,GO:0009415,GO:0009628,GO:0009889,GO:0009891,GO:0009893,GO:0010035,GO:0010468,GO:0010556,GO:0010557,GO:0010565,GO:0010604,GO:0010628,GO:0016020,GO:0016987,GO:0019216,GO:0019217,GO:0019219,GO:0019222,GO:0019899,GO:0030312,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032879,GO:0032880,GO:0036293,GO:0040007,GO:0042221,GO:0043175,GO:0043254,GO:0044087,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050708,GO:0050789,GO:0050794,GO:0050896,GO:0051046,GO:0051049,GO:0051128,GO:0051171,GO:0051173,GO:0051223,GO:0051252,GO:0051254,GO:0051704,GO:0060255,GO:0062012,GO:0065007,GO:0070063,GO:0070201,GO:0070482,GO:0071944,GO:0080090,GO:0090087,GO:0097159,GO:0140110,GO:1901363,GO:1901700,GO:1902680,GO:1903506,GO:1903508,GO:1903530,GO:2000112,GO:2000142,GO:2001141		ko:K03086,ko:K03087	ko02026,ko05111,map02026,map05111				ko00000,ko00001,ko03021				Bacteria	1TPD6@1239,3F4CF@33958,4HB1H@91061,COG0568@1,COG0568@2	NA|NA|NA	K	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
PAKBJLMI_00841	272621.LBA1197	0.0	1230.3	Lactobacillaceae	dnaG			ko:K02316	ko03030,map03030				ko00000,ko00001,ko01000,ko03032				Bacteria	1TQ0X@1239,3F3N1@33958,4HAG2@91061,COG0358@1,COG0358@2	NA|NA|NA	L	RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
PAKBJLMI_00842	272621.LBA1198	0.0	1322.0	Lactobacillaceae	glyS	GO:0003674,GO:0003824,GO:0004812,GO:0004820,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006426,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046983,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576	6.1.1.14	ko:K01879,ko:K14164	ko00970,map00970	M00360	R03654	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016			iAPECO1_1312.APECO1_2891,iE2348C_1286.E2348C_3810,iECABU_c1320.ECABU_c40010,iECED1_1282.ECED1_4242,iECH74115_1262.ECH74115_4934,iECNA114_1301.ECNA114_3710,iECOK1_1307.ECOK1_4005,iECP_1309.ECP_3661,iECS88_1305.ECS88_3976,iECSF_1327.ECSF_3393,iECSP_1301.ECSP_4554,iECs_1301.ECs4442,iG2583_1286.G2583_4300,iJN678.glyS,iUMN146_1321.UM146_17960,iUTI89_1310.UTI89_C4099,ic_1306.c4378	Bacteria	1TNZ7@1239,3F4G8@33958,4H9NT@91061,COG0751@1,COG0751@2	NA|NA|NA	J	Glycyl-tRNA synthetase beta subunit
PAKBJLMI_00843	272621.LBA1199	2.3e-178	631.3	Lactobacillaceae	glyQ	GO:0003674,GO:0003824,GO:0004812,GO:0004820,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016874,GO:0016875,GO:0044424,GO:0044444,GO:0044464,GO:0046983,GO:0140098,GO:0140101	6.1.1.14	ko:K01878,ko:K14164	ko00970,map00970	M00360	R03654	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016			iAF1260.b3560,iAF987.Gmet_2942,iJO1366.b3560,iPC815.YPO4072,iY75_1357.Y75_RS19360	Bacteria	1TPW8@1239,3F3T8@33958,4HBCF@91061,COG0752@1,COG0752@2	NA|NA|NA	J	glycyl-tRNA synthetase alpha subunit
PAKBJLMI_00844	272621.LBA1200	1.7e-134	485.3	Lactobacillaceae	recO	GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009295,GO:0009987,GO:0033554,GO:0034641,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043590,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360		ko:K03584	ko03440,map03440				ko00000,ko00001,ko03400				Bacteria	1UZ19@1239,3F56P@33958,4HAHI@91061,COG1381@1,COG1381@2	NA|NA|NA	L	Involved in DNA repair and RecF pathway recombination
PAKBJLMI_00845	272621.LBA1201	8.7e-170	602.8	Lactobacillaceae	era	GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006275,GO:0008150,GO:0008156,GO:0009889,GO:0009890,GO:0009892,GO:0010556,GO:0010558,GO:0010605,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019003,GO:0019219,GO:0019222,GO:0030174,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032297,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0045934,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051052,GO:0051053,GO:0051171,GO:0051172,GO:0051302,GO:0051781,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:0090329,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:2000104,GO:2000112,GO:2000113		ko:K03595,ko:K06883					ko00000,ko03009,ko03029				Bacteria	1TP3R@1239,3F3WQ@33958,4H9WF@91061,COG1159@1,COG1159@2	NA|NA|NA	S	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
PAKBJLMI_00846	272621.LBA1202	7.9e-99	366.3	Lactobacillaceae	ybeY	GO:0000469,GO:0000478,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0005488,GO:0006139,GO:0006355,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0016072,GO:0016151,GO:0016787,GO:0016788,GO:0016892,GO:0016894,GO:0019219,GO:0019222,GO:0019538,GO:0022613,GO:0030490,GO:0031323,GO:0031326,GO:0031554,GO:0031564,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042274,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043244,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1903506,GO:2000112,GO:2001141	2.6.99.2,3.5.4.5	ko:K01489,ko:K03474,ko:K03595,ko:K07042	ko00240,ko00750,ko00983,ko01100,map00240,map00750,map00983,map01100	M00124	R01878,R02485,R05838,R08221	RC00074,RC00514,RC01476	ko00000,ko00001,ko00002,ko01000,ko03009,ko03029				Bacteria	1V6BU@1239,3F516@33958,4HIIE@91061,COG0319@1,COG0319@2	NA|NA|NA	S	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
PAKBJLMI_00847	272621.LBA1203	1.3e-176	625.5	Lactobacillaceae	phoH	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944		ko:K06217					ko00000				Bacteria	1TP35@1239,3F4E7@33958,4HBD5@91061,COG1702@1,COG1702@2	NA|NA|NA	T	phosphate starvation-inducible protein PhoH
PAKBJLMI_00848	272621.LBA1204	6.5e-70	270.0	Lactobacillaceae	yqeY			ko:K09117					ko00000				Bacteria	1V6F2@1239,3F6I0@33958,4HIQP@91061,COG1610@1,COG1610@2	NA|NA|NA	S	YqeY-like protein
PAKBJLMI_00849	1033837.WANG_0480	2e-22	110.9	Lactobacillaceae	rpsU	GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904		ko:K02970	ko03010,map03010	M00178			br01610,ko00000,ko00001,ko00002,ko03011				Bacteria	1VEHU@1239,3F81Y@33958,4HNPV@91061,COG0828@1,COG0828@2	NA|NA|NA	J	Belongs to the bacterial ribosomal protein bS21 family
PAKBJLMI_00850	272621.LBA1206	2e-152	545.0	Lactobacillaceae	yqfL		2.7.11.33,2.7.4.28	ko:K09773					ko00000,ko01000				Bacteria	1TPG0@1239,3F3WK@33958,4HB0Q@91061,COG1806@1,COG1806@2	NA|NA|NA	F	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
PAKBJLMI_00851	272621.LBA1207	1.3e-95	355.9	Lactobacillaceae													Bacteria	1UI90@1239,2DVJ8@1,33W59@2,3F5JD@33958,4HD3X@91061	NA|NA|NA	S	Peptidase family M23
PAKBJLMI_00852	272621.LBA1208	2.8e-110	404.4	Lactobacillaceae	msrA		1.8.4.11,1.8.4.12	ko:K07304,ko:K12267					ko00000,ko01000				Bacteria	1TQ3E@1239,3F3YI@33958,4HAIV@91061,COG0225@1,COG0225@2	NA|NA|NA	O	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PAKBJLMI_00853	272621.LBA1209	2.2e-162	578.2	Lactobacillaceae	yitT												Bacteria	1TRBT@1239,3F3PH@33958,4HBPR@91061,COG1284@1,COG1284@2	NA|NA|NA	S	Uncharacterised 5xTM membrane BCR, YitT family COG1284
PAKBJLMI_00854	272621.LBA1210	4.8e-122	443.7	Lactobacillaceae													Bacteria	1U551@1239,29TNS@1,30EWM@2,3F4Q6@33958,4IEWA@91061	NA|NA|NA		
PAKBJLMI_00855	272621.LBA1211	4.8e-162	577.0	Lactobacillaceae	thrB	GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004413,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006555,GO:0006566,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009069,GO:0009086,GO:0009088,GO:0009092,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019202,GO:0019752,GO:0040007,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	2.7.1.39	ko:K00872	ko00260,ko01100,ko01110,ko01120,ko01230,map00260,map01100,map01110,map01120,map01230	M00018	R01771	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000			iECSE_1348.ECSE_0003,iJN678.thrB,iLJ478.TM0545,iSB619.SA_RS06620	Bacteria	1TRWS@1239,3F44T@33958,4HCQN@91061,COG0083@1,COG0083@2	NA|NA|NA	F	Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
PAKBJLMI_00856	272621.LBA1212	1.3e-221	775.4	Lactobacillaceae	hom	GO:0003674,GO:0003824,GO:0004412,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006082,GO:0006520,GO:0006566,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009088,GO:0009987,GO:0016020,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0030312,GO:0040007,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	1.1.1.3,2.7.2.4	ko:K00003,ko:K12524	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01230	M00016,M00017,M00018,M00526,M00527	R00480,R01773,R01775	RC00002,RC00043,RC00087	ko00000,ko00001,ko00002,ko01000			iNJ661.Rv1294,iSB619.SA_RS06610	Bacteria	1TQ2H@1239,3F5BM@33958,4HBAP@91061,COG0460@1,COG0460@2	NA|NA|NA	E	homoserine dehydrogenase
PAKBJLMI_00857	272621.LBA1214	6.4e-287	992.6	Lactobacillaceae	thrC		4.2.3.1	ko:K01733	ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230	M00018	R01466,R05086	RC00017,RC00526	ko00000,ko00001,ko00002,ko01000			iHN637.CLJU_RS16355,iIT341.HP0098	Bacteria	1TPR0@1239,3F3UF@33958,4H9R7@91061,COG0498@1,COG0498@2	NA|NA|NA	E	Threonine synthase
PAKBJLMI_00858	272621.LBA1215	9.4e-261	905.6	Lactobacillaceae	lysC	GO:0000166,GO:0003674,GO:0003824,GO:0004072,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006553,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0017076,GO:0019202,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046451,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	2.7.2.4	ko:K00928	ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230	M00016,M00017,M00018,M00033,M00525,M00526,M00527	R00480	RC00002,RC00043	ko00000,ko00001,ko00002,ko01000			iYO844.BSU03790	Bacteria	1TPQJ@1239,3F48V@33958,4HAEP@91061,COG0527@1,COG0527@2	NA|NA|NA	E	Belongs to the aspartokinase family
PAKBJLMI_00859	272621.LBA1216	0.0	1084.3	Lactobacillaceae	oppA2			ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	M00239,M00439			ko00000,ko00001,ko00002,ko02000	3.A.1.5,3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25			Bacteria	1TNYQ@1239,3F4TA@33958,4HAMK@91061,COG4166@1,COG4166@2	NA|NA|NA	E	Bacterial extracellular solute-binding proteins, family 5 Middle
PAKBJLMI_00860	257314.LJ_1744	1.1e-18	99.4	Lactobacillaceae	yjgN	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944											Bacteria	1VA3P@1239,3FCDS@33958,4HKWF@91061,COG4269@1,COG4269@2	NA|NA|NA	S	Bacterial protein of unknown function (DUF898)
PAKBJLMI_00861	272621.LBA1217	2.8e-103	381.3	Lactobacillaceae	lacA		2.3.1.79	ko:K00661					ko00000,ko01000				Bacteria	1V06U@1239,3FBEW@33958,4IPZB@91061,COG0110@1,COG0110@2	NA|NA|NA	S	Transferase hexapeptide repeat
PAKBJLMI_00862	272621.LBA1218	0.0	1247.6	Lactobacillaceae				ko:K14201	ko05150,map05150				ko00000,ko00001				Bacteria	1U7XQ@1239,2BNFG@1,32H3B@2,3FAAU@33958,4IHV3@91061	NA|NA|NA		
PAKBJLMI_00863	1423754.BALY01000064_gene690	2e-10	73.9	Lactobacillaceae													Bacteria	1U6TD@1239,2DKS5@1,30AKA@2,3F8GG@33958,4IGM6@91061	NA|NA|NA		
PAKBJLMI_00864	272621.LBA1220	4.5e-252	876.7	Lactobacillaceae	merA	GO:0000302,GO:0000305,GO:0001101,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0010035,GO:0016491,GO:0016667,GO:0019725,GO:0042221,GO:0042592,GO:0044424,GO:0044464,GO:0045454,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1901530,GO:1901700,GO:1990748	1.16.1.1,1.8.1.7	ko:K00383,ko:K00520,ko:K21739	ko00480,ko04918,map00480,map04918		R00094,R00115	RC00011	ko00000,ko00001,ko01000				Bacteria	1TP1W@1239,3FC6T@33958,4HBZF@91061,COG1249@1,COG1249@2	NA|NA|NA	C	Pyridine nucleotide-disulfide oxidoreductase
PAKBJLMI_00865	891391.LAC30SC_06855	6.4e-201	706.8	Lactobacillaceae	brnQ	GO:0003333,GO:0003674,GO:0005215,GO:0005304,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0006855,GO:0006865,GO:0008150,GO:0008324,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015175,GO:0015179,GO:0015188,GO:0015190,GO:0015238,GO:0015318,GO:0015658,GO:0015711,GO:0015803,GO:0015804,GO:0015807,GO:0015818,GO:0015820,GO:0015829,GO:0015849,GO:0015893,GO:0016020,GO:0022857,GO:0034220,GO:0042221,GO:0042493,GO:0044464,GO:0046942,GO:0046943,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098655,GO:0098656,GO:1902475,GO:1903785,GO:1903825,GO:1905039		ko:K03311					ko00000	2.A.26			Bacteria	1TQIS@1239,3F3KC@33958,4HAKA@91061,COG1114@1,COG1114@2	NA|NA|NA	U	Component of the transport system for branched-chain amino acids
PAKBJLMI_00866	272621.LBA1225	1.3e-295	1021.5	Lactobacillaceae													Bacteria	1W1FZ@1239,2FIUN@1,34AK2@2,3F4EU@33958,4HYXZ@91061	NA|NA|NA		
PAKBJLMI_00867	272621.LBA1226	1.1e-121	442.6	Lactobacillaceae	VY92_08690		5.3.1.32	ko:K11530	ko02024,map02024				ko00000,ko00001,ko01000				Bacteria	1VVR5@1239,3F5NS@33958,4HWFJ@91061,COG1359@1,COG1359@2	NA|NA|NA	G	Antibiotic biosynthesis monooxygenase
PAKBJLMI_00868	272621.LBA1227	1.3e-99	369.0	Lactobacillaceae													Bacteria	1U5E5@1239,2AJU9@1,31AGT@2,3F5PH@33958,4IF5F@91061	NA|NA|NA		
PAKBJLMI_00869	272621.LBA1229	2.2e-108	398.3	Lactobacillaceae													Bacteria	1TT5B@1239,3F5CC@33958,4HK1M@91061,COG0583@1,COG0583@2	NA|NA|NA	K	LysR substrate binding domain
PAKBJLMI_00870	891391.LAC30SC_06875	3.7e-15	86.7	Lactobacillaceae													Bacteria	1U6K3@1239,2CETM@1,30AF4@2,3F82Q@33958,4IGCS@91061	NA|NA|NA		
PAKBJLMI_00871	272621.LBA1231	4.8e-229	800.0	Lactobacillaceae													Bacteria	1V7PR@1239,3FBA9@33958,4HV9V@91061,COG4552@1,COG4552@2	NA|NA|NA	S	Sterol carrier protein domain
PAKBJLMI_00872	272621.LBA1232	4.8e-99	367.1	Lactobacillaceae	citX		2.4.2.52,2.7.7.61	ko:K05964,ko:K13927	ko02020,map02020		R09675,R10706	RC00049,RC00063	ko00000,ko00001,ko01000				Bacteria	1VB3E@1239,3F74S@33958,4HMZ5@91061,COG3697@1,COG3697@2	NA|NA|NA	HI	Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
PAKBJLMI_00873	272621.LBA1233	3.2e-74	284.3	Lactobacillaceae	lysR5												Bacteria	1UXFR@1239,3F4XG@33958,4HBNZ@91061,COG0583@1,COG0583@2	NA|NA|NA	K	LysR substrate binding domain
PAKBJLMI_00874	272621.LBA1233	4.9e-70	270.4	Lactobacillaceae	lysR5												Bacteria	1UXFR@1239,3F4XG@33958,4HBNZ@91061,COG0583@1,COG0583@2	NA|NA|NA	K	LysR substrate binding domain
PAKBJLMI_00875	272621.LBA1234	6.1e-82	310.1	Lactobacillaceae			3.6.3.2,3.6.3.6	ko:K01531,ko:K01535	ko00190,map00190				ko00000,ko00001,ko01000	3.A.3.3,3.A.3.4			Bacteria	1TPF5@1239,3F55J@33958,4HVA4@91061,COG0474@1,COG0474@2	NA|NA|NA	P	Cation transporter/ATPase, N-terminus
PAKBJLMI_00876	272621.LBA1234	4.7e-311	1072.8	Lactobacillaceae			3.6.3.2,3.6.3.6	ko:K01531,ko:K01535	ko00190,map00190				ko00000,ko00001,ko01000	3.A.3.3,3.A.3.4			Bacteria	1TPF5@1239,3F55J@33958,4HVA4@91061,COG0474@1,COG0474@2	NA|NA|NA	P	Cation transporter/ATPase, N-terminus
PAKBJLMI_00877	272621.LBA1235	1.8e-87	328.6	Lactobacillaceae			3.4.21.96	ko:K01361					ko00000,ko01000,ko01002,ko03110				Bacteria	1U5RD@1239,29NWN@1,309UR@2,3F6D7@33958,4IFFJ@91061	NA|NA|NA	S	SLAP domain
PAKBJLMI_00878	272621.LBA1236	3.2e-286	990.3	Lactobacillaceae	cls	GO:0003674,GO:0003824,GO:0005575,GO:0006629,GO:0006644,GO:0006650,GO:0006655,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0008808,GO:0009058,GO:0009987,GO:0016020,GO:0016740,GO:0016772,GO:0016780,GO:0019637,GO:0030572,GO:0032048,GO:0032049,GO:0032502,GO:0043934,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0045017,GO:0046471,GO:0046474,GO:0046486,GO:0071704,GO:0090407,GO:1901576		ko:K06131	ko00564,ko01100,map00564,map01100		R07390	RC00017	ko00000,ko00001,ko01000				Bacteria	1TPKY@1239,3F3SF@33958,4H9TI@91061,COG1502@1,COG1502@2	NA|NA|NA	I	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PAKBJLMI_00879	272621.LBA1237	4.6e-151	540.4	Lactobacillaceae	metAA	GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006563,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008374,GO:0008652,GO:0008899,GO:0009001,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016407,GO:0016412,GO:0016413,GO:0016740,GO:0016746,GO:0016747,GO:0016748,GO:0016750,GO:0019344,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	2.3.1.46	ko:K00651	ko00270,ko00920,ko01100,ko01110,ko01230,map00270,map00920,map01100,map01110,map01230	M00017	R01777	RC00004,RC00041	ko00000,ko00001,ko00002,ko01000			iHN637.CLJU_RS11970	Bacteria	1TQVR@1239,3F5CA@33958,4H9W4@91061,COG1897@1,COG1897@2	NA|NA|NA	E	Transfers an acetyl group from acetyl-CoA to
PAKBJLMI_00880	272621.LBA1238	1.6e-171	608.6	Lactobacillaceae	cysK	GO:0000096,GO:0000097,GO:0000098,GO:0003674,GO:0003824,GO:0004122,GO:0004124,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006555,GO:0006563,GO:0006790,GO:0006807,GO:0008134,GO:0008144,GO:0008150,GO:0008152,GO:0008284,GO:0008652,GO:0009056,GO:0009058,GO:0009063,GO:0009066,GO:0009068,GO:0009069,GO:0009070,GO:0009087,GO:0009987,GO:0016043,GO:0016053,GO:0016054,GO:0016740,GO:0016765,GO:0016829,GO:0016835,GO:0016836,GO:0016846,GO:0019344,GO:0019752,GO:0019842,GO:0022607,GO:0030170,GO:0032991,GO:0032993,GO:0036094,GO:0042127,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043388,GO:0043436,GO:0043933,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044272,GO:0044273,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046395,GO:0046983,GO:0048037,GO:0048518,GO:0048522,GO:0050662,GO:0050789,GO:0050794,GO:0051098,GO:0051099,GO:0051101,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0051291,GO:0065003,GO:0065007,GO:0065009,GO:0070279,GO:0071704,GO:0071840,GO:0080146,GO:0097159,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901607,GO:1904796,GO:1904798,GO:2000677,GO:2000679	2.5.1.47	ko:K01738	ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230	M00021	R00897,R03601,R04859	RC00020,RC02814,RC02821	ko00000,ko00001,ko00002,ko01000				Bacteria	1TP30@1239,3F4VD@33958,4HAMU@91061,COG0031@1,COG0031@2	NA|NA|NA	E	Belongs to the cysteine synthase cystathionine beta- synthase family
PAKBJLMI_00881	272621.LBA1239	1.1e-211	742.3	Lactobacillaceae				ko:K09963					ko00000				Bacteria	1TRIY@1239,3F4FK@33958,4H9V2@91061,COG3589@1,COG3589@2	NA|NA|NA	S	Bacterial protein of unknown function (DUF871)
PAKBJLMI_00882	272621.LBA1240	4.7e-151	540.4	Lactobacillaceae	citG		2.4.2.52,2.7.7.61	ko:K05966,ko:K13927,ko:K13930	ko02020,map02020		R09675,R10706	RC00049,RC00063	ko00000,ko00001,ko01000				Bacteria	1TQGQ@1239,3F4SU@33958,4HGCS@91061,COG1767@1,COG1767@2	NA|NA|NA	H	2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
PAKBJLMI_00884	272621.LBA1241	2.9e-78	297.7	Lactobacillaceae													Bacteria	1V125@1239,3F5TK@33958,4HFVJ@91061,COG0454@1,COG0456@2	NA|NA|NA	K	Acetyltransferase (GNAT) domain
PAKBJLMI_00885	272621.LBA1242	3.7e-96	357.5	Lactobacillaceae	apt	GO:0003674,GO:0003824,GO:0003999,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006144,GO:0006168,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009113,GO:0009987,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0034641,GO:0034654,GO:0042440,GO:0043094,GO:0043096,GO:0043101,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046083,GO:0046084,GO:0046112,GO:0046148,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	2.4.2.22,2.4.2.7	ko:K00759,ko:K03816,ko:K09685	ko00230,ko01100,ko01110,map00230,map01100,map01110		R00190,R01229,R02142,R04378	RC00063,RC00122	ko00000,ko00001,ko01000,ko03000,ko04147				Bacteria	1V1BV@1239,3F4DB@33958,4HFUA@91061,COG0503@1,COG0503@2	NA|NA|NA	F	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
PAKBJLMI_00886	272621.LBA1243	0.0	1521.1	Lactobacillaceae	recJ			ko:K07462	ko03410,ko03430,ko03440,map03410,map03430,map03440				ko00000,ko00001,ko01000,ko03400				Bacteria	1TPXE@1239,3F42C@33958,4H9UP@91061,COG0608@1,COG0608@2	NA|NA|NA	L	Single-stranded-DNA-specific exonuclease RecJ
PAKBJLMI_00887	272621.LBA1244	4.8e-120	437.2	Lactobacillaceae	srtA		3.4.22.70	ko:K07284					ko00000,ko01000,ko01002,ko01011				Bacteria	1V83Z@1239,3F54V@33958,4HJV9@91061,COG3764@1,COG3764@2	NA|NA|NA	M	sortase family
PAKBJLMI_00888	272621.LBA1245	0.0	1214.5	Lactobacillaceae	lepA			ko:K03596	ko05134,map05134				ko00000,ko00001				Bacteria	1TP0G@1239,3F3Z1@33958,4HASA@91061,COG0481@1,COG0481@2	NA|NA|NA	M	Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
PAKBJLMI_00889	272621.LBA1246	7.8e-200	703.0	Lactobacillaceae	dnaJ			ko:K03686					ko00000,ko03029,ko03110				Bacteria	1TP00@1239,3F490@33958,4H9KA@91061,COG0484@1,COG0484@2	NA|NA|NA	O	ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
PAKBJLMI_00890	272621.LBA1247	0.0	1094.7	Lactobacillaceae	dnaK	GO:0001871,GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0008150,GO:0009986,GO:0030246,GO:0030247,GO:0044464,GO:0051704,GO:0098630,GO:0098743,GO:2001065		ko:K04043	ko03018,ko04212,ko05152,map03018,map04212,map05152				ko00000,ko00001,ko03019,ko03029,ko03110,ko04147	1.A.33.1			Bacteria	1TP1J@1239,3F48C@33958,4HA9S@91061,COG0443@1,COG0443@2	NA|NA|NA	O	Heat shock 70 kDa protein
PAKBJLMI_00891	272621.LBA1248	1.9e-77	295.4	Lactobacillaceae	grpE	GO:0000166,GO:0000774,GO:0001871,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006950,GO:0007154,GO:0008150,GO:0009266,GO:0009267,GO:0009408,GO:0009605,GO:0009628,GO:0009986,GO:0009987,GO:0009991,GO:0016043,GO:0017076,GO:0019904,GO:0022607,GO:0030234,GO:0030246,GO:0030247,GO:0030312,GO:0030554,GO:0031667,GO:0031668,GO:0031669,GO:0032991,GO:0033554,GO:0036094,GO:0040007,GO:0042594,GO:0042802,GO:0042803,GO:0043933,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0046983,GO:0050790,GO:0050896,GO:0051082,GO:0051716,GO:0060589,GO:0060590,GO:0065003,GO:0065007,GO:0065009,GO:0071496,GO:0071840,GO:0071944,GO:0097159,GO:0098772,GO:1901265,GO:1901363,GO:2001065		ko:K03687					ko00000,ko03029,ko03110				Bacteria	1V6G2@1239,3F4DY@33958,4HIRK@91061,COG0576@1,COG0576@2	NA|NA|NA	O	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
PAKBJLMI_00892	272621.LBA1249	1.7e-193	681.8	Lactobacillaceae	hrcA	GO:0005575,GO:0005623,GO:0005886,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016020,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0044464,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141		ko:K03705					ko00000,ko03000				Bacteria	1TQP7@1239,3F3ST@33958,4HAX5@91061,COG1420@1,COG1420@2	NA|NA|NA	K	Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
PAKBJLMI_00893	272621.LBA1250	2.5e-283	980.7	Lactobacillaceae	lsa			ko:K06158,ko:K19350	ko02010,map02010				ko00000,ko00001,ko01504,ko02000,ko03012	3.A.1.121			Bacteria	1TNYS@1239,3F53D@33958,4HBFK@91061,COG0488@1,COG0488@2	NA|NA|NA	S	ABC transporter
PAKBJLMI_00894	272621.LBA1252	5.2e-178	630.2	Lactobacillaceae	ribF		2.7.1.26,2.7.7.2	ko:K11753	ko00740,ko01100,ko01110,map00740,map01100,map01110	M00125	R00161,R00549	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000			iSB619.SA_RS06310	Bacteria	1TPKS@1239,3F3TG@33958,4H9KE@91061,COG0196@1,COG0196@2	NA|NA|NA	H	Belongs to the ribF family
PAKBJLMI_00895	272621.LBA1253	1e-167	595.9	Lactobacillaceae	truB	GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1990481	5.4.99.25	ko:K03177,ko:K03483					ko00000,ko01000,ko03000,ko03016			iSB619.SA_RS06305	Bacteria	1TP9Y@1239,3F3NX@33958,4HA9X@91061,COG0130@1,COG0130@2	NA|NA|NA	J	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
PAKBJLMI_00896	272621.LBA1254	3.3e-59	234.2	Lactobacillaceae	rbfA	GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009266,GO:0009409,GO:0009628,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0030490,GO:0033554,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0042274,GO:0043021,GO:0043024,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071840,GO:0090304,GO:1901360		ko:K02834					ko00000,ko03009				Bacteria	1VA0P@1239,3F6WZ@33958,4HII1@91061,COG0858@1,COG0858@2	NA|NA|NA	J	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
PAKBJLMI_00897	272621.LBA1255	0.0	1439.5	Lactobacillaceae	infB	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464		ko:K02519					ko00000,ko03012,ko03029				Bacteria	1TPAI@1239,3F3JV@33958,4HA8S@91061,COG0532@1,COG0532@2	NA|NA|NA	J	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
PAKBJLMI_00898	272621.LBA1256	8.4e-48	196.1	Lactobacillaceae	rplGA			ko:K07590,ko:K07742	ko03010,map03010	M00178			br01610,ko00000,ko00001,ko00002,ko03011				Bacteria	1VEYG@1239,3F7ZK@33958,4HNY7@91061,COG1358@1,COG1358@2	NA|NA|NA	J	ribosomal protein
PAKBJLMI_00899	272621.LBA1258	1.4e-47	195.3	Lactobacillaceae	ylxR			ko:K02600,ko:K07742					ko00000,ko03009,ko03021				Bacteria	1VEJS@1239,3F7E2@33958,4HKBY@91061,COG2740@1,COG2740@2	NA|NA|NA	K	Protein of unknown function (DUF448)
PAKBJLMI_00900	272621.LBA1259	3.3e-198	697.6	Lactobacillaceae	nusA	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0031554,GO:0031564,GO:0043244,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:1903506,GO:2000112,GO:2001141		ko:K02600,ko:K02945	ko03010,map03010	M00178			br01610,ko00000,ko00001,ko00002,ko03009,ko03011,ko03021				Bacteria	1TPB3@1239,3F3KZ@33958,4HA7F@91061,COG0195@1,COG0195@2	NA|NA|NA	K	Participates in both transcription termination and antitermination
PAKBJLMI_00901	272621.LBA1260	7.2e-83	313.2	Lactobacillaceae	rimP	GO:0000028,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:1901564,GO:1901566,GO:1901576		ko:K09748					ko00000,ko03009				Bacteria	1V6KT@1239,3F6GZ@33958,4HH88@91061,COG0779@1,COG0779@2	NA|NA|NA	J	Required for maturation of 30S ribosomal subunits
PAKBJLMI_00902	272621.LBA1261	0.0	2845.1	Lactobacillaceae	polC	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464	2.7.7.7	ko:K02342,ko:K03763	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400				Bacteria	1TPAG@1239,3F4AN@33958,4H9RF@91061,COG2176@1,COG2176@2	NA|NA|NA	L	Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PAKBJLMI_00903	272621.LBA1262	0.0	1117.8	Lactobacillaceae	proS	GO:0002161,GO:0003674,GO:0003824,GO:0004812,GO:0004827,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006433,GO:0006450,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0043906,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576	6.1.1.15	ko:K01881	ko00970,map00970	M00359,M00360	R03661	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016			iJN678.proS,iUTI89_1310.UTI89_C0210	Bacteria	1TRBV@1239,3F44A@33958,4H9NN@91061,COG0442@1,COG0442@2	NA|NA|NA	J	Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
PAKBJLMI_00904	272621.LBA1263	2.6e-196	691.4	Lactobacillaceae	rseP	GO:0000988,GO:0000989,GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006355,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016020,GO:0016021,GO:0016787,GO:0019219,GO:0019222,GO:0019538,GO:0031224,GO:0031226,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0040007,GO:0043170,GO:0043856,GO:0044238,GO:0044425,GO:0044459,GO:0044464,GO:0045152,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0070011,GO:0071704,GO:0071944,GO:0080090,GO:0140096,GO:0140110,GO:1901564,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141	3.4.21.107,3.4.21.116	ko:K04771,ko:K06399,ko:K11749,ko:K16922	ko01503,ko02020,ko02024,ko04112,map01503,map02020,map02024,map04112	M00728			ko00000,ko00001,ko00002,ko01000,ko01002,ko03110				Bacteria	1TPMC@1239,3F3TM@33958,4HAQ5@91061,COG0750@1,COG0750@2	NA|NA|NA	M	zinc metalloprotease
PAKBJLMI_00905	272621.LBA1265	1.7e-145	521.9	Lactobacillaceae	cdsA	GO:0003674,GO:0003824,GO:0004605,GO:0005575,GO:0006139,GO:0006220,GO:0006221,GO:0006629,GO:0006644,GO:0006650,GO:0006655,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009117,GO:0009165,GO:0009987,GO:0016020,GO:0016024,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044271,GO:0044281,GO:0045017,GO:0046341,GO:0046471,GO:0046474,GO:0046483,GO:0046486,GO:0055086,GO:0070567,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	2.7.7.41	ko:K00981	ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070	M00093	R01799	RC00002	ko00000,ko00001,ko00002,ko01000			iLJ478.TM1397	Bacteria	1UPNB@1239,3F4AF@33958,4IV81@91061,COG0575@1,COG0575@2	NA|NA|NA	I	Belongs to the CDS family
PAKBJLMI_00906	272621.LBA1266	9.3e-138	496.1	Lactobacillaceae	uppS	GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0071704,GO:1901576,GO:1901615,GO:1901617	2.5.1.31	ko:K00806	ko00900,ko01110,map00900,map01110		R06447	RC00279,RC02839	ko00000,ko00001,ko01000,ko01006				Bacteria	1TQTS@1239,3F42M@33958,4HA37@91061,COG0020@1,COG0020@2	NA|NA|NA	H	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
PAKBJLMI_00907	1423748.BALB01000013_gene1270	8.7e-88	329.7	Lactobacillaceae	frr	GO:0002181,GO:0002184,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0022411,GO:0030312,GO:0032984,GO:0034641,GO:0034645,GO:0040007,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576		ko:K02838					ko00000,ko03012				Bacteria	1V1F2@1239,3F4X2@33958,4HFSH@91061,COG0233@1,COG0233@2	NA|NA|NA	J	Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
PAKBJLMI_00908	272621.LBA1268	4.9e-131	473.8	Lactobacillaceae	pyrH	GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006213,GO:0006220,GO:0006221,GO:0006225,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009163,GO:0009165,GO:0009185,GO:0009188,GO:0009193,GO:0009194,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0015949,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0033862,GO:0034404,GO:0034641,GO:0034654,GO:0040007,GO:0042455,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044464,GO:0046048,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0046872,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0071944,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659	2.7.4.22	ko:K09903	ko00240,ko01100,map00240,map01100		R00158	RC00002	ko00000,ko00001,ko01000			iSB619.SA_RS06240	Bacteria	1TPXN@1239,3F42J@33958,4H9UB@91061,COG0528@1,COG0528@2	NA|NA|NA	F	Catalyzes the reversible phosphorylation of UMP to UDP
PAKBJLMI_00909	272621.LBA1269	2.4e-184	651.4	Lactobacillaceae	tsf	GO:0001871,GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005085,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009986,GO:0009987,GO:0010467,GO:0019538,GO:0019899,GO:0030246,GO:0030247,GO:0034641,GO:0034645,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0051020,GO:0065007,GO:0065009,GO:0071704,GO:0097159,GO:0098772,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:2001065		ko:K02357					ko00000,ko03012,ko03029				Bacteria	1TPFJ@1239,3F459@33958,4HBDV@91061,COG0264@1,COG0264@2	NA|NA|NA	J	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
PAKBJLMI_00910	272621.LBA1270	1.1e-141	509.2	Lactobacillaceae	rpsB	GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030312,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046872,GO:0046914,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904		ko:K02967	ko03010,map03010	M00178,M00179			br01610,ko00000,ko00001,ko00002,ko03011				Bacteria	1TPNA@1239,3F3M1@33958,4H9N5@91061,COG0052@1,COG0052@2	NA|NA|NA	J	Belongs to the universal ribosomal protein uS2 family
PAKBJLMI_00911	272621.LBA1271	1.3e-198	698.7	Lactobacillaceae	yabB	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016740,GO:0016741,GO:0032259,GO:0044424,GO:0044444,GO:0044464	2.1.1.223	ko:K07461,ko:K15460					ko00000,ko01000,ko03016				Bacteria	1TQ25@1239,3F4C5@33958,4HA8W@91061,COG2827@1,COG2827@2,COG4123@1,COG4123@2	NA|NA|NA	L	Methyltransferase small domain
PAKBJLMI_00912	272621.LBA1272	6.4e-116	423.3	Lactobacillaceae	plsC	GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0008374,GO:0016020,GO:0016411,GO:0016740,GO:0016746,GO:0016747,GO:0042171,GO:0044464,GO:0071617,GO:0071944	2.3.1.51	ko:K00655	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	M00089	R02241,R09381	RC00004,RC00037,RC00039	ko00000,ko00001,ko00002,ko01000,ko01004				Bacteria	1U8N2@1239,3F4QB@33958,4HDQR@91061,COG0204@1,COG0204@2	NA|NA|NA	I	Acyltransferase
PAKBJLMI_00913	272621.LBA1274	1e-231	808.9	Lactobacillaceae	cfa		2.1.1.317,2.1.1.79	ko:K00574,ko:K20238					ko00000,ko01000				Bacteria	1TSG4@1239,3F3PA@33958,4HDKI@91061,COG2230@1,COG2230@2	NA|NA|NA	M	cyclopropane-fatty-acyl-phospholipid synthase
PAKBJLMI_00914	272621.LBA1275	0.0	1310.0	Lactobacillaceae	pepO		3.4.24.71	ko:K01415,ko:K07386					ko00000,ko01000,ko01002,ko04147				Bacteria	1TQTA@1239,3F4CX@33958,4HDSF@91061,COG3590@1,COG3590@2	NA|NA|NA	O	Peptidase family M13
PAKBJLMI_00915	272621.LBA1276	3.6e-292	1010.4	Lactobacillaceae	mdlB	GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005319,GO:0005488,GO:0005524,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006869,GO:0008144,GO:0008150,GO:0010876,GO:0015399,GO:0015405,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0030554,GO:0031224,GO:0032553,GO:0032555,GO:0032559,GO:0033036,GO:0034040,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0043167,GO:0043168,GO:0043492,GO:0044425,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363		ko:K06147,ko:K18890	ko02010,map02010	M00707			ko00000,ko00001,ko00002,ko02000	3.A.1.106,3.A.1.106.13,3.A.1.106.5,3.A.1.109,3.A.1.21			Bacteria	1TP0B@1239,3F3PD@33958,4HA3S@91061,COG1132@1,COG1132@2	NA|NA|NA	V	ABC transporter
PAKBJLMI_00916	272621.LBA1277	0.0	1135.2	Lactobacillaceae	mdlA	GO:0000166,GO:0003674,GO:0005488,GO:0005524,GO:0005575,GO:0005623,GO:0005886,GO:0008144,GO:0016020,GO:0016021,GO:0017076,GO:0030554,GO:0031224,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044425,GO:0044464,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363		ko:K06148,ko:K18889	ko02010,map02010	M00707			ko00000,ko00001,ko00002,ko02000	3.A.1,3.A.1.106.13,3.A.1.106.5			Bacteria	1TP0B@1239,3F3PD@33958,4HA3S@91061,COG1132@1,COG1132@2	NA|NA|NA	V	ABC transporter
PAKBJLMI_00917	272621.LBA1278	4.2e-30	136.7	Lactobacillaceae	yneF			ko:K09976					ko00000				Bacteria	1VEJC@1239,3F809@33958,4HKMJ@91061,COG3763@1,COG3763@2	NA|NA|NA	S	Uncharacterised protein family (UPF0154)
PAKBJLMI_00918	272621.LBA1279	1.1e-37	162.2	Lactobacillaceae	ynzC												Bacteria	1VEKJ@1239,3F87S@33958,4HNIB@91061,COG4224@1,COG4224@2	NA|NA|NA	S	UPF0291 protein
PAKBJLMI_00919	272621.LBA1280	1.5e-112	412.1	Lactobacillaceae	lexA		3.4.21.88	ko:K01356		M00729			ko00000,ko00002,ko01000,ko01002,ko03400				Bacteria	1TQ3H@1239,3F3JG@33958,4HBHA@91061,COG1974@1,COG1974@2	NA|NA|NA	K	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
PAKBJLMI_00920	272621.LBA1281	3.1e-144	517.7	Lactobacillaceae													Bacteria	1V4VT@1239,3F4P8@33958,4HXCK@91061,COG2755@1,COG2755@2	NA|NA|NA	E	GDSL-like Lipase/Acylhydrolase family
PAKBJLMI_00921	272621.LBA1282	3.7e-122	444.1	Lactobacillaceae	ung2		3.2.2.27	ko:K21929	ko03410,map03410				ko00000,ko00001,ko01000,ko03400				Bacteria	1V4M9@1239,3F4GW@33958,4HHJN@91061,COG1573@1,COG1573@2	NA|NA|NA	L	Uracil-DNA glycosylase
PAKBJLMI_00922	272621.LBA1283	3.4e-177	627.5	Lactobacillaceae	yfdH		2.4.2.53	ko:K10012,ko:K12999,ko:K13670	ko00520,ko01503,map00520,map01503	M00721,M00761	R07661	RC00005,RC02954	ko00000,ko00001,ko00002,ko01000,ko01003,ko01005,ko02000	4.D.2.1.8	GT2		Bacteria	1UHWE@1239,3F3JX@33958,4ISA4@91061,COG1216@1,COG1216@2	NA|NA|NA	M	Glycosyltransferase, group 2 family protein
PAKBJLMI_00923	272621.LBA1284	8e-288	995.7	Lactobacillaceae													Bacteria	1UZCF@1239,3F48H@33958,4HDPY@91061,COG4485@1,COG4485@2	NA|NA|NA	S	Bacterial membrane protein, YfhO
PAKBJLMI_00924	272621.LBA1285	1.1e-69	269.2	Lactobacillaceae			2.4.1.83	ko:K00721	ko00510,ko01100,map00510,map01100		R01009	RC00005	ko00000,ko00001,ko01000,ko01003		GT2		Bacteria	1VP71@1239,3F73E@33958,4HSE0@91061,COG2246@1,COG2246@2	NA|NA|NA	S	GtrA-like protein
PAKBJLMI_00925	1423748.BALB01000030_gene1896	1.1e-56	225.7	Lactobacillaceae	rplS	GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070180,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904		ko:K02884	ko03010,map03010	M00178			br01610,ko00000,ko00001,ko00002,ko03011				Bacteria	1V6FT@1239,3F6K4@33958,4HIK3@91061,COG0335@1,COG0335@2	NA|NA|NA	J	This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
PAKBJLMI_00926	405566.lhv_1369	5e-128	463.8	Lactobacillaceae	trmD	GO:0000287,GO:0001510,GO:0002939,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0040007,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0050518,GO:0052906,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360	2.1.1.228,4.6.1.12	ko:K00554,ko:K01770	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	M00096	R00597,R05637	RC00002,RC00003,RC00334,RC01440	ko00000,ko00001,ko00002,ko01000,ko03016				Bacteria	1TPBV@1239,3F3NP@33958,4HBFV@91061,COG0336@1,COG0336@2	NA|NA|NA	J	Belongs to the RNA methyltransferase TrmD family
PAKBJLMI_00927	272621.LBA1288	4.7e-96	357.1	Lactobacillaceae	rimM	GO:0000028,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016072,GO:0022607,GO:0022613,GO:0022618,GO:0030490,GO:0034470,GO:0034622,GO:0034641,GO:0034660,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:1901360		ko:K02860					ko00000,ko03009				Bacteria	1V6HD@1239,3F74P@33958,4HH3H@91061,COG0806@1,COG0806@2	NA|NA|NA	J	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
PAKBJLMI_00928	272621.LBA1289	7.6e-45	186.0	Lactobacillaceae	rpsP	GO:0000028,GO:0000217,GO:0000400,GO:0003674,GO:0003676,GO:0003677,GO:0003735,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006259,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0016787,GO:0016788,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904		ko:K02959	ko03010,map03010	M00178			br01610,ko00000,ko00001,ko00002,ko03011,ko03029				Bacteria	1VA0X@1239,3F6VV@33958,4HKNN@91061,COG0228@1,COG0228@2	NA|NA|NA	J	Belongs to the bacterial ribosomal protein bS16 family
PAKBJLMI_00929	272621.LBA1290	2.9e-228	797.7	Lactobacillaceae	ffh	GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0030312,GO:0040007,GO:0044464,GO:0071944	3.6.5.4	ko:K03106	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335			ko00000,ko00001,ko00002,ko01000,ko02044	3.A.5.1,3.A.5.2,3.A.5.7,3.A.5.8,3.A.5.9			Bacteria	1TP06@1239,3F40R@33958,4H9T4@91061,COG0541@1,COG0541@2	NA|NA|NA	U	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
PAKBJLMI_00930	272621.LBA1291	1.6e-55	221.9	Lactobacillaceae	ylxM	GO:0003674,GO:0008150,GO:0030234,GO:0030695,GO:0050790,GO:0060589,GO:0065007,GO:0065009,GO:0098772		ko:K09787					ko00000				Bacteria	1VEGP@1239,3F7FG@33958,4HKK6@91061,COG2739@1,COG2739@2	NA|NA|NA	S	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
PAKBJLMI_00931	272621.LBA1292	3.2e-259	900.6	Lactobacillaceae	yfnA			ko:K03294					ko00000	2.A.3.2			Bacteria	1TQ4K@1239,3FCAJ@33958,4HA32@91061,COG0531@1,COG0531@2	NA|NA|NA	E	amino acid
PAKBJLMI_00932	272621.LBA1293	2.8e-67	261.2	Lactobacillaceae													Bacteria	1U68Z@1239,29P84@1,30A66@2,3F7C1@33958,4IG04@91061	NA|NA|NA		
PAKBJLMI_00933	272621.LBA1294	2.5e-288	997.3	Lactobacillaceae	pipD			ko:K08659					ko00000,ko01000,ko01002				Bacteria	1TQ0F@1239,3F3M4@33958,4HC3G@91061,COG4690@1,COG4690@2	NA|NA|NA	E	Dipeptidase
PAKBJLMI_00934	272621.LBA1295	2.1e-161	575.5	Lactobacillaceae	ftsY			ko:K03110	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335			ko00000,ko00001,ko00002,ko02044	3.A.5.1,3.A.5.2,3.A.5.7			Bacteria	1TPRI@1239,3F3YC@33958,4HA6A@91061,COG0552@1,COG0552@2	NA|NA|NA	U	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
PAKBJLMI_00935	272621.LBA1296	0.0	1428.3	Lactobacillaceae	smc			ko:K03529					ko00000,ko03036				Bacteria	1TPJV@1239,3F478@33958,4HB89@91061,COG1196@1,COG1196@2	NA|NA|NA	D	Required for chromosome condensation and partitioning
PAKBJLMI_00936	272621.LBA1297	3.8e-125	454.1	Lactobacillaceae	rnc	GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363	3.1.26.3	ko:K03685	ko03008,ko05205,map03008,map05205				ko00000,ko00001,ko01000,ko03009,ko03019,ko03036				Bacteria	1TPGC@1239,3F564@33958,4HAWU@91061,COG0571@1,COG0571@2	NA|NA|NA	J	Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
PAKBJLMI_00937	272621.LBA0614	1.2e-241	842.0	Lactobacillaceae				ko:K07497					ko00000				Bacteria	1TQQY@1239,3FCFA@33958,4HC8M@91061,COG2801@1,COG2801@2	NA|NA|NA	L	COG2963 Transposase and inactivated derivatives
PAKBJLMI_00938	272621.LBA1300	0.0	1174.8	Lactobacillaceae	oppA			ko:K02035	ko02024,map02024	M00239			ko00000,ko00001,ko00002,ko02000	3.A.1.5			Bacteria	1TQ0N@1239,3F3KW@33958,4HARF@91061,COG0747@1,COG0747@2	NA|NA|NA	E	ABC transporter substrate-binding protein
PAKBJLMI_00939	272621.LBA1301	0.0	1193.7	Lactobacillaceae	oppA			ko:K02035	ko02024,map02024	M00239			ko00000,ko00001,ko00002,ko02000	3.A.1.5			Bacteria	1TQ0N@1239,3F3KW@33958,4HARF@91061,COG0747@1,COG0747@2	NA|NA|NA	E	ABC transporter substrate-binding protein
PAKBJLMI_00940	272621.LBA1302	2.9e-144	518.1	Lactobacillaceae	oppC			ko:K02034,ko:K15582	ko01501,ko02010,ko02024,map01501,map02010,map02024	M00239,M00439			ko00000,ko00001,ko00002,ko02000	3.A.1.5,3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25			Bacteria	1TP4R@1239,3FCB7@33958,4HDIR@91061,COG1173@1,COG1173@2	NA|NA|NA	P	Binding-protein-dependent transport system inner membrane component
PAKBJLMI_00941	272621.LBA1303	2.5e-175	621.3	Lactobacillaceae	oppB			ko:K02033,ko:K02034,ko:K13894	ko02010,ko02024,map02010,map02024	M00239,M00349			ko00000,ko00001,ko00002,ko02000	3.A.1.5,3.A.1.5.21,3.A.1.5.24			Bacteria	1TP1S@1239,3FCCU@33958,4HATR@91061,COG0601@1,COG0601@2	NA|NA|NA	P	ABC transporter permease
PAKBJLMI_00942	272621.LBA1305	6.1e-177	626.7	Lactobacillaceae	oppF	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944		ko:K02032,ko:K10823,ko:K12372,ko:K13892	ko01501,ko02010,ko02024,map01501,map02010,map02024	M00239,M00324,M00348,M00439			ko00000,ko00001,ko00002,ko02000	3.A.1.5,3.A.1.5.1,3.A.1.5.11,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25			Bacteria	1V36J@1239,3F4GM@33958,4H9YB@91061,COG4608@1,COG4608@2	NA|NA|NA	P	Belongs to the ABC transporter superfamily
PAKBJLMI_00943	272621.LBA1306	2.5e-197	694.5	Lactobacillaceae	oppD	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944		ko:K02031,ko:K02032,ko:K15583	ko01501,ko02010,ko02024,map01501,map02010,map02024	M00239,M00439			ko00000,ko00001,ko00002,ko02000	3.A.1.5,3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25			Bacteria	1TP6E@1239,3F41T@33958,4HA4E@91061,COG0444@1,COG0444@2	NA|NA|NA	P	Belongs to the ABC transporter superfamily
PAKBJLMI_00944	272621.LBA1307	5.7e-36	156.4	Lactobacillaceae	acpP	GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509		ko:K02078					ko00000,ko00001				Bacteria	1VEE3@1239,3F7F4@33958,4HNQ0@91061,COG0236@1,COG0236@2	NA|NA|NA	IQ	Carrier of the growing fatty acid chain in fatty acid biosynthesis
PAKBJLMI_00945	272621.LBA1308	3.7e-182	644.0	Lactobacillaceae	plsX	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464	2.3.1.15	ko:K03621	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	M00089	R00851,R09380	RC00004,RC00039,RC00041	ko00000,ko00001,ko00002,ko01000,ko01004				Bacteria	1TPXS@1239,3F4N9@33958,4HA0R@91061,COG0416@1,COG0416@2	NA|NA|NA	I	Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
PAKBJLMI_00946	272621.LBA1309	0.0	1333.9	Lactobacillaceae	recG	GO:0003674,GO:0003678,GO:0003724,GO:0003824,GO:0004003,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006725,GO:0006807,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0008186,GO:0009314,GO:0009379,GO:0009628,GO:0009987,GO:0010501,GO:0016020,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032392,GO:0032508,GO:0032991,GO:0033202,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048476,GO:0050896,GO:0051276,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0140097,GO:0140098,GO:1901360,GO:1902494	3.6.4.12	ko:K03655	ko03440,map03440				ko00000,ko00001,ko01000,ko03400				Bacteria	1TQ6I@1239,3F3JW@33958,4HAWN@91061,COG1200@1,COG1200@2	NA|NA|NA	L	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
PAKBJLMI_00947	272621.LBA1310	2.4e-306	1057.4	Lactobacillaceae	yloV			ko:K07030					ko00000				Bacteria	1TQMX@1239,3F3X0@33958,4HBSE@91061,COG1461@1,COG1461@2	NA|NA|NA	S	DAK2 domain fusion protein YloV
PAKBJLMI_00948	1423748.BALB01000011_gene1141	6.8e-57	226.5	Lactobacillaceae	asp												Bacteria	1V731@1239,3F72W@33958,4HIS4@91061,COG1302@1,COG1302@2	NA|NA|NA	S	Asp23 family, cell envelope-related function
PAKBJLMI_00949	272621.LBA1312	3.7e-27	126.7	Lactobacillaceae	rpmB	GO:0003674,GO:0003735,GO:0005198		ko:K02902	ko03010,map03010	M00178			br01610,ko00000,ko00001,ko00002,ko03011				Bacteria	1VEI2@1239,3F7ZN@33958,4HNIK@91061,COG0227@1,COG0227@2	NA|NA|NA	J	Belongs to the bacterial ribosomal protein bL28 family
PAKBJLMI_00950	272621.LBA1313	4.2e-52	210.3	Lactobacillaceae													Bacteria	1U65W@1239,2AE84@1,31424@2,3F756@33958,4IFVX@91061	NA|NA|NA		
PAKBJLMI_00951	272621.LBA1314	6.9e-127	459.9	Lactobacillaceae	thiN		2.7.6.2	ko:K00949	ko00730,ko01100,map00730,map01100		R00619	RC00002,RC00017	ko00000,ko00001,ko01000				Bacteria	1VA0W@1239,3F4N8@33958,4HHS1@91061,COG1564@1,COG1564@2	NA|NA|NA	H	thiamine pyrophosphokinase
PAKBJLMI_00952	272621.LBA1315	4.5e-120	437.2	Lactobacillaceae	rpe		5.1.3.1	ko:K01783	ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230	M00004,M00007	R01529	RC00540	ko00000,ko00001,ko00002,ko01000				Bacteria	1TQK8@1239,3F4KX@33958,4H9RW@91061,COG0036@1,COG0036@2	NA|NA|NA	G	Belongs to the ribulose-phosphate 3-epimerase family
PAKBJLMI_00953	272621.LBA1316	8e-168	596.3	Lactobacillaceae	rsgA		3.1.3.100	ko:K06949	ko00730,ko01100,map00730,map01100		R00615,R02135	RC00002,RC00017	ko00000,ko00001,ko01000,ko03009				Bacteria	1TPSQ@1239,3F3XH@33958,4HA9W@91061,COG1162@1,COG1162@2	NA|NA|NA	S	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
PAKBJLMI_00954	272621.LBA1317	0.0	1171.0	Lactobacillaceae													Bacteria	1TP3F@1239,3F4G6@33958,4H9KD@91061,COG0515@1,COG0515@2	NA|NA|NA	KLT	serine threonine protein kinase
PAKBJLMI_00955	272621.LBA1318	2.3e-139	501.5	Lactobacillaceae	stp		3.1.3.16	ko:K20074					ko00000,ko01000,ko01009				Bacteria	1V6K5@1239,3F4UI@33958,4HCDR@91061,COG0631@1,COG0631@2	NA|NA|NA	T	phosphatase
PAKBJLMI_00956	272621.LBA1319	1.3e-246	858.6	Lactobacillaceae	sun	GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008173,GO:0008649,GO:0008757,GO:0009383,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0030312,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0140098,GO:0140102,GO:1901360	2.1.1.176	ko:K03500					ko00000,ko01000,ko03009				Bacteria	1TP3N@1239,3F45F@33958,4HBQ6@91061,COG0144@1,COG0144@2,COG0781@1,COG0781@2	NA|NA|NA	J	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
PAKBJLMI_00957	272621.LBA1321	1.9e-172	611.7	Lactobacillaceae	fmt	GO:0003674,GO:0003824,GO:0004479,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006464,GO:0006518,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043043,GO:0043170,GO:0043412,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576	2.1.2.9	ko:K00604	ko00670,ko00970,map00670,map00970		R03940	RC00026,RC00165	ko00000,ko00001,ko01000			iSB619.SA_RS06010	Bacteria	1TQ32@1239,3F4N7@33958,4HART@91061,COG0223@1,COG0223@2	NA|NA|NA	J	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
PAKBJLMI_00958	272621.LBA1323	0.0	1576.2	Lactobacillaceae	priA	GO:0003674,GO:0003678,GO:0003824,GO:0004003,GO:0004386,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006268,GO:0006270,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032392,GO:0032508,GO:0033554,GO:0034641,GO:0034645,GO:0042623,GO:0043138,GO:0043140,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0046483,GO:0050896,GO:0051276,GO:0051716,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360,GO:1901576		ko:K04066	ko03440,map03440				ko00000,ko00001,ko01000,ko03400				Bacteria	1TNYB@1239,3F3N8@33958,4H9WW@91061,COG1198@1,COG1198@2	NA|NA|NA	L	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
PAKBJLMI_00959	272621.LBA1324	1.1e-33	148.7	Lactobacillaceae	rpoZ	GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0030312,GO:0030880,GO:0032774,GO:0032991,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0040007,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0061695,GO:0071704,GO:0071944,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234	2.7.7.6	ko:K03060	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	M00183	R00435,R00441,R00442,R00443	RC02795	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400				Bacteria	1VK74@1239,3F81N@33958,4HNHS@91061,COG1758@1,COG1758@2	NA|NA|NA	K	Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
PAKBJLMI_00960	272621.LBA1325	1.5e-112	412.1	Lactobacillaceae	gmk	GO:0003674,GO:0003824,GO:0004385,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009150,GO:0009161,GO:0009165,GO:0009167,GO:0009179,GO:0009185,GO:0009259,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042278,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046483,GO:0046710,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657	2.7.4.8,4.1.1.23	ko:K00942,ko:K01591	ko00230,ko00240,ko01100,map00230,map00240,map01100	M00050,M00051	R00332,R00965,R02090	RC00002,RC00409	ko00000,ko00001,ko00002,ko01000			iAPECO1_1312.APECO1_2813,iIT341.HP0321,iPC815.YPO0040,iSBO_1134.SBO_3729,iSFV_1184.SFV_3881,iSFxv_1172.SFxv_4016,iUTI89_1310.UTI89_C4193,iYO844.BSU15680	Bacteria	1TP0M@1239,3F3X9@33958,4HAYW@91061,COG0194@1,COG0194@2	NA|NA|NA	F	Essential for recycling GMP and indirectly, cGMP
PAKBJLMI_00961	272621.LBA1326	1.8e-80	305.1	Lactobacillaceae			6.3.3.2	ko:K01934	ko00670,ko01100,map00670,map01100		R02301	RC00183	ko00000,ko00001,ko01000				Bacteria	1V6S0@1239,3F7EV@33958,4HKKR@91061,COG4405@1,COG4405@2	NA|NA|NA	S	ASCH
PAKBJLMI_00962	272621.LBA1327	4.7e-310	1069.7	Lactobacillaceae	recN	GO:0000724,GO:0000725,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0008152,GO:0009295,GO:0009314,GO:0009432,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0030312,GO:0031668,GO:0033554,GO:0034641,GO:0042802,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043590,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071496,GO:0071704,GO:0071944,GO:0090304,GO:1901360		ko:K03631,ko:K13582	ko04112,map04112				ko00000,ko00001,ko03400				Bacteria	1TP99@1239,3F43U@33958,4H9ZR@91061,COG0497@1,COG0497@2	NA|NA|NA	L	May be involved in recombinational repair of damaged DNA
PAKBJLMI_00963	272621.LBA1328	3.5e-154	550.8	Lactobacillaceae	rrmJ		2.1.1.226,2.1.1.227	ko:K06442					ko00000,ko01000,ko03009				Bacteria	1TPE4@1239,3F45T@33958,4HAPY@91061,COG1189@1,COG1189@2	NA|NA|NA	J	Ribosomal RNA large subunit methyltransferase J
PAKBJLMI_00964	272621.LBA1329	6e-160	570.1	Lactobacillaceae	ispA	GO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044464,GO:0071704,GO:1901576	2.5.1.1,2.5.1.10,2.5.1.29,2.5.1.90	ko:K00795,ko:K02523,ko:K13789	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	M00364,M00366	R01658,R02003,R02061,R09248	RC00279	ko00000,ko00001,ko00002,ko01000,ko01006				Bacteria	1TPQY@1239,3F436@33958,4HA8E@91061,COG0142@1,COG0142@2	NA|NA|NA	H	Belongs to the FPP GGPP synthase family
PAKBJLMI_00965	272621.LBA1330	3.4e-36	157.1	Lactobacillaceae	xseB		3.1.11.6	ko:K03602	ko03430,map03430				ko00000,ko00001,ko01000,ko03400				Bacteria	1VK9I@1239,3F81K@33958,4HNRB@91061,COG1722@1,COG1722@2	NA|NA|NA	L	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PAKBJLMI_00966	272621.LBA1331	7.3e-213	746.5	Lactobacillaceae	xseA		3.1.11.6	ko:K03601	ko03430,map03430				ko00000,ko00001,ko01000,ko03400				Bacteria	1TP4E@1239,3F4RE@33958,4HAN2@91061,COG1570@1,COG1570@2	NA|NA|NA	L	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PAKBJLMI_00967	272621.LBA1332	1.9e-155	555.1	Lactobacillaceae	folD	GO:0003674,GO:0003824,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0019238,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114	1.5.1.5,3.5.4.9	ko:K01491	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	M00140,M00377	R01220,R01655	RC00202,RC00578	ko00000,ko00001,ko00002,ko01000				Bacteria	1TP1P@1239,3F46A@33958,4H9Q6@91061,COG0190@1,COG0190@2	NA|NA|NA	F	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
PAKBJLMI_00968	272621.LBA1333	3.6e-64	250.8	Lactobacillaceae	nusB			ko:K03625					ko00000,ko03009,ko03021				Bacteria	1VA9B@1239,3F7KW@33958,4HKMU@91061,COG0781@1,COG0781@2	NA|NA|NA	K	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
PAKBJLMI_00969	272621.LBA1334	6.8e-72	276.6	Lactobacillaceae	yqhY			ko:K10947					ko00000,ko03000				Bacteria	1V4IC@1239,3F71X@33958,4HJ7T@91061,COG1302@1,COG1302@2	NA|NA|NA	S	Asp23 family, cell envelope-related function
PAKBJLMI_00970	272621.LBA1335	6.3e-102	376.7	Lactobacillaceae	efp	GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576		ko:K02356					ko00000,ko03012				Bacteria	1TR8P@1239,3F422@33958,4H9YX@91061,COG0231@1,COG0231@2	NA|NA|NA	J	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PAKBJLMI_00971	272621.LBA1336	3.2e-198	697.6	Lactobacillaceae	pepP		3.4.11.9,3.4.13.9	ko:K01262,ko:K01271					ko00000,ko01000,ko01002				Bacteria	1TQ44@1239,3F4DR@33958,4HAT7@91061,COG0006@1,COG0006@2	NA|NA|NA	E	Creatinase/Prolidase N-terminal domain
PAKBJLMI_00972	272621.LBA1337	1.7e-47	194.9	Lactobacillaceae	rpmA	GO:0000027,GO:0001558,GO:0003674,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0030312,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0040008,GO:0042254,GO:0042255,GO:0042256,GO:0042273,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044877,GO:0048518,GO:0050789,GO:0050794,GO:0051128,GO:0065003,GO:0065007,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0090069,GO:0090070,GO:1901564,GO:1901566,GO:1901576,GO:1902626,GO:1990904		ko:K02899	ko03010,map03010	M00178			br01610,ko00000,ko00001,ko00002,ko03011				Bacteria	1V6HW@1239,3F6WU@33958,4HIMN@91061,COG0211@1,COG0211@2	NA|NA|NA	J	Belongs to the bacterial ribosomal protein bL27 family
PAKBJLMI_00973	272621.LBA1338	4.5e-49	200.3	Lactobacillaceae	rplU	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904		ko:K02888	ko03010,map03010	M00178			br01610,ko00000,ko00001,ko00002,ko03011				Bacteria	1V9YH@1239,3F6WT@33958,4HIGK@91061,COG0261@1,COG0261@2	NA|NA|NA	J	This protein binds to 23S rRNA in the presence of protein L20
PAKBJLMI_00974	272621.LBA1339	2e-149	535.0	Lactobacillaceae													Bacteria	1TWZ5@1239,3F54A@33958,4HD8R@91061,COG1284@1,COG1284@2	NA|NA|NA	S	Uncharacterised 5xTM membrane BCR, YitT family COG1284
PAKBJLMI_00975	272621.LBA1340	6.8e-259	899.4	Lactobacillaceae													Bacteria	1VK4A@1239,2EM25@1,33ERN@2,3F53P@33958,4HRGD@91061	NA|NA|NA	S	Uncharacterized protein conserved in bacteria (DUF2325)
PAKBJLMI_00976	272621.LBA1341	1.8e-200	704.9	Lactobacillaceae	ilvE		2.6.1.42	ko:K00826	ko00270,ko00280,ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00270,map00280,map00290,map00770,map01100,map01110,map01130,map01210,map01230	M00019,M00036,M00119,M00570	R01090,R01214,R02199,R10991	RC00006,RC00036	ko00000,ko00001,ko00002,ko01000,ko01007				Bacteria	1TQQI@1239,3F4BD@33958,4HASX@91061,COG0115@1,COG0115@2	NA|NA|NA	E	Branched-chain amino acid aminotransferase
PAKBJLMI_00977	1033837.WANG_0371	2.1e-27	127.5	Lactobacillaceae	dmpI	GO:0003674,GO:0003824,GO:0006725,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0044237	5.3.2.6	ko:K01821	ko00362,ko00621,ko00622,ko01100,ko01120,ko01220,map00362,map00621,map00622,map01100,map01120,map01220	M00569	R03966,R05389	RC01040,RC01355	ko00000,ko00001,ko00002,ko01000				Bacteria	1VKD5@1239,3F83T@33958,4HRBS@91061,COG1942@1,COG1942@2	NA|NA|NA	G	Belongs to the 4-oxalocrotonate tautomerase family
PAKBJLMI_00978	272621.LBA1343	1.3e-105	389.0	Lactobacillaceae													Bacteria	1TQQ0@1239,3F4D3@33958,4HDKW@91061,COG1228@1,COG1228@2	NA|NA|NA	Q	Imidazolonepropionase and related amidohydrolases
PAKBJLMI_00979	272621.LBA1344	3.2e-109	401.0	Lactobacillaceae													Bacteria	1TQQ0@1239,3F4D3@33958,4HDKW@91061,COG1228@1,COG1228@2	NA|NA|NA	Q	Imidazolonepropionase and related amidohydrolases
PAKBJLMI_00981	272621.LBA1346	6.7e-60	236.5	Lactobacillaceae	oppA			ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	M00239,M00439			ko00000,ko00001,ko00002,ko02000	3.A.1.5,3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25			Bacteria	1TNYQ@1239,3F5SJ@33958,4HAMK@91061,COG4166@1,COG4166@2	NA|NA|NA	E	ABC transporter
PAKBJLMI_00982	272621.LBA1347	9.2e-98	362.8	Lactobacillaceae				ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	M00239,M00439			ko00000,ko00001,ko00002,ko02000	3.A.1.5,3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25			Bacteria	1TNYQ@1239,3F5SJ@33958,4HAMK@91061,COG4166@1,COG4166@2	NA|NA|NA	E	ABC transporter
PAKBJLMI_00983	272621.LBA1348	3.7e-153	547.4	Lactobacillaceae	neo		2.7.1.87,2.7.1.95	ko:K00897,ko:K10673,ko:K19272,ko:K19299,ko:K19300		M00766			br01600,ko00000,ko00002,ko01000,ko01504				Bacteria	1V8IB@1239,3F5UF@33958,4HM0T@91061,COG3231@1,COG3231@2	NA|NA|NA	F	Belongs to the aminoglycoside phosphotransferase family
PAKBJLMI_00984	272621.LBA1349	5e-311	1073.2	Lactobacillaceae													Bacteria	1TS3Q@1239,3F4AT@33958,4HF7D@91061,COG4907@1,COG4907@2	NA|NA|NA	S	Predicted membrane protein (DUF2207)
PAKBJLMI_00985	272621.LBA1350	3.6e-154	550.8	Lactobacillaceae	cinI			ko:K06889					ko00000				Bacteria	1V3U9@1239,3F5VU@33958,4HKRG@91061,COG1073@1,COG1073@2	NA|NA|NA	S	Serine hydrolase (FSH1)
PAKBJLMI_00986	1033837.WANG_0368	2e-185	655.2	Lactobacillaceae				ko:K07273					ko00000				Bacteria	1VF8D@1239,3F4U9@33958,4HX0U@91061,COG3757@1,COG3757@2	NA|NA|NA	M	Glycosyl hydrolases family 25
PAKBJLMI_00988	272621.LBA1353	1.7e-165	588.6	Lactobacillaceae				ko:K07149					ko00000				Bacteria	1V7I4@1239,3F59G@33958,4HJ3U@91061,COG2364@1,COG2364@2	NA|NA|NA	S	Membrane
PAKBJLMI_00989	272621.LBA1355	6.5e-178	629.8	Lactobacillaceae													Bacteria	1V2AW@1239,3F3N7@33958,4HU2V@91061,COG0657@1,COG0657@2	NA|NA|NA	I	Carboxylesterase family
PAKBJLMI_00990	272621.LBA1356	1e-65	255.8	Lactobacillaceae	arsC		1.20.4.1	ko:K00537,ko:K16509					ko00000,ko01000				Bacteria	1VA5Q@1239,3F72U@33958,4HKQQ@91061,COG1393@1,COG1393@2	NA|NA|NA	P	Belongs to the ArsC family
PAKBJLMI_00991	272621.LBA1357	5.2e-295	1019.6	Lactobacillaceae													Bacteria	1TSRV@1239,3F46B@33958,4HCIZ@91061,COG1132@1,COG1132@2	NA|NA|NA	V	ABC-type multidrug transport system, ATPase and permease components
PAKBJLMI_00992	272621.LBA1358	8.5e-290	1002.3	Lactobacillaceae													Bacteria	1TSRV@1239,3F46B@33958,4HCIZ@91061,COG1132@1,COG1132@2	NA|NA|NA	V	ABC-type multidrug transport system, ATPase and permease components
PAKBJLMI_00993	272621.LBA1359	1.5e-152	545.4	Lactobacillaceae													Bacteria	1UYU8@1239,3F3YK@33958,4HE0K@91061,COG0561@1,COG0561@2	NA|NA|NA	S	haloacid dehalogenase-like hydrolase
PAKBJLMI_00994	525365.HMPREF0548_0801	8.1e-253	879.8	Lactobacillaceae													Bacteria	1U590@1239,29NN0@1,309JY@2,3F574@33958,4IF0B@91061	NA|NA|NA		
PAKBJLMI_00995	272621.LBA1364	0.0	1431.4	Lactobacillaceae	lacA		3.2.1.23	ko:K12308	ko00052,map00052		R01105	RC00452	ko00000,ko00001,ko01000				Bacteria	1TQN6@1239,3F3PC@33958,4HARI@91061,COG1874@1,COG1874@2	NA|NA|NA	G	-beta-galactosidase
PAKBJLMI_00996	272621.LBA1365	0.0	1592.4	Lactobacillaceae	yic1		3.2.1.177	ko:K01811					ko00000,ko01000		GH31		Bacteria	1TR8N@1239,3F4CE@33958,4HB1D@91061,COG1501@1,COG1501@2	NA|NA|NA	G	Belongs to the glycosyl hydrolase 31 family
PAKBJLMI_00997	272621.LBA1366	7.7e-309	1065.4	Lactobacillaceae			3.2.1.86	ko:K01223	ko00010,ko00500,map00010,map00500		R00839,R05133,R05134	RC00049,RC00171,RC00714	ko00000,ko00001,ko01000		GT1		Bacteria	1TP19@1239,3FC7B@33958,4H9KU@91061,COG2723@1,COG2723@2	NA|NA|NA	G	Belongs to the glycosyl hydrolase 1 family
PAKBJLMI_00998	272621.LBA1367	1.1e-166	592.4	Lactobacillaceae	bglK		2.7.1.2,2.7.1.85	ko:K00845,ko:K18673	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	M00001,M00549	R00299,R01600,R01786	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000				Bacteria	1TRUZ@1239,3F97Z@33958,4HGU5@91061,COG1940@1,COG1940@2	NA|NA|NA	GK	ROK family
PAKBJLMI_00999	272621.LBA1368	7.3e-206	723.0	Lactobacillaceae	xylR												Bacteria	1TQCE@1239,3F540@33958,4HDE3@91061,COG1940@1,COG1940@2	NA|NA|NA	GK	ROK family
PAKBJLMI_01000	272621.LBA1369	1.1e-236	825.5	Lactobacillaceae				ko:K02761	ko00500,ko02060,map00500,map02060	M00275	R11170,R11172	RC00017,RC03206	ko00000,ko00001,ko00002,ko02000	4.A.3.2			Bacteria	1TP8D@1239,3F54Z@33958,4H9W2@91061,COG1455@1,COG1455@2	NA|NA|NA	G	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PAKBJLMI_01001	272621.LBA1370	6.4e-100	370.2	Lactobacillaceae													Bacteria	1VMSZ@1239,2DF54@1,32U4N@2,3F6U1@33958,4HSRG@91061	NA|NA|NA	S	Bacterial PH domain
PAKBJLMI_01002	1423748.BALB01000027_gene1823	3.4e-16	90.5	Lactobacillaceae													Bacteria	1U6HV@1239,2BSF5@1,32MH9@2,3F7Y7@33958,4IGA6@91061	NA|NA|NA		
PAKBJLMI_01003	272621.LBA1371	4.2e-65	253.8	Lactobacillaceae	ps301												Bacteria	1UI92@1239,3FBT2@33958,4ISGI@91061,COG2944@1,COG2944@2	NA|NA|NA	K	sequence-specific DNA binding
PAKBJLMI_01004	272621.LBA1372	2.3e-47	194.5	Lactobacillaceae													Bacteria	1VQGF@1239,2ES6D@1,33JR5@2,3F76A@33958,4HSAN@91061	NA|NA|NA	S	Motility quorum-sensing regulator, toxin of MqsA
PAKBJLMI_01005	272621.LBA1373	0.0	1629.4	Lactobacillaceae	pepX		3.4.14.11	ko:K01281					ko00000,ko01000,ko01002				Bacteria	1TT78@1239,3FCF2@33958,4IRQ0@91061,COG2936@1,COG2936@2	NA|NA|NA	E	Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
PAKBJLMI_01006	272621.LBA1374	8.1e-81	306.2	Lactobacillaceae	msrB		1.8.4.11,1.8.4.12	ko:K07305,ko:K12267					ko00000,ko01000				Bacteria	1UPN0@1239,3F6H4@33958,4HGWN@91061,COG0229@1,COG0229@2	NA|NA|NA	O	peptide methionine sulfoxide reductase
PAKBJLMI_01007	272621.LBA1375	4.9e-47	193.4	Lactobacillaceae													Bacteria	1U63R@1239,2DKNK@1,30A2I@2,3F6YT@33958,4IFT6@91061	NA|NA|NA		
PAKBJLMI_01008	272621.LBA1376	6.6e-151	540.0	Lactobacillaceae	glcU			ko:K05340					ko00000,ko02000	2.A.7.5			Bacteria	1TQBN@1239,3F4K2@33958,4HAVH@91061,COG4975@1,COG4975@2	NA|NA|NA	U	sugar transport
PAKBJLMI_01009	272621.LBA1377	0.0	1766.5	Firmicutes													Bacteria	1V8N3@1239,29WY6@1,30IKC@2	NA|NA|NA		
PAKBJLMI_01011	272621.LBA1379	0.0	2097.0	Lactobacillaceae	carB	GO:0000050,GO:0003674,GO:0003824,GO:0004087,GO:0004088,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016884,GO:0019627,GO:0019752,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	6.3.5.5	ko:K01955	ko00240,ko00250,ko01100,map00240,map00250,map01100	M00051	R00256,R00575,R01395,R10948,R10949	RC00002,RC00010,RC00043,RC02750,RC02798,RC03314	ko00000,ko00001,ko00002,ko01000				Bacteria	1TPID@1239,3F3MD@33958,4HAEY@91061,COG0458@1,COG0458@2	NA|NA|NA	F	Carbamoyl-phosphate synthase
PAKBJLMI_01012	272621.LBA1380	7.1e-211	739.6	Lactobacillaceae	carA	GO:0000050,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005951,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0019627,GO:0019752,GO:0032991,GO:0034641,GO:0040007,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494	6.3.5.5	ko:K01955,ko:K01956	ko00240,ko00250,ko01100,map00240,map00250,map01100	M00051	R00256,R00575,R01395,R10948,R10949	RC00002,RC00010,RC00043,RC02750,RC02798,RC03314	ko00000,ko00001,ko00002,ko01000			iNJ661.Rv1383,iYO844.BSU15510	Bacteria	1TQ8N@1239,3F43R@33958,4H9Z0@91061,COG0505@1,COG0505@2	NA|NA|NA	F	Carbamoyl-phosphate synthetase glutamine chain
PAKBJLMI_01013	272621.LBA1381	1e-150	539.3	Lactobacillaceae	pyrC	GO:0003674,GO:0003824,GO:0004038,GO:0004151,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006144,GO:0006145,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016787,GO:0016810,GO:0016812,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0040007,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046113,GO:0046390,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576	3.5.2.3	ko:K01465	ko00240,ko01100,map00240,map01100	M00051	R01993	RC00632	ko00000,ko00001,ko00002,ko01000				Bacteria	1TPQM@1239,3F3S3@33958,4HA90@91061,COG0044@1,COG0044@2	NA|NA|NA	F	Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
PAKBJLMI_01014	272621.LBA1381	5.5e-55	220.3	Lactobacillaceae	pyrC	GO:0003674,GO:0003824,GO:0004038,GO:0004151,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006144,GO:0006145,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016787,GO:0016810,GO:0016812,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0040007,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046113,GO:0046390,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576	3.5.2.3	ko:K01465	ko00240,ko01100,map00240,map01100	M00051	R01993	RC00632	ko00000,ko00001,ko00002,ko01000				Bacteria	1TPQM@1239,3F3S3@33958,4HA90@91061,COG0044@1,COG0044@2	NA|NA|NA	F	Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
PAKBJLMI_01015	272621.LBA1382	8.5e-184	649.4	Lactobacillaceae	pyrB	GO:0003674,GO:0003824,GO:0004070,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016020,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0030312,GO:0034641,GO:0034654,GO:0040007,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0071944,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	2.1.3.2	ko:K00608,ko:K00609	ko00240,ko00250,ko01100,map00240,map00250,map01100	M00051	R01397	RC00064,RC02850	ko00000,ko00001,ko00002,ko01000			iYO844.BSU15490	Bacteria	1TQ96@1239,3F4BQ@33958,4H9M6@91061,COG0540@1,COG0540@2	NA|NA|NA	F	Belongs to the ATCase OTCase family
PAKBJLMI_01016	272621.LBA1383	1.4e-95	355.5	Lactobacillaceae	pyrR	GO:0003674,GO:0003700,GO:0003824,GO:0004845,GO:0005575,GO:0005618,GO:0005623,GO:0006139,GO:0006220,GO:0006221,GO:0006355,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008655,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019637,GO:0019693,GO:0030312,GO:0031323,GO:0031326,GO:0034641,GO:0034654,GO:0043094,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044464,GO:0046390,GO:0046483,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0055086,GO:0060255,GO:0065007,GO:0071704,GO:0071944,GO:0072527,GO:0072528,GO:0080090,GO:0090407,GO:0140110,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1903506,GO:2000112,GO:2001141	2.4.2.9	ko:K02825	ko00240,ko01100,map00240,map01100		R00966	RC00063	ko00000,ko00001,ko01000,ko03000			iHN637.CLJU_RS05275	Bacteria	1V3GV@1239,3F4SR@33958,4HGYE@91061,COG2065@1,COG2065@2	NA|NA|NA	F	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
PAKBJLMI_01017	272621.LBA1384	3.3e-26	123.6	Lactobacillaceae	pyrD	GO:0003674,GO:0003824,GO:0004152,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016627,GO:0016635,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019856,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046112,GO:0046390,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	1.3.1.14,1.3.98.1	ko:K00226,ko:K02823,ko:K17828	ko00240,ko01100,map00240,map01100	M00051	R01867,R01869	RC00051	ko00000,ko00001,ko00002,ko01000			iYO844.BSU15540	Bacteria	1TPFV@1239,3F4PJ@33958,4HA5H@91061,COG0167@1,COG0167@2	NA|NA|NA	F	Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
PAKBJLMI_01018	272621.LBA1384	3.6e-129	467.6	Lactobacillaceae	pyrD	GO:0003674,GO:0003824,GO:0004152,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016627,GO:0016635,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019856,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046112,GO:0046390,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	1.3.1.14,1.3.98.1	ko:K00226,ko:K02823,ko:K17828	ko00240,ko01100,map00240,map01100	M00051	R01867,R01869	RC00051	ko00000,ko00001,ko00002,ko01000			iYO844.BSU15540	Bacteria	1TPFV@1239,3F4PJ@33958,4HA5H@91061,COG0167@1,COG0167@2	NA|NA|NA	F	Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
PAKBJLMI_01019	272621.LBA1386	1.5e-129	468.8	Lactobacillaceae	pyrF	GO:0003674,GO:0003824,GO:0004590,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0015949,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019856,GO:0034641,GO:0034654,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046112,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	4.1.1.23	ko:K01591	ko00240,ko01100,map00240,map01100	M00051	R00965	RC00409	ko00000,ko00001,ko00002,ko01000			iECO103_1326.ECO103_1444,iECSF_1327.ECSF_1264,iSFV_1184.SFV_1294,iSF_1195.SF1285,iSFxv_1172.SFxv_1457,iS_1188.S1368,ic_1306.c1750	Bacteria	1TPPH@1239,3F47Y@33958,4HAJ2@91061,COG0284@1,COG0284@2	NA|NA|NA	F	Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
PAKBJLMI_01020	272621.LBA1387	9.2e-118	429.5	Lactobacillaceae	pyrE		2.4.2.10,4.1.1.23	ko:K00762,ko:K01591,ko:K13421	ko00240,ko00983,ko01100,map00240,map00983,map01100	M00051	R00965,R01870,R08231	RC00063,RC00409,RC00611	ko00000,ko00001,ko00002,ko01000			iYO844.BSU15560	Bacteria	1V1BZ@1239,3F487@33958,4HFV7@91061,COG0461@1,COG0461@2	NA|NA|NA	F	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
PAKBJLMI_01021	272621.LBA1388	1.2e-117	429.1	Lactobacillaceae													Bacteria	1UJSC@1239,3F4ZZ@33958,4HCVT@91061,COG0702@1,COG0702@2	NA|NA|NA	GM	NmrA-like family
PAKBJLMI_01022	272621.LBA1389	0.0	1632.5	Lactobacillaceae			3.6.3.8	ko:K01537					ko00000,ko01000	3.A.3.2			Bacteria	1TPF5@1239,3F3KP@33958,4H9S5@91061,COG0474@1,COG0474@2	NA|NA|NA	P	P-type ATPase
PAKBJLMI_01023	272621.LBA1390	1.8e-248	864.8	Lactobacillaceae	clcA	GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0006821,GO:0008150,GO:0008324,GO:0015075,GO:0015077,GO:0015078,GO:0015291,GO:0015297,GO:0015298,GO:0015299,GO:0015318,GO:0015672,GO:0015698,GO:0015706,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0022890,GO:0031224,GO:0031226,GO:0031404,GO:0034220,GO:0042802,GO:0043167,GO:0043168,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071705,GO:0071944,GO:0098655,GO:0098660,GO:0098662,GO:1902600		ko:K03281					ko00000	2.A.49		iAF1260.b0155,iB21_1397.B21_00153,iBWG_1329.BWG_0148,iE2348C_1286.E2348C_0162,iEC042_1314.EC042_0155,iEC55989_1330.EC55989_0149,iECBD_1354.ECBD_3463,iECDH10B_1368.ECDH10B_0135,iECDH1ME8569_1439.ECDH1ME8569_0149,iECD_1391.ECD_00154,iECIAI1_1343.ECIAI1_0153,iECO103_1326.ECO103_0155,iECSE_1348.ECSE_0156,iECUMN_1333.ECUMN_0152,iECW_1372.ECW_m0152,iEKO11_1354.EKO11_3761,iETEC_1333.ETEC_0151,iEcDH1_1363.EcDH1_3447,iEcE24377_1341.EcE24377A_0160,iEcolC_1368.EcolC_3504,iJO1366.b0155,iSSON_1240.SSON_0167,iUMNK88_1353.UMNK88_159,iWFL_1372.ECW_m0152,iY75_1357.Y75_RS00790,iZ_1308.Z0166	Bacteria	1TPX0@1239,3F587@33958,4HD2H@91061,COG0038@1,COG0038@2	NA|NA|NA	P	chloride
PAKBJLMI_01024	272621.LBA1391	5.2e-103	380.6	Lactobacillaceae													Bacteria	1U6CU@1239,3F7MF@33958,4IG4J@91061,COG5549@1,COG5549@2	NA|NA|NA	O	Matrixin
PAKBJLMI_01025	272621.LBA1392	0.0	7613.8	Lactobacillaceae													Bacteria	1VSP5@1239,3F4FY@33958,4HUK1@91061,COG3266@1,COG3266@2,COG4932@1,COG4932@2	NA|NA|NA	UW	LPXTG-motif cell wall anchor domain protein
PAKBJLMI_01026	272621.LBA1393	8.8e-95	352.8	Lactobacillaceae	wecD												Bacteria	1V5SA@1239,3FBU8@33958,4ISZX@91061,COG0454@1,COG0456@2	NA|NA|NA	K	acetyltransferase
PAKBJLMI_01027	272621.LBA1394	1e-50	205.7	Lactobacillaceae													Bacteria	1U62Q@1239,29P3D@1,30A1J@2,3F6W2@33958,4IFRV@91061	NA|NA|NA		
PAKBJLMI_01028	272621.LBA1395	1.5e-147	528.9	Lactobacillaceae	metQ2			ko:K02073	ko02010,map02010	M00238			ko00000,ko00001,ko00002,ko02000	3.A.1.24			Bacteria	1TQAS@1239,3F3WP@33958,4HCTA@91061,COG1464@1,COG1464@2	NA|NA|NA	P	Belongs to the nlpA lipoprotein family
PAKBJLMI_01029	272621.LBA1396	8.8e-47	192.6	Lactobacillaceae													Bacteria	1VNIV@1239,2CE9Z@1,33CNB@2,3F7UX@33958,4HRR9@91061	NA|NA|NA		
PAKBJLMI_01030	272621.LBA1397	8.1e-125	453.0	Lactobacillaceae	sdaAB		4.3.1.17	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230		R00220,R00590	RC00331,RC02600	ko00000,ko00001,ko01000				Bacteria	1V8XQ@1239,3FC4T@33958,4HJWN@91061,COG1760@1,COG1760@2	NA|NA|NA	E	Serine dehydratase beta chain
PAKBJLMI_01031	272621.LBA1398	9e-156	556.2	Lactobacillaceae	sdaAA		4.3.1.17	ko:K01752	ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230		R00220,R00590	RC00331,RC02600	ko00000,ko00001,ko01000				Bacteria	1TP79@1239,3F3X8@33958,4HAI1@91061,COG1760@1,COG1760@2	NA|NA|NA	E	L-serine dehydratase, iron-sulfur-dependent, alpha subunit
PAKBJLMI_01032	272621.LBA1399	5.7e-52	209.9	Lactobacillaceae				ko:K02612	ko00360,ko01120,map00360,map01120		R09838	RC02690	ko00000,ko00001				Bacteria	1V9YV@1239,3F7D5@33958,4HKC6@91061,COG2151@1,COG2151@2	NA|NA|NA	S	Iron-sulfur cluster assembly protein
PAKBJLMI_01033	272621.LBA1400	0.0	1139.0	Lactobacillaceae	oppA			ko:K02035	ko02024,map02024	M00239			ko00000,ko00001,ko00002,ko02000	3.A.1.5			Bacteria	1TQ0N@1239,3F3KW@33958,4HARF@91061,COG0747@1,COG0747@2	NA|NA|NA	E	ABC transporter substrate-binding protein
PAKBJLMI_01035	272621.LBA1401	9.1e-264	915.6	Lactobacillaceae	npr		1.11.1.1	ko:K05910					ko00000,ko01000				Bacteria	1TPWW@1239,3F449@33958,4H9U7@91061,COG0446@1,COG0446@2	NA|NA|NA	C	NADH oxidase
PAKBJLMI_01036	272621.LBA1402	3.9e-62	243.8	Lactobacillaceae	yafQ	GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0005488,GO:0005575,GO:0006139,GO:0006401,GO:0006402,GO:0006412,GO:0006415,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010605,GO:0010629,GO:0016043,GO:0016070,GO:0016071,GO:0016787,GO:0016788,GO:0016892,GO:0016894,GO:0019222,GO:0019439,GO:0019538,GO:0022411,GO:0032984,GO:0032991,GO:0032993,GO:0034641,GO:0034645,GO:0034655,GO:0042221,GO:0042710,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043565,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044010,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044764,GO:0044877,GO:0046483,GO:0046677,GO:0046700,GO:0048519,GO:0050789,GO:0050896,GO:0051704,GO:0060255,GO:0065007,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576		ko:K19157					ko00000,ko01000,ko02048				Bacteria	1U6BU@1239,3F7JG@33958,4IG3F@91061,COG3041@1,COG3041@2	NA|NA|NA	S	Bacterial toxin of type II toxin-antitoxin system, YafQ
PAKBJLMI_01037	272621.LBA1403	4.6e-45	186.8	Lactobacillaceae	yefM		2.3.1.15	ko:K08591,ko:K19158,ko:K19159	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	M00089	R00851,R09380	RC00004,RC00039,RC00041	ko00000,ko00001,ko00002,ko01000,ko01004,ko02048				Bacteria	1U6CD@1239,3F7KJ@33958,4IG41@91061,COG2161@1,COG2161@2	NA|NA|NA	D	Antitoxin component of a toxin-antitoxin (TA) module
PAKBJLMI_01038	272621.LBA1404	1.5e-115	422.2	Lactobacillaceae	ylbE												Bacteria	1TQFS@1239,3F521@33958,4HDA2@91061,COG0702@1,COG0702@2	NA|NA|NA	GM	NAD(P)H-binding
PAKBJLMI_01039	272621.LBA1405	1.7e-57	228.4	Lactobacillaceae				ko:K07171					ko00000,ko01000,ko02048				Bacteria	1U5ST@1239,3F841@33958,4IEKF@91061,COG2337@1,COG2337@2	NA|NA|NA	T	PemK-like, MazF-like toxin of type II toxin-antitoxin system
PAKBJLMI_01040	272621.LBA1407	2.6e-64	251.1	Lactobacillaceae													Bacteria	1W0V5@1239,2DYG7@1,349JS@2,3FC0P@33958,4HYMX@91061	NA|NA|NA	S	ASCH domain
PAKBJLMI_01041	272621.LBA1408	1.1e-118	432.6	Lactobacillaceae													Bacteria	1TQC2@1239,3FCAT@33958,4HHUH@91061,COG4832@1,COG4832@2	NA|NA|NA	S	GyrI-like small molecule binding domain
PAKBJLMI_01043	272621.LBA1410	7.7e-160	569.7	Lactobacillaceae													Bacteria	1TQWY@1239,3F75S@33958,4HW0R@91061,COG0583@1,COG0583@2	NA|NA|NA	K	Bacterial regulatory helix-turn-helix protein, lysR family
PAKBJLMI_01044	272621.LBA1411	0.0	1397.1	Lactobacillaceae			1.3.5.4	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	M00009,M00011,M00150,M00173	R02164	RC00045	ko00000,ko00001,ko00002,ko01000				Bacteria	1UZEX@1239,3F9M2@33958,4HGSA@91061,COG1053@1,COG1053@2,COG3976@1,COG3976@2	NA|NA|NA	C	FMN_bind
PAKBJLMI_01047	272621.LBA1413	2e-208	731.5	Lactobacillaceae			2.7.7.65	ko:K20955	ko05111,map05111				ko00000,ko00001,ko01000				Bacteria	1V9Y7@1239,3FC2R@33958,4HQBN@91061,COG2199@1,COG3706@2	NA|NA|NA	T	GGDEF domain
PAKBJLMI_01048	272621.LBA1414	1e-130	472.6	Lactobacillaceae	yhjH	GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006355,GO:0008081,GO:0008134,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0016787,GO:0016788,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0032879,GO:0040012,GO:0040013,GO:0042578,GO:0043392,GO:0043433,GO:0044092,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051090,GO:0051098,GO:0051100,GO:0051101,GO:0051171,GO:0051252,GO:0051270,GO:0051271,GO:0060255,GO:0065007,GO:0065009,GO:0071111,GO:0080090,GO:1902021,GO:1902201,GO:1903506,GO:2000112,GO:2000145,GO:2000146,GO:2000677,GO:2000678,GO:2001141	3.1.4.52	ko:K21086	ko02026,map02026				ko00000,ko00001,ko01000				Bacteria	1W185@1239,3FC2S@33958,4HYC2@91061,COG2200@1,COG2200@2	NA|NA|NA	T	Putative diguanylate phosphodiesterase
PAKBJLMI_01049	272621.LBA1415	3.6e-143	514.2	Lactobacillaceae													Bacteria	1VM9X@1239,3F5AS@33958,4IF18@91061,COG2200@1,COG2200@2	NA|NA|NA	T	EAL domain
PAKBJLMI_01050	272621.LBA1416	1.5e-46	191.8	Lactobacillaceae	pgaC	GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0007155,GO:0008150,GO:0008194,GO:0008375,GO:0009987,GO:0016020,GO:0016740,GO:0016757,GO:0016758,GO:0022610,GO:0031589,GO:0042710,GO:0043708,GO:0044464,GO:0044764,GO:0051704,GO:0071944,GO:0090605		ko:K11936	ko02026,map02026				ko00000,ko00001,ko01000,ko01003,ko02000	4.D.1.1.2,4.D.1.1.3	GT2		Bacteria	1TR2P@1239,3F3RY@33958,4HAQN@91061,COG1215@1,COG1215@2	NA|NA|NA	M	Glycosyl transferase
PAKBJLMI_01051	272621.LBA1416	3.3e-183	647.5	Lactobacillaceae	pgaC	GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0007155,GO:0008150,GO:0008194,GO:0008375,GO:0009987,GO:0016020,GO:0016740,GO:0016757,GO:0016758,GO:0022610,GO:0031589,GO:0042710,GO:0043708,GO:0044464,GO:0044764,GO:0051704,GO:0071944,GO:0090605		ko:K11936	ko02026,map02026				ko00000,ko00001,ko01000,ko01003,ko02000	4.D.1.1.2,4.D.1.1.3	GT2		Bacteria	1TR2P@1239,3F3RY@33958,4HAQN@91061,COG1215@1,COG1215@2	NA|NA|NA	M	Glycosyl transferase
PAKBJLMI_01052	272621.LBA1417	1e-90	339.3	Lactobacillaceae													Bacteria	1VG2N@1239,2E4JE@1,32ZEG@2,3F6QS@33958,4HPPN@91061	NA|NA|NA		
PAKBJLMI_01053	272621.LBA1418	5.7e-177	626.7	Lactobacillaceae													Bacteria	1TPM6@1239,3F3UQ@33958,4HAS5@91061,COG1902@1,COG1902@2	NA|NA|NA	C	Oxidoreductase
PAKBJLMI_01054	748671.LCRIS_00547	8.1e-09	65.5	Lactobacillaceae				ko:K07496					ko00000				Bacteria	1TQAH@1239,3FBNH@33958,4IRBD@91061,COG0675@1,COG0675@2	NA|NA|NA	L	Probable transposase
PAKBJLMI_01055	272621.LBA1420	9.3e-214	749.2	Lactobacillaceae				ko:K07496					ko00000				Bacteria	1TQI8@1239,3F547@33958,4HI2X@91061,COG0675@1,COG0675@2	NA|NA|NA	L	TIGRFAM transposase, IS605 OrfB family
PAKBJLMI_01056	272621.LBA1421	6e-27	125.9	Lactobacillaceae													Bacteria	1U8A8@1239,3FARJ@33958,4II86@91061,COG1902@1,COG1902@2	NA|NA|NA	C	pentaerythritol trinitrate reductase activity
PAKBJLMI_01057	272621.LBA1422	4e-109	400.6	Lactobacillaceae	pncA	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006206,GO:0006208,GO:0006212,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009112,GO:0009987,GO:0017144,GO:0019860,GO:0034641,GO:0042737,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044424,GO:0044464,GO:0046113,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072527,GO:0072529,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575		ko:K16788					ko00000,ko02000	2.A.88.5		iSB619.SA_RS09955	Bacteria	1V1CY@1239,3F41F@33958,4HFRS@91061,COG1335@1,COG1335@2	NA|NA|NA	Q	Isochorismatase family
PAKBJLMI_01058	1423767.BALU01000009_gene486	2.9e-13	80.1	Lactobacillaceae													Bacteria	1U6XJ@1239,29PQS@1,30ANZ@2,3F8P5@33958,4IGRV@91061	NA|NA|NA		
PAKBJLMI_01059	272621.LBA1424	1.1e-278	965.3	Lactobacillaceae	yjeM	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944		ko:K20265	ko02024,map02024				ko00000,ko00001,ko02000	2.A.3.7.1,2.A.3.7.3			Bacteria	1TRFS@1239,3F4J0@33958,4HA0N@91061,COG0531@1,COG0531@2	NA|NA|NA	E	Amino Acid
PAKBJLMI_01060	272621.LBA1425	2.4e-127	461.5	Lactobacillaceae													Bacteria	1VSYU@1239,3F4J2@33958,4HU15@91061,COG4814@1,COG4814@2	NA|NA|NA	S	Alpha beta hydrolase
PAKBJLMI_01062	272621.LBA1426	2.4e-128	464.9	Lactobacillaceae													Bacteria	1U575@1239,29NM6@1,309J4@2,3F507@33958,4IEYP@91061	NA|NA|NA		
PAKBJLMI_01063	272621.LBA1427	9e-127	459.5	Lactobacillaceae	dkgA	GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0030312,GO:0040007,GO:0044464,GO:0071944	1.1.1.346	ko:K06221			R08878	RC00089	ko00000,ko01000				Bacteria	1U59X@1239,3F5BI@33958,4IF1F@91061,COG0656@1,COG0656@2	NA|NA|NA	S	L-ascorbic acid biosynthetic process
PAKBJLMI_01064	272621.LBA1428	9.2e-71	272.7	Lactobacillaceae													Bacteria	1VN90@1239,3F6MQ@33958,4HRIC@91061,COG1765@1,COG1765@2	NA|NA|NA	O	OsmC-like protein
PAKBJLMI_01065	272621.LBA1429	1.8e-212	745.0	Lactobacillaceae													Bacteria	1TQHD@1239,3F43Q@33958,4HX8J@91061,COG0477@1,COG2814@2	NA|NA|NA	EGP	Major facilitator Superfamily
PAKBJLMI_01066	272621.LBA1430	3.5e-233	813.9	Lactobacillaceae	sptS		2.7.13.3	ko:K11328	ko02020,map02020	M00464			ko00000,ko00001,ko00002,ko01000,ko01001,ko02022				Bacteria	1UHQH@1239,3F4JY@33958,4HAHG@91061,COG0642@1,COG0642@2	NA|NA|NA	T	Histidine kinase
PAKBJLMI_01067	272621.LBA1431	1.5e-118	432.2	Lactobacillaceae													Bacteria	1TPU2@1239,3F53G@33958,4HG2E@91061,COG0745@1,COG0745@2	NA|NA|NA	K	response regulator
PAKBJLMI_01068	272621.LBA1432	1.7e-113	415.2	Lactobacillaceae			2.7.6.5	ko:K00951,ko:K07816	ko00230,map00230		R00429	RC00002,RC00078	ko00000,ko00001,ko01000				Bacteria	1TQ2F@1239,3F518@33958,4IQWD@91061,COG2357@1,COG2357@2	NA|NA|NA	T	Region found in RelA / SpoT proteins
PAKBJLMI_01069	272621.LBA1433	2.3e-187	661.4	Lactobacillaceae	dhaK	GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016052,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019637,GO:0019751,GO:0033554,GO:0034308,GO:0042180,GO:0042182,GO:0042802,GO:0044237,GO:0044238,GO:0044248,GO:0044262,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046365,GO:0047324,GO:0050896,GO:0051716,GO:0061610,GO:0071704,GO:1901135,GO:1901575,GO:1901615	2.7.1.121,2.7.1.28,2.7.1.29,4.6.1.15	ko:K00863,ko:K05878,ko:K05879	ko00051,ko00561,ko00680,ko01100,ko01120,ko01200,ko04622,map00051,map00561,map00680,map01100,map01120,map01200,map04622	M00344	R01011,R01012,R01059	RC00002,RC00015,RC00017	ko00000,ko00001,ko00002,ko01000			iEcHS_1320.EcHS_A1304,iUMNK88_1353.UMNK88_1515,iYL1228.KPN_03495	Bacteria	1TP92@1239,3F4F2@33958,4H9VS@91061,COG2376@1,COG2376@2	NA|NA|NA	G	Dak1 domain
PAKBJLMI_01070	272621.LBA1434	1.2e-103	382.5	Lactobacillaceae	dhaL	GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0006793,GO:0006796,GO:0008144,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017076,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0046872,GO:0047324,GO:0097159,GO:0097367,GO:1901265,GO:1901363	2.7.1.121	ko:K05879	ko00561,ko01100,map00561,map01100		R01012	RC00015,RC00017	ko00000,ko00001,ko01000				Bacteria	1V4FH@1239,3F5VS@33958,4HGZY@91061,COG1461@1,COG1461@2	NA|NA|NA	S	Dak2
PAKBJLMI_01071	272621.LBA1435	2.1e-61	241.5	Lactobacillaceae	dhaM	GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237,GO:0047324	2.7.1.121	ko:K05881	ko00561,map00561		R01012	RC00015,RC00017	ko00000,ko00001,ko01000,ko02000				Bacteria	1VF32@1239,3F6YE@33958,4HKCN@91061,COG3412@1,COG3412@2	NA|NA|NA	S	PTS system fructose IIA component
PAKBJLMI_01072	272621.LBA1436	5.6e-132	476.9	Lactobacillaceae	glpF			ko:K02440					ko00000,ko02000	1.A.8.1,1.A.8.2			Bacteria	1TP4T@1239,3F4J6@33958,4HAWP@91061,COG0580@1,COG0580@2	NA|NA|NA	U	Belongs to the MIP aquaporin (TC 1.A.8) family
PAKBJLMI_01073	272621.LBA1437	1.6e-282	978.0	Lactobacillaceae	gtfA	GO:0003674,GO:0003824,GO:0004645,GO:0009018,GO:0016740,GO:0016757,GO:0016758	2.4.1.7	ko:K00690	ko00500,map00500		R00803	RC00028	ko00000,ko00001,ko01000		GH13		Bacteria	1TR93@1239,3F3YR@33958,4HEKC@91061,COG0366@1,COG0366@2	NA|NA|NA	G	Sucrose glucosyltransferase
PAKBJLMI_01074	272621.LBA1438	0.0	1517.3	Lactobacillaceae	rafA	GO:0003674,GO:0003824,GO:0004553,GO:0004557,GO:0005975,GO:0008150,GO:0008152,GO:0009056,GO:0009743,GO:0009987,GO:0010033,GO:0015925,GO:0016043,GO:0016052,GO:0016787,GO:0016798,GO:0022607,GO:0042221,GO:0043933,GO:0044085,GO:0044238,GO:0050896,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0065003,GO:0071704,GO:0071840,GO:1901545,GO:1901575,GO:1901700	3.2.1.22	ko:K07407	ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603		R01101,R01103,R01104,R01194,R01329,R02926,R03634,R04019,R04470,R05549,R05961,R06091	RC00049,RC00059,RC00451	ko00000,ko00001,ko01000				Bacteria	1TQF4@1239,3F3RU@33958,4HA5R@91061,COG3345@1,COG3345@2	NA|NA|NA	G	alpha-galactosidase
PAKBJLMI_01075	272621.LBA1439	2.3e-209	734.6	Lactobacillaceae	msmX			ko:K10112	ko02010,map02010	M00194,M00196,M00197,M00200,M00201,M00206,M00207,M00491,M00602,M00605,M00606			ko00000,ko00001,ko00002,ko02000	3.A.1.1			Bacteria	1TP2M@1239,3FC3D@33958,4HAMQ@91061,COG3842@1,COG3842@2	NA|NA|NA	P	Belongs to the ABC transporter superfamily
PAKBJLMI_01076	272621.LBA1440	5.7e-152	543.5	Lactobacillaceae	msmG			ko:K10119	ko02010,map02010	M00196			ko00000,ko00001,ko00002,ko02000	3.A.1.1.28			Bacteria	1V0AP@1239,3FC8H@33958,4HDZE@91061,COG0395@1,COG0395@2	NA|NA|NA	P	Binding-protein-dependent transport system inner membrane component
PAKBJLMI_01077	272621.LBA1441	1.8e-156	558.5	Lactobacillaceae	msmF			ko:K02025,ko:K10118,ko:K10121,ko:K15771	ko02010,map02010	M00196,M00197,M00207,M00491			ko00000,ko00001,ko00002,ko02000	3.A.1.1,3.A.1.1.16,3.A.1.1.2,3.A.1.1.20,3.A.1.1.28			Bacteria	1TQB1@1239,3FCAS@33958,4HDV6@91061,COG1175@1,COG1175@2	NA|NA|NA	P	Binding-protein-dependent transport system inner membrane component
PAKBJLMI_01078	272621.LBA1442	4e-242	843.6	Lactobacillaceae	msmE			ko:K10117	ko02010,map02010	M00196			ko00000,ko00001,ko00002,ko02000	3.A.1.1.28			Bacteria	1TQJE@1239,3F57V@33958,4HEMB@91061,COG1653@1,COG1653@2	NA|NA|NA	G	Bacterial extracellular solute-binding protein
PAKBJLMI_01079	272621.LBA1443	2.4e-158	564.7	Lactobacillaceae	msmR												Bacteria	1VACH@1239,3FC2P@33958,4HK2E@91061,COG2207@1,COG2207@2	NA|NA|NA	K	helix_turn_helix, arabinose operon control protein
PAKBJLMI_01080	272621.LBA1444	5e-75	287.0	Lactobacillaceae	merR			ko:K21089,ko:K21972,ko:K22491	ko02026,map02026				ko00000,ko00001,ko03000				Bacteria	1VDPP@1239,3F6MS@33958,4HPJY@91061,COG0789@1,COG0789@2	NA|NA|NA	K	MerR HTH family regulatory protein
PAKBJLMI_01081	272621.LBA1446	1.6e-266	924.9	Lactobacillaceae	lmrB												Bacteria	1TPRN@1239,3F4A2@33958,4H9VV@91061,COG0477@1,COG2814@2	NA|NA|NA	EGP	Major facilitator Superfamily
PAKBJLMI_01082	272621.LBA1447	1.1e-96	359.4	Lactobacillaceae													Bacteria	1VDDQ@1239,2C9UQ@1,32RPZ@2,3F5X9@33958,4HNJB@91061	NA|NA|NA	S	Domain of unknown function (DUF4811)
PAKBJLMI_01083	272621.LBA1449	5.3e-52	209.9	Lactobacillaceae													Bacteria	1VC64@1239,29PJD@1,30AHI@2,3F88R@33958,4IGG8@91061	NA|NA|NA	S	Domain of unknown function (DUF4160)
PAKBJLMI_01084	272621.LBA1450	1.2e-45	188.7	Lactobacillaceae													Bacteria	1V9FC@1239,2B2ZF@1,31VKJ@2,3F82P@33958,4IVD4@91061	NA|NA|NA		
PAKBJLMI_01086	272621.LBA1454	1.1e-39	168.7	Lactobacillaceae													Bacteria	1VA4J@1239,3F8WG@33958,4IT3H@91061,COG4925@1,COG4925@2	NA|NA|NA	C	FMN binding
PAKBJLMI_01087	272621.LBA1455	1.8e-167	595.1	Lactobacillaceae													Bacteria	1U7FT@1239,29Q45@1,30B2V@2,3F9JX@33958,4IHBV@91061	NA|NA|NA	S	SLAP domain
PAKBJLMI_01088	272621.LBA1457	1.2e-193	682.2	Lactobacillaceae	galM		5.1.3.3	ko:K01785	ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130	M00632	R01602,R10619	RC00563	ko00000,ko00001,ko00002,ko01000				Bacteria	1TQGJ@1239,3F48R@33958,4HADZ@91061,COG2017@1,COG2017@2	NA|NA|NA	G	Catalyzes the interconversion of alpha and beta anomers of maltose
PAKBJLMI_01089	272621.LBA1458	4.3e-288	996.5	Lactobacillaceae	galT		2.7.7.12	ko:K00965	ko00052,ko00520,ko01100,ko04917,map00052,map00520,map01100,map04917	M00362,M00554,M00632	R00955	RC00002	ko00000,ko00001,ko00002,ko01000				Bacteria	1TPBN@1239,3F4D8@33958,4HAYJ@91061,COG4468@1,COG4468@2	NA|NA|NA	G	UDP-glucose--hexose-1-phosphate uridylyltransferase
PAKBJLMI_01090	272621.LBA1459	1.3e-221	775.4	Lactobacillaceae	galK	GO:0005975,GO:0005996,GO:0006012,GO:0008150,GO:0008152,GO:0019318,GO:0044238,GO:0044281,GO:0071704	2.7.1.6	ko:K00849	ko00052,ko00520,ko01100,map00052,map00520,map01100	M00554,M00632	R01092	RC00002,RC00078	ko00000,ko00001,ko00002,ko01000,ko04147				Bacteria	1TPD0@1239,3F3Q9@33958,4HARP@91061,COG0153@1,COG0153@2	NA|NA|NA	F	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
PAKBJLMI_01091	272621.LBA1460	2.3e-187	661.4	Bacilli				ko:K20276	ko02024,map02024				ko00000,ko00001				Bacteria	1VNG5@1239,4HRQD@91061,COG4932@1,COG4932@2	NA|NA|NA	M	domain protein
PAKBJLMI_01092	272621.LBA1461	8.8e-113	412.9	Lactobacillaceae													Bacteria	1U6AV@1239,2DKPH@1,30A7P@2,3F7H2@33958,4IG2A@91061	NA|NA|NA		
PAKBJLMI_01093	272621.LBA1462	0.0	1398.6	Lactobacillaceae	lacZ		3.2.1.23	ko:K12308	ko00052,map00052		R01105	RC00452	ko00000,ko00001,ko01000				Bacteria	1TQN6@1239,3F3PC@33958,4HARI@91061,COG1874@1,COG1874@2	NA|NA|NA	G	-beta-galactosidase
PAKBJLMI_01094	272621.LBA1463	0.0	1236.1	Lactobacillaceae	lacS			ko:K03292,ko:K11104,ko:K16209					ko00000,ko02000	2.A.2,2.A.2.1,2.A.2.2			Bacteria	1TRA5@1239,3F3P7@33958,4HCDS@91061,COG2190@1,COG2190@2,COG2211@1,COG2211@2	NA|NA|NA	G	Transporter
PAKBJLMI_01095	272621.LBA1464	2.1e-224	784.6	Lactobacillaceae				ko:K07496					ko00000				Bacteria	1TRNY@1239,3F431@33958,4HBKP@91061,COG0675@1,COG0675@2	NA|NA|NA	L	Putative transposase DNA-binding domain
PAKBJLMI_01096	272621.LBA1465	1.2e-188	665.6	Lactobacillaceae	lacR			ko:K02529					ko00000,ko03000				Bacteria	1TPZJ@1239,3F3PB@33958,4HC9Z@91061,COG1609@1,COG1609@2	NA|NA|NA	K	Transcriptional regulator
PAKBJLMI_01097	272621.LBA1467	0.0	1327.4	Lactobacillaceae	lacL		3.2.1.23	ko:K01190	ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100		R01105,R01678,R03355,R04783,R06114	RC00049,RC00452	ko00000,ko00001,ko01000				Bacteria	1TPDC@1239,3F4EI@33958,4HANW@91061,COG3250@1,COG3250@2	NA|NA|NA	G	Belongs to the glycosyl hydrolase 2 family
PAKBJLMI_01098	272621.LBA1468	4.3e-188	663.7	Lactobacillaceae	lacM		3.2.1.23,3.2.1.35,3.2.1.51,3.2.1.97	ko:K01190,ko:K01197,ko:K01206,ko:K17624	ko00052,ko00511,ko00531,ko00600,ko01100,map00052,map00511,map00531,map00600,map01100	M00076,M00077	R01105,R01678,R03355,R04783,R06114,R07824,R07825,R10905	RC00049,RC00452	ko00000,ko00001,ko00002,ko00536,ko00537,ko01000,ko02042,ko04147		GH101,GH29		Bacteria	1TRVA@1239,3F51Z@33958,4HFMH@91061,COG3250@1,COG3250@2	NA|NA|NA	G	beta-galactosidase
PAKBJLMI_01099	272621.LBA1469	2e-191	674.9	Lactobacillaceae	galE		5.1.3.2	ko:K01784	ko00052,ko00520,ko01100,map00052,map00520,map01100	M00361,M00362,M00632	R00291,R02984	RC00289	ko00000,ko00001,ko00002,ko01000				Bacteria	1TQ7N@1239,3F3YF@33958,4H9U5@91061,COG1087@1,COG1087@2	NA|NA|NA	M	Belongs to the NAD(P)-dependent epimerase dehydratase family
PAKBJLMI_01100	272621.LBA1470	4.7e-309	1066.2	Lactobacillaceae			2.7.7.7	ko:K02343	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400				Bacteria	1TR27@1239,3F3QJ@33958,4HDT1@91061,COG5512@1,COG5512@2	NA|NA|NA	S	Domain of unknown function (DUF5060)
PAKBJLMI_01101	272621.LBA1471	1.3e-216	758.8	Lactobacillaceae	uhpT												Bacteria	1TQZ7@1239,3F54C@33958,4HERG@91061,COG0477@1,COG2814@2	NA|NA|NA	EGP	Major facilitator Superfamily
PAKBJLMI_01102	272621.LBA1472	2.1e-174	618.2	Lactobacillaceae	rbsR			ko:K02529,ko:K03484					ko00000,ko03000				Bacteria	1TQ7K@1239,3F5DR@33958,4H9V1@91061,COG1609@1,COG1609@2	NA|NA|NA	K	helix_turn _helix lactose operon repressor
PAKBJLMI_01103	272621.LBA1473	0.0	1891.7	Lactobacillaceae			3.2.1.40	ko:K05989					ko00000,ko01000				Bacteria	1TPY5@1239,3F3ZB@33958,4HDFB@91061,COG3408@1,COG3408@2	NA|NA|NA	G	Alpha-L-rhamnosidase N-terminal domain
PAKBJLMI_01104	272621.LBA1474	2.6e-58	231.1	Bacteria													Bacteria	COG3394@1,COG3394@2	NA|NA|NA	G	polysaccharide catabolic process
PAKBJLMI_01105	272621.LBA0614	1.2e-263	915.2	Lactobacillaceae				ko:K07497					ko00000				Bacteria	1TQQY@1239,3FCFA@33958,4HC8M@91061,COG2801@1,COG2801@2	NA|NA|NA	L	COG2963 Transposase and inactivated derivatives
PAKBJLMI_01106	272621.LBA1476	1e-78	299.3	Lactobacillaceae													Bacteria	1V4IM@1239,3F5B7@33958,4HG4E@91061,COG3394@1,COG3394@2	NA|NA|NA	G	YdjC-like protein
PAKBJLMI_01107	272621.LBA1477	7.3e-177	626.3	Lactobacillaceae													Bacteria	1TP1H@1239,3F43I@33958,4HFZ9@91061,COG0657@1,COG0657@2	NA|NA|NA	I	alpha/beta hydrolase fold
PAKBJLMI_01108	272621.LBA1478	0.0	1422.1	Lactobacillaceae			2.7.1.208,2.7.1.211	ko:K02749,ko:K02750,ko:K02755,ko:K02756,ko:K02757,ko:K02808,ko:K02809,ko:K02810	ko00500,ko02060,map00500,map02060	M00268,M00269,M00271	R00811,R04111	RC00017,RC03206	ko00000,ko00001,ko00002,ko01000,ko02000	4.A.1.1.10,4.A.1.1.16,4.A.1.1.4,4.A.1.1.8,4.A.1.2.1,4.A.1.2.10,4.A.1.2.11,4.A.1.2.12,4.A.1.2.2,4.A.1.2.5,4.A.1.2.6,4.A.1.2.9			Bacteria	1TP5X@1239,3F458@33958,4HA0I@91061,COG1263@1,COG1263@2,COG1264@1,COG1264@2,COG2190@1,COG2190@2	NA|NA|NA	G	phosphotransferase system
PAKBJLMI_01109	272621.LBA1479	5.7e-155	553.5	Lactobacillaceae	licT			ko:K02538,ko:K03488					ko00000,ko03000				Bacteria	1TQJJ@1239,3FB5Q@33958,4HBB3@91061,COG3711@1,COG3711@2	NA|NA|NA	K	CAT RNA binding domain
PAKBJLMI_01110	272621.LBA1480	2.4e-258	897.5	Lactobacillaceae													Bacteria	1TQS6@1239,3F4ZP@33958,4HCMB@91061,COG2730@1,COG2730@2	NA|NA|NA	G	Protein of unknown function (DUF4038)
PAKBJLMI_01111	272621.LBA1481	5.7e-175	620.2	Lactobacillaceae	rbsB	GO:0003674,GO:0005215,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006935,GO:0008150,GO:0008643,GO:0009605,GO:0015144,GO:0015145,GO:0015749,GO:0015750,GO:0015752,GO:0016020,GO:0016021,GO:0022857,GO:0030246,GO:0030288,GO:0030313,GO:0031224,GO:0031975,GO:0034219,GO:0036094,GO:0040011,GO:0042221,GO:0042330,GO:0042597,GO:0044425,GO:0044464,GO:0048029,GO:0050896,GO:0050918,GO:0051119,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944		ko:K10439	ko02010,ko02030,map02010,map02030	M00212			ko00000,ko00001,ko00002,ko02000	3.A.1.2.1,3.A.1.2.13,3.A.1.2.19			Bacteria	1TQ1B@1239,3F4SC@33958,4HCV8@91061,COG1879@1,COG1879@2	NA|NA|NA	G	Periplasmic binding protein domain
PAKBJLMI_01112	272621.LBA1482	2e-147	528.5	Lactobacillaceae	rbsC	GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0008643,GO:0015144,GO:0015145,GO:0015146,GO:0015591,GO:0015749,GO:0015750,GO:0015752,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0032991,GO:0034219,GO:0043190,GO:0044425,GO:0044459,GO:0044464,GO:0051119,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:0098533,GO:0098796,GO:0098797,GO:1902494,GO:1902495,GO:1904949,GO:1990351		ko:K03549,ko:K10440	ko02010,map02010	M00212			ko00000,ko00001,ko00002,ko02000	2.A.72,3.A.1.2.1,3.A.1.2.13,3.A.1.2.19		iAF1260.b3750,iAPECO1_1312.APECO1_2713,iB21_1397.B21_03581,iBWG_1329.BWG_3441,iE2348C_1286.E2348C_4060,iEC042_1314.EC042_4137,iEC55989_1330.EC55989_4225,iECABU_c1320.ECABU_c42350,iECBD_1354.ECBD_4280,iECB_1328.ECB_03636,iECDH10B_1368.ECDH10B_3938,iECDH1ME8569_1439.ECDH1ME8569_3638,iECED1_1282.ECED1_4440,iECH74115_1262.ECH74115_5186,iECIAI1_1343.ECIAI1_3934,iECNA114_1301.ECNA114_3899,iECO103_1326.ECO103_4407,iECO111_1330.ECO111_4584,iECO26_1355.ECO26_4828,iECOK1_1307.ECOK1_4199,iECS88_1305.ECS88_4172,iECSE_1348.ECSE_4040,iECSF_1327.ECSF_3598,iECSP_1301.ECSP_4800,iECUMN_1333.ECUMN_4280,iECs_1301.ECs4692,iEcDH1_1363.EcDH1_4217,iEcE24377_1341.EcE24377A_4266,iEcHS_1320.EcHS_A3966,iEcSMS35_1347.EcSMS35_4118,iEcolC_1368.EcolC_4244,iJO1366.b3750,iJR904.b3750,iLF82_1304.LF82_1817,iNRG857_1313.NRG857_18675,iUMN146_1321.UM146_18940,iUMNK88_1353.UMNK88_4562,iUTI89_1310.UTI89_C4305,iY75_1357.Y75_RS18320,ic_1306.c4678	Bacteria	1TP72@1239,3F5NF@33958,4H9Y3@91061,COG1172@1,COG1172@2	NA|NA|NA	U	Belongs to the binding-protein-dependent transport system permease family
PAKBJLMI_01114	272621.LBA1483	5.8e-258	896.3	Lactobacillaceae	rbsA	GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008144,GO:0008150,GO:0008643,GO:0015144,GO:0015145,GO:0015146,GO:0015399,GO:0015405,GO:0015407,GO:0015591,GO:0015608,GO:0015611,GO:0015749,GO:0015750,GO:0015752,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0030554,GO:0031224,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0034219,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0043167,GO:0043168,GO:0043190,GO:0043211,GO:0043492,GO:0044425,GO:0044459,GO:0044464,GO:0051119,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:0097159,GO:0097367,GO:0098533,GO:0098796,GO:0098797,GO:1901265,GO:1901363,GO:1902494,GO:1902495,GO:1904949,GO:1990351	3.6.3.17	ko:K10441,ko:K10542	ko02010,map02010	M00212,M00214			ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.2.1,3.A.1.2.13,3.A.1.2.19,3.A.1.2.3		iEC55989_1330.EC55989_4224,iECSE_1348.ECSE_4039,iECW_1372.ECW_m4052,iEcE24377_1341.EcE24377A_4265,iWFL_1372.ECW_m4052,iYL1228.KPN_04154	Bacteria	1TP6I@1239,3FBUB@33958,4H9VK@91061,COG1129@1,COG1129@2	NA|NA|NA	G	ABC transporter
PAKBJLMI_01115	272621.LBA1484	3.9e-66	257.3	Lactobacillaceae	rbsD	GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006014,GO:0006810,GO:0008150,GO:0008152,GO:0008643,GO:0009056,GO:0015144,GO:0015145,GO:0015146,GO:0015399,GO:0015405,GO:0015407,GO:0015591,GO:0015608,GO:0015611,GO:0015749,GO:0015750,GO:0015752,GO:0016052,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016866,GO:0016887,GO:0017111,GO:0019303,GO:0019321,GO:0019323,GO:0022804,GO:0022857,GO:0034219,GO:0042623,GO:0042626,GO:0042802,GO:0043211,GO:0043492,GO:0044238,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046365,GO:0051119,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071704,GO:1901575	5.4.99.62	ko:K06726	ko02010,map02010		R08247	RC02247	ko00000,ko00001,ko01000			iAF1260.b3748,iBWG_1329.BWG_3439,iECDH10B_1368.ECDH10B_3936,iECDH1ME8569_1439.ECDH1ME8569_3636,iECH74115_1262.ECH74115_5184,iECSP_1301.ECSP_4798,iECs_1301.ECs4690,iETEC_1333.ETEC_4039,iEcDH1_1363.EcDH1_4219,iJO1366.b3748,iJR904.b3748,iY75_1357.Y75_RS18330	Bacteria	1VA2V@1239,3F6GA@33958,4HIFW@91061,COG1869@1,COG1869@2	NA|NA|NA	G	Catalyzes the interconversion of beta-pyran and beta- furan forms of D-ribose
PAKBJLMI_01116	272621.LBA1485	8e-163	579.7	Lactobacillaceae	rbsK		2.7.1.15	ko:K00852	ko00030,map00030		R01051,R02750	RC00002,RC00017	ko00000,ko00001,ko01000				Bacteria	1TQRC@1239,3F3S5@33958,4HA87@91061,COG0524@1,COG0524@2	NA|NA|NA	H	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PAKBJLMI_01117	272621.LBA1486	1.7e-289	1001.1	Lactobacillaceae													Bacteria	1TQDX@1239,3F5I1@33958,4HCRT@91061,COG2407@1,COG2407@2	NA|NA|NA	G	isomerase
PAKBJLMI_01118	272621.LBA1487	5.1e-223	780.0	Lactobacillaceae				ko:K07496					ko00000				Bacteria	1TRNY@1239,3F431@33958,4HBKP@91061,COG0675@1,COG0675@2	NA|NA|NA	L	Putative transposase DNA-binding domain
PAKBJLMI_01119	272621.LBA1488	6e-188	663.3	Lactobacillaceae	purR13			ko:K02529					ko00000,ko03000				Bacteria	1UXXV@1239,3F4QC@33958,4HF84@91061,COG1609@1,COG1609@2	NA|NA|NA	K	Bacterial regulatory proteins, lacI family
PAKBJLMI_01120	272621.LBA1489	1.2e-154	552.4	Lactobacillaceae			2.2.1.1	ko:K00615	ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230	M00004,M00007,M00165,M00167	R01067,R01641,R01830,R06590	RC00032,RC00226,RC00571,RC01560	ko00000,ko00001,ko00002,ko01000				Bacteria	1TT51@1239,3FBU5@33958,4HGF4@91061,COG3959@1,COG3959@2	NA|NA|NA	G	Transketolase, thiamine diphosphate binding domain
PAKBJLMI_01121	272621.LBA1490	1.3e-176	625.5	Lactobacillaceae	tktA		2.2.1.1	ko:K00615	ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230	M00004,M00007,M00165,M00167	R01067,R01641,R01830,R06590	RC00032,RC00226,RC00571,RC01560	ko00000,ko00001,ko00002,ko01000				Bacteria	1V0K5@1239,3FB3Z@33958,4HEFS@91061,COG3958@1,COG3958@2	NA|NA|NA	G	Transketolase, pyrimidine binding domain
PAKBJLMI_01123	272621.LBA1492	3.6e-172	610.9	Lactobacillaceae	glpK_1	GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615	2.7.1.30	ko:K00864	ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626		R00847	RC00002,RC00017	ko00000,ko00001,ko01000,ko04147				Bacteria	1TRX3@1239,3F4TE@33958,4HEQA@91061,COG0554@1,COG0554@2	NA|NA|NA	G	FGGY family of carbohydrate kinases, C-terminal domain
PAKBJLMI_01124	272621.LBA1493	8.1e-224	782.7	Lactobacillaceae	ackA	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464	2.7.2.1	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	M00357,M00579	R00315,R01353	RC00002,RC00043	ko00000,ko00001,ko00002,ko01000			iNJ661.Rv0409	Bacteria	1TQ22@1239,3F48Z@33958,4HA7K@91061,COG0282@1,COG0282@2	NA|NA|NA	F	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PAKBJLMI_01125	272621.LBA1494	1.9e-248	864.8	Lactobacillaceae	lmrB			ko:K18926		M00715			ko00000,ko00002,ko02000	2.A.1.3.30			Bacteria	1TPRN@1239,3F4A2@33958,4H9VV@91061,COG0477@1,COG2814@2	NA|NA|NA	EGP	Major facilitator Superfamily
PAKBJLMI_01128	272621.LBA1497	4.1e-152	544.3	Lactobacillaceae													Bacteria	1U5E7@1239,2ACE2@1,309NT@2,3F5PN@33958,4IF5H@91061	NA|NA|NA		
PAKBJLMI_01129	272621.LBA1498	4e-167	594.0	Lactobacillaceae													Bacteria	1U54Z@1239,2ACE2@1,309I3@2,3F4PW@33958,4IEW5@91061	NA|NA|NA		
PAKBJLMI_01130	272621.LBA1499	1.8e-116	425.2	Lactobacillaceae	ybbL	GO:0005575,GO:0005623,GO:0005886,GO:0006873,GO:0006875,GO:0006879,GO:0008150,GO:0009987,GO:0016020,GO:0019725,GO:0030003,GO:0042592,GO:0044464,GO:0046916,GO:0048878,GO:0050801,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0065007,GO:0065008,GO:0071944,GO:0098771		ko:K02065,ko:K02068	ko02010,map02010	M00210,M00211,M00669,M00670			ko00000,ko00001,ko00002,ko02000	3.A.1.27			Bacteria	1V3DQ@1239,3F4UY@33958,4HHGU@91061,COG4619@1,COG4619@2	NA|NA|NA	S	ABC transporter, ATP-binding protein
PAKBJLMI_01131	272621.LBA1500	5.5e-133	480.3	Lactobacillaceae	ybbM	GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006873,GO:0006875,GO:0006879,GO:0008150,GO:0009987,GO:0015075,GO:0016020,GO:0016021,GO:0019725,GO:0022857,GO:0030003,GO:0031224,GO:0031226,GO:0034220,GO:0042592,GO:0044425,GO:0044459,GO:0044464,GO:0046916,GO:0048878,GO:0050801,GO:0051179,GO:0051234,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071944,GO:0098771		ko:K02069		M00211			ko00000,ko00002,ko02000	9.B.25.1			Bacteria	1UY1N@1239,3F4P1@33958,4HDM4@91061,COG0390@1,COG0390@2	NA|NA|NA	S	Uncharacterised protein family (UPF0014)
PAKBJLMI_01132	272621.LBA1501	8.9e-264	915.6	Lactobacillaceae	glnA		6.3.1.2	ko:K01915	ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727		R00253	RC00010,RC02798	ko00000,ko00001,ko01000,ko04147				Bacteria	1TNZA@1239,3F41A@33958,4HACE@91061,COG0174@1,COG0174@2	NA|NA|NA	E	glutamine synthetase
PAKBJLMI_01133	272621.LBA1502	2.3e-237	827.8	Lactobacillaceae	ynbB	GO:0003674,GO:0003824,GO:0003962,GO:0004123,GO:0016740,GO:0016765,GO:0016829,GO:0016846	4.4.1.1	ko:K01758	ko00260,ko00270,ko00450,ko01100,ko01130,ko01230,map00260,map00270,map00450,map01100,map01130,map01230	M00338	R00782,R01001,R02408,R04770,R04930,R09366	RC00056,RC00069,RC00348,RC00382,RC00710,RC01209,RC01210,RC01245,RC02303	ko00000,ko00001,ko00002,ko01000,ko04147				Bacteria	1TQ88@1239,3F3PU@33958,4HAF5@91061,COG4100@1,COG4100@2	NA|NA|NA	P	aluminum resistance
PAKBJLMI_01134	272621.LBA1503	2.1e-171	608.2	Lactobacillaceae	miaA	GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360	2.5.1.75	ko:K00791	ko00908,ko01100,ko01110,map00908,map01100,map01110		R01122	RC02820	ko00000,ko00001,ko01000,ko01006,ko03016				Bacteria	1TPSC@1239,3F3XS@33958,4HAVW@91061,COG0324@1,COG0324@2	NA|NA|NA	F	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
PAKBJLMI_01135	272621.LBA1504	3.3e-65	254.2	Lactobacillaceae	yqhL												Bacteria	1VAI7@1239,3F67E@33958,4HKCE@91061,COG0607@1,COG0607@2	NA|NA|NA	P	Rhodanese-like protein
PAKBJLMI_01136	272621.LBA1505	1.6e-32	144.8	Lactobacillaceae	yqgQ												Bacteria	1VK83@1239,3F83I@33958,4HRG2@91061,COG4483@1,COG4483@2	NA|NA|NA	S	Bacterial protein of unknown function (DUF910)
PAKBJLMI_01137	272621.LBA1506	1.2e-118	432.6	Lactobacillaceae	gluP		3.4.21.105	ko:K19225					ko00000,ko01000,ko01002				Bacteria	1TQXT@1239,3FC8V@33958,4HCDF@91061,COG0705@1,COG0705@2	NA|NA|NA	S	Rhomboid family
PAKBJLMI_01138	272621.LBA1507	1.1e-98	365.9	Lactobacillaceae	ygfA	GO:0003674,GO:0003824,GO:0006082,GO:0006575,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009396,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016882,GO:0018130,GO:0019438,GO:0019752,GO:0022611,GO:0030272,GO:0032502,GO:0034641,GO:0035999,GO:0042398,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0046653,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	6.3.3.2	ko:K01934	ko00670,ko01100,map00670,map01100		R02301	RC00183	ko00000,ko00001,ko01000			iECABU_c1320.ECABU_c31940,iECOK1_1307.ECOK1_3298,iECSF_1327.ECSF_2705,iUTI89_1310.UTI89_C3298	Bacteria	1VA91@1239,3FC8W@33958,4HKQI@91061,COG0212@1,COG0212@2	NA|NA|NA	H	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
PAKBJLMI_01139	1423748.BALB01000003_gene424	1.2e-20	104.8	Lactobacillaceae	rpmG			ko:K02913	ko03010,map03010	M00178			br01610,ko00000,ko00001,ko00002,ko03011				Bacteria	1VEJ4@1239,3F828@33958,4HNIM@91061,COG0267@1,COG0267@2	NA|NA|NA	J	Belongs to the bacterial ribosomal protein bL33 family
PAKBJLMI_01140	272621.LBA1509	0.0	1372.1	Lactobacillaceae	pbp2b		3.4.16.4	ko:K00687,ko:K05515,ko:K12553,ko:K21465	ko00550,ko01100,ko01501,map00550,map01100,map01501				ko00000,ko00001,ko01000,ko01011				Bacteria	1TQHY@1239,3F3KH@33958,4HAFX@91061,COG0768@1,COG0768@2	NA|NA|NA	M	Penicillin-binding Protein
PAKBJLMI_01141	272621.LBA1510	0.0	1642.5	Lactobacillaceae													Bacteria	1TRR1@1239,3F49G@33958,4HBW6@91061,COG4485@1,COG4485@2	NA|NA|NA	S	membrane
PAKBJLMI_01142	272621.LBA1511	2.3e-170	604.7	Lactobacillaceae			2.7.1.59	ko:K00884	ko00520,ko01100,map00520,map01100		R01201	RC00002,RC00017	ko00000,ko00001,ko01000				Bacteria	1V38W@1239,3F5MG@33958,4HGPI@91061,COG2971@1,COG2971@2	NA|NA|NA	G	BadF/BadG/BcrA/BcrD ATPase family
PAKBJLMI_01143	272621.LBA1512	0.0	3045.8	Lactobacillaceae													Bacteria	1TPH1@1239,3F3M5@33958,4HBQH@91061,COG1404@1,COG1404@2	NA|NA|NA	O	Belongs to the peptidase S8 family
PAKBJLMI_01144	272621.LBA1513	1.7e-35	155.2	Lactobacillaceae	ltrA												Bacteria	1VAA8@1239,3F523@33958,4HMPC@91061,COG4292@1,COG4292@2	NA|NA|NA	S	Bacterial low temperature requirement A protein (LtrA)
PAKBJLMI_01145	748671.LCRIS_00939	1.1e-12	78.2	Lactobacillaceae	ltrA												Bacteria	1VAA8@1239,3F523@33958,4HMPC@91061,COG4292@1,COG4292@2	NA|NA|NA	S	Bacterial low temperature requirement A protein (LtrA)
PAKBJLMI_01146	272621.LBA1515	3.6e-254	883.6	Lactobacillaceae	pepT2		3.4.11.14,3.4.11.4	ko:K01258,ko:K01263					ko00000,ko01000,ko01002				Bacteria	1TP3A@1239,3FB44@33958,4HA04@91061,COG2195@1,COG2195@2	NA|NA|NA	E	Cleaves the N-terminal amino acid of tripeptides
PAKBJLMI_01147	272621.LBA1516	6.7e-170	603.2	Lactobacillaceae	ldh		1.1.1.27	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922		R00703,R01000,R03104	RC00031,RC00044	ko00000,ko00001,ko01000,ko04147				Bacteria	1TQIV@1239,3FBIV@33958,4IQTH@91061,COG0039@1,COG0039@2	NA|NA|NA	C	lactate/malate dehydrogenase, alpha/beta C-terminal domain
PAKBJLMI_01148	272621.LBA1517	4.9e-63	247.3	Lactobacillaceae	greA	GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0018130,GO:0019438,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:1901360,GO:1901362,GO:1901576		ko:K03624					ko00000,ko03021				Bacteria	1V44S@1239,3F4ZF@33958,4HGZU@91061,COG0782@1,COG0782@2	NA|NA|NA	K	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PAKBJLMI_01149	272621.LBA1518	0.0	1597.4	Lactobacillaceae	pheT	GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0030312,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0040007,GO:0042802,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494	6.1.1.20	ko:K01890	ko00970,map00970	M00359,M00360	R03660	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016			iG2583_1286.G2583_2160,iPC815.YPO2428	Bacteria	1TP98@1239,3F3V3@33958,4HAQ9@91061,COG0072@1,COG0072@2	NA|NA|NA	J	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PAKBJLMI_01150	272621.LBA1519	1.2e-202	712.2	Lactobacillaceae	pheS	GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576	6.1.1.20	ko:K01889	ko00970,map00970	M00359,M00360	R03660	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016				Bacteria	1TPFW@1239,3F4NT@33958,4HAVN@91061,COG0016@1,COG0016@2	NA|NA|NA	J	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
PAKBJLMI_01151	272621.LBA1520	4.7e-63	246.9	Lactobacillaceae	yodB												Bacteria	1VBI7@1239,3F7FK@33958,4HKBR@91061,COG1733@1,COG1733@2	NA|NA|NA	K	Transcriptional regulator, HxlR family
PAKBJLMI_01152	272621.LBA1521	1.9e-138	498.4	Lactobacillaceae	spoU		2.1.1.185	ko:K03218,ko:K03437					ko00000,ko01000,ko03009,ko03016				Bacteria	1V3JP@1239,3F3NF@33958,4HCF5@91061,COG0566@1,COG0566@2	NA|NA|NA	J	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PAKBJLMI_01153	272621.LBA1522	7.6e-45	186.0	Lactobacillaceae	acyP	GO:0003674,GO:0003824,GO:0003998,GO:0006950,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0016787,GO:0016817,GO:0016818,GO:0050896	3.6.1.7	ko:K01512	ko00620,ko00627,ko01120,map00620,map00627,map01120		R00317,R01421,R01515	RC00043	ko00000,ko00001,ko01000			iSB619.SA_RS07020,iSBO_1134.SBO_2263,iSF_1195.SF0969,iSFxv_1172.SFxv_1053,iS_1188.S1036	Bacteria	1VEM9@1239,3F81R@33958,4HNN7@91061,COG1254@1,COG1254@2	NA|NA|NA	C	Belongs to the acylphosphatase family
PAKBJLMI_01154	272621.LBA1523	4.3e-159	567.4	Lactobacillaceae	yidC			ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335			ko00000,ko00001,ko00002,ko02044,ko03029	2.A.9			Bacteria	1TSDN@1239,3F3P3@33958,4HCC8@91061,COG0706@1,COG0706@2	NA|NA|NA	U	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PAKBJLMI_01155	272621.LBA1524	1.9e-249	868.2	Lactobacillaceae	arlS	GO:0003674,GO:0003824,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0043170,GO:0044238,GO:0070011,GO:0071704,GO:0140096,GO:1901564	2.7.13.3	ko:K18940	ko02020,map02020	M00716,M00717			ko00000,ko00001,ko00002,ko01000,ko01001,ko02022				Bacteria	1TPSK@1239,3F3NU@33958,4HAH5@91061,COG5002@1,COG5002@2	NA|NA|NA	T	Histidine kinase
PAKBJLMI_01156	272621.LBA1525	2.5e-127	461.5	Lactobacillaceae													Bacteria	1TS81@1239,3F421@33958,4H9NE@91061,COG0745@1,COG0745@2	NA|NA|NA	K	response regulator
PAKBJLMI_01157	272621.LBA1526	4.1e-98	364.0	Lactobacillaceae	yceD	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0040007,GO:0044424,GO:0044444,GO:0044464		ko:K07040					ko00000				Bacteria	1VB08@1239,3F61Z@33958,4HME9@91061,COG1399@1,COG1399@2	NA|NA|NA	S	Uncharacterized ACR, COG1399
PAKBJLMI_01158	272621.LBA1527	2.7e-216	757.7	Lactobacillaceae	ylbM												Bacteria	1TPP2@1239,3F3QC@33958,4HAZJ@91061,COG1323@1,COG1323@2	NA|NA|NA	S	Belongs to the UPF0348 family
PAKBJLMI_01159	272621.LBA1528	5.3e-59	233.4	Lactobacillaceae	rsfS	GO:0003674,GO:0005488,GO:0006417,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0017148,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0034248,GO:0034249,GO:0043021,GO:0043023,GO:0044087,GO:0044877,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0080090,GO:0090069,GO:0090071,GO:2000112,GO:2000113		ko:K09710					ko00000,ko03009				Bacteria	1VA2Z@1239,3F7QN@33958,4HKEJ@91061,COG0799@1,COG0799@2	NA|NA|NA	J	Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
PAKBJLMI_01160	272621.LBA1529	1.4e-112	412.1	Lactobacillaceae	nadD		2.7.6.3,2.7.7.18	ko:K00950,ko:K00969,ko:K06950	ko00760,ko00790,ko01100,map00760,map00790,map01100	M00115,M00126,M00841	R00137,R03005,R03503	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000				Bacteria	1V6Y1@1239,3F47C@33958,4HHRY@91061,COG1713@1,COG1713@2	NA|NA|NA	H	Hydrolase, HD family
PAKBJLMI_01161	272621.LBA1530	5.2e-124	450.3	Lactobacillaceae	nadD	GO:0000309,GO:0003674,GO:0003824,GO:0004515,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0040007,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605	2.7.7.18,3.6.1.55	ko:K00969,ko:K03574	ko00760,ko01100,map00760,map01100	M00115	R00137,R03005	RC00002	ko00000,ko00001,ko00002,ko01000,ko03400				Bacteria	1V3SK@1239,3F4D6@33958,4HGXK@91061,COG1057@1,COG1057@2	NA|NA|NA	H	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
PAKBJLMI_01162	272621.LBA1531	1e-212	745.7	Lactobacillaceae	yqeH	GO:0003674,GO:0003824,GO:0003924,GO:0006275,GO:0008150,GO:0008156,GO:0009889,GO:0009890,GO:0009892,GO:0010556,GO:0010558,GO:0010605,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0019219,GO:0019222,GO:0022613,GO:0030174,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032297,GO:0042254,GO:0044085,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051052,GO:0051053,GO:0051171,GO:0051172,GO:0060255,GO:0065007,GO:0071840,GO:0080090,GO:0090329,GO:2000104,GO:2000112,GO:2000113		ko:K06948					ko00000,ko03009				Bacteria	1TPM2@1239,3F4JU@33958,4HAAF@91061,COG1161@1,COG1161@2	NA|NA|NA	S	Ribosome biogenesis GTPase YqeH
PAKBJLMI_01163	272621.LBA1532	1.6e-93	349.0	Lactobacillaceae	yqeG			ko:K07015					ko00000				Bacteria	1V6KM@1239,3F46V@33958,4HGAV@91061,COG2179@1,COG2179@2	NA|NA|NA	S	HAD phosphatase, family IIIA
PAKBJLMI_01164	97137.C821_01033	1.9e-198	698.4	Lactobacillaceae	tnpB			ko:K07496					ko00000				Bacteria	1TRNY@1239,3F431@33958,4HBKP@91061,COG0675@1,COG0675@2	NA|NA|NA	L	Putative transposase DNA-binding domain
PAKBJLMI_01165	272621.LBA1535	3.5e-188	664.1	Lactobacillaceae	add		3.5.4.4	ko:K01488	ko00230,ko01100,ko05340,map00230,map01100,map05340		R01560,R02556	RC00477	ko00000,ko00001,ko01000			iHN637.CLJU_RS13960	Bacteria	1U44B@1239,3F5RC@33958,4HCES@91061,COG1816@1,COG1816@2	NA|NA|NA	F	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
PAKBJLMI_01166	272621.LBA1536	1e-57	229.2	Lactobacillaceae	rplT	GO:0000027,GO:0000900,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006355,GO:0006412,GO:0006417,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015934,GO:0016020,GO:0016043,GO:0017148,GO:0019219,GO:0019222,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0030371,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045182,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0051252,GO:0060255,GO:0065003,GO:0065007,GO:0070180,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0080090,GO:0090079,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903506,GO:1990904,GO:2000112,GO:2000113,GO:2001141		ko:K02887	ko03010,map03010	M00178			br01610,ko00000,ko00001,ko00002,ko03011				Bacteria	1V6DB@1239,3F6HZ@33958,4HH2W@91061,COG0292@1,COG0292@2	NA|NA|NA	J	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
PAKBJLMI_01167	272621.LBA1537	2.1e-28	131.0	Lactobacillaceae	rpmI	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904		ko:K02916	ko03010,map03010	M00178			br01610,ko00000,ko00001,ko00002,ko03011				Bacteria	1VF5W@1239,3F7CQ@33958,4HNIQ@91061,COG0291@1,COG0291@2	NA|NA|NA	J	Belongs to the bacterial ribosomal protein bL35 family
PAKBJLMI_01168	272621.LBA1538	3.7e-73	280.8	Lactobacillaceae	infC	GO:0000049,GO:0001731,GO:0002181,GO:0002183,GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006412,GO:0006413,GO:0006417,GO:0006446,GO:0006518,GO:0006807,GO:0006950,GO:0006996,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009266,GO:0009409,GO:0009628,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0016020,GO:0016043,GO:0019222,GO:0019538,GO:0022411,GO:0022607,GO:0022613,GO:0022618,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031334,GO:0032268,GO:0032270,GO:0032790,GO:0032984,GO:0032988,GO:0032991,GO:0034248,GO:0034250,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0043021,GO:0043022,GO:0043024,GO:0043043,GO:0043170,GO:0043254,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0045727,GO:0045948,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065003,GO:0065007,GO:0070992,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0080090,GO:0097159,GO:1901193,GO:1901195,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903008,GO:1904688,GO:1904690,GO:1990856,GO:1990904,GO:2000112,GO:2000765,GO:2000767		ko:K02520					ko00000,ko03012,ko03029				Bacteria	1V1RC@1239,3F4MS@33958,4HFUS@91061,COG0290@1,COG0290@2	NA|NA|NA	J	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
PAKBJLMI_01169	272621.LBA1539	3.2e-92	344.4	Lactobacillaceae													Bacteria	1U5FC@1239,29NRA@1,309P8@2,3F5US@33958,4IF6Y@91061	NA|NA|NA		
PAKBJLMI_01170	272621.LBA1541	5.7e-71	273.5	Lactobacillaceae													Bacteria	1U66T@1239,2A0WQ@1,30P1T@2,3F77R@33958,4IFX9@91061	NA|NA|NA	S	Protein of unknown function (DUF3021)
PAKBJLMI_01171	272621.LBA1542	5.6e-74	283.5	Lactobacillaceae													Bacteria	1VD10@1239,3F6QC@33958,4HMF3@91061,COG3279@1,COG3279@2	NA|NA|NA	K	LytTr DNA-binding domain
PAKBJLMI_01172	272621.LBA1543	0.0	1291.9	Lactobacillaceae	thrS	GO:0003674,GO:0003824,GO:0004812,GO:0004829,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006435,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576	6.1.1.3	ko:K01868	ko00970,map00970	M00359,M00360	R03663	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016				Bacteria	1TP78@1239,3F3TC@33958,4HABZ@91061,COG0441@1,COG0441@2	NA|NA|NA	J	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
PAKBJLMI_01173	272621.LBA1544	6.9e-167	593.2	Lactobacillaceae	dnaI	GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0034641,GO:0034645,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576,GO:1990837		ko:K11144					ko00000,ko03032				Bacteria	1TPZX@1239,3F4JK@33958,4HABS@91061,COG1484@1,COG1484@2	NA|NA|NA	L	Primosomal protein DnaI
PAKBJLMI_01174	272621.LBA1545	1.7e-251	874.8	Lactobacillaceae	dnaB			ko:K03346					ko00000,ko03032				Bacteria	1TSBB@1239,3FB6I@33958,4HE63@91061,COG3611@1,COG3611@2	NA|NA|NA	L	Replication initiation and membrane attachment
PAKBJLMI_01175	272621.LBA1546	2.7e-82	311.2	Lactobacillaceae	nrdR	GO:0000166,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008144,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0017076,GO:0019219,GO:0019222,GO:0030554,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141		ko:K07738					ko00000,ko03000				Bacteria	1V3JA@1239,3F65S@33958,4HGXA@91061,COG1327@1,COG1327@2	NA|NA|NA	K	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
PAKBJLMI_01176	272621.LBA1548	6.9e-107	393.3	Lactobacillaceae	coaE		2.7.1.24	ko:K00859	ko00770,ko01100,map00770,map01100	M00120	R00130	RC00002,RC00078	ko00000,ko00001,ko00002,ko01000				Bacteria	1V6FS@1239,3F6WF@33958,4HII3@91061,COG0237@1,COG0237@2	NA|NA|NA	F	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
PAKBJLMI_01177	272621.LBA1549	4.8e-159	567.0	Lactobacillaceae	fpg		3.2.2.23,4.2.99.18	ko:K10563	ko03410,map03410				ko00000,ko00001,ko01000,ko03400				Bacteria	1TPM9@1239,3F43E@33958,4H9Q7@91061,COG0266@1,COG0266@2	NA|NA|NA	L	Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
PAKBJLMI_01178	272621.LBA1550	0.0	1743.8	Lactobacillaceae	polA	GO:0003674,GO:0003824,GO:0003887,GO:0004518,GO:0004527,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008409,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0018130,GO:0019438,GO:0030312,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0040007,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0071944,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901362,GO:1901576	2.7.7.7	ko:K02335	ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440		R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko01000,ko03032,ko03400				Bacteria	1TPKJ@1239,3F3ZA@33958,4H9S7@91061,COG0258@1,COG0258@2,COG0749@1,COG0749@2	NA|NA|NA	L	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
PAKBJLMI_01179	272621.LBA1551	5.3e-250	869.8	Lactobacillaceae	purD		6.3.4.13	ko:K01945	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	M00048	R04144	RC00090,RC00166	ko00000,ko00001,ko00002,ko01000			iSB619.SA_RS05245,iYO844.BSU06530	Bacteria	1UHN9@1239,3F4Z8@33958,4HA70@91061,COG0151@1,COG0151@2	NA|NA|NA	F	Belongs to the GARS family
PAKBJLMI_01180	272621.LBA1552	5e-295	1019.6	Lactobacillaceae	purH	GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0044464,GO:0071944	2.1.2.3,3.5.4.10	ko:K00602	ko00230,ko00670,ko01100,ko01110,ko01130,ko01523,map00230,map00670,map01100,map01110,map01130,map01523	M00048	R01127,R04560	RC00026,RC00263,RC00456	ko00000,ko00001,ko00002,ko01000,ko04147			iJN678.purH	Bacteria	1TPQ5@1239,3F4FD@33958,4H9YY@91061,COG0138@1,COG0138@2	NA|NA|NA	F	Bifunctional purine biosynthesis protein PurH
PAKBJLMI_01181	272621.LBA1553	2.7e-111	407.9	Lactobacillaceae	purN		2.1.2.2	ko:K11175	ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130	M00048	R04325,R04326	RC00026,RC00197,RC01128	ko00000,ko00001,ko00002,ko01000				Bacteria	1V3RJ@1239,3F3UN@33958,4HGY5@91061,COG0299@1,COG0299@2	NA|NA|NA	F	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
PAKBJLMI_01182	272621.LBA1554	2e-199	701.4	Lactobacillaceae	purM	GO:0003674,GO:0003824,GO:0004641,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016882,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	6.3.3.1,6.3.4.13	ko:K01933,ko:K11788	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	M00048	R04144,R04208	RC00090,RC00166,RC01100	ko00000,ko00001,ko00002,ko01000			iAF987.Gmet_1844,iECSF_1327.ECSF_2340	Bacteria	1TP9J@1239,3F4RT@33958,4HABW@91061,COG0150@1,COG0150@2	NA|NA|NA	F	Phosphoribosylformylglycinamidine cyclo-ligase
PAKBJLMI_01183	272621.LBA1555	1.5e-277	961.4	Lactobacillaceae	purF	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009507,GO:0009536,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464	2.4.2.14	ko:K00764	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	M00048	R01072	RC00010,RC02724,RC02752	ko00000,ko00001,ko00002,ko01000,ko01002			iSB619.SA_RS05225	Bacteria	1TPH3@1239,3F3U7@33958,4HAXU@91061,COG0034@1,COG0034@2	NA|NA|NA	F	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
PAKBJLMI_01184	272621.LBA1556	0.0	1502.6	Lactobacillaceae	purL	GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0004642,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0017076,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046390,GO:0046483,GO:0046872,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576	6.3.5.3	ko:K01952	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	M00048	R04463	RC00010,RC01160	ko00000,ko00001,ko00002,ko01000				Bacteria	1TPAS@1239,3F4IQ@33958,4HB3N@91061,COG0046@1,COG0046@2	NA|NA|NA	F	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PAKBJLMI_01185	272621.LBA1557	6.1e-128	463.4	Lactobacillaceae	purQ	GO:0003674,GO:0003824,GO:0004642,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016020,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0040007,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	6.3.5.3	ko:K01952	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	M00048	R04463	RC00010,RC01160	ko00000,ko00001,ko00002,ko01000				Bacteria	1TP1B@1239,3F48D@33958,4HAKZ@91061,COG0047@1,COG0047@2	NA|NA|NA	F	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PAKBJLMI_01186	272621.LBA1558	7.6e-39	166.0	Lactobacillaceae	purS		6.3.2.6,6.3.5.3	ko:K01923,ko:K01952	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	M00048	R04463,R04591	RC00010,RC00064,RC00162,RC01160	ko00000,ko00001,ko00002,ko01000			iYO844.BSU06460	Bacteria	1VEH1@1239,3F81F@33958,4HP0E@91061,COG1828@1,COG1828@2	NA|NA|NA	F	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PAKBJLMI_01187	272621.LBA1559	2.1e-134	485.0	Lactobacillaceae	purC	GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016874,GO:0016879,GO:0016881,GO:0044424,GO:0044444,GO:0044464	4.1.1.21,4.3.2.2,6.3.2.6	ko:K01587,ko:K01756,ko:K01923	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	M00048,M00049	R01083,R04209,R04559,R04591	RC00064,RC00162,RC00379,RC00444,RC00445,RC00590	ko00000,ko00001,ko00002,ko01000			iAF1260.b2476,iB21_1397.B21_02330,iBWG_1329.BWG_2240,iE2348C_1286.E2348C_2713,iEC042_1314.EC042_2677,iEC55989_1330.EC55989_2759,iECABU_c1320.ECABU_c27880,iECBD_1354.ECBD_1213,iECB_1328.ECB_02368,iECDH10B_1368.ECDH10B_2642,iECDH1ME8569_1439.ECDH1ME8569_2402,iECDH1ME8569_1439.EcDH1_1193,iECD_1391.ECD_02368,iECED1_1282.ECED1_2911,iECH74115_1262.ECH74115_3698,iECIAI1_1343.ECIAI1_2527,iECNA114_1301.ECNA114_2561,iECO103_1326.ECO103_2988,iECO111_1330.ECO111_3199,iECO26_1355.ECO26_3522,iECOK1_1307.ECOK1_2784,iECP_1309.ECP_2490,iECS88_1305.ECS88_2658,iECSE_1348.ECSE_2760,iECSF_1327.ECSF_2329,iECSP_1301.ECSP_3415,iECUMN_1333.ECUMN_2789,iECW_1372.ECW_m2698,iECs_1301.ECs3338,iEKO11_1354.EKO11_1259,iETEC_1333.ETEC_2581,iEcDH1_1363.EcDH1_1193,iEcE24377_1341.EcE24377A_2757,iEcHS_1320.EcHS_A2607,iEcSMS35_1347.EcSMS35_2623,iEcolC_1368.EcolC_1200,iG2583_1286.G2583_2999,iJN746.PP_1240,iJO1366.b2476,iJR904.b2476,iLF82_1304.LF82_1775,iNRG857_1313.NRG857_12360,iSFV_1184.SFV_2521,iSF_1195.SF2519,iSFxv_1172.SFxv_2773,iS_1188.S2669,iSbBS512_1146.SbBS512_E2848,iUMNK88_1353.UMNK88_3071,iWFL_1372.ECW_m2698,iY75_1357.Y75_RS12925,iYL1228.KPN_02810,iZ_1308.Z3735	Bacteria	1TP11@1239,3F44Z@33958,4H9U8@91061,COG0152@1,COG0152@2	NA|NA|NA	F	Belongs to the SAICAR synthetase family
PAKBJLMI_01188	272621.LBA1560	1.5e-70	271.9	Lactobacillaceae	purK	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464	6.3.4.18	ko:K01589	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	M00048	R07404	RC01927	ko00000,ko00001,ko00002,ko01000				Bacteria	1TQCD@1239,3F3YV@33958,4H9M5@91061,COG0026@1,COG0026@2	NA|NA|NA	F	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
PAKBJLMI_01189	891391.LAC30SC_08470	8.2e-126	456.4	Lactobacillaceae	purK	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464	6.3.4.18	ko:K01589	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	M00048	R07404	RC01927	ko00000,ko00001,ko00002,ko01000				Bacteria	1TQCD@1239,3F3YV@33958,4H9M5@91061,COG0026@1,COG0026@2	NA|NA|NA	F	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
PAKBJLMI_01190	272621.LBA1561	9.6e-83	312.8	Lactobacillaceae	purE	GO:0003674,GO:0003824,GO:0004638,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0016853,GO:0016866,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034023,GO:0034641,GO:0034654,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	5.4.99.18	ko:K01588	ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130	M00048	R07405	RC01947	ko00000,ko00001,ko00002,ko01000			iETEC_1333.ETEC_0575,iJN746.PP_5336,iPC815.YPO3076,iUTI89_1310.UTI89_C0551	Bacteria	1V1MV@1239,3F6P0@33958,4HFR7@91061,COG0041@1,COG0041@2	NA|NA|NA	F	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
PAKBJLMI_01191	272621.LBA1562	0.0	1100.9	Lactobacillaceae	fhs	GO:0003674,GO:0003824,GO:0004329,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006144,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009112,GO:0009113,GO:0009256,GO:0009257,GO:0009396,GO:0009987,GO:0016053,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0016874,GO:0016879,GO:0018130,GO:0019238,GO:0019438,GO:0019752,GO:0034641,GO:0042398,GO:0042440,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046112,GO:0046148,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:0072522,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	6.3.4.3	ko:K01938	ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200	M00140,M00377	R00943	RC00026,RC00111	ko00000,ko00001,ko00002,ko01000				Bacteria	1TP6N@1239,3F3U6@33958,4HA2X@91061,COG2759@1,COG2759@2	NA|NA|NA	F	Belongs to the formate--tetrahydrofolate ligase family
PAKBJLMI_01192	272621.LBA1563	1.1e-124	452.6	Lactobacillaceae	darA												Bacteria	1V45R@1239,3F7P2@33958,4HQY8@91061,COG0716@1,COG0716@2	NA|NA|NA	C	Flavodoxin
PAKBJLMI_01193	272621.LBA1564	9.7e-142	509.6	Lactobacillaceae	qmcA	GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944											Bacteria	1TPXU@1239,3F4HV@33958,4HGRC@91061,COG0330@1,COG0330@2	NA|NA|NA	O	prohibitin homologues
PAKBJLMI_01194	272621.LBA1565	1.1e-50	205.7	Lactobacillaceae				ko:K07473					ko00000,ko02048				Bacteria	1VGJW@1239,3F6PK@33958,4HR7A@91061,COG3077@1,COG3077@2	NA|NA|NA	L	RelB antitoxin
PAKBJLMI_01195	272621.LBA1566	2.4e-194	684.5	Lactobacillaceae													Bacteria	1U53C@1239,29NJD@1,309H9@2,3F4BP@33958,4IEUN@91061	NA|NA|NA	S	Bacteriocin helveticin-J
PAKBJLMI_01196	272621.LBA1567	7.9e-293	1012.3	Lactobacillaceae													Bacteria	1U6PC@1239,3F557@33958,4HDA6@91061,COG0308@1,COG0308@2	NA|NA|NA	M	Peptidase family M1 domain
PAKBJLMI_01197	272621.LBA1568	3.2e-178	630.9	Lactobacillaceae													Bacteria	1U5FS@1239,29NRF@1,309PE@2,3F5V8@33958,4IF75@91061	NA|NA|NA	S	SLAP domain
PAKBJLMI_01198	272621.LBA1487	1.2e-219	768.8	Lactobacillaceae				ko:K07496					ko00000				Bacteria	1TRNY@1239,3F431@33958,4HBKP@91061,COG0675@1,COG0675@2	NA|NA|NA	L	Putative transposase DNA-binding domain
PAKBJLMI_01199	272621.LBA1571	2.9e-238	830.9	Lactobacillaceae	mepA			ko:K18908		M00705			ko00000,ko00002,ko01504,ko02000	2.A.66.1.13			Bacteria	1TPFM@1239,3F3KX@33958,4HEHY@91061,COG0534@1,COG0534@2	NA|NA|NA	V	MATE efflux family protein
PAKBJLMI_01200	272621.LBA1572	6.6e-167	593.2	Lactobacillaceae	rocF		3.5.3.1,3.5.3.11	ko:K01476,ko:K01480	ko00220,ko00330,ko01100,ko01110,ko01130,ko01230,ko05146,map00220,map00330,map01100,map01110,map01130,map01230,map05146	M00029,M00133,M00134	R00551,R01157	RC00024,RC00329	ko00000,ko00001,ko00002,ko01000				Bacteria	1V45X@1239,3F628@33958,4HU4J@91061,COG0010@1,COG0010@2	NA|NA|NA	E	Arginase family
PAKBJLMI_01201	272621.LBA1573	1.8e-92	345.5	Lactobacillaceae													Bacteria	1V7I4@1239,3F59G@33958,4HJ3U@91061,COG2364@1,COG2364@2	NA|NA|NA	S	Membrane
PAKBJLMI_01202	272621.LBA1574	3.1e-294	1016.9	Lactobacillaceae	bglH		3.2.1.86	ko:K01223	ko00010,ko00500,map00010,map00500		R00839,R05133,R05134	RC00049,RC00171,RC00714	ko00000,ko00001,ko01000		GT1		Bacteria	1TP19@1239,3F3PQ@33958,4HA1W@91061,COG2723@1,COG2723@2	NA|NA|NA	G	Belongs to the glycosyl hydrolase 1 family
PAKBJLMI_01203	272621.LBA1575	5.5e-295	1019.6	Lactobacillaceae				ko:K02755,ko:K02757	ko02060,map02060	M00271			ko00000,ko00001,ko00002,ko01000,ko02000	4.A.1.2.11,4.A.1.2.2,4.A.1.2.5,4.A.1.2.6			Bacteria	1TP5X@1239,3F458@33958,4HA0I@91061,COG1263@1,COG1263@2,COG2190@1,COG2190@2	NA|NA|NA	G	phosphotransferase system
PAKBJLMI_01204	272621.LBA1576	1.2e-29	135.2	Bacteria			2.7.1.208,2.7.1.211	ko:K02749,ko:K02750,ko:K02755,ko:K02756,ko:K02757,ko:K02808,ko:K02809,ko:K02810	ko00500,ko02060,map00500,map02060	M00268,M00269,M00271	R00811,R04111	RC00017,RC03206	ko00000,ko00001,ko00002,ko01000,ko02000	4.A.1.1.10,4.A.1.1.16,4.A.1.1.4,4.A.1.1.8,4.A.1.2.1,4.A.1.2.10,4.A.1.2.11,4.A.1.2.12,4.A.1.2.2,4.A.1.2.5,4.A.1.2.6,4.A.1.2.9			Bacteria	COG1264@1,COG1264@2	NA|NA|NA	G	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
PAKBJLMI_01205	272621.LBA1577	1.7e-148	531.9	Bacilli	ybbH			ko:K03481					ko00000,ko03000				Bacteria	1V00A@1239,4IQVY@91061,COG1737@1,COG1737@2	NA|NA|NA	K	Helix-turn-helix domain, rpiR family
PAKBJLMI_01206	272621.LBA1578	0.0	1351.7	Lactobacillaceae													Bacteria	1U5Z9@1239,29V6Q@1,309ZA@2,3F6R6@33958,4IFN9@91061	NA|NA|NA		
PAKBJLMI_01207	272621.LBA1579	4.8e-254	883.2	Lactobacillaceae	mpl	GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0016874,GO:0016879,GO:0016881,GO:0042802,GO:0044424,GO:0044464	6.3.2.4,6.3.2.45,6.3.2.8	ko:K01921,ko:K01924,ko:K02558	ko00471,ko00473,ko00550,ko01100,ko01502,map00471,map00473,map00550,map01100,map01502		R01150,R03193	RC00064,RC00141	ko00000,ko00001,ko01000,ko01011			iSDY_1059.SDY_4251	Bacteria	1TQ5H@1239,3F49J@33958,4HAR4@91061,COG0773@1,COG0773@2	NA|NA|NA	M	Belongs to the MurCDEF family
PAKBJLMI_01208	272621.LBA1580	7.4e-123	446.4	Lactobacillaceae	pheT	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494	6.1.1.20	ko:K01890,ko:K06878	ko00970,map00970	M00359,M00360	R03660	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016				Bacteria	1V7QA@1239,3FBJ0@33958,4HJBD@91061,COG0073@1,COG0073@2	NA|NA|NA	J	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PAKBJLMI_01209	272621.LBA1581	1.1e-53	215.7	Lactobacillaceae	ytpP	GO:0003674,GO:0003824,GO:0004791,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0015035,GO:0015036,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0016671,GO:0019725,GO:0033554,GO:0034599,GO:0042221,GO:0042592,GO:0044424,GO:0044444,GO:0044464,GO:0045454,GO:0047134,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748	2.7.1.180,5.3.4.1	ko:K01829,ko:K03671,ko:K03734,ko:K06196	ko04621,ko05418,map04621,map05418				ko00000,ko00001,ko01000,ko02000,ko03110	5.A.1.2			Bacteria	1VAS6@1239,3F72K@33958,4HKGM@91061,COG0526@1,COG0526@2	NA|NA|NA	CO	Thioredoxin
PAKBJLMI_01210	272621.LBA1582	1.5e-126	458.8	Lactobacillaceae	trmB	GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008176,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0034708,GO:0036265,GO:0040007,GO:0043170,GO:0043412,GO:0043414,GO:0043527,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0106004,GO:0140098,GO:0140101,GO:1901360,GO:1902494,GO:1990234	2.1.1.297,2.1.1.33	ko:K02493,ko:K03439			R10806	RC00003,RC03279	ko00000,ko01000,ko03012,ko03016				Bacteria	1TQCA@1239,3F3QM@33958,4HC08@91061,COG0220@1,COG0220@2	NA|NA|NA	J	Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
PAKBJLMI_01211	272621.LBA1584	7.4e-201	706.4	Lactobacillaceae	ecsB			ko:K01992		M00254			ko00000,ko00002,ko02000	3.A.1			Bacteria	1V1VG@1239,3F4HH@33958,4HG1K@91061,COG4473@1,COG4473@2	NA|NA|NA	U	ABC transporter
PAKBJLMI_01212	272621.LBA1585	2e-135	488.4	Lactobacillaceae	ecsA			ko:K01990		M00254			ko00000,ko00002,ko02000	3.A.1			Bacteria	1TQIH@1239,3F444@33958,4HA2B@91061,COG1131@1,COG1131@2	NA|NA|NA	V	ABC transporter, ATP-binding protein
PAKBJLMI_01213	272621.LBA1586	2.8e-78	297.7	Lactobacillaceae	hit			ko:K02503					ko00000,ko04147				Bacteria	1V9ZJ@1239,3FCD7@33958,4HJ19@91061,COG0537@1,COG0537@2	NA|NA|NA	FG	Scavenger mRNA decapping enzyme C-term binding
PAKBJLMI_01214	272621.LBA1587	1.4e-56	225.3	Lactobacillaceae													Bacteria	1U65N@1239,29P5R@1,30A3W@2,3F74E@33958,4IFVH@91061	NA|NA|NA		
PAKBJLMI_01215	272621.LBA1588	1.1e-148	532.7	Lactobacillaceae	prsA		5.2.1.8	ko:K02597,ko:K07533					ko00000,ko01000,ko03110				Bacteria	1TX3R@1239,3FB3Y@33958,4HC85@91061,COG0760@1,COG0760@2	NA|NA|NA	M	Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
PAKBJLMI_01216	272621.LBA1589	8.4e-187	659.4	Lactobacillaceae	cbf			ko:K03698					ko00000,ko01000,ko03019				Bacteria	1TPIU@1239,3F4SF@33958,4HB1M@91061,COG3481@1,COG3481@2	NA|NA|NA	S	Metal dependent phosphohydrolases with conserved 'HD' motif.
PAKBJLMI_01217	272621.LBA1590	0.0	1358.2	Lactobacillaceae													Bacteria	1TQP3@1239,3F3PF@33958,4HBCA@91061,COG0419@1,COG0419@2,COG4717@1,COG4717@2	NA|NA|NA	L	AAA domain
PAKBJLMI_01218	272621.LBA1591	2.4e-231	807.7	Lactobacillaceae	yhaO			ko:K03547					ko00000,ko03400				Bacteria	1TWMI@1239,3F3PX@33958,4HCA0@91061,COG0420@1,COG0420@2	NA|NA|NA	L	Ser Thr phosphatase family protein
PAKBJLMI_01219	272621.LBA1592	6.8e-54	216.5	Lactobacillaceae	yheA												Bacteria	1VASS@1239,3F822@33958,4HKKC@91061,COG3679@1,COG3679@2	NA|NA|NA	S	Belongs to the UPF0342 family
PAKBJLMI_01220	272621.LBA1593	0.0	1340.9	Lactobacillaceae	pbp2A		2.4.1.129,3.4.16.4	ko:K05365,ko:K05366,ko:K12555,ko:K21464	ko00550,ko01100,ko01501,map00550,map01100,map01501		R04519	RC00005,RC00049	ko00000,ko00001,ko01000,ko01003,ko01011		GT51		Bacteria	1TPM5@1239,3F49Q@33958,4H9SA@91061,COG0744@1,COG0744@2	NA|NA|NA	M	penicillin-binding protein
PAKBJLMI_01221	272621.LBA1594	2.5e-163	581.3	Lactobacillaceae	rluA	GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360	5.4.99.23	ko:K06180					ko00000,ko01000,ko03009				Bacteria	1TSM6@1239,3F50K@33958,4HA7M@91061,COG0564@1,COG0564@2	NA|NA|NA	J	Responsible for synthesis of pseudouridine from uracil
PAKBJLMI_01222	272621.LBA1595	1.6e-140	505.4	Lactobacillaceae	glpF			ko:K02440					ko00000,ko02000	1.A.8.1,1.A.8.2			Bacteria	1TP4T@1239,3F4J6@33958,4HAWP@91061,COG0580@1,COG0580@2	NA|NA|NA	U	Belongs to the MIP aquaporin (TC 1.A.8) family
PAKBJLMI_01223	272621.LBA1597	6.8e-119	433.3	Lactobacillaceae													Bacteria	1U6U1@1239,29PNJ@1,30AKS@2,3F8HJ@33958,4IGMV@91061	NA|NA|NA		
PAKBJLMI_01224	272621.LBA1598	4.1e-192	677.2	Lactobacillaceae			5.3.3.2	ko:K01823	ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130	M00095,M00096,M00364,M00365,M00366,M00367	R01123	RC00455	ko00000,ko00001,ko00002,ko01000				Bacteria	1TPC4@1239,3F577@33958,4HJM8@91061,COG1304@1,COG1304@2	NA|NA|NA	C	FMN-dependent dehydrogenase
PAKBJLMI_01225	272621.LBA1599	2.3e-170	604.7	Lactobacillaceae	fba		4.1.2.13,4.1.2.29	ko:K01624,ko:K03339	ko00010,ko00030,ko00051,ko00562,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00562,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230	M00001,M00003,M00165,M00167,M00344,M00345	R01068,R01070,R01829,R02568,R05378	RC00438,RC00439,RC00603,RC00604,RC00721	ko00000,ko00001,ko00002,ko01000				Bacteria	1TQ01@1239,3F4EF@33958,4H9ZU@91061,COG0191@1,COG0191@2	NA|NA|NA	G	Fructose-1,6-bisphosphate aldolase, class II
PAKBJLMI_01226	272621.LBA1600	0.0	1127.1	Lactobacillaceae	argS	GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576	6.1.1.19	ko:K01887	ko00970,map00970	M00359,M00360	R03646	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029				Bacteria	1TPEZ@1239,3F4DE@33958,4HAR3@91061,COG0018@1,COG0018@2	NA|NA|NA	J	Arginyl-tRNA synthetase
PAKBJLMI_01227	272621.LBA1601	6.9e-127	459.9	Lactobacillaceae													Bacteria	1V4KP@1239,3F6PH@33958,4HIBF@91061,COG1376@1,COG1376@2	NA|NA|NA	M	ErfK YbiS YcfS YnhG
PAKBJLMI_01228	272621.LBA1602	1.8e-153	548.5	Lactobacillaceae	nnrD		4.2.1.136,5.1.99.6	ko:K17758,ko:K17759					ko00000,ko01000				Bacteria	1TNZE@1239,3F480@33958,4HBZC@91061,COG0063@1,COG0063@2	NA|NA|NA	H	Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
PAKBJLMI_01229	272621.LBA1603	1.7e-243	848.2	Lactobacillaceae	dacA	GO:0003674,GO:0003824,GO:0004175,GO:0004180,GO:0004185,GO:0005575,GO:0005618,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0008238,GO:0009002,GO:0016787,GO:0017171,GO:0019538,GO:0030312,GO:0043170,GO:0044238,GO:0044464,GO:0070008,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564	3.4.16.4	ko:K01286,ko:K07258	ko00550,ko01100,map00550,map01100				ko00000,ko00001,ko01000,ko01002,ko01011				Bacteria	1TQN0@1239,3F43S@33958,4HBD4@91061,COG1686@1,COG1686@2	NA|NA|NA	M	Belongs to the peptidase S11 family
PAKBJLMI_01231	272621.LBA1604	6.4e-54	216.5	Lactobacillaceae	pspC			ko:K03973					ko00000,ko02048,ko03000				Bacteria	1VKBQ@1239,3F87Y@33958,4HRGW@91061,COG1983@1,COG1983@2	NA|NA|NA	KT	PspC domain
PAKBJLMI_01232	272621.LBA1605	5.5e-197	693.3	Lactobacillaceae													Bacteria	1V4BS@1239,3F3QN@33958,4HJRT@91061,COG1680@1,COG1680@2	NA|NA|NA	V	Beta-lactamase
PAKBJLMI_01233	272621.LBA1606	3e-54	217.6	Lactobacillaceae	yvlA												Bacteria	1VIUB@1239,2DZIG@1,32VBI@2,3F7EN@33958,4HRZP@91061	NA|NA|NA		
PAKBJLMI_01234	272621.LBA1607	7e-258	896.0	Lactobacillaceae	psd		4.1.1.65	ko:K01613	ko00564,ko01100,ko01110,map00564,map01100,map01110	M00093	R02055	RC00299	ko00000,ko00001,ko00002,ko01000				Bacteria	1TR34@1239,3F5QB@33958,4HB6I@91061,COG0688@1,COG0688@2	NA|NA|NA	I	Belongs to the phosphatidylserine decarboxylase family
PAKBJLMI_01235	272621.LBA1608	9.1e-40	169.1	Lactobacillaceae													Bacteria	1U6CG@1239,2DKPU@1,30A92@2,3F7KQ@33958,4IG45@91061	NA|NA|NA	S	Enterocin A Immunity
PAKBJLMI_01236	272621.LBA1609	7.5e-288	995.7	Lactobacillaceae													Bacteria	1UI9B@1239,3F4PT@33958,4ISGS@91061,COG3266@1,COG3266@2	NA|NA|NA	S	domain, Protein
PAKBJLMI_01237	272621.LBA1609	8.7e-73	279.6	Lactobacillaceae													Bacteria	1UI9B@1239,3F4PT@33958,4ISGS@91061,COG3266@1,COG3266@2	NA|NA|NA	S	domain, Protein
PAKBJLMI_01238	272621.LBA1610	3.8e-80	303.9	Lactobacillaceae	yphH												Bacteria	1TRVH@1239,3F6JT@33958,4HGCZ@91061,COG1917@1,COG1917@2	NA|NA|NA	S	Cupin domain
PAKBJLMI_01239	272621.LBA1611	0.0	3123.6	Lactobacillaceae	sprD			ko:K21449					ko00000,ko02000	1.B.40.2			Bacteria	1V0HE@1239,3F508@33958,4HATS@91061,COG1196@1,COG1196@2,COG1511@1,COG1511@2	NA|NA|NA	D	Domain of Unknown Function (DUF1542)
PAKBJLMI_01240	257314.LJ_0238	2.8e-17	94.0	Lactobacillaceae													Bacteria	1U689@1239,3F7AB@33958,4IFZ0@91061,COG1309@1,COG1309@2	NA|NA|NA	K	transcriptional regulator
PAKBJLMI_01241	272621.LBA1614	5.5e-71	273.5	Lactobacillaceae													Bacteria	1U689@1239,3F7AB@33958,4IFZ0@91061,COG1309@1,COG1309@2	NA|NA|NA	K	transcriptional regulator
PAKBJLMI_01242	97137.C821_01702	4.8e-16	90.9	Lactobacillaceae													Bacteria	1TUUV@1239,29GPR@1,303MK@2,3FAT0@33958,4II9J@91061	NA|NA|NA		
PAKBJLMI_01243	272621.LBA1616	2.2e-296	1024.2	Lactobacillaceae	ytgP	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944		ko:K03328,ko:K06409					ko00000,ko02000	2.A.66.2,2.A.66.2.14			Bacteria	1TNYX@1239,3F404@33958,4H9RY@91061,COG2244@1,COG2244@2	NA|NA|NA	S	Polysaccharide biosynthesis protein
PAKBJLMI_01244	272621.LBA1617	0.0	1682.5	Lactobacillaceae	leuS	GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0030312,GO:0034641,GO:0034645,GO:0034660,GO:0040007,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576	6.1.1.4	ko:K01869	ko00970,map00970	M00359,M00360	R03657	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029				Bacteria	1TP0Y@1239,3F46M@33958,4HAG1@91061,COG0495@1,COG0495@2	NA|NA|NA	J	Belongs to the class-I aminoacyl-tRNA synthetase family
PAKBJLMI_01245	272621.LBA1618	3.9e-119	434.1	Lactobacillaceae			3.6.1.27	ko:K19302	ko00550,map00550		R05627	RC00002	ko00000,ko00001,ko01000,ko01011				Bacteria	1VF2U@1239,3F5CM@33958,4HNXR@91061,COG0671@1,COG0671@2	NA|NA|NA	I	Acid phosphatase homologues
PAKBJLMI_01246	272621.LBA1619	4.4e-91	340.5	Lactobacillaceae	ndh	GO:0003674,GO:0003824,GO:0003955,GO:0006091,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016491,GO:0016651,GO:0016655,GO:0019646,GO:0022900,GO:0022904,GO:0044237,GO:0045333,GO:0055114	1.6.99.3	ko:K03885	ko00190,map00190				ko00000,ko00001,ko01000				Bacteria	1TR6X@1239,3F4N1@33958,4HA14@91061,COG1252@1,COG1252@2	NA|NA|NA	C	NADH dehydrogenase
PAKBJLMI_01247	272621.LBA1620	2.3e-116	424.9	Lactobacillaceae	ndh	GO:0003674,GO:0003824,GO:0003955,GO:0006091,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016491,GO:0016651,GO:0016655,GO:0019646,GO:0022900,GO:0022904,GO:0044237,GO:0045333,GO:0055114	1.6.99.3	ko:K03885	ko00190,map00190				ko00000,ko00001,ko01000				Bacteria	1TR6X@1239,3F4N1@33958,4HA14@91061,COG1252@1,COG1252@2	NA|NA|NA	C	NADH dehydrogenase
PAKBJLMI_01248	1423767.BALU01000011_gene210	1.5e-30	139.0	Lactobacillaceae	cydA	GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009060,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016491,GO:0016679,GO:0016682,GO:0019646,GO:0020037,GO:0022900,GO:0022904,GO:0031224,GO:0031226,GO:0032991,GO:0044237,GO:0044425,GO:0044459,GO:0044464,GO:0045333,GO:0046906,GO:0048037,GO:0055114,GO:0070069,GO:0071944,GO:0097159,GO:1901363	1.10.3.14	ko:K00425	ko00190,ko01100,ko02020,map00190,map01100,map02020	M00153	R11325	RC00061	ko00000,ko00001,ko00002,ko01000	3.D.4.3		iPC815.YPO1117,iSBO_1134.SBO_2253,iSFxv_1172.SFxv_0621,iS_1188.S0577,iSbBS512_1146.SbBS512_E2337	Bacteria	1TRH4@1239,3F4MJ@33958,4HA19@91061,COG1271@1,COG1271@2	NA|NA|NA	C	ubiquinol oxidase
PAKBJLMI_01249	272621.LBA1621	2.9e-260	904.0	Lactobacillaceae	qacA												Bacteria	1VSW8@1239,3F4AW@33958,4HUQC@91061,COG0477@1,COG2814@2	NA|NA|NA	EGP	Major facilitator Superfamily
PAKBJLMI_01250	272621.LBA1622	2.4e-220	771.2	Lactobacillaceae	metK	GO:0003674,GO:0003824,GO:0004478,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016740,GO:0016765,GO:0044424,GO:0044444,GO:0044464	2.5.1.6	ko:K00789	ko00270,ko01100,ko01110,ko01230,map00270,map01100,map01110,map01230	M00034,M00035,M00368,M00609	R00177,R04771	RC00021,RC01211	ko00000,ko00001,ko00002,ko01000				Bacteria	1TPCV@1239,3F3T0@33958,4HB33@91061,COG0192@1,COG0192@2	NA|NA|NA	H	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
PAKBJLMI_01255	272621.LBA1626	1.8e-253	881.3	Lactobacillaceae	serS	GO:0000287,GO:0003674,GO:0003824,GO:0004812,GO:0004828,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006434,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009059,GO:0009069,GO:0009070,GO:0009987,GO:0010467,GO:0016053,GO:0016070,GO:0016259,GO:0016260,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0042802,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046872,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	6.1.1.11	ko:K01875	ko00970,map00970	M00359,M00360	R03662,R08218	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016			iAF987.Gmet_3528,iSDY_1059.SDY_2368	Bacteria	1TP4W@1239,3F3M6@33958,4H9Y4@91061,COG0172@1,COG0172@2	NA|NA|NA	J	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
PAKBJLMI_01256	272621.LBA1627	1.4e-101	375.6	Lactobacillaceae													Bacteria	1V49W@1239,3F5A6@33958,4HHAP@91061,COG1670@1,COG1670@2	NA|NA|NA	J	Acetyltransferase (GNAT) domain
PAKBJLMI_01257	272621.LBA1628	2.7e-111	407.9	Lactobacillaceae	yjbF												Bacteria	1V7NH@1239,3F3SV@33958,4HIU5@91061,COG0398@1,COG0398@2	NA|NA|NA	S	SNARE associated Golgi protein
PAKBJLMI_01258	272621.LBA1629	3.2e-152	544.3	Lactobacillaceae													Bacteria	1VEC5@1239,3F50A@33958,4HKY6@91061,COG0657@1,COG0657@2	NA|NA|NA	I	alpha/beta hydrolase fold
PAKBJLMI_01259	272621.LBA1630	4.5e-160	570.5	Lactobacillaceae	hipB	GO:0000976,GO:0000984,GO:0000985,GO:0001017,GO:0001046,GO:0001047,GO:0001067,GO:0001130,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0006139,GO:0006351,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032774,GO:0032991,GO:0032993,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043565,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0045892,GO:0045934,GO:0046483,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2001141		ko:K15773					ko00000,ko02048,ko03000				Bacteria	1VBK2@1239,3FBE7@33958,4HCZ9@91061,COG1396@1,COG1396@2	NA|NA|NA	K	Helix-turn-helix
PAKBJLMI_01260	272621.LBA1631	2.1e-93	348.2	Lactobacillaceae													Bacteria	1V8XI@1239,3FBAU@33958,4HJ7M@91061,COG3613@1,COG3613@2	NA|NA|NA	F	Nucleoside 2-deoxyribosyltransferase
PAKBJLMI_01261	272621.LBA1632	2.1e-263	914.4	Lactobacillaceae	gabD		1.2.1.16,1.2.1.20,1.2.1.79	ko:K00135	ko00250,ko00310,ko00350,ko00650,ko00760,ko01100,ko01120,map00250,map00310,map00350,map00650,map00760,map01100,map01120	M00027	R00713,R00714,R02401	RC00080	ko00000,ko00001,ko00002,ko01000				Bacteria	1TP4S@1239,3F47F@33958,4H9MF@91061,COG1012@1,COG1012@2	NA|NA|NA	C	Belongs to the aldehyde dehydrogenase family
PAKBJLMI_01262	272621.LBA1633	0.0	2820.4	Lactobacillaceae	fhaB	GO:0005575,GO:0005623,GO:0009986,GO:0044464		ko:K15125,ko:K18491	ko04550,ko05133,map04550,map05133				ko00000,ko00001,ko00536,ko03000				Bacteria	1U7JU@1239,3F9U9@33958,4IHGY@91061,COG3064@1,COG3064@2	NA|NA|NA	M	Rib/alpha-like repeat
PAKBJLMI_01263	272621.LBA1634	0.0	3340.4	Lactobacillaceae	fhaB	GO:0005575,GO:0005623,GO:0009986,GO:0044464		ko:K15125,ko:K18491	ko04550,ko05133,map04550,map05133				ko00000,ko00001,ko00536,ko03000				Bacteria	1UHXY@1239,3F52E@33958,4ISAC@91061,COG2373@1,COG2373@2,COG3064@1,COG3064@2	NA|NA|NA	M	Rib/alpha-like repeat
PAKBJLMI_01264	272621.LBA1636	2.4e-163	581.6	Lactobacillaceae													Bacteria	1U58Z@1239,29NMZ@1,309JX@2,3F573@33958,4IF0A@91061	NA|NA|NA		
PAKBJLMI_01265	272621.LBA1637	0.0	1205.3	Lactobacillaceae	ydgH	GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006790,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009605,GO:0009607,GO:0009987,GO:0030312,GO:0043207,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044272,GO:0044281,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0046505,GO:0046506,GO:0050896,GO:0051701,GO:0051704,GO:0051707,GO:0052173,GO:0052200,GO:0052564,GO:0052572,GO:0071704,GO:0071944,GO:0075136,GO:1901576		ko:K06994,ko:K07003					ko00000				Bacteria	1TQ7C@1239,3FCCY@33958,4HBM6@91061,COG1511@1,COG1511@2,COG2409@1,COG2409@2	NA|NA|NA	S	MMPL family
PAKBJLMI_01266	272621.LBA1638	2.3e-96	358.2	Lactobacillaceae	yobS	GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0043565,GO:0044212,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1903506,GO:1990837,GO:2000112,GO:2001141											Bacteria	1V1DM@1239,3F5CS@33958,4HG0Y@91061,COG1309@1,COG1309@2	NA|NA|NA	K	Bacterial regulatory proteins, tetR family
PAKBJLMI_01267	272621.LBA1639	1.5e-148	532.3	Lactobacillaceae			3.5.2.6	ko:K17836	ko00311,ko01130,ko01501,map00311,map01130,map01501	M00627,M00628	R06363	RC01499	ko00000,ko00001,ko00002,ko01000,ko01504				Bacteria	1U564@1239,3F4WE@33958,4IEXG@91061,COG2367@1,COG2367@2	NA|NA|NA	V	Beta-lactamase enzyme family
PAKBJLMI_01268	272621.LBA1640	4e-154	550.8	Lactobacillaceae	corA			ko:K03284					ko00000,ko02000	1.A.35.1,1.A.35.3			Bacteria	1TPSV@1239,3FCA3@33958,4HAPC@91061,COG0598@1,COG0598@2	NA|NA|NA	P	CorA-like Mg2+ transporter protein
PAKBJLMI_01269	272621.LBA1641	1.3e-235	822.0	Lactobacillaceae				ko:K02027,ko:K05813	ko02010,map02010	M00198,M00207			ko00000,ko00001,ko00002,ko02000	3.A.1.1,3.A.1.1.3			Bacteria	1TS64@1239,3F4P5@33958,4HEKH@91061,COG1653@1,COG1653@2	NA|NA|NA	G	Bacterial extracellular solute-binding protein
PAKBJLMI_01270	272621.LBA1642	3.2e-258	897.1	Lactobacillaceae	YSH1			ko:K12574	ko03018,map03018				ko00000,ko00001,ko01000,ko03019				Bacteria	1UDEF@1239,3F4WJ@33958,4HIN2@91061,COG0595@1,COG0595@2	NA|NA|NA	S	Zn-dependent metallo-hydrolase RNA specificity domain
PAKBJLMI_01271	272621.LBA1643	9.4e-147	526.2	Lactobacillaceae	gtsC			ko:K02026		M00207			ko00000,ko00002,ko02000	3.A.1.1			Bacteria	1TRCP@1239,3FC8G@33958,4HBK1@91061,COG0395@1,COG0395@2	NA|NA|NA	P	Binding-protein-dependent transport system inner membrane component
PAKBJLMI_01272	748671.LCRIS_01671	2.2e-154	551.6	Lactobacillaceae	gtsB			ko:K02025,ko:K10118,ko:K10121,ko:K15771	ko02010,map02010	M00196,M00197,M00207,M00491			ko00000,ko00001,ko00002,ko02000	3.A.1.1,3.A.1.1.16,3.A.1.1.2,3.A.1.1.20,3.A.1.1.28			Bacteria	1TREE@1239,3F464@33958,4HCD0@91061,COG1175@1,COG1175@2	NA|NA|NA	P	ABC-type sugar transport systems, permease components
PAKBJLMI_01273	272621.LBA1645	7.1e-203	713.0	Lactobacillaceae	malK			ko:K10112,ko:K17240	ko02010,map02010	M00194,M00196,M00197,M00200,M00201,M00206,M00207,M00491,M00599,M00602,M00605,M00606			ko00000,ko00001,ko00002,ko02000	3.A.1.1,3.A.1.1.38		iLJ478.TM0421	Bacteria	1TP2M@1239,3FC3J@33958,4HBKK@91061,COG3842@1,COG3842@2	NA|NA|NA	P	ATPases associated with a variety of cellular activities
PAKBJLMI_01274	272621.LBA1646	2.8e-284	983.8	Lactobacillaceae	pipD			ko:K08659					ko00000,ko01000,ko01002				Bacteria	1TQ0F@1239,3F3M4@33958,4HC3G@91061,COG4690@1,COG4690@2	NA|NA|NA	E	Dipeptidase
PAKBJLMI_01275	272621.LBA1647	1.6e-157	562.0	Lactobacillaceae	endA			ko:K15051					ko00000				Bacteria	1V4X2@1239,3F3Y8@33958,4HIF5@91061,COG2169@1,COG2169@2	NA|NA|NA	F	DNA RNA non-specific endonuclease
PAKBJLMI_01276	272621.LBA1648	1.9e-183	648.3	Lactobacillaceae	dnaQ		2.7.7.7	ko:K02342,ko:K03763	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400				Bacteria	1TRS5@1239,3F546@33958,4HFJA@91061,COG2176@1,COG2176@2	NA|NA|NA	L	EXOIII
PAKBJLMI_01277	272621.LBA1649	1.4e-155	555.4	Lactobacillaceae				ko:K12410					ko00000,ko01000				Bacteria	1V192@1239,3F52D@33958,4IQTP@91061,COG0846@1,COG0846@2	NA|NA|NA	K	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
PAKBJLMI_01278	272621.LBA1650	1.5e-115	422.2	Lactobacillaceae	yviA												Bacteria	1TPNF@1239,3F4F3@33958,4HF15@91061,COG2323@1,COG2323@2	NA|NA|NA	S	Protein of unknown function (DUF421)
PAKBJLMI_01279	272621.LBA1651	3.4e-74	284.3	Lactobacillaceae													Bacteria	1VG8C@1239,2C9NT@1,32ZGB@2,3F749@33958,4HN0V@91061	NA|NA|NA	S	Protein of unknown function (DUF3290)
PAKBJLMI_01280	272621.LBA1652	0.0	1984.5	Lactobacillaceae	sdrF			ko:K14192,ko:K14194,ko:K14201,ko:K20276	ko02024,ko05150,map02024,map05150				ko00000,ko00001				Bacteria	1VNG5@1239,3F5Y1@33958,4HRQD@91061,COG4932@1,COG4932@2	NA|NA|NA	M	domain protein
PAKBJLMI_01281	272621.LBA1653	4.5e-140	503.8	Lactobacillaceae	pnuC			ko:K03811					ko00000,ko02000	4.B.1.1			Bacteria	1VE5T@1239,3F3MB@33958,4HMNW@91061,COG3201@1,COG3201@2	NA|NA|NA	H	nicotinamide mononucleotide transporter
PAKBJLMI_01282	272621.LBA1654	6.2e-264	916.8	Lactobacillaceae													Bacteria	1VNWP@1239,2DBU6@1,2ZB4C@2,3F51G@33958,4HRN6@91061	NA|NA|NA		
PAKBJLMI_01283	272621.LBA1655	3.5e-48	197.2	Lactobacillaceae													Bacteria	1U6ZQ@1239,2BFTH@1,329NF@2,3F8S9@33958,4IGU1@91061	NA|NA|NA		
PAKBJLMI_01284	272621.LBA1656	1.5e-143	515.4	Lactobacillaceae													Bacteria	1UI8X@1239,3FBSZ@33958,4ISGE@91061,COG2461@1,COG2461@2	NA|NA|NA	S	PAS domain
PAKBJLMI_01285	272621.LBA1657	5.6e-89	333.6	Lactobacillaceae				ko:K06147					ko00000,ko02000	3.A.1.106,3.A.1.109,3.A.1.21			Bacteria	1TSRV@1239,3F3JJ@33958,4HIAU@91061,COG1132@1,COG1132@2	NA|NA|NA	V	ABC transporter transmembrane region
PAKBJLMI_01286	272621.LBA1657	3.9e-196	690.6	Lactobacillaceae				ko:K06147					ko00000,ko02000	3.A.1.106,3.A.1.109,3.A.1.21			Bacteria	1TSRV@1239,3F3JJ@33958,4HIAU@91061,COG1132@1,COG1132@2	NA|NA|NA	V	ABC transporter transmembrane region
PAKBJLMI_01287	272621.LBA1658	1.4e-180	638.6	Lactobacillaceae	pip		3.4.11.5	ko:K01259	ko00330,map00330		R00135		ko00000,ko00001,ko01000,ko01002				Bacteria	1UEDT@1239,3F47H@33958,4HF61@91061,COG2267@1,COG2267@2	NA|NA|NA	E	Releases the N-terminal proline from various substrates
PAKBJLMI_01288	272621.LBA1659	1.8e-127	461.8	Lactobacillaceae													Bacteria	1TQY9@1239,3FC94@33958,4HUBD@91061,COG0745@1,COG0745@2	NA|NA|NA	T	Transcriptional regulatory protein, C terminal
PAKBJLMI_01289	272621.LBA1660	1.1e-243	849.0	Lactobacillaceae													Bacteria	1V5MM@1239,3FBU1@33958,4ISZN@91061,COG5002@1,COG5002@2	NA|NA|NA	T	GHKL domain
PAKBJLMI_01290	272621.LBA1661	2.1e-86	325.1	Lactobacillaceae													Bacteria	1VEU1@1239,3F6RU@33958,4HPJK@91061,COG3212@1,COG3212@2	NA|NA|NA	S	Peptidase propeptide and YPEB domain
PAKBJLMI_01291	272621.LBA1662	2.3e-97	361.7	Lactobacillaceae													Bacteria	1VD0Q@1239,3FBE6@33958,4IPQG@91061,COG3212@1,COG3212@2	NA|NA|NA	S	Peptidase propeptide and YPEB domain
PAKBJLMI_01292	272621.LBA1663	2.8e-76	291.2	Lactobacillaceae	yybA		2.3.1.57	ko:K22441					ko00000,ko01000				Bacteria	1V3PS@1239,3F6VT@33958,4HFN6@91061,COG1846@1,COG1846@2	NA|NA|NA	K	Transcriptional regulator
PAKBJLMI_01293	272621.LBA1664	6.8e-95	353.2	Lactobacillaceae	paiA		2.3.1.57	ko:K22441					ko00000,ko01000				Bacteria	1VDFK@1239,3FB81@33958,4HMHW@91061,COG0454@1,COG0456@2	NA|NA|NA	K	Acetyltransferase (GNAT) domain
PAKBJLMI_01294	272621.LBA1665	0.0	1102.0	Lactobacillaceae				ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	M00239,M00439			ko00000,ko00001,ko00002,ko02000	3.A.1.5,3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25			Bacteria	1TNYQ@1239,3F3JE@33958,4HAMK@91061,COG4166@1,COG4166@2	NA|NA|NA	E	ABC transporter, substratebinding protein
PAKBJLMI_01295	272621.LBA1666	1.1e-54	219.2	Lactobacillaceae	ypaA			ko:K08987					ko00000				Bacteria	1VAVU@1239,3F7NA@33958,4HQHN@91061,COG3759@1,COG3759@2	NA|NA|NA	S	Protein of unknown function (DUF1304)
PAKBJLMI_01296	272621.LBA1667	4.6e-100	370.5	Lactobacillaceae													Bacteria	1U5TJ@1239,3F6H2@33958,4IFHH@91061,COG3212@1,COG3212@2	NA|NA|NA	S	Peptidase propeptide and YPEB domain
PAKBJLMI_01297	272621.LBA1668	9.9e-103	379.4	Lactobacillaceae	efp	GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576		ko:K02356					ko00000,ko03012				Bacteria	1TR8P@1239,3F4EW@33958,4H9YX@91061,COG0231@1,COG0231@2	NA|NA|NA	J	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PAKBJLMI_01298	272621.LBA1669	3.5e-171	607.4	Lactobacillaceae	coaA	GO:0003674,GO:0003824,GO:0004594,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	2.7.1.33	ko:K00867	ko00770,ko01100,map00770,map01100	M00120	R02971,R03018,R04391	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000			iECDH1ME8569_1439.ECDH1ME8569_3838,iECH74115_1262.ECH74115_5439,iECSE_1348.ECSE_4265,iECSF_1327.ECSF_3833,iECSP_1301.ECSP_5045,iECW_1372.ECW_m4332,iEcDH1_1363.EcDH1_4016,iEcolC_1368.EcolC_4046,iPC815.YPO3758,iSFV_1184.SFV_4047,iSFxv_1172.SFxv_4418,iWFL_1372.ECW_m4332,iZ_1308.Z5545	Bacteria	1TPHJ@1239,3F42Q@33958,4HA4K@91061,COG1072@1,COG1072@2	NA|NA|NA	F	Pantothenic acid kinase
PAKBJLMI_01299	272621.LBA1670	6.7e-104	383.3	Lactobacillaceae													Bacteria	1VB88@1239,3F5AR@33958,4IPQF@91061,COG2755@1,COG2755@2	NA|NA|NA	E	GDSL-like Lipase/Acylhydrolase
PAKBJLMI_01300	272621.LBA1671	9.9e-82	309.3	Lactobacillaceae	yjcF			ko:K02348					ko00000				Bacteria	1VA2J@1239,3F6HQ@33958,4HKF5@91061,COG2153@1,COG2153@2	NA|NA|NA	S	Acetyltransferase (GNAT) domain
PAKBJLMI_01301	272621.LBA1672	2.8e-151	541.2	Lactobacillaceae	aatB			ko:K02029,ko:K02030		M00236			ko00000,ko00002,ko02000	3.A.1.3			Bacteria	1TQNR@1239,3F3WC@33958,4HF14@91061,COG0834@1,COG0834@2	NA|NA|NA	ET	ABC transporter substrate-binding protein
PAKBJLMI_01302	272621.LBA1673	9e-110	402.9	Lactobacillaceae	glnQ		3.6.3.21	ko:K02028		M00236			ko00000,ko00002,ko01000,ko02000	3.A.1.3			Bacteria	1UYAZ@1239,3F4GP@33958,4HE6M@91061,COG1126@1,COG1126@2	NA|NA|NA	E	ABC transporter
PAKBJLMI_01303	272621.LBA1674	3e-108	397.9	Lactobacillaceae	glnP			ko:K02029,ko:K02030,ko:K17073,ko:K17074	ko02010,map02010	M00236,M00589			ko00000,ko00001,ko00002,ko02000	3.A.1.3,3.A.1.3.20			Bacteria	1V280@1239,3F3VF@33958,4HGMH@91061,COG0765@1,COG0765@2	NA|NA|NA	P	ABC transporter permease
PAKBJLMI_01304	1423767.BALU01000007_gene654	0.0	1359.7	Lactobacillaceae	helD		3.6.4.12	ko:K03657	ko03420,ko03430,map03420,map03430				ko00000,ko00001,ko01000,ko03400				Bacteria	1TP39@1239,3F486@33958,4H9Y5@91061,COG3973@1,COG3973@2	NA|NA|NA	L	DNA helicase
PAKBJLMI_01305	272621.LBA1677	9.9e-126	456.1	Lactobacillaceae	XK27_08875												Bacteria	1VW9X@1239,3F60X@33958,4HWF8@91061,COG5549@1,COG5549@2	NA|NA|NA	O	PFAM peptidase M10A and M12B, matrixin and adamalysin
PAKBJLMI_01306	272621.LBA1678	8.5e-127	459.5	Lactobacillaceae	pgm3		5.4.2.11	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	M00001,M00002,M00003	R01518	RC00536	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147				Bacteria	1TQWQ@1239,3F524@33958,4HF2N@91061,COG0406@1,COG0406@2	NA|NA|NA	G	Phosphoglycerate mutase family
PAKBJLMI_01307	272621.LBA1679	0.0	1110.1	Lactobacillaceae				ko:K02004		M00258			ko00000,ko00002,ko02000	3.A.1			Bacteria	1TR2D@1239,3F45H@33958,4HAZG@91061,COG0577@1,COG0577@2	NA|NA|NA	V	FtsX-like permease family
PAKBJLMI_01308	272621.LBA1680	1.7e-134	485.3	Lactobacillaceae	cysA			ko:K02003		M00258			ko00000,ko00002,ko02000	3.A.1			Bacteria	1TNZG@1239,3F3MG@33958,4H9UT@91061,COG1136@1,COG1136@2	NA|NA|NA	V	ABC transporter, ATP-binding protein
PAKBJLMI_01309	272621.LBA1681	1.6e-241	841.6	Lactobacillaceae													Bacteria	1V6D3@1239,3F4ZG@33958,4IPQE@91061,COG4640@1,COG4640@2	NA|NA|NA	S	response to antibiotic
PAKBJLMI_01310	272621.LBA1682	8.4e-20	102.1	Lactobacillaceae													Bacteria	1U591@1239,29NN1@1,309JZ@2,3F57G@33958,4IF0C@91061	NA|NA|NA		
PAKBJLMI_01311	272621.LBA1682	1.3e-38	165.2	Lactobacillaceae													Bacteria	1U591@1239,29NN1@1,309JZ@2,3F57G@33958,4IF0C@91061	NA|NA|NA		
PAKBJLMI_01312	272621.LBA1683	0.0	1661.0	Lactobacillaceae			3.6.3.8	ko:K01537					ko00000,ko01000	3.A.3.2			Bacteria	1TPF5@1239,3F3KP@33958,4H9S5@91061,COG0474@1,COG0474@2	NA|NA|NA	P	P-type ATPase
PAKBJLMI_01313	272621.LBA1684	2.1e-64	251.5	Lactobacillaceae			2.7.1.191	ko:K02793,ko:K02794	ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060	M00276	R02630	RC00017,RC03206	ko00000,ko00001,ko00002,ko01000,ko02000	4.A.6.1			Bacteria	1VI0C@1239,3F6IK@33958,4I1S0@91061,COG2893@1,COG2893@2	NA|NA|NA	G	PTS system fructose IIA component
PAKBJLMI_01314	272621.LBA1685	2.1e-48	198.0	Lactobacillaceae													Bacteria	1U6DS@1239,29PBU@1,30AA1@2,3F7P4@33958,4IG5H@91061	NA|NA|NA		
PAKBJLMI_01315	272621.LBA1686	1.9e-15	87.4	Lactobacillaceae													Bacteria	1U70J@1239,29PT6@1,30ARD@2,3F8TF@33958,4IGUW@91061	NA|NA|NA		
PAKBJLMI_01316	272621.LBA1687	4.2e-186	657.1	Lactobacillaceae	ansA		3.5.1.1	ko:K01424	ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110		R00485	RC00010,RC02798	ko00000,ko00001,ko01000				Bacteria	1TPP9@1239,3FCC6@33958,4HD98@91061,COG0252@1,COG0252@2	NA|NA|NA	EJ	L-asparaginase, type I
PAKBJLMI_01317	272621.LBA1688	1.5e-138	498.8	Lactobacillaceae	glvR			ko:K03481					ko00000,ko03000				Bacteria	1TR3Z@1239,3FBJI@33958,4IQVZ@91061,COG1737@1,COG1737@2	NA|NA|NA	K	Helix-turn-helix domain, rpiR family
PAKBJLMI_01318	272621.LBA1689	4.1e-269	933.3	Lactobacillaceae	aglB		3.2.1.122,3.2.1.86	ko:K01222,ko:K01232	ko00010,ko00500,map00010,map00500		R00837,R00838,R00839,R05133,R05134,R06113	RC00049,RC00171,RC00714	ko00000,ko00001,ko01000		GH4,GT4		Bacteria	1TQ9I@1239,3F4W5@33958,4H9TM@91061,COG1486@1,COG1486@2	NA|NA|NA	G	Family 4 glycosyl hydrolase C-terminal domain
PAKBJLMI_01319	272621.LBA1690	4.3e-155	553.9	Lactobacillaceae													Bacteria	1U54Y@1239,2DKHZ@1,309I2@2,3F4PH@33958,4IEW4@91061	NA|NA|NA		
PAKBJLMI_01320	272621.LBA1691	3.4e-91	340.9	Lactobacillaceae													Bacteria	1U63K@1239,2A3Q0@1,30S7H@2,3F6YD@33958,4IFT0@91061	NA|NA|NA		
PAKBJLMI_01321	272621.LBA1692	4.2e-106	390.6	Lactobacillaceae			3.2.2.20	ko:K01246,ko:K06977	ko03410,map03410				ko00000,ko00001,ko01000,ko03400				Bacteria	1V7GR@1239,3F44B@33958,4HJ11@91061,COG0454@1,COG0456@2	NA|NA|NA	K	acetyltransferase
PAKBJLMI_01324	272621.LBA1695	4.4e-311	1072.8	Bacilli	asdA		4.1.1.12	ko:K09758	ko00250,ko00270,ko01100,ko01230,map00250,map00270,map01100,map01230		R00397,R00863	RC00282,RC00399,RC00400	ko00000,ko00001,ko01000				Bacteria	1TQP8@1239,4HECY@91061,COG0436@1,COG0436@2	NA|NA|NA	E	Aminotransferase
PAKBJLMI_01325	272621.LBA1696	3.2e-303	1047.0	Lactobacillaceae	aspT			ko:K07085					ko00000	2.A.81			Bacteria	1UGE4@1239,3F5RV@33958,4HTZ2@91061,COG0490@1,COG0490@2,COG2985@1,COG2985@2	NA|NA|NA	P	Predicted Permease Membrane Region
PAKBJLMI_01326	272621.LBA1697	4.2e-189	667.2	Lactobacillaceae													Bacteria	1VZSI@1239,29W71@1,30HS8@2,3F4M9@33958,4IEVP@91061	NA|NA|NA	S	Domain of unknown function (DUF4767)
PAKBJLMI_01327	272621.LBA1698	2.5e-184	651.4	Lactobacillaceae													Bacteria	1UI8W@1239,3F6SG@33958,4ISGD@91061,COG3152@1,COG3152@2	NA|NA|NA	S	Membrane
PAKBJLMI_01328	272621.LBA1699	6.4e-150	536.6	Lactobacillaceae	xth	GO:0003674,GO:0003824,GO:0003906,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008296,GO:0008309,GO:0008311,GO:0008408,GO:0009987,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360	3.1.11.2	ko:K01142	ko03410,map03410				ko00000,ko00001,ko01000,ko03400				Bacteria	1TPFB@1239,3F4GK@33958,4HAIU@91061,COG0708@1,COG0708@2	NA|NA|NA	L	exodeoxyribonuclease III
PAKBJLMI_01329	272621.LBA1700	7.9e-188	662.9	Lactobacillaceae													Bacteria	1V1RQ@1239,3F474@33958,4HJZQ@91061,COG0662@1,COG0662@2,COG2207@1,COG2207@2	NA|NA|NA	K	helix_turn_helix, arabinose operon control protein
PAKBJLMI_01330	272621.LBA1701	7.8e-188	662.9	Lactobacillaceae													Bacteria	1V1RQ@1239,3F474@33958,4HJZQ@91061,COG0662@1,COG0662@2,COG2207@1,COG2207@2	NA|NA|NA	K	helix_turn_helix, arabinose operon control protein
PAKBJLMI_01331	272621.LBA1702	4.7e-149	533.9	Lactobacillaceae				ko:K03481					ko00000,ko03000				Bacteria	1TPIX@1239,3F5WQ@33958,4HBJA@91061,COG1737@1,COG1737@2	NA|NA|NA	K	Helix-turn-helix domain, rpiR family
PAKBJLMI_01332	272621.LBA1703	9.6e-106	389.4	Lactobacillaceae	yleB		4.2.1.126	ko:K07106,ko:K09963	ko00520,ko01100,map00520,map01100		R08555	RC00397,RC00746	ko00000,ko00001,ko01000				Bacteria	1TRIY@1239,3FB4D@33958,4HAHJ@91061,COG3589@1,COG3589@2	NA|NA|NA	S	Bacterial protein of unknown function (DUF871)
PAKBJLMI_01333	272621.LBA1703	5.3e-84	317.0	Lactobacillaceae	yleB		4.2.1.126	ko:K07106,ko:K09963	ko00520,ko01100,map00520,map01100		R08555	RC00397,RC00746	ko00000,ko00001,ko01000				Bacteria	1TRIY@1239,3FB4D@33958,4HAHJ@91061,COG3589@1,COG3589@2	NA|NA|NA	S	Bacterial protein of unknown function (DUF871)
PAKBJLMI_01334	272621.LBA1704	3.7e-157	560.8	Lactobacillaceae	murQ		4.2.1.126	ko:K07106	ko00520,ko01100,map00520,map01100		R08555	RC00397,RC00746	ko00000,ko00001,ko01000				Bacteria	1TPSF@1239,3F4T1@33958,4HBWP@91061,COG2103@1,COG2103@2	NA|NA|NA	G	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
PAKBJLMI_01335	272621.LBA1705	0.0	1268.4	Lactobacillaceae	sacX	GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008150,GO:0008643,GO:0009401,GO:0015144,GO:0016020,GO:0016740,GO:0016772,GO:0016773,GO:0022804,GO:0022857,GO:0034219,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:0090563,GO:0090588	2.7.1.208,2.7.1.211	ko:K02749,ko:K02750,ko:K02755,ko:K02756,ko:K02757,ko:K02808,ko:K02809,ko:K02810	ko00500,ko02060,map00500,map02060	M00268,M00269,M00271	R00811,R04111	RC00017,RC03206	ko00000,ko00001,ko00002,ko01000,ko02000	4.A.1.1.10,4.A.1.1.16,4.A.1.1.4,4.A.1.1.8,4.A.1.2.1,4.A.1.2.10,4.A.1.2.11,4.A.1.2.12,4.A.1.2.2,4.A.1.2.5,4.A.1.2.6,4.A.1.2.9			Bacteria	1TP5X@1239,3F458@33958,4HA0I@91061,COG1263@1,COG1263@2,COG1264@1,COG1264@2,COG2190@1,COG2190@2	NA|NA|NA	G	phosphotransferase system
PAKBJLMI_01336	272621.LBA1706	1.6e-298	1031.2	Lactobacillaceae	arbB		3.2.1.86	ko:K01223	ko00010,ko00500,map00010,map00500		R00839,R05133,R05134	RC00049,RC00171,RC00714	ko00000,ko00001,ko01000		GT1		Bacteria	1TP19@1239,3F3PQ@33958,4HA1W@91061,COG2723@1,COG2723@2	NA|NA|NA	G	Belongs to the glycosyl hydrolase 1 family
PAKBJLMI_01337	272621.LBA1707	0.0	1187.2	Lactobacillaceae			2.7.1.208,2.7.1.211	ko:K02749,ko:K02750,ko:K02755,ko:K02756,ko:K02757,ko:K02808,ko:K02809,ko:K02810	ko00500,ko02060,map00500,map02060	M00268,M00269,M00271	R00811,R04111	RC00017,RC03206	ko00000,ko00001,ko00002,ko01000,ko02000	4.A.1.1.10,4.A.1.1.16,4.A.1.1.4,4.A.1.1.8,4.A.1.2.1,4.A.1.2.10,4.A.1.2.11,4.A.1.2.12,4.A.1.2.2,4.A.1.2.5,4.A.1.2.6,4.A.1.2.9			Bacteria	1TP5X@1239,3F458@33958,4HA0I@91061,COG1263@1,COG1263@2,COG1264@1,COG1264@2,COG2190@1,COG2190@2	NA|NA|NA	G	phosphotransferase system
PAKBJLMI_01338	272621.LBA1708	2.5e-158	564.7	Lactobacillaceae				ko:K02538,ko:K03488					ko00000,ko03000				Bacteria	1TT5A@1239,3F4SJ@33958,4HC5Y@91061,COG3711@1,COG3711@2	NA|NA|NA	K	CAT RNA binding domain
PAKBJLMI_01339	272621.LBA1709	0.0	2138.6	Lactobacillaceae				ko:K03646,ko:K03832					ko00000,ko02000	2.C.1.1,2.C.1.2			Bacteria	1UJ7E@1239,3FBUC@33958,4IT3I@91061,COG0810@1,COG0810@2	NA|NA|NA	M	Leucine-rich repeat (LRR) protein
PAKBJLMI_01340	272621.LBA1710	0.0	2351.2	Lactobacillaceae	pulA		3.2.1.41	ko:K01200	ko00500,ko01100,ko01110,map00500,map01100,map01110		R02111		ko00000,ko00001,ko01000		CBM48,GH13		Bacteria	1TP3M@1239,3F4C2@33958,4HBP5@91061,COG1523@1,COG1523@2	NA|NA|NA	G	belongs to the glycosyl hydrolase 13 family
PAKBJLMI_01341	272621.LBA1711	1.2e-91	342.4	Lactobacillaceae													Bacteria	1U68F@1239,29P7M@1,30A5Q@2,3F7AR@33958,4IFZ6@91061	NA|NA|NA		
PAKBJLMI_01342	272621.LBA1712	1.6e-182	645.2	Lactobacillaceae													Bacteria	1U87F@1239,2E623@1,30IKD@2,3FAN3@33958,4II55@91061	NA|NA|NA		
PAKBJLMI_01343	272621.LBA1713	1.1e-119	436.4	Lactobacillaceae													Bacteria	1TSCB@1239,3F8BM@33958,4HFC3@91061,COG5293@1,COG5293@2	NA|NA|NA	S	Uncharacterised protein conserved in bacteria (DUF2326)
PAKBJLMI_01344	272621.LBA1713	1.4e-142	512.3	Lactobacillaceae													Bacteria	1TSCB@1239,3F8BM@33958,4HFC3@91061,COG5293@1,COG5293@2	NA|NA|NA	S	Uncharacterised protein conserved in bacteria (DUF2326)
PAKBJLMI_01345	1229756.C269_04025	7.6e-10	69.7	Bacteria													Bacteria	28YSN@1,2ZKK1@2	NA|NA|NA		
PAKBJLMI_01351	272621.LBA1719	2.2e-165	588.2	Lactobacillaceae	galU		2.7.7.9	ko:K00963	ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130	M00129,M00361,M00362,M00549	R00289	RC00002	ko00000,ko00001,ko00002,ko01000				Bacteria	1TQ24@1239,3F45A@33958,4HATY@91061,COG1210@1,COG1210@2	NA|NA|NA	M	UTP-glucose-1-phosphate uridylyltransferase
PAKBJLMI_01352	272621.LBA1720	4.1e-217	760.4	Lactobacillaceae	mnaA		5.1.3.14	ko:K01791	ko00520,ko01100,ko05111,map00520,map01100,map05111	M00362	R00420	RC00290	ko00000,ko00001,ko00002,ko01000,ko01005				Bacteria	1TQZT@1239,3F3KQ@33958,4HBI3@91061,COG0381@1,COG0381@2	NA|NA|NA	G	Belongs to the UDP-N-acetylglucosamine 2-epimerase family
PAKBJLMI_01353	272621.LBA1721	2.3e-63	248.1	Lactobacillaceae				ko:K07497					ko00000				Bacteria	1TQQY@1239,3F59Y@33958,4HBHG@91061,COG2801@1,COG2801@2	NA|NA|NA	L	PFAM Integrase catalytic region
PAKBJLMI_01354	272621.LBA1722	1e-136	492.7	Bacteria				ko:K07483					ko00000				Bacteria	COG2963@1,COG2963@2	NA|NA|NA	L	transposase activity
PAKBJLMI_01355	272621.LBA1723	5.2e-234	816.6	Lactobacillaceae													Bacteria	1TP4A@1239,3F40X@33958,4HDAB@91061,COG3547@1,COG3547@2	NA|NA|NA	L	COG3547 Transposase and inactivated derivatives
PAKBJLMI_01356	272621.LBA1724	4.6e-266	923.3	Lactobacillaceae	cps1C												Bacteria	1TP7R@1239,3F48Q@33958,4HC84@91061,COG2244@1,COG2244@2	NA|NA|NA	S	Membrane protein involved in the export of O-antigen and teichoic acid
PAKBJLMI_01357	97137.C821_00552	1.2e-200	705.7	Lactobacillaceae	glf	GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0008767,GO:0009273,GO:0009987,GO:0016020,GO:0016853,GO:0016866,GO:0030312,GO:0042546,GO:0044085,GO:0044464,GO:0071554,GO:0071766,GO:0071840,GO:0071944	5.4.99.9	ko:K01854	ko00052,ko00520,map00052,map00520		R00505,R09009	RC00317,RC02396	ko00000,ko00001,ko01000			iNJ661.Rv3809c	Bacteria	1TQB9@1239,3F52G@33958,4HB5F@91061,COG0562@1,COG0562@2	NA|NA|NA	M	UDP-galactopyranose mutase
PAKBJLMI_01358	272621.LBA1727	4.2e-218	763.8	Lactobacillaceae													Bacteria	1VES5@1239,2CCRF@1,334T0@2,3FAYM@33958,4HXFV@91061	NA|NA|NA	S	Psort location CytoplasmicMembrane, score 9.99
PAKBJLMI_01359	272621.LBA1728	1.2e-188	665.6	Lactobacillaceae													Bacteria	1TT6C@1239,3FBUD@33958,4H9Q4@91061,COG0463@1,COG0463@2	NA|NA|NA	M	Glycosyltransferase like family 2
PAKBJLMI_01360	272621.LBA1729	5.7e-118	431.0	Firmicutes													Bacteria	1VKBW@1239,COG0438@1,COG0438@2	NA|NA|NA	M	transferase activity, transferring glycosyl groups
PAKBJLMI_01361	272621.LBA1731	2.8e-165	587.8	Lactobacillaceae	glfT1		1.1.1.133	ko:K00067,ko:K07011	ko00521,ko00523,ko01130,map00521,map00523,map01130	M00793	R02777	RC00182	ko00000,ko00001,ko00002,ko01000				Bacteria	1V4NS@1239,3F6P7@33958,4HHDW@91061,COG1216@1,COG1216@2	NA|NA|NA	S	Glycosyltransferase like family 2
PAKBJLMI_01362	272621.LBA1732	1.6e-148	531.9	Lactobacillaceae	cps1D												Bacteria	1U6EG@1239,3F539@33958,4HG4F@91061,COG1442@1,COG1442@2	NA|NA|NA	M	Domain of unknown function (DUF4422)
PAKBJLMI_01363	272621.LBA1733	1.1e-123	449.1	Lactobacillaceae	rfbP												Bacteria	1TP7M@1239,3FB5K@33958,4HHDH@91061,COG2148@1,COG2148@2	NA|NA|NA	M	Bacterial sugar transferase
PAKBJLMI_01364	272621.LBA1734	1.8e-147	528.5	Lactobacillaceae	ywqE		3.1.3.48	ko:K01104					ko00000,ko01000				Bacteria	1TQ1T@1239,3F3RT@33958,4HDZR@91061,COG4464@1,COG4464@2	NA|NA|NA	GM	PHP domain protein
PAKBJLMI_01365	272621.LBA1735	9.6e-125	453.0	Lactobacillaceae	ywqD		2.7.10.1	ko:K08252,ko:K16554	ko05111,map05111				ko00000,ko00001,ko01000,ko02000	8.A.3.1			Bacteria	1TS4R@1239,3F4BM@33958,4HCEN@91061,COG0489@1,COG0489@2	NA|NA|NA	D	Capsular exopolysaccharide family
PAKBJLMI_01366	272621.LBA1736	1.6e-141	508.8	Lactobacillaceae	epsB												Bacteria	1UZCR@1239,3F4M5@33958,4HE26@91061,COG3944@1,COG3944@2	NA|NA|NA	M	biosynthesis protein
PAKBJLMI_01367	272621.LBA1737	4e-174	617.5	Lactobacillaceae	brpA												Bacteria	1TR1B@1239,3F3MQ@33958,4HA09@91061,COG1316@1,COG1316@2	NA|NA|NA	K	Cell envelope-like function transcriptional attenuator common domain protein
PAKBJLMI_01368	272621.LBA1738	4e-205	720.7	Lactobacillaceae	hflX			ko:K03665					ko00000,ko03009				Bacteria	1TNZB@1239,3F4B2@33958,4HACA@91061,COG2262@1,COG2262@2	NA|NA|NA	S	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
PAKBJLMI_01369	272621.LBA1739	3.2e-189	667.5	Lactobacillaceae													Bacteria	1V1IM@1239,3F43X@33958,4HRX1@91061,COG2340@1,COG2340@2	NA|NA|NA	S	Cysteine-rich secretory protein family
PAKBJLMI_01370	272621.LBA1740	0.0	1858.2	Lactobacillaceae			2.7.13.3	ko:K03407,ko:K03832	ko02020,ko02030,map02020,map02030	M00506			ko00000,ko00001,ko00002,ko01000,ko01001,ko02000,ko02022,ko02035	2.C.1.1			Bacteria	1UYD7@1239,3FC1N@33958,4HWSP@91061,COG0810@1,COG0810@2,COG4886@1,COG4886@2	NA|NA|NA	M	Mycoplasma protein of unknown function, DUF285
PAKBJLMI_01371	272621.LBA1741	3.7e-128	464.5	Lactobacillaceae				ko:K21471					ko00000,ko01000,ko01002,ko01011				Bacteria	1V5H7@1239,3FBE5@33958,4HMYU@91061,COG0791@1,COG0791@2	NA|NA|NA	M	NlpC/P60 family
PAKBJLMI_01372	272621.LBA1743	2.3e-126	458.4	Lactobacillaceae				ko:K21471					ko00000,ko01000,ko01002,ko01011				Bacteria	1VG0Z@1239,3F50V@33958,4HBE9@91061,COG0791@1,COG0791@2	NA|NA|NA	M	NlpC P60 family protein
PAKBJLMI_01373	272621.LBA1744	7.6e-84	316.6	Lactobacillaceae				ko:K21471					ko00000,ko01000,ko01002,ko01011				Bacteria	1V5H7@1239,3F4VI@33958,4IEXC@91061,COG0791@1,COG0791@2	NA|NA|NA	M	NlpC/P60 family
PAKBJLMI_01374	525365.HMPREF0548_1592	1.8e-85	322.0	Lactobacillaceae	gmk2		2.7.4.8	ko:K00942	ko00230,ko01100,map00230,map01100	M00050	R00332,R02090	RC00002	ko00000,ko00001,ko00002,ko01000				Bacteria	1VGNR@1239,3FBPU@33958,4IRT6@91061,COG0194@1,COG0194@2	NA|NA|NA	F	Guanylate kinase homologues.
PAKBJLMI_01375	272621.LBA1746	5.6e-33	146.7	Lactobacillaceae													Bacteria	1U6CF@1239,2DKPT@1,30A91@2,3F7KP@33958,4IG44@91061	NA|NA|NA		
PAKBJLMI_01376	272621.LBA1747	1e-279	968.8	Lactobacillaceae													Bacteria	1V7RP@1239,2EZVI@1,33T01@2,3F4QD@33958,4IEWB@91061	NA|NA|NA	S	O-antigen ligase like membrane protein
PAKBJLMI_01377	272621.LBA1748	8.1e-111	406.4	Lactobacillaceae													Bacteria	1U55V@1239,29DQI@1,300NC@2,3F4UQ@33958,4IEX6@91061	NA|NA|NA		
PAKBJLMI_01378	272621.LBA1749	3.8e-78	297.4	Lactobacillaceae	nrdI			ko:K03647					ko00000				Bacteria	1V9T1@1239,3FBB7@33958,4HJ0M@91061,COG1780@1,COG1780@2	NA|NA|NA	F	NrdI Flavodoxin like
PAKBJLMI_01379	272621.LBA1750	1.7e-181	641.7	Lactobacillaceae	nrdF		1.17.4.1	ko:K00526	ko00230,ko00240,ko01100,map00230,map00240,map01100	M00053	R02017,R02018,R02019,R02024	RC00613	ko00000,ko00001,ko00002,ko01000,ko03400				Bacteria	1TQTH@1239,3F3P1@33958,4H9WX@91061,COG0208@1,COG0208@2	NA|NA|NA	F	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PAKBJLMI_01380	272621.LBA1751	7.8e-78	296.6	Lactobacillaceae													Bacteria	1UFZH@1239,29V33@1,30GGE@2,3F5BQ@33958,4IF1H@91061	NA|NA|NA		
PAKBJLMI_01381	272621.LBA1752	7.7e-137	493.0	Lactobacillaceae	yvpB												Bacteria	1V3XE@1239,3F4HZ@33958,4HJBT@91061,COG4990@1,COG4990@2	NA|NA|NA	S	Peptidase_C39 like family
PAKBJLMI_01382	272621.LBA1753	5.2e-53	213.4	Lactobacillaceae	yitW			ko:K02612	ko00360,ko01120,map00360,map01120		R09838	RC02690	ko00000,ko00001				Bacteria	1V9YV@1239,3F7D5@33958,4HKC6@91061,COG2151@1,COG2151@2	NA|NA|NA	S	Iron-sulfur cluster assembly protein
PAKBJLMI_01383	272621.LBA1754	8.8e-47	192.6	Lactobacillaceae	sufB	GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016788,GO:0034641,GO:0040007,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:1901360		ko:K07033,ko:K09014					ko00000				Bacteria	1TQ21@1239,3F44I@33958,4HA1Z@91061,COG0719@1,COG0719@2	NA|NA|NA	O	assembly protein SufB
PAKBJLMI_01384	272621.LBA1755	4.6e-35	153.3	Lactobacillaceae	sufC	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006790,GO:0008150,GO:0008152,GO:0009314,GO:0009628,GO:0009987,GO:0016043,GO:0016226,GO:0022607,GO:0031163,GO:0044085,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051186,GO:0071840		ko:K09013					ko00000,ko02000			iECH74115_1262.ECH74115_2396,iECIAI1_1343.ECIAI1_1734,iECIAI39_1322.ECIAI39_1376,iECSP_1301.ECSP_2249,iECs_1301.ECs2389,iEcSMS35_1347.EcSMS35_1514,iG2583_1286.G2583_2077,iSFV_1184.SFV_1705,iSFxv_1172.SFxv_1919,iSSON_1240.SSON_1474,iS_1188.S1844,iZ_1308.Z2710	Bacteria	1TQ98@1239,3F3XT@33958,4HAD9@91061,COG0396@1,COG0396@2	NA|NA|NA	O	FeS assembly ATPase SufC
PAKBJLMI_01385	272621.LBA1757	7.8e-85	319.7	Lactobacillaceae													Bacteria	1V6P0@1239,3F63I@33958,4HJ1Y@91061,COG3610@1,COG3610@2	NA|NA|NA	S	Threonine/Serine exporter, ThrE
PAKBJLMI_01386	272621.LBA1758	1.7e-137	495.4	Lactobacillaceae	thrE												Bacteria	1TSE8@1239,3F4XE@33958,4HBW1@91061,COG2966@1,COG2966@2	NA|NA|NA	S	Putative threonine/serine exporter
PAKBJLMI_01387	272621.LBA1759	2.1e-293	1014.2	Lactobacillaceae				ko:K06158					ko00000,ko03012				Bacteria	1TPAX@1239,3FC7X@33958,4HC58@91061,COG0488@1,COG0488@2	NA|NA|NA	S	ABC transporter
PAKBJLMI_01388	272621.LBA1760	3.6e-61	240.7	Lactobacillaceae													Bacteria	1U5V0@1239,29NYN@1,309WR@2,3F6IV@33958,4IFIN@91061	NA|NA|NA		
PAKBJLMI_01389	1033837.WANG_1317	1.3e-45	189.5	Lactobacillaceae	rimL			ko:K03817					ko00000,ko01000,ko03009				Bacteria	1V3NE@1239,3F6YW@33958,4HG1N@91061,COG1670@1,COG1670@2	NA|NA|NA	J	Acetyltransferase (GNAT) domain
PAKBJLMI_01390	272621.LBA1762	1.5e-223	781.9	Lactobacillaceae	brpA												Bacteria	1TR1B@1239,3F3MQ@33958,4HA09@91061,COG1316@1,COG1316@2	NA|NA|NA	K	Cell envelope-like function transcriptional attenuator common domain protein
PAKBJLMI_01391	272621.LBA1763	0.0	1202.2	Lactobacillaceae	pepF	GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006465,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009987,GO:0010467,GO:0016485,GO:0016787,GO:0019538,GO:0034641,GO:0043170,GO:0043603,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0051604,GO:0070011,GO:0071704,GO:0140096,GO:1901564		ko:K08602					ko00000,ko01000,ko01002				Bacteria	1TP4P@1239,3F4E5@33958,4HA7X@91061,COG1164@1,COG1164@2	NA|NA|NA	E	oligoendopeptidase F
PAKBJLMI_01392	272621.LBA1765	6.7e-44	183.0	Bacteria				ko:K03449					ko00000,ko02000	2.A.1.17			Bacteria	COG2807@1,COG2807@2	NA|NA|NA	P	transmembrane transport
PAKBJLMI_01393	272621.LBA1768	7e-265	919.5	Lactobacillaceae	lctP	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944		ko:K03303					ko00000,ko02000	2.A.14			Bacteria	1TQNM@1239,3F4EG@33958,4HAF3@91061,COG1620@1,COG1620@2	NA|NA|NA	C	L-lactate permease
PAKBJLMI_01394	272621.LBA1769	1.4e-62	245.4	Lactobacillaceae	pdxH			ko:K07006					ko00000				Bacteria	1VW4G@1239,3F6IW@33958,4HW37@91061,COG3576@1,COG3576@2	NA|NA|NA	S	Pyridoxamine 5'-phosphate oxidase
PAKBJLMI_01395	272621.LBA1771	7.9e-135	486.5	Lactobacillaceae	znuB			ko:K02075,ko:K09816	ko02010,map02010	M00242,M00244			ko00000,ko00001,ko00002,ko02000	3.A.1.15,3.A.1.15.3,3.A.1.15.5			Bacteria	1V0SX@1239,3F4BC@33958,4HE09@91061,COG1108@1,COG1108@2	NA|NA|NA	U	ABC 3 transport family
PAKBJLMI_01396	272621.LBA1772	1e-116	426.0	Lactobacillaceae	fhuC			ko:K02074,ko:K09817	ko02010,map02010	M00242,M00244			ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.15,3.A.1.15.3,3.A.1.15.5			Bacteria	1TQ68@1239,3F49M@33958,4HAZI@91061,COG1121@1,COG1121@2	NA|NA|NA	P	ABC transporter
PAKBJLMI_01397	272621.LBA1773	6.4e-165	586.6	Lactobacillaceae	psaA			ko:K02077		M00244			ko00000,ko00002,ko02000	3.A.1.15			Bacteria	1TRKU@1239,3F4B9@33958,4HAKT@91061,COG0803@1,COG0803@2	NA|NA|NA	P	Belongs to the bacterial solute-binding protein 9 family
PAKBJLMI_01398	272621.LBA1774	2.5e-43	181.0	Lactobacillaceae													Bacteria	1VA6G@1239,3F72A@33958,4HKYT@91061,COG0640@1,COG0640@2	NA|NA|NA	K	helix_turn_helix, Arsenical Resistance Operon Repressor
PAKBJLMI_01399	272621.LBA1775	5.1e-75	287.0	Lactobacillaceae													Bacteria	1U5WZ@1239,3F6MT@33958,4IFKG@91061,COG3279@1,COG3279@2	NA|NA|NA	K	LytTr DNA-binding domain
PAKBJLMI_01400	272621.LBA1776	5.5e-47	193.7	Lactobacillaceae													Bacteria	1U62T@1239,29P3F@1,30A1N@2,3F6WA@33958,4IFRY@91061	NA|NA|NA	S	Protein of unknown function (DUF3021)
PAKBJLMI_01401	272621.LBA1777	0.0	1242.3	Lactobacillaceae	fruA		2.7.1.202,2.7.1.204	ko:K02768,ko:K02769,ko:K02770,ko:K02806,ko:K20112	ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060	M00273,M00807	R03232,R11171	RC00017,RC03206	ko00000,ko00001,ko00002,ko01000,ko02000	4.A.2.1,4.A.5			Bacteria	1TPKU@1239,3F44C@33958,4H9KR@91061,COG1299@1,COG1299@2,COG1445@1,COG1445@2,COG1762@1,COG1762@2	NA|NA|NA	GT	Phosphotransferase System
PAKBJLMI_01402	272621.LBA1778	3.3e-169	600.9	Lactobacillaceae	pfkB		2.7.1.11,2.7.1.56	ko:K00882,ko:K16370	ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130,map01200,map01230	M00001,M00345	R00756,R02071,R03236,R03237,R03238,R03239,R04779	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000				Bacteria	1TQ36@1239,3F3SG@33958,4HANU@91061,COG1105@1,COG1105@2	NA|NA|NA	H	Belongs to the carbohydrate kinase PfkB family. LacC subfamily
PAKBJLMI_01403	272621.LBA1779	5.2e-136	490.3	Lactobacillaceae	fruR			ko:K03436					ko00000,ko03000				Bacteria	1TSF8@1239,3F3JB@33958,4HDT9@91061,COG1349@1,COG1349@2	NA|NA|NA	K	DeoR C terminal sensor domain
PAKBJLMI_01404	272621.LBA1780	6.3e-196	689.9	Lactobacillaceae	fic												Bacteria	1TQMC@1239,3F45Y@33958,4HBA4@91061,COG3177@1,COG3177@2	NA|NA|NA	S	Fic/DOC family
PAKBJLMI_01405	272621.LBA1782	1.9e-217	761.5	Lactobacillaceae	natB			ko:K01992		M00254			ko00000,ko00002,ko02000	3.A.1			Bacteria	1TXRK@1239,3F3KA@33958,4HC9K@91061,COG1668@1,COG1668@2	NA|NA|NA	CP	ABC-2 family transporter protein
PAKBJLMI_01406	272621.LBA1783	2.6e-166	591.3	Lactobacillaceae	natA			ko:K01990		M00254			ko00000,ko00002,ko02000	3.A.1			Bacteria	1TR06@1239,3F4J8@33958,4H9RX@91061,COG4152@1,COG4152@2	NA|NA|NA	S	ABC transporter, ATP-binding protein
PAKBJLMI_01407	272621.LBA1784	6.2e-08	62.0	Lactobacillaceae													Bacteria	1U74F@1239,29PW8@1,30AUJ@2,3F8YQ@33958,4IGZ2@91061	NA|NA|NA		
PAKBJLMI_01408	272621.LBA1786	4e-69	267.3	Lactobacillaceae													Bacteria	1U6H1@1239,29PEP@1,30ACV@2,3F7WP@33958,4IG99@91061	NA|NA|NA		
PAKBJLMI_01409	272621.LBA1787	2.1e-25	120.9	Lactobacillaceae													Bacteria	1U6I8@1239,2B46M@1,30ADR@2,3F7YW@33958,4IGAJ@91061	NA|NA|NA		
PAKBJLMI_01410	1423767.BALU01000001_gene1429	8.2e-31	139.0	Lactobacillaceae	yozG			ko:K07727					ko00000,ko03000				Bacteria	1VESP@1239,3F802@33958,4HPRB@91061,COG3655@1,COG3655@2	NA|NA|NA	K	Transcriptional regulator
PAKBJLMI_01411	272621.LBA1789	9e-90	336.3	Lactobacillaceae													Bacteria	1U5MT@1239,29NUX@1,309T1@2,3F67G@33958,4IFCK@91061	NA|NA|NA		
PAKBJLMI_01412	891391.LAC30SC_09710	8.8e-21	105.5	Lactobacillaceae													Bacteria	1U739@1239,29PVE@1,30ATN@2,3F8X7@33958,4IGXU@91061	NA|NA|NA		
PAKBJLMI_01417	272621.LBA1793	8.1e-209	733.0	Bacilli	blpT												Bacteria	1W6SH@1239,2DWQH@1,341F6@2,4HX74@91061	NA|NA|NA		
PAKBJLMI_01418	272621.LBA1794	3.4e-106	391.0	Lactobacillaceae				ko:K20345	ko02024,map02024				ko00000,ko00001,ko02000	3.A.1.112,8.A.1			Bacteria	1V5C8@1239,3F5W4@33958,4HHKB@91061,COG0845@1,COG0845@2	NA|NA|NA	M	Transport protein ComB
PAKBJLMI_01419	272621.LBA1796	0.0	1369.0	Lactobacillaceae	comA	GO:0003674,GO:0003824,GO:0005215,GO:0005319,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006869,GO:0008150,GO:0010876,GO:0015399,GO:0015405,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0033036,GO:0034040,GO:0042623,GO:0042626,GO:0043492,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944		ko:K06147,ko:K06148,ko:K12292,ko:K20344	ko02010,ko02020,ko02024,map02010,map02020,map02024				ko00000,ko00001,ko01000,ko02000	3.A.1,3.A.1.106,3.A.1.109,3.A.1.112,3.A.1.112.1,3.A.1.21			Bacteria	1V77J@1239,3F3QF@33958,4HAX2@91061,COG2274@1,COG2274@2	NA|NA|NA	V	ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
PAKBJLMI_01420	748671.LCRIS_01821	4.2e-07	61.2	Lactobacillaceae													Bacteria	1U7PT@1239,29Q8R@1,30B7T@2,3F9ZR@33958,4IHM3@91061	NA|NA|NA		
PAKBJLMI_01422	272621.LBA1798	1.2e-146	525.8	Lactobacillaceae				ko:K07707	ko02020,ko02024,map02020,map02024	M00495			ko00000,ko00001,ko00002,ko02022				Bacteria	1V392@1239,3F61S@33958,4HHAI@91061,COG3279@1,COG3279@2	NA|NA|NA	K	LytTr DNA-binding domain
PAKBJLMI_01423	272621.LBA1799	8e-233	812.8	Lactobacillaceae			2.7.13.3	ko:K07706	ko02020,ko02024,map02020,map02024	M00495			ko00000,ko00001,ko00002,ko01000,ko01001,ko02022				Bacteria	1V1ET@1239,3F71I@33958,4HGNA@91061,COG3290@1,COG3290@2	NA|NA|NA	T	GHKL domain
PAKBJLMI_01427	272621.LBA1804	7e-110	403.3	Lactobacillaceae													Bacteria	1U8G2@1239,2DIT5@1,30433@2,3FAXZ@33958,4IIDU@91061	NA|NA|NA		
PAKBJLMI_01429	525365.HMPREF0548_1545	5.1e-109	401.4	Lactobacillaceae				ko:K07052					ko00000				Bacteria	1VNA9@1239,3F5T9@33958,4HRMP@91061,COG1266@1,COG1266@2	NA|NA|NA	S	CAAX protease self-immunity
PAKBJLMI_01430	272621.LBA1810	1.2e-216	758.8	Lactobacillaceae				ko:K07052					ko00000				Bacteria	1U6ZV@1239,3F8SI@33958,4IGU6@91061,COG1266@1,COG1266@2	NA|NA|NA	S	CAAX protease self-immunity
PAKBJLMI_01431	272621.LBA1811	1.4e-37	161.8	Lactobacillaceae													Bacteria	1U6IT@1239,29PFZ@1,30AE4@2,3F800@33958,4IGB6@91061	NA|NA|NA	S	Enterocin A Immunity
PAKBJLMI_01432	272621.LBA1812	0.0	1603.2	Lactobacillaceae	malZ		3.2.1.20	ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100		R00028,R00801,R00802,R06087,R06088	RC00028,RC00049,RC00077	ko00000,ko00001,ko01000		GH31		Bacteria	1TR8N@1239,3F4CE@33958,4HB1D@91061,COG1501@1,COG1501@2	NA|NA|NA	G	Belongs to the glycosyl hydrolase 31 family
PAKBJLMI_01433	272621.LBA1813	1.1e-26	125.2	Lactobacillaceae													Bacteria	1U6SR@1239,2B46M@1,31WXN@2,3F8F7@33958,4IGKA@91061	NA|NA|NA		
PAKBJLMI_01434	272621.LBA1814	1.5e-33	148.3	Lactobacillaceae													Bacteria	1U6VJ@1239,2AS5U@1,31HIR@2,3F8JX@33958,4IGPG@91061	NA|NA|NA		
PAKBJLMI_01435	272621.LBA1815	4e-53	213.8	Lactobacillaceae													Bacteria	1U65A@1239,29P5G@1,30A3N@2,3F737@33958,4IFV3@91061	NA|NA|NA	S	Enterocin A Immunity
PAKBJLMI_01436	272621.LBA1816	9.4e-49	199.1	Lactobacillaceae													Bacteria	1U6M7@1239,2DKRC@1,30AG3@2,3F852@33958,4IGE2@91061	NA|NA|NA	S	Enterocin A Immunity
PAKBJLMI_01437	272621.LBA1817	7.2e-146	523.1	Lactobacillaceae	racD		5.1.1.13	ko:K01779	ko00250,ko01054,map00250,map01054		R00491	RC00302	ko00000,ko00001,ko01000				Bacteria	1TQ6M@1239,3FCEP@33958,4HR12@91061,COG1794@1,COG1794@2	NA|NA|NA	M	Belongs to the aspartate glutamate racemases family
PAKBJLMI_01438	272621.LBA1818	2.5e-305	1053.9	Lactobacillaceae	murE		6.3.2.13,6.3.2.7	ko:K01928,ko:K05362	ko00300,ko00550,ko01100,map00300,map00550,map01100		R02786,R02788	RC00064,RC00090	ko00000,ko00001,ko01000,ko01011				Bacteria	1TPQE@1239,3F3UE@33958,4H9T1@91061,COG0769@1,COG0769@2	NA|NA|NA	M	Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
PAKBJLMI_01439	272621.LBA1819	5.8e-195	686.8	Lactobacillaceae	hpk31		2.7.13.3	ko:K07636	ko02020,map02020	M00434			ko00000,ko00001,ko00002,ko01000,ko01001,ko02022				Bacteria	1TRZ0@1239,3FC2N@33958,4H9U1@91061,COG5002@1,COG5002@2	NA|NA|NA	T	His Kinase A (phospho-acceptor) domain
PAKBJLMI_01440	272621.LBA1820	2.5e-121	441.4	Lactobacillaceae													Bacteria	1TP9M@1239,3F3Y0@33958,4HB3T@91061,COG0745@1,COG0745@2	NA|NA|NA	K	response regulator
PAKBJLMI_01441	272621.LBA1821	0.0	1194.1	Lactobacillaceae				ko:K06147					ko00000,ko02000	3.A.1.106,3.A.1.109,3.A.1.21			Bacteria	1TP0B@1239,3F3PD@33958,4HA3S@91061,COG1132@1,COG1132@2	NA|NA|NA	V	ABC transporter
PAKBJLMI_01442	272621.LBA1822	1.3e-304	1051.6	Lactobacillaceae				ko:K06147,ko:K06148,ko:K18891	ko02010,map02010	M00708			ko00000,ko00001,ko00002,ko02000	3.A.1,3.A.1.106,3.A.1.109,3.A.1.135,3.A.1.21			Bacteria	1TP0B@1239,3F3SP@33958,4H9SC@91061,COG1132@1,COG1132@2	NA|NA|NA	V	ABC transporter, ATP-binding protein
PAKBJLMI_01443	272621.LBA1823	2e-138	498.4	Lactobacillaceae	XK27_01040												Bacteria	1VF5N@1239,3F4JS@33958,4HH7B@91061,COG4858@1,COG4858@2	NA|NA|NA	S	Protein of unknown function (DUF1129)
PAKBJLMI_01444	272621.LBA1824	1.6e-202	711.8	Lactobacillaceae	ychF	GO:0003674,GO:0003824,GO:0004857,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006950,GO:0006979,GO:0008150,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030234,GO:0043021,GO:0043022,GO:0043023,GO:0043086,GO:0044092,GO:0044424,GO:0044464,GO:0044877,GO:0050790,GO:0050896,GO:0065007,GO:0065009,GO:0098772		ko:K06942					ko00000,ko03009				Bacteria	1TPRK@1239,3F3TK@33958,4H9SQ@91061,COG0012@1,COG0012@2	NA|NA|NA	J	ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
PAKBJLMI_01445	272621.LBA1825	9.6e-45	185.7	Lactobacillaceae	yyzM												Bacteria	1VEQ7@1239,3F823@33958,4HNHU@91061,COG4481@1,COG4481@2	NA|NA|NA	S	Bacterial protein of unknown function (DUF951)
PAKBJLMI_01446	272621.LBA1826	3.4e-155	554.3	Lactobacillaceae	spo0J	GO:0005575,GO:0005622,GO:0005623,GO:0007059,GO:0008150,GO:0009295,GO:0009987,GO:0022603,GO:0042173,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043590,GO:0043937,GO:0043938,GO:0044424,GO:0044464,GO:0045595,GO:0045597,GO:0045881,GO:0048518,GO:0048522,GO:0050789,GO:0050793,GO:0050794,GO:0051094,GO:0065007		ko:K03497					ko00000,ko03000,ko03036,ko04812				Bacteria	1TQ2B@1239,3F47R@33958,4H9TB@91061,COG1475@1,COG1475@2	NA|NA|NA	K	Belongs to the ParB family
PAKBJLMI_01447	272621.LBA1827	1.3e-137	495.7	Lactobacillaceae	soj			ko:K03496					ko00000,ko03036,ko04812				Bacteria	1TP8S@1239,3F4AE@33958,4HAYM@91061,COG1192@1,COG1192@2	NA|NA|NA	D	Sporulation initiation inhibitor
PAKBJLMI_01448	272621.LBA1828	7.2e-147	526.6	Lactobacillaceae	noc			ko:K03497					ko00000,ko03000,ko03036,ko04812				Bacteria	1TP0I@1239,3F4RU@33958,4HAC6@91061,COG1475@1,COG1475@2	NA|NA|NA	K	Belongs to the ParB family
PAKBJLMI_01449	272621.LBA1829	1.4e-130	472.2	Lactobacillaceae	rsmG	GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360	2.1.1.170	ko:K03501					ko00000,ko01000,ko03009,ko03036				Bacteria	1TPBT@1239,3F3ZX@33958,4HAAZ@91061,COG0357@1,COG0357@2	NA|NA|NA	J	Specifically methylates the N7 position of a guanine in 16S rRNA
PAKBJLMI_01450	272621.LBA1830	7.9e-54	216.9	Lactobacillaceae	cvpA	GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008152,GO:0009058,GO:0009403,GO:0009404,GO:0009987,GO:0016020,GO:0019748,GO:0044237,GO:0044249,GO:0044464,GO:0044550,GO:0071944		ko:K03558					ko00000				Bacteria	1U58E@1239,3F552@33958,4IEZI@91061,COG1286@1,COG1286@2	NA|NA|NA	S	Colicin V production protein
PAKBJLMI_01451	272621.LBA1831	3.5e-182	644.0	Lactobacillaceae	apbE		2.7.1.180	ko:K03734					ko00000,ko01000				Bacteria	1TR9C@1239,3F3QR@33958,4HHVC@91061,COG1477@1,COG1477@2	NA|NA|NA	H	Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PAKBJLMI_01452	272621.LBA1832	2.5e-149	534.6	Lactobacillaceae			3.1.3.48	ko:K01104					ko00000,ko01000				Bacteria	1VA24@1239,3F4H4@33958,4IQXZ@91061,COG2365@1,COG2365@2	NA|NA|NA	T	Tyrosine phosphatase family
PAKBJLMI_01453	272621.LBA1833	3.1e-98	364.4	Lactobacillaceae	azr		1.5.1.36	ko:K22393,ko:K22394	ko00740,ko01100,map00740,map01100		R05705,R09748,R09750	RC00126	ko00000,ko00001,ko01000				Bacteria	1TT2S@1239,3F544@33958,4HBQI@91061,COG0431@1,COG0431@2	NA|NA|NA	S	NADPH-dependent FMN reductase
PAKBJLMI_01454	272621.LBA1834	7.6e-97	359.8	Lactobacillaceae	nqr		1.5.1.36	ko:K22393,ko:K22394	ko00740,ko01100,map00740,map01100		R05705,R09748,R09750	RC00126	ko00000,ko00001,ko01000				Bacteria	1VI8F@1239,3FCC2@33958,4HPT0@91061,COG0431@1,COG0431@2	NA|NA|NA	S	NADPH-dependent FMN reductase
PAKBJLMI_01455	272621.LBA1835	1.3e-111	409.1	Lactobacillaceae													Bacteria	1U9UE@1239,3F403@33958,4HM7U@91061,COG1309@1,COG1309@2	NA|NA|NA	K	WHG domain
PAKBJLMI_01456	525365.HMPREF0548_1514	1.5e-36	158.3	Lactobacillaceae													Bacteria	1U6B2@1239,2A5EV@1,30U4Q@2,3F7HR@33958,4IG2J@91061	NA|NA|NA		
PAKBJLMI_01457	272621.LBA1837	1.1e-277	961.8	Lactobacillaceae	pipD			ko:K08659					ko00000,ko01000,ko01002				Bacteria	1TQ0F@1239,3F3M4@33958,4HC3G@91061,COG4690@1,COG4690@2	NA|NA|NA	E	Dipeptidase
PAKBJLMI_01458	272621.LBA1838	9.8e-118	429.5	Lactobacillaceae	devA		3.6.3.25	ko:K02003,ko:K06020,ko:K09810	ko02010,map02010	M00255,M00258			ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1,3.A.1.125			Bacteria	1TQP5@1239,3F4RP@33958,4HBXK@91061,COG1136@1,COG1136@2	NA|NA|NA	V	ABC transporter, ATP-binding protein
PAKBJLMI_01459	272621.LBA1839	1.3e-180	639.0	Lactobacillaceae	hrtB			ko:K02004		M00258			ko00000,ko00002,ko02000	3.A.1			Bacteria	1TWFZ@1239,3F3K5@33958,4H9RQ@91061,COG0577@1,COG0577@2	NA|NA|NA	V	ABC transporter permease
PAKBJLMI_01460	272621.LBA1840	4.8e-96	357.1	Lactobacillaceae	ygfC												Bacteria	1V4D3@1239,3F6ZM@33958,4HJ8Z@91061,COG1309@1,COG1309@2	NA|NA|NA	K	Bacterial regulatory proteins, tetR family
PAKBJLMI_01461	272621.LBA1841	2.4e-112	411.4	Lactobacillaceae			3.1.3.73	ko:K02226	ko00860,ko01100,map00860,map01100	M00122	R04594,R11173	RC00017	ko00000,ko00001,ko00002,ko01000				Bacteria	1V6ES@1239,3F5SD@33958,4HGZI@91061,COG0406@1,COG0406@2	NA|NA|NA	G	phosphoglycerate mutase
PAKBJLMI_01462	272621.LBA1842	2e-140	505.0	Lactobacillaceae	aroD			ko:K06889					ko00000				Bacteria	1V43W@1239,3F4SI@33958,4HNBU@91061,COG1073@1,COG1073@2	NA|NA|NA	S	Alpha/beta hydrolase family
PAKBJLMI_01463	272621.LBA1843	2e-143	515.0	Lactobacillaceae				ko:K09861					ko00000				Bacteria	1TR33@1239,3F4KR@33958,4HFN2@91061,COG3022@1,COG3022@2	NA|NA|NA	S	Belongs to the UPF0246 family
PAKBJLMI_01464	272621.LBA1844	3.8e-119	434.1	Lactobacillaceae													Bacteria	1U59M@1239,2CBCD@1,309KB@2,3F5A8@33958,4IF11@91061	NA|NA|NA		
PAKBJLMI_01465	272621.LBA1845	4.6e-159	567.0	Lactobacillaceae			2.7.7.12	ko:K00965	ko00052,ko00520,ko01100,ko04917,map00052,map00520,map01100,map04917	M00362,M00554,M00632	R00955	RC00002	ko00000,ko00001,ko00002,ko01000				Bacteria	1TSNU@1239,3F3JH@33958,4H9TY@91061,COG1085@1,COG1085@2	NA|NA|NA	C	Domain of unknown function (DUF4931)
PAKBJLMI_01466	272621.LBA1846	9.3e-220	769.2	Lactobacillaceae													Bacteria	1TQMA@1239,3F3QW@33958,4HDTN@91061,COG1376@1,COG1376@2	NA|NA|NA	S	Putative peptidoglycan binding domain
PAKBJLMI_01467	272621.LBA1847	2.6e-26	124.0	Lactobacillaceae													Bacteria	1U6RB@1239,29PKP@1,30AIV@2,3F8CU@33958,4IGIQ@91061	NA|NA|NA		
PAKBJLMI_01468	272621.LBA1848	1.3e-252	878.6	Lactobacillaceae	dtpT	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944		ko:K03305					ko00000	2.A.17			Bacteria	1TP81@1239,3F4WU@33958,4HAF2@91061,COG3104@1,COG3104@2	NA|NA|NA	U	amino acid peptide transporter
PAKBJLMI_01469	272621.LBA1849	0.0	1696.4	Lactobacillaceae	pepN	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464	3.4.11.2	ko:K01256,ko:K08776	ko00480,ko01100,map00480,map01100		R00899,R04951	RC00096,RC00141	ko00000,ko00001,ko01000,ko01002				Bacteria	1TR43@1239,3F3UH@33958,4HA20@91061,COG0308@1,COG0308@2	NA|NA|NA	E	aminopeptidase
PAKBJLMI_01470	272621.LBA1850	4.5e-61	240.4	Lactobacillaceae	lysM												Bacteria	1U5V5@1239,3F6J1@33958,4IFIT@91061,COG1388@1,COG1388@2	NA|NA|NA	M	LysM domain
PAKBJLMI_01471	272621.LBA1852	6.1e-177	626.7	Lactobacillaceae													Bacteria	1U59F@1239,29NN9@1,309K7@2,3F59C@33958,4IF0Q@91061	NA|NA|NA		
PAKBJLMI_01472	272621.LBA1853	2.8e-102	377.9	Lactobacillaceae	mdtG	GO:0006810,GO:0006855,GO:0008150,GO:0015893,GO:0042221,GO:0042493,GO:0050896,GO:0051179,GO:0051234,GO:0055085		ko:K08161					ko00000,ko02000	2.A.1.2.20			Bacteria	1U64Q@1239,3F71M@33958,4IFU9@91061,COG0477@1,COG2814@2	NA|NA|NA	EGP	Major Facilitator Superfamily
PAKBJLMI_01473	272621.LBA1854	2.9e-114	417.9	Lactobacillaceae	mdtG	GO:0006810,GO:0006855,GO:0008150,GO:0015893,GO:0042221,GO:0042493,GO:0050896,GO:0051179,GO:0051234,GO:0055085		ko:K08161					ko00000,ko02000	2.A.1.2.20			Bacteria	1TRDJ@1239,3F3T5@33958,4H9Q9@91061,COG0477@1,COG2814@2	NA|NA|NA	EGP	Major facilitator Superfamily
PAKBJLMI_01475	272621.LBA1857	6e-213	746.5	Lactobacillaceae													Bacteria	1V7GP@1239,3F42R@33958,4HJ4R@91061,COG1835@1,COG1835@2	NA|NA|NA	I	transferase activity, transferring acyl groups other than amino-acyl groups
PAKBJLMI_01476	272621.LBA1858	1.2e-91	342.4	Lactobacillaceae	ymdB												Bacteria	1TPCU@1239,3F6GV@33958,4HIHC@91061,COG2110@1,COG2110@2	NA|NA|NA	S	Macro domain protein
PAKBJLMI_01477	272621.LBA1859	0.0	1122.5	Lactobacillaceae	nisT			ko:K06147					ko00000,ko02000	3.A.1.106,3.A.1.109,3.A.1.21			Bacteria	1TPZP@1239,3F53S@33958,4HDMH@91061,COG1132@1,COG1132@2	NA|NA|NA	V	ABC transporter
PAKBJLMI_01478	416870.llmg_0328	3.7e-07	60.5	Bacilli													Bacteria	1VXF3@1239,2DWS2@1,341MY@2,4HXEC@91061	NA|NA|NA		
PAKBJLMI_01480	272621.LBA1862	1.6e-146	525.4	Lactobacillaceae													Bacteria	1U53D@1239,29NJE@1,309HA@2,3F4BT@33958,4IEUP@91061	NA|NA|NA	K	Helix-turn-helix XRE-family like proteins
PAKBJLMI_01481	272621.LBA1863	6.7e-84	316.6	Lactobacillaceae													Bacteria	1U60N@1239,29NJE@1,30RS9@2,3F6SP@33958,4IFPF@91061	NA|NA|NA		
PAKBJLMI_01482	272621.LBA1864	1.4e-148	532.3	Lactobacillaceae	malG			ko:K15772	ko02010,map02010	M00491			ko00000,ko00001,ko00002,ko02000	3.A.1.1.16,3.A.1.1.2			Bacteria	1TRB7@1239,3F4NP@33958,4HC5K@91061,COG3833@1,COG3833@2	NA|NA|NA	P	ABC transporter permease
PAKBJLMI_01483	272621.LBA1865	7.9e-252	875.9	Lactobacillaceae	malF			ko:K02025,ko:K02026,ko:K10118,ko:K10121,ko:K15771	ko02010,map02010	M00196,M00197,M00207,M00491			ko00000,ko00001,ko00002,ko02000	3.A.1.1,3.A.1.1.16,3.A.1.1.2,3.A.1.1.20,3.A.1.1.28			Bacteria	1TR2A@1239,3F4J1@33958,4HB8H@91061,COG1175@1,COG1175@2	NA|NA|NA	P	Binding-protein-dependent transport system inner membrane component
PAKBJLMI_01484	272621.LBA1866	5.9e-214	750.0	Lactobacillaceae	malE			ko:K10120,ko:K15770	ko02010,map02010	M00197,M00491			ko00000,ko00001,ko00002,ko02000	3.A.1.1.16,3.A.1.1.2,3.A.1.1.20			Bacteria	1TPU9@1239,3F50T@33958,4HAK6@91061,COG2182@1,COG2182@2	NA|NA|NA	G	Bacterial extracellular solute-binding protein
PAKBJLMI_01485	272621.LBA1867	1.6e-210	738.4	Lactobacillaceae	msmX			ko:K10112	ko02010,map02010	M00194,M00196,M00197,M00200,M00201,M00206,M00207,M00491,M00602,M00605,M00606			ko00000,ko00001,ko00002,ko02000	3.A.1.1			Bacteria	1TP2M@1239,3FC3D@33958,4HAMQ@91061,COG3842@1,COG3842@2	NA|NA|NA	P	Belongs to the ABC transporter superfamily
PAKBJLMI_01486	272621.LBA1868	7e-264	916.0	Lactobacillaceae				ko:K07497					ko00000				Bacteria	1TQQY@1239,3FCFA@33958,4HC8M@91061,COG2801@1,COG2801@2	NA|NA|NA	L	COG2963 Transposase and inactivated derivatives
PAKBJLMI_01487	272621.LBA1869	9.6e-118	429.5	Lactobacillaceae	pgmB	GO:0000287,GO:0003674,GO:0003824,GO:0004805,GO:0005488,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005975,GO:0005984,GO:0005991,GO:0005992,GO:0006793,GO:0006796,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008801,GO:0009058,GO:0009292,GO:0009294,GO:0009311,GO:0009312,GO:0009987,GO:0016020,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0016853,GO:0016866,GO:0016868,GO:0019203,GO:0030312,GO:0033554,GO:0034637,GO:0040007,GO:0042221,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044262,GO:0044424,GO:0044444,GO:0044464,GO:0044764,GO:0046351,GO:0046677,GO:0046872,GO:0050896,GO:0051704,GO:0051716,GO:0071704,GO:0071944,GO:1901576	2.4.1.64,3.1.3.12,3.2.1.28,5.4.2.6	ko:K01087,ko:K01194,ko:K01838,ko:K05342	ko00500,ko01100,map00500,map01100		R00010,R02727,R02728,R02778,R11310	RC00017,RC00049,RC00408	ko00000,ko00001,ko00537,ko01000		GH37,GH65		Bacteria	1UY8N@1239,3F4ST@33958,4HF3K@91061,COG0637@1,COG0637@2	NA|NA|NA	S	beta-phosphoglucomutase
PAKBJLMI_01488	272621.LBA1870	0.0	1564.3	Lactobacillaceae	map2		2.4.1.8	ko:K00691	ko00500,ko01100,map00500,map01100		R01555	RC00049	ko00000,ko00001,ko01000		GH65		Bacteria	1TQMB@1239,3F3PG@33958,4HAVB@91061,COG1554@1,COG1554@2	NA|NA|NA	G	hydrolase, family 65, central catalytic
PAKBJLMI_01489	272621.LBA1871	0.0	1217.6	Lactobacillaceae	nplT		3.2.1.133,3.2.1.135,3.2.1.54	ko:K01208	ko00500,ko01100,map00500,map01100		R02112,R03122,R11262		ko00000,ko00001,ko01000		GH13		Bacteria	1TNZ0@1239,3F41N@33958,4HB67@91061,COG0366@1,COG0366@2	NA|NA|NA	G	Belongs to the glycosyl hydrolase 13 family
PAKBJLMI_01490	272621.LBA1872	0.0	1146.7	Lactobacillaceae	malL		3.2.1.10,3.2.1.20	ko:K01182,ko:K01187	ko00052,ko00500,ko01100,map00052,map00500,map01100		R00028,R00801,R00802,R01718,R01791,R06087,R06088,R06199	RC00028,RC00049,RC00059,RC00077,RC00451	ko00000,ko00001,ko01000		GH13,GH31		Bacteria	1UY2T@1239,3FC10@33958,4HBRE@91061,COG0366@1,COG0366@2	NA|NA|NA	G	Alpha amylase, catalytic domain
PAKBJLMI_01491	272621.LBA1873	9.4e-217	759.2	Lactobacillaceae	ackA	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464	2.7.2.1	ko:K00925	ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200	M00357,M00579	R00315,R01353	RC00002,RC00043	ko00000,ko00001,ko00002,ko01000			iNJ661.Rv0409	Bacteria	1TQ22@1239,3F48Z@33958,4HA7K@91061,COG0282@1,COG0282@2	NA|NA|NA	F	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PAKBJLMI_01492	272621.LBA1874	4.8e-179	633.6	Lactobacillaceae	yvdE			ko:K02529					ko00000,ko03000				Bacteria	1U6Z4@1239,3F3ZC@33958,4HC2A@91061,COG1609@1,COG1609@2	NA|NA|NA	K	helix_turn _helix lactose operon repressor
PAKBJLMI_01493	272621.LBA1875	6.7e-147	526.6	Lactobacillaceae	ptp2		3.1.3.48	ko:K01104					ko00000,ko01000				Bacteria	1W78R@1239,3F4QQ@33958,4IEVA@91061,COG2365@1,COG2365@2	NA|NA|NA	T	Tyrosine phosphatase family
PAKBJLMI_01494	272621.LBA1876	6.8e-295	1019.2	Lactobacillaceae				ko:K06147,ko:K06148					ko00000,ko02000	3.A.1,3.A.1.106,3.A.1.109,3.A.1.21			Bacteria	1V08F@1239,3F517@33958,4HTAU@91061,COG1132@1,COG1132@2	NA|NA|NA	V	ABC transporter transmembrane region
PAKBJLMI_01495	272621.LBA1877	5e-75	287.0	Lactobacillaceae													Bacteria	1U60N@1239,29NJE@1,30RS9@2,3F6SP@33958,4IFPF@91061	NA|NA|NA		
PAKBJLMI_01496	257314.LJ_1297	3.4e-16	90.9	Lactobacillaceae													Bacteria	1U60N@1239,29NJE@1,30RS9@2,3F6SP@33958,4IFPF@91061	NA|NA|NA		
PAKBJLMI_01497	272621.LBA1878	1.4e-294	1018.1	Lactobacillaceae	glpK	GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615	2.7.1.30	ko:K00864	ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626		R00847	RC00002,RC00017	ko00000,ko00001,ko01000,ko04147				Bacteria	1TPX3@1239,3F3WI@33958,4H9ZF@91061,COG0554@1,COG0554@2	NA|NA|NA	F	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
PAKBJLMI_01498	272621.LBA1879	2.4e-150	538.1	Lactobacillaceae	thiD	GO:0008150,GO:0040007	2.5.1.3,2.7.1.49,2.7.4.7,4.1.99.17	ko:K00941,ko:K03147,ko:K21219	ko00730,ko01100,map00730,map01100	M00127	R03223,R03471,R03472,R04509,R10712	RC00002,RC00017,RC00224,RC03251,RC03252,RC03255,RC03397	ko00000,ko00001,ko00002,ko01000				Bacteria	1TQ4A@1239,3F3NA@33958,4HAAH@91061,COG0351@1,COG0351@2	NA|NA|NA	H	Phosphomethylpyrimidine kinase
PAKBJLMI_01499	272621.LBA1880	3.3e-57	227.6	Lactobacillaceae													Bacteria	1VZPI@1239,3F82Y@33958,4HYUI@91061,COG5294@1,COG5294@2	NA|NA|NA	S	Protein conserved in bacteria
PAKBJLMI_01500	272621.LBA1881	2.2e-170	604.7	Lactobacillaceae				ko:K07496					ko00000				Bacteria	1TRNY@1239,3F55P@33958,4HBKP@91061,COG0675@1,COG0675@2	NA|NA|NA	L	transposase, IS605 OrfB family
PAKBJLMI_01501	272621.LBA1882	7.6e-134	483.0	Lactobacillaceae	cobQ			ko:K07009					ko00000				Bacteria	1U7I9@1239,3F4CH@33958,4HD1P@91061,COG3442@1,COG3442@2	NA|NA|NA	S	glutamine amidotransferase
PAKBJLMI_01502	272621.LBA1883	9.5e-83	312.8	Lactobacillaceae													Bacteria	1V9ZW@1239,3FC1P@33958,4HZ6Z@91061,COG0791@1,COG0791@2	NA|NA|NA	M	NlpC/P60 family
PAKBJLMI_01503	272621.LBA1884	1.6e-166	592.0	Lactobacillaceae													Bacteria	1TRTP@1239,3FBJS@33958,4HB3F@91061,COG0697@1,COG0697@2	NA|NA|NA	EG	EamA-like transporter family
PAKBJLMI_01504	272621.LBA1885	3.2e-167	594.3	Lactobacillaceae													Bacteria	1TRTP@1239,3FBJS@33958,4HB3F@91061,COG0697@1,COG0697@2	NA|NA|NA	EG	EamA-like transporter family
PAKBJLMI_01505	272621.LBA1887	1.6e-163	582.0	Lactobacillaceae	yicL												Bacteria	1TR6G@1239,3F5NA@33958,4HAMD@91061,COG0697@1,COG0697@2	NA|NA|NA	EG	EamA-like transporter family
PAKBJLMI_01506	272621.LBA1889	3.1e-105	387.9	Lactobacillaceae													Bacteria	1U5BC@1239,29NPC@1,309M9@2,3F5FH@33958,4IF2P@91061	NA|NA|NA		
PAKBJLMI_01507	272621.LBA1890	1.5e-56	225.3	Lactobacillaceae													Bacteria	1U5UZ@1239,29NYM@1,309WQ@2,3F6IU@33958,4IFIM@91061	NA|NA|NA		
PAKBJLMI_01508	272621.LBA1891	1.6e-246	858.2	Lactobacillaceae	purB	GO:0003674,GO:0003824,GO:0004018,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016829,GO:0016840,GO:0016842,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046033,GO:0046390,GO:0046483,GO:0055086,GO:0070626,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	4.3.2.2	ko:K01756	ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130	M00048,M00049	R01083,R04559	RC00379,RC00444,RC00445	ko00000,ko00001,ko00002,ko01000			iLJ478.TM1095	Bacteria	1TPMM@1239,3F48P@33958,4HACW@91061,COG0015@1,COG0015@2	NA|NA|NA	F	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
PAKBJLMI_01509	272621.LBA1892	3.2e-250	870.5	Lactobacillaceae	purA	GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046033,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	6.3.4.4	ko:K01939	ko00230,ko00250,ko01100,map00230,map00250,map01100	M00049	R01135	RC00458,RC00459	ko00000,ko00001,ko00002,ko01000				Bacteria	1TQ4C@1239,3F3RQ@33958,4H9YT@91061,COG0104@1,COG0104@2	NA|NA|NA	F	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
PAKBJLMI_01510	272621.LBA1893	2e-188	664.8	Lactobacillaceae	guaC		1.1.1.205,1.7.1.7	ko:K00088,ko:K00364	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	M00050	R01130,R01134,R08240	RC00143,RC00457,RC02207	ko00000,ko00001,ko00002,ko01000,ko04147			iSB619.SA_RS06660	Bacteria	1TNYF@1239,3F45K@33958,4HA55@91061,COG0516@1,COG0516@2	NA|NA|NA	F	Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
PAKBJLMI_01513	272621.LBA1895	1.5e-202	711.8	Lactobacillaceae			4.2.1.126	ko:K07106,ko:K09963	ko00520,ko01100,map00520,map01100		R08555	RC00397,RC00746	ko00000,ko00001,ko01000				Bacteria	1TRIY@1239,3FB4D@33958,4HAHJ@91061,COG3589@1,COG3589@2	NA|NA|NA	S	Bacterial protein of unknown function (DUF871)
PAKBJLMI_01514	272621.LBA1896	3e-195	687.6	Lactobacillaceae	asnA	GO:0003674,GO:0003824,GO:0004071,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006528,GO:0006529,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009987,GO:0016053,GO:0016211,GO:0016874,GO:0016879,GO:0016880,GO:0019752,GO:0032787,GO:0033554,GO:0034641,GO:0042802,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0050896,GO:0051716,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607	6.3.1.1	ko:K01914	ko00250,ko00460,ko01100,ko01110,ko01230,map00250,map00460,map01100,map01110,map01230		R00483	RC00010	ko00000,ko00001,ko01000			iAPECO1_1312.APECO1_2719,iECOK1_1307.ECOK1_4193,iECS88_1305.ECS88_4166,iUMN146_1321.UM146_18910,iUTI89_1310.UTI89_C4299	Bacteria	1TP28@1239,3F40A@33958,4HAEC@91061,COG2502@1,COG2502@2	NA|NA|NA	F	aspartate--ammonia ligase
PAKBJLMI_01515	272621.LBA1897	1.1e-118	432.6	Lactobacillaceae	frnE												Bacteria	1TZ1N@1239,3F5IF@33958,4HEBF@91061,COG2761@1,COG2761@2	NA|NA|NA	Q	DSBA-like thioredoxin domain
PAKBJLMI_01516	272621.LBA1898	1.3e-176	625.5	Lactobacillaceae	trxB		1.8.1.9	ko:K00384	ko00450,map00450		R02016,R03596,R09372	RC00013,RC02518,RC02873	ko00000,ko00001,ko01000				Bacteria	1TNZS@1239,3F411@33958,4HA4N@91061,COG0492@1,COG0492@2	NA|NA|NA	C	Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
PAKBJLMI_01517	272621.LBA1899	3.6e-117	427.6	Lactobacillaceae	M1-798			ko:K03892					ko00000,ko03000				Bacteria	1V2NW@1239,3F6DW@33958,4HGAA@91061,COG0607@1,COG0607@2,COG0640@1,COG0640@2	NA|NA|NA	K	Rhodanese Homology Domain
PAKBJLMI_01519	272621.LBA1901	1.1e-52	212.2	Lactobacillaceae	yusE												Bacteria	1U6PP@1239,3F89E@33958,4IGGN@91061,COG0526@1,COG0526@2	NA|NA|NA	CO	Thioredoxin
PAKBJLMI_01520	272621.LBA1902	1.7e-241	841.6	Lactobacillaceae	steT_1												Bacteria	1UZNT@1239,3F3SX@33958,4HFMI@91061,COG0531@1,COG0531@2	NA|NA|NA	E	amino acid
PAKBJLMI_01521	272621.LBA1903	8e-142	509.6	Lactobacillaceae	puuD			ko:K07010					ko00000,ko01002				Bacteria	1V1KC@1239,3F4PK@33958,4HI59@91061,COG2071@1,COG2071@2	NA|NA|NA	S	peptidase C26
PAKBJLMI_01522	272621.LBA1904	3.6e-220	770.8	Lactobacillaceae	yifK	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944		ko:K03293					ko00000	2.A.3.1			Bacteria	1TP97@1239,3F3YD@33958,4H9QX@91061,COG1113@1,COG1113@2	NA|NA|NA	E	Amino acid permease
PAKBJLMI_01523	272621.LBA1905	3.2e-205	721.1	Lactobacillaceae	cycA	GO:0001761,GO:0001762,GO:0003333,GO:0003674,GO:0005215,GO:0005326,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0006836,GO:0006855,GO:0006865,GO:0008150,GO:0008324,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015175,GO:0015179,GO:0015180,GO:0015187,GO:0015238,GO:0015318,GO:0015711,GO:0015804,GO:0015807,GO:0015808,GO:0015816,GO:0015849,GO:0015893,GO:0016020,GO:0022857,GO:0022858,GO:0022889,GO:0032328,GO:0032329,GO:0034220,GO:0042221,GO:0042493,GO:0042891,GO:0042895,GO:0042940,GO:0042941,GO:0042942,GO:0042943,GO:0042944,GO:0042945,GO:0044464,GO:0046942,GO:0046943,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098655,GO:0098656,GO:1902475,GO:1903825,GO:1905039		ko:K03293,ko:K11737					ko00000,ko02000	2.A.3.1,2.A.3.1.7		iECO111_1330.ECO111_5093,iECO26_1355.ECO26_5376,iEcHS_1320.EcHS_A4458,iSbBS512_1146.SbBS512_E4749,iYL1228.KPN_04601	Bacteria	1TP97@1239,3F3YD@33958,4H9QX@91061,COG1113@1,COG1113@2	NA|NA|NA	E	Amino acid permease
PAKBJLMI_01524	272621.LBA1906	7.1e-122	443.4	Lactobacillaceae													Bacteria	1UGDF@1239,29V9A@1,30GPA@2,3F5SI@33958,4IF6B@91061	NA|NA|NA		
PAKBJLMI_01525	272621.LBA0077	0.0	1114.8	Lactobacillaceae													Bacteria	1TQQ9@1239,3F4M8@33958,4H9KK@91061,COG3666@1,COG3666@2	NA|NA|NA	L	Transposase
PAKBJLMI_01526	272621.LBA1909	6.6e-116	423.3	Lactobacillaceae	lepB		3.4.21.89	ko:K03100	ko02024,ko03060,map02024,map03060				ko00000,ko00001,ko01000,ko01002				Bacteria	1TRAV@1239,3FBKX@33958,4HCTU@91061,COG0681@1,COG0681@2	NA|NA|NA	U	Belongs to the peptidase S26 family
PAKBJLMI_01527	272621.LBA1910	0.0	1333.5	Lactobacillaceae	clpE			ko:K03697					ko00000,ko03110				Bacteria	1TPMU@1239,3F5GX@33958,4HA0V@91061,COG0542@1,COG0542@2	NA|NA|NA	O	AAA domain (Cdc48 subfamily)
PAKBJLMI_01528	272621.LBA1911	5.1e-170	603.6	Lactobacillaceae													Bacteria	1V8NG@1239,3F41V@33958,4HJ22@91061,COG4814@1,COG4814@2	NA|NA|NA	S	Alpha/beta hydrolase of unknown function (DUF915)
PAKBJLMI_01529	272621.LBA1912	1.4e-229	802.0	Lactobacillaceae	pts13C			ko:K02761	ko00500,ko02060,map00500,map02060	M00275	R11170,R11172	RC00017,RC03206	ko00000,ko00001,ko00002,ko02000	4.A.3.2			Bacteria	1V5SI@1239,3F3Z5@33958,4HJTK@91061,COG1455@1,COG1455@2	NA|NA|NA	G	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PAKBJLMI_01530	272621.LBA1913	5e-125	453.8	Lactobacillaceae	XK27_06785			ko:K02003,ko:K02004		M00258			ko00000,ko00002,ko02000	3.A.1			Bacteria	1TQC9@1239,3F3YU@33958,4HB8D@91061,COG1136@1,COG1136@2	NA|NA|NA	V	ABC transporter, ATP-binding protein
PAKBJLMI_01531	272621.LBA1914	0.0	1614.7	Lactobacillaceae	XK27_06780			ko:K02004		M00258			ko00000,ko00002,ko02000	3.A.1			Bacteria	1TPHU@1239,3F4HF@33958,4HA2C@91061,COG0577@1,COG0577@2	NA|NA|NA	V	ABC transporter permease
PAKBJLMI_01532	272621.LBA1915	9.6e-36	155.6	Lactobacillaceae													Bacteria	1U6A1@1239,2C9N2@1,30A73@2,3F7ES@33958,4IG19@91061	NA|NA|NA		
PAKBJLMI_01533	272621.LBA1917	2.2e-288	997.7	Lactobacillaceae	ytgP	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944		ko:K03328,ko:K06409					ko00000,ko02000	2.A.66.2,2.A.66.2.14			Bacteria	1TNYX@1239,3F404@33958,4H9RY@91061,COG2244@1,COG2244@2	NA|NA|NA	S	Polysaccharide biosynthesis protein
PAKBJLMI_01534	272621.LBA1918	4.3e-167	594.0	Lactobacillaceae	lysA2			ko:K07273					ko00000				Bacteria	1VF8D@1239,3F4U9@33958,4HX0U@91061,COG3757@1,COG3757@2	NA|NA|NA	M	Glycosyl hydrolases family 25
PAKBJLMI_01535	272621.LBA1919	4.4e-126	457.2	Lactobacillaceae													Bacteria	1V6FC@1239,3FBKG@33958,4HPG8@91061,COG5523@1,COG5523@2	NA|NA|NA	S	Protein of unknown function (DUF975)
PAKBJLMI_01536	272621.LBA1921	2.7e-61	241.1	Lactobacillaceae													Bacteria	1U737@1239,29PVC@1,30ATK@2,3F8X4@33958,4IGXS@91061	NA|NA|NA		
PAKBJLMI_01537	272621.LBA1922	2e-177	628.2	Lactobacillaceae	pbpX2			ko:K03740	ko01503,ko02020,ko05150,map01503,map02020,map05150	M00725			ko00000,ko00001,ko00002,ko01504				Bacteria	1V0GX@1239,3F4TH@33958,4HCXH@91061,COG1680@1,COG1680@2	NA|NA|NA	V	Beta-lactamase
PAKBJLMI_01538	272621.LBA1923	3.9e-248	863.6	Lactobacillaceae	dltD			ko:K03740	ko01503,ko02020,ko05150,map01503,map02020,map05150	M00725			ko00000,ko00001,ko00002,ko01504				Bacteria	1TSZU@1239,3F3WE@33958,4HC3H@91061,COG3966@1,COG3966@2	NA|NA|NA	M	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
PAKBJLMI_01539	272621.LBA1924	7.4e-36	156.0	Lactobacillaceae	dltC	GO:0000270,GO:0003674,GO:0005215,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0006810,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0022857,GO:0030203,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0051179,GO:0051234,GO:0055085,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576	6.1.1.13	ko:K02078,ko:K14188	ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150	M00725	R02718	RC00037,RC00094	ko00000,ko00001,ko00002,ko01000,ko01504				Bacteria	1VFQI@1239,3F7Q1@33958,4HNIH@91061,COG0236@1,COG0236@2	NA|NA|NA	J	Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PAKBJLMI_01540	272621.LBA1925	2.6e-241	840.9	Lactobacillaceae	dltB			ko:K03739	ko01503,ko02020,ko05150,map01503,map02020,map05150	M00725			ko00000,ko00001,ko00002,ko01504				Bacteria	1TP52@1239,3F4KK@33958,4HBQG@91061,COG1696@1,COG1696@2	NA|NA|NA	M	MBOAT, membrane-bound O-acyltransferase family
PAKBJLMI_01541	272621.LBA1926	2e-296	1024.2	Lactobacillaceae	dltA		6.1.1.13	ko:K03367	ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150	M00725	R02718	RC00037,RC00094	ko00000,ko00001,ko00002,ko01000,ko01504				Bacteria	1TPTH@1239,3F49R@33958,4HAHU@91061,COG1020@1,COG1020@2	NA|NA|NA	H	Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PAKBJLMI_01542	525365.HMPREF0548_1419	7.6e-18	95.5	Lactobacillaceae													Bacteria	1U6IK@1239,2DKQV@1,30ADX@2,3F7ZM@33958,4IGAZ@91061	NA|NA|NA	S	D-Ala-teichoic acid biosynthesis protein
PAKBJLMI_01543	891391.LAC30SC_10400	3.6e-40	170.6	Lactobacillaceae													Bacteria	1U67F@1239,29P6X@1,30A50@2,3F78Y@33958,4IFXY@91061	NA|NA|NA		
PAKBJLMI_01544	272621.LBA1927	9.1e-217	759.2	Lactobacillaceae	ywhK												Bacteria	1V841@1239,3F50M@33958,4HITC@91061,COG3391@1,COG3391@2	NA|NA|NA	S	Membrane
PAKBJLMI_01545	272621.LBA1928	2.1e-82	311.6	Lactobacillaceae	ykuL												Bacteria	1V9HN@1239,3F678@33958,4HH3X@91061,COG0517@1,COG0517@2	NA|NA|NA	S	(CBS) domain
PAKBJLMI_01546	272621.LBA1929	0.0	1151.3	Lactobacillaceae	cadA												Bacteria	1TQ07@1239,3F4JI@33958,4H9SP@91061,COG2217@1,COG2217@2	NA|NA|NA	P	P-type ATPase
PAKBJLMI_01547	272621.LBA1931	5e-194	683.7	Lactobacillaceae	napA	GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006812,GO:0006814,GO:0008150,GO:0008324,GO:0009847,GO:0015075,GO:0015077,GO:0015081,GO:0015291,GO:0015297,GO:0015318,GO:0015672,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0022890,GO:0030001,GO:0031224,GO:0032502,GO:0034220,GO:0035725,GO:0044425,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0098655,GO:0098660,GO:0098662											Bacteria	1TS32@1239,3FCEG@33958,4HP0X@91061,COG0475@1,COG0475@2	NA|NA|NA	P	Sodium/hydrogen exchanger family
PAKBJLMI_01548	272621.LBA1932	3.5e-72	278.1	Lactobacillaceae													Bacteria	1VKFR@1239,3F701@33958,4HKWD@91061,COG3595@1,COG3595@2	NA|NA|NA	S	Putative adhesin
PAKBJLMI_01549	272621.LBA1933	4.3e-286	989.9	Lactobacillaceae				ko:K06147,ko:K06148					ko00000,ko02000	3.A.1,3.A.1.106,3.A.1.109,3.A.1.21			Bacteria	1TSRV@1239,3F3JJ@33958,4HIAU@91061,COG1132@1,COG1132@2	NA|NA|NA	V	ABC transporter transmembrane region
PAKBJLMI_01550	272621.LBA1934	2.8e-154	551.2	Lactobacillaceae	mutR			ko:K20375	ko02024,map02024				ko00000,ko00001,ko03000				Bacteria	1U54X@1239,3F4P7@33958,4IEW2@91061,COG1396@1,COG1396@2	NA|NA|NA	K	Helix-turn-helix XRE-family like proteins
PAKBJLMI_01551	272621.LBA1935	3.2e-97	360.9	Lactobacillaceae													Bacteria	1VW67@1239,3F41W@33958,4HWSY@91061,COG0791@1,COG0791@2	NA|NA|NA	M	CHAP domain
PAKBJLMI_01552	272621.LBA1936	1.5e-68	265.4	Bacilli													Bacteria	1UHWD@1239,4IT3J@91061,COG1476@1,COG1476@2	NA|NA|NA	K	Helix-turn-helix XRE-family like proteins
PAKBJLMI_01553	272621.LBA1937	2.7e-120	438.0	Lactobacillaceae				ko:K07052					ko00000				Bacteria	1VFRX@1239,3F4Q0@33958,4HRQQ@91061,COG1266@1,COG1266@2	NA|NA|NA	S	CAAX protease self-immunity
PAKBJLMI_01554	272621.LBA1938	1.6e-194	685.3	Lactobacillaceae													Bacteria	1V8H4@1239,3FC81@33958,4HI4B@91061,COG1434@1,COG1434@2	NA|NA|NA	S	DUF218 domain
PAKBJLMI_01555	272621.LBA1939	0.0	1479.5	Lactobacillaceae	macB_3			ko:K02003,ko:K02004,ko:K05685	ko02010,map02010	M00258,M00709			ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1,3.A.1.122.1,3.A.1.122.12			Bacteria	1TPBJ@1239,3F44P@33958,4HBK7@91061,COG0577@1,COG0577@2,COG1136@1,COG1136@2	NA|NA|NA	V	ABC transporter, ATP-binding protein
PAKBJLMI_01556	272621.LBA1940	1.6e-103	382.1	Lactobacillaceae													Bacteria	1V2ZW@1239,3FBM9@33958,4IR4I@91061,COG4684@1,COG4684@2	NA|NA|NA	S	ECF transporter, substrate-specific component
PAKBJLMI_01557	272621.LBA1942	5.6e-186	656.8	Lactobacillaceae	tcsA			ko:K02058,ko:K07335		M00221			ko00000,ko00002,ko02000	3.A.1.2			Bacteria	1TPEU@1239,3F5R3@33958,4HANH@91061,COG1744@1,COG1744@2	NA|NA|NA	S	ABC transporter substrate-binding protein PnrA-like
PAKBJLMI_01558	272621.LBA1943	5.6e-200	703.4	Lactobacillaceae	tcsA			ko:K02058,ko:K07335		M00221			ko00000,ko00002,ko02000	3.A.1.2			Bacteria	1TPEU@1239,3F3MZ@33958,4HANH@91061,COG1744@1,COG1744@2	NA|NA|NA	S	ABC transporter substrate-binding protein PnrA-like
PAKBJLMI_01559	272621.LBA1944	1.7e-287	994.6	Lactobacillaceae	xylG		3.6.3.17	ko:K02056,ko:K06400		M00221			ko00000,ko00002,ko01000,ko02000	3.A.1.2			Bacteria	1UYQA@1239,3F50N@33958,4HVSH@91061,COG3845@1,COG3845@2	NA|NA|NA	S	ABC transporter
PAKBJLMI_01560	272621.LBA1945	5.1e-207	726.9	Lactobacillaceae	yufP	GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008150,GO:0008643,GO:0015144,GO:0015145,GO:0015749,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0034219,GO:0044425,GO:0044464,GO:0051119,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944		ko:K02057		M00221			ko00000,ko00002,ko02000	3.A.1.2			Bacteria	1TP1F@1239,3F59X@33958,4H9VE@91061,COG4603@1,COG4603@2	NA|NA|NA	S	Belongs to the binding-protein-dependent transport system permease family
PAKBJLMI_01561	272621.LBA1946	2.4e-170	604.7	Lactobacillaceae	yufQ			ko:K02057		M00221			ko00000,ko00002,ko02000	3.A.1.2			Bacteria	1TP8Y@1239,3F4AJ@33958,4HAX4@91061,COG1079@1,COG1079@2	NA|NA|NA	S	Belongs to the binding-protein-dependent transport system permease family
PAKBJLMI_01562	272621.LBA1947	1.7e-159	568.5	Lactobacillaceae	yeaE												Bacteria	1TPM1@1239,3FB4R@33958,4HU74@91061,COG0656@1,COG0656@2	NA|NA|NA	S	Aldo/keto reductase family
PAKBJLMI_01563	272621.LBA1948	2.5e-135	488.0	Lactobacillaceae	nagB	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006040,GO:0008150,GO:0008152,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:1901135	3.1.1.31,3.5.99.6	ko:K01057,ko:K02564	ko00030,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00520,map01100,map01110,map01120,map01130,map01200	M00004,M00006,M00008	R00765,R02035	RC00163,RC00537	ko00000,ko00001,ko00002,ko01000				Bacteria	1TP10@1239,3F3NR@33958,4HAG4@91061,COG0363@1,COG0363@2	NA|NA|NA	G	Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
PAKBJLMI_01564	272621.LBA1949	4.7e-117	427.2	Lactobacillaceae	dak		2.7.1.74,2.7.1.76	ko:K00893,ko:K10353	ko00230,ko00240,ko01100,map00230,map00240,map01100		R00185,R01666,R02089	RC00002,RC00017	ko00000,ko00001,ko01000				Bacteria	1TPJ1@1239,3F488@33958,4HA9N@91061,COG1428@1,COG1428@2	NA|NA|NA	F	deoxynucleoside kinase
PAKBJLMI_01565	272621.LBA1950	1.4e-127	462.2	Lactobacillaceae	dgk		2.7.1.74,2.7.1.76	ko:K00893,ko:K10353	ko00230,ko00240,ko01100,map00230,map00240,map01100		R00185,R01666,R02089	RC00002,RC00017	ko00000,ko00001,ko01000				Bacteria	1TPJ1@1239,3F488@33958,4HA9N@91061,COG1428@1,COG1428@2	NA|NA|NA	F	deoxynucleoside kinase
PAKBJLMI_01566	272621.LBA1951	8.5e-145	519.6	Lactobacillaceae	cof												Bacteria	1TSGF@1239,3F57T@33958,4HHWU@91061,COG0561@1,COG0561@2	NA|NA|NA	S	haloacid dehalogenase-like hydrolase
PAKBJLMI_01567	272621.LBA1952	1.1e-231	808.9	Lactobacillaceae	pbuG			ko:K06901					ko00000,ko02000	2.A.1.40			Bacteria	1TQC6@1239,3F44D@33958,4HANG@91061,COG2252@1,COG2252@2	NA|NA|NA	S	permease
PAKBJLMI_01568	272621.LBA0614	1.2e-241	842.0	Lactobacillaceae				ko:K07497					ko00000				Bacteria	1TQQY@1239,3FCFA@33958,4HC8M@91061,COG2801@1,COG2801@2	NA|NA|NA	L	COG2963 Transposase and inactivated derivatives
PAKBJLMI_01569	272621.LBA1955	3.5e-58	230.7	Lactobacillaceae													Bacteria	1V05W@1239,3F4R7@33958,4HSX6@91061,COG0789@1,COG0789@2	NA|NA|NA	K	helix_turn_helix, mercury resistance
PAKBJLMI_01570	272621.LBA1955	6.3e-45	186.4	Lactobacillaceae													Bacteria	1V05W@1239,3F4R7@33958,4HSX6@91061,COG0789@1,COG0789@2	NA|NA|NA	K	helix_turn_helix, mercury resistance
PAKBJLMI_01571	97137.C821_00294	5e-227	793.5	Lactobacillaceae	pbuG			ko:K06901					ko00000,ko02000	2.A.1.40			Bacteria	1TQC6@1239,3F44D@33958,4HANG@91061,COG2252@1,COG2252@2	NA|NA|NA	S	permease
PAKBJLMI_01572	272621.LBA1957	5.6e-177	626.7	Lactobacillaceae	pepL		3.4.11.5	ko:K01259	ko00330,map00330		R00135		ko00000,ko00001,ko01000,ko01002				Bacteria	1U46W@1239,3F5ZW@33958,4IDY6@91061,COG2267@1,COG2267@2	NA|NA|NA	E	Releases the N-terminal proline from various substrates
PAKBJLMI_01573	272621.LBA1958	2e-132	478.4	Lactobacillaceae	oppA2			ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	M00239,M00439			ko00000,ko00001,ko00002,ko02000	3.A.1.5,3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25			Bacteria	1TNYQ@1239,3F4TA@33958,4HAMK@91061,COG4166@1,COG4166@2	NA|NA|NA	E	Bacterial extracellular solute-binding proteins, family 5 Middle
PAKBJLMI_01574	272621.LBA1958	3.4e-166	590.9	Lactobacillaceae	oppA2			ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	M00239,M00439			ko00000,ko00001,ko00002,ko02000	3.A.1.5,3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25			Bacteria	1TNYQ@1239,3F4TA@33958,4HAMK@91061,COG4166@1,COG4166@2	NA|NA|NA	E	Bacterial extracellular solute-binding proteins, family 5 Middle
PAKBJLMI_01575	525365.HMPREF0548_1383	3.4e-223	780.8	Lactobacillaceae	pbuG			ko:K06901					ko00000,ko02000	2.A.1.40			Bacteria	1TQC6@1239,3F44D@33958,4HANG@91061,COG2252@1,COG2252@2	NA|NA|NA	S	permease
PAKBJLMI_01576	525365.HMPREF0548_1381	1.2e-23	115.5	Lactobacillaceae													Bacteria	1U6NN@1239,29PJ2@1,30AH7@2,3F87H@33958,4IGFM@91061	NA|NA|NA		
PAKBJLMI_01577	272621.LBA1961	3.8e-309	1066.6	Lactobacillaceae				ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	M00239,M00439			ko00000,ko00001,ko00002,ko02000	3.A.1.5,3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25			Bacteria	1TNYQ@1239,3F3JE@33958,4HAMK@91061,COG4166@1,COG4166@2	NA|NA|NA	E	ABC transporter, substratebinding protein
PAKBJLMI_01578	272621.LBA1963	3.9e-75	287.3	Lactobacillaceae	atkY												Bacteria	1V7EY@1239,3FBNQ@33958,4HP8S@91061,COG3682@1,COG3682@2	NA|NA|NA	K	Penicillinase repressor
PAKBJLMI_01579	272621.LBA1964	1.8e-65	255.0	Lactobacillaceae	silP		1.9.3.1,3.6.3.54	ko:K02275,ko:K17686	ko00190,ko01100,ko01524,ko04016,map00190,map01100,map01524,map04016	M00155	R00081,R00086	RC00002,RC00016	ko00000,ko00001,ko00002,ko01000	3.A.3.5,3.D.4.2,3.D.4.4,3.D.4.6			Bacteria	1TQ02@1239,3FBQA@33958,4IRVT@91061,COG4633@1,COG4633@2	NA|NA|NA	S	Cupredoxin-like domain
PAKBJLMI_01580	272621.LBA1965	3.7e-50	203.8	Lactobacillaceae	silP		1.9.3.1,3.6.3.54	ko:K02275,ko:K17686	ko00190,ko01100,ko01524,ko04016,map00190,map01100,map01524,map04016	M00155	R00081,R00086	RC00002,RC00016	ko00000,ko00001,ko00002,ko01000	3.A.3.5,3.D.4.2,3.D.4.4,3.D.4.6			Bacteria	1U632@1239,3F6XB@33958,4IFSB@91061,COG4633@1,COG4633@2	NA|NA|NA	S	Cupredoxin-like domain
PAKBJLMI_01581	272621.LBA1966	0.0	1183.3	Lactobacillaceae	copA		3.6.3.54	ko:K17686	ko01524,ko04016,map01524,map04016		R00086	RC00002	ko00000,ko00001,ko01000	3.A.3.5			Bacteria	1TP5S@1239,3F4IX@33958,4HAI0@91061,COG2217@1,COG2217@2	NA|NA|NA	P	P-type ATPase
PAKBJLMI_01582	272621.LBA1967	2.7e-175	621.3	Lactobacillaceae	XK27_05540												Bacteria	1UR34@1239,3F4J5@33958,4HDF2@91061,COG1434@1,COG1434@2	NA|NA|NA	S	DUF218 domain
PAKBJLMI_01583	272621.LBA1968	2.4e-130	471.5	Lactobacillaceae	WQ51_05710												Bacteria	1TPN2@1239,3FB8N@33958,4H9P0@91061,COG2013@1,COG2013@2	NA|NA|NA	S	Mitochondrial biogenesis AIM24
PAKBJLMI_01584	272621.LBA1969	5.5e-118	430.3	Lactobacillaceae	flpA		4.1.99.16,4.2.3.22,4.2.3.75	ko:K10187,ko:K21562	ko00909,ko01100,ko01110,map00909,map01100,map01110		R07647,R07648,R08543,R09487	RC01832,RC02159,RC02160,RC02183,RC02425,RC02552	ko00000,ko00001,ko01000,ko03000				Bacteria	1TVBM@1239,3F4PI@33958,4HEJG@91061,COG0664@1,COG0664@2	NA|NA|NA	K	helix_turn_helix, cAMP Regulatory protein
PAKBJLMI_01585	272621.LBA1971	1.2e-213	748.8	Lactobacillaceae													Bacteria	1U547@1239,29NJT@1,309HR@2,3F4IW@33958,4IEVJ@91061	NA|NA|NA		
PAKBJLMI_01586	272621.LBA1972	1.1e-281	975.3	Lactobacillaceae	clcA	GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0006821,GO:0008150,GO:0008324,GO:0015075,GO:0015077,GO:0015078,GO:0015291,GO:0015297,GO:0015298,GO:0015299,GO:0015318,GO:0015672,GO:0015698,GO:0015706,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0022890,GO:0031224,GO:0031226,GO:0031404,GO:0034220,GO:0042802,GO:0043167,GO:0043168,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071705,GO:0071944,GO:0098655,GO:0098660,GO:0098662,GO:1902600		ko:K03281,ko:K03499					ko00000,ko02000	2.A.38.1,2.A.38.4,2.A.49		iAF1260.b0155,iB21_1397.B21_00153,iBWG_1329.BWG_0148,iE2348C_1286.E2348C_0162,iEC042_1314.EC042_0155,iEC55989_1330.EC55989_0149,iECBD_1354.ECBD_3463,iECDH10B_1368.ECDH10B_0135,iECDH1ME8569_1439.ECDH1ME8569_0149,iECD_1391.ECD_00154,iECIAI1_1343.ECIAI1_0153,iECO103_1326.ECO103_0155,iECSE_1348.ECSE_0156,iECUMN_1333.ECUMN_0152,iECW_1372.ECW_m0152,iEKO11_1354.EKO11_3761,iETEC_1333.ETEC_0151,iEcDH1_1363.EcDH1_3447,iEcE24377_1341.EcE24377A_0160,iEcolC_1368.EcolC_3504,iJO1366.b0155,iSSON_1240.SSON_0167,iUMNK88_1353.UMNK88_159,iWFL_1372.ECW_m0152,iY75_1357.Y75_RS00790,iZ_1308.Z0166	Bacteria	1TPX0@1239,3F3MU@33958,4HD2H@91061,COG0038@1,COG0038@2,COG0569@1,COG0569@2	NA|NA|NA	P	chloride
PAKBJLMI_01587	272621.LBA1973	5.8e-274	949.5	Lactobacillaceae	gnd		1.1.1.343,1.1.1.44	ko:K00033	ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200	M00004,M00006	R01528,R10221	RC00001,RC00539	ko00000,ko00001,ko00002,ko01000				Bacteria	1TP4I@1239,3F3S8@33958,4H9NC@91061,COG0362@1,COG0362@2	NA|NA|NA	H	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
PAKBJLMI_01588	272621.LBA1974	0.0	1226.8	Lactobacillaceae	poxB		1.2.3.3,1.2.5.1	ko:K00156,ko:K00158	ko00620,ko01100,map00620,map01100		R00207,R03145	RC00860,RC02745	ko00000,ko00001,ko01000				Bacteria	1TQE8@1239,3F3R9@33958,4HBUS@91061,COG0028@1,COG0028@2	NA|NA|NA	EH	Belongs to the TPP enzyme family
PAKBJLMI_01589	272621.LBA1975	0.0	1266.9	Lactobacillaceae	gidA	GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009314,GO:0009411,GO:0009416,GO:0009451,GO:0009628,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0050896,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363		ko:K03495			R08701	RC00053,RC00209,RC00870	ko00000,ko03016,ko03036				Bacteria	1TQ4B@1239,3F454@33958,4HA6S@91061,COG0445@1,COG0445@2	NA|NA|NA	D	NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
PAKBJLMI_01590	272621.LBA1976	3.9e-254	883.6	Lactobacillaceae	mnmE	GO:0003674,GO:0005488,GO:0005515,GO:0042802		ko:K03650			R08701	RC00053,RC00209,RC00870	ko00000,ko01000,ko03016				Bacteria	1TPJF@1239,3F3WA@33958,4HA06@91061,COG0486@1,COG0486@2	NA|NA|NA	S	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
PAKBJLMI_01591	272621.LBA1977	5.1e-151	540.4	Lactobacillaceae	yidC			ko:K03217	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335			ko00000,ko00001,ko00002,ko02044,ko03029	2.A.9			Bacteria	1TQ0J@1239,3F3SD@33958,4HB3J@91061,COG0706@1,COG0706@2	NA|NA|NA	U	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PAKBJLMI_01592	272621.LBA1978	3.5e-61	240.7	Lactobacillaceae	rnpA	GO:0000966,GO:0001682,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004526,GO:0004540,GO:0004549,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005655,GO:0005730,GO:0006139,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0030677,GO:0030681,GO:0031123,GO:0031404,GO:0031974,GO:0031981,GO:0032991,GO:0033204,GO:0034414,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0040007,GO:0042301,GO:0042779,GO:0042780,GO:0042781,GO:0043167,GO:0043168,GO:0043170,GO:0043199,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043628,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044452,GO:0044464,GO:0046483,GO:0070013,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0099116,GO:0140098,GO:0140101,GO:1901360,GO:1901363,GO:1901681,GO:1902494,GO:1902555,GO:1905267,GO:1905348,GO:1990904	3.1.26.5	ko:K03536,ko:K08998					ko00000,ko01000,ko03016				Bacteria	1VA78@1239,3F6GS@33958,4HKG6@91061,COG0594@1,COG0594@2	NA|NA|NA	J	RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
PAKBJLMI_01593	1033837.WANG_1471	1.1e-15	88.2	Lactobacillaceae	rpmH	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904		ko:K02914	ko03010,map03010	M00178			br01610,ko00000,ko00001,ko00002,ko03011				Bacteria	1VK90@1239,3F81W@33958,4HR2Z@91061,COG0230@1,COG0230@2	NA|NA|NA	J	Belongs to the bacterial ribosomal protein bL34 family
PAKBJLMI_01594	272621.LBA0001	1.3e-246	858.6	Lactobacillaceae	dnaA	GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0034641,GO:0034645,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576,GO:1990837		ko:K02313	ko02020,ko04112,map02020,map04112				ko00000,ko00001,ko03032,ko03036				Bacteria	1TPV7@1239,3F3YA@33958,4H9MW@91061,COG0593@1,COG0593@2	NA|NA|NA	L	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
PAKBJLMI_01595	272621.LBA0002	3.8e-207	727.2	Lactobacillaceae	dnaN		2.7.7.7	ko:K02338	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400				Bacteria	1TQ7J@1239,3F3ZQ@33958,4H9TF@91061,COG0592@1,COG0592@2	NA|NA|NA	L	Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
PAKBJLMI_01596	272621.LBA0003	5.9e-35	152.9	Lactobacillaceae	yaaA	GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576		ko:K14761					ko00000,ko03009				Bacteria	1VEJ2@1239,3F803@33958,4HNMC@91061,COG2501@1,COG2501@2	NA|NA|NA	S	S4 domain protein YaaA
PAKBJLMI_01597	272621.LBA0004	1.3e-210	738.8	Lactobacillaceae	recF	GO:0000731,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009295,GO:0009987,GO:0018130,GO:0019438,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043590,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:1901360,GO:1901362,GO:1901576		ko:K03629	ko03440,map03440				ko00000,ko00001,ko03400				Bacteria	1TP9U@1239,3F3Q1@33958,4HA0W@91061,COG1195@1,COG1195@2	NA|NA|NA	L	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
PAKBJLMI_01598	272621.LBA0005	0.0	1292.3	Lactobacillaceae	gyrB	GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0003916,GO:0003918,GO:0005488,GO:0005524,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006265,GO:0006725,GO:0006807,GO:0006996,GO:0007059,GO:0008094,GO:0008144,GO:0008150,GO:0008152,GO:0009295,GO:0009987,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016887,GO:0017076,GO:0017111,GO:0030312,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034335,GO:0034641,GO:0035639,GO:0036094,GO:0040007,GO:0042623,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044464,GO:0046483,GO:0046872,GO:0051276,GO:0061505,GO:0071103,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0097159,GO:0097367,GO:0140097,GO:1901265,GO:1901360,GO:1901363	5.99.1.3	ko:K02470,ko:K02622					ko00000,ko01000,ko02048,ko03032,ko03036,ko03400				Bacteria	1TQ0R@1239,3F48M@33958,4H9Y6@91061,COG0187@1,COG0187@2	NA|NA|NA	L	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PAKBJLMI_01599	272621.LBA0006	0.0	1604.7	Lactobacillaceae	gyrA	GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0003916,GO:0003918,GO:0005488,GO:0005524,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006265,GO:0006725,GO:0006807,GO:0006996,GO:0008094,GO:0008144,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016887,GO:0017076,GO:0017111,GO:0030312,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034335,GO:0034641,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044464,GO:0046483,GO:0046872,GO:0051276,GO:0061505,GO:0071103,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0097159,GO:0097367,GO:0140097,GO:1901265,GO:1901360,GO:1901363	5.99.1.3	ko:K02469,ko:K02621					ko00000,ko01000,ko02048,ko03032,ko03036,ko03400				Bacteria	1TP2Z@1239,3F3YM@33958,4HAHY@91061,COG0188@1,COG0188@2	NA|NA|NA	L	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PAKBJLMI_01600	272621.LBA0007	5.5e-49	199.9	Lactobacillaceae	rpsF	GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0019843,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070181,GO:0097159,GO:1901363,GO:1990904		ko:K02990	ko03010,map03010	M00178			br01610,ko00000,ko00001,ko00002,ko03011,ko03029				Bacteria	1VA18@1239,3FCDH@33958,4HP6B@91061,COG0360@1,COG0360@2	NA|NA|NA	J	Binds together with S18 to 16S ribosomal RNA
PAKBJLMI_01601	272621.LBA0008	2e-78	298.5	Lactobacillaceae	ssb			ko:K03111	ko03030,ko03430,ko03440,map03030,map03430,map03440				ko00000,ko00001,ko03029,ko03032,ko03400				Bacteria	1V3WT@1239,3F66N@33958,4HH8I@91061,COG0629@1,COG0629@2	NA|NA|NA	L	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
PAKBJLMI_01602	1423748.BALB01000029_gene1871	1.2e-35	155.2	Lactobacillaceae	rpsR	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0019538,GO:0022626,GO:0022627,GO:0030312,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904		ko:K02963,ko:K03111,ko:K15125	ko03010,ko03030,ko03430,ko03440,ko05133,map03010,map03030,map03430,map03440,map05133	M00178			br01610,ko00000,ko00001,ko00002,ko00536,ko03011,ko03029,ko03032,ko03400				Bacteria	1V9XS@1239,3F7CY@33958,4HKCC@91061,COG0238@1,COG0238@2	NA|NA|NA	J	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
PAKBJLMI_01603	272621.LBA0011	0.0	1286.9	Lactobacillaceae	yybT												Bacteria	1TPGP@1239,3F3TY@33958,4HBVH@91061,COG3887@1,COG3887@2	NA|NA|NA	T	signaling protein consisting of a modified GGDEF domain and a DHH domain
PAKBJLMI_01604	272621.LBA0012	2.1e-71	275.0	Lactobacillaceae	rplI	GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0030312,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0071704,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904		ko:K02939	ko03010,map03010	M00178			br01610,ko00000,ko00001,ko00002,ko03011				Bacteria	1V6QG@1239,3F68P@33958,4HIKJ@91061,COG0359@1,COG0359@2	NA|NA|NA	J	Binds to the 23S rRNA
PAKBJLMI_01605	272621.LBA0013	5.5e-256	889.8	Lactobacillaceae	dnaB	GO:0003674,GO:0003678,GO:0003824,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006268,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0032392,GO:0032508,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051276,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360,GO:1901576	3.6.4.12	ko:K02314	ko03030,ko04112,map03030,map04112				ko00000,ko00001,ko01000,ko03032				Bacteria	1TPCT@1239,3F4MW@33958,4H9Y8@91061,COG0305@1,COG0305@2	NA|NA|NA	L	Participates in initiation and elongation during chromosome replication
PAKBJLMI_01606	272621.LBA0014	1.1e-172	612.5	Lactobacillaceae	phnD			ko:K02044	ko02010,map02010	M00223			ko00000,ko00001,ko00002,ko02000	3.A.1.9			Bacteria	1TR0H@1239,3FB6H@33958,4HBU5@91061,COG3221@1,COG3221@2	NA|NA|NA	P	ABC transporter, phosphonate, periplasmic substrate-binding protein
PAKBJLMI_01607	272621.LBA0015	8.3e-176	622.9	Lactobacillaceae	degV												Bacteria	1V289@1239,3F4D9@33958,4I3AR@91061,COG1307@1,COG1307@2	NA|NA|NA	S	DegV family
PAKBJLMI_01608	272621.LBA0016	1.6e-169	602.1	Lactobacillaceae	scrK		2.7.1.2,2.7.1.4	ko:K00845,ko:K00847	ko00010,ko00051,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00051,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	M00001,M00549	R00299,R00760,R00867,R01600,R01786,R03920	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000				Bacteria	1TQU4@1239,3F3K8@33958,4HA1C@91061,COG1940@1,COG1940@2	NA|NA|NA	GK	ROK family
PAKBJLMI_01609	272621.LBA0017	1e-16	92.0	Lactobacillaceae													Bacteria	1U6JR@1239,29PGN@1,30AET@2,3F81J@33958,4IGC8@91061	NA|NA|NA	S	CsbD-like
PAKBJLMI_01610	272621.LBA0018	1e-30	139.0	Lactobacillaceae													Bacteria	1U7X6@1239,2BNBG@1,32GZ3@2,3FAA7@33958,4IHUJ@91061	NA|NA|NA		
PAKBJLMI_01611	272621.LBA0019	2.6e-238	830.9	Lactobacillaceae													Bacteria	1UHVZ@1239,3F3SU@33958,4ISGG@91061,COG2267@1,COG2267@2	NA|NA|NA	I	Protein of unknown function (DUF2974)
PAKBJLMI_01613	272621.LBA0021	6.7e-97	360.1	Lactobacillaceae	cadD												Bacteria	1V1RM@1239,3F4RK@33958,4HGMR@91061,COG4300@1,COG4300@2	NA|NA|NA	P	Cadmium resistance transporter
PAKBJLMI_01614	272621.LBA0022	1.6e-58	231.9	Lactobacillaceae	cadX			ko:K21903					ko00000,ko03000				Bacteria	1VA6G@1239,3FB50@33958,4HJ09@91061,COG0640@1,COG0640@2	NA|NA|NA	K	helix_turn_helix, Arsenical Resistance Operon Repressor
PAKBJLMI_01615	272621.LBA0023	5e-184	650.2	Lactobacillaceae													Bacteria	1U6ZF@1239,29PS7@1,30AQF@2,3F8RS@33958,4IGTQ@91061	NA|NA|NA		
PAKBJLMI_01616	272621.LBA0024	4.6e-54	216.9	Lactobacillaceae													Bacteria	1U7KH@1239,29Q6T@1,30B5T@2,3F9VB@33958,4IHHJ@91061	NA|NA|NA		
PAKBJLMI_01617	272621.LBA0025	1.1e-206	725.7	Lactobacillaceae													Bacteria	1UZV0@1239,3F46N@33958,4HCE6@91061,COG1674@1,COG1674@2	NA|NA|NA	D	COG1674 DNA segregation ATPase FtsK SpoIIIE and related proteins
PAKBJLMI_01618	272621.LBA0026	8.6e-93	346.3	Lactobacillaceae													Bacteria	1U7DC@1239,29Q2S@1,30B1E@2,3F9F0@33958,4IH98@91061	NA|NA|NA		
PAKBJLMI_01619	1423758.BN55_04395	4.9e-184	650.2	Lactobacillaceae	repB			ko:K02031,ko:K02032,ko:K15269	ko02024,map02024	M00239			ko00000,ko00001,ko00002,ko02000	2.A.7.3.3,3.A.1.5			Bacteria	1V4H8@1239,3F4EP@33958,4HRZY@91061,COG0444@1,COG0444@2	NA|NA|NA	EP	Plasmid replication protein
PAKBJLMI_01620	272621.LBA0028	1.5e-31	141.4	Lactobacillaceae													Bacteria	1U6UK@1239,29PP2@1,30AM8@2,3F8ID@33958,4IGNE@91061	NA|NA|NA		
PAKBJLMI_01621	272621.LBA0029	3.6e-143	514.2	Lactobacillaceae				ko:K03733,ko:K04763					ko00000,ko03036				Bacteria	1U59Y@1239,3F5BK@33958,4IF1G@91061,COG0582@1,COG0582@2	NA|NA|NA	L	Belongs to the 'phage' integrase family
PAKBJLMI_01622	272621.LBA0029	1.3e-78	298.9	Lactobacillaceae				ko:K03733,ko:K04763					ko00000,ko03036				Bacteria	1U59Y@1239,3F5BK@33958,4IF1G@91061,COG0582@1,COG0582@2	NA|NA|NA	L	Belongs to the 'phage' integrase family
PAKBJLMI_01623	272621.LBA0030	1.3e-31	141.7	Lactobacillaceae													Bacteria	1U7ZS@1239,29QEZ@1,30BEA@2,3FAD5@33958,4IHX6@91061	NA|NA|NA		
PAKBJLMI_01624	272621.LBA0031	6.5e-69	266.5	Lactobacillaceae	doc			ko:K07341					ko00000,ko02048				Bacteria	1VCC8@1239,3F7JS@33958,4HKXW@91061,COG3654@1,COG3654@2	NA|NA|NA	S	Fic/DOC family
PAKBJLMI_01625	1423754.BALY01000021_gene900	5.3e-20	103.2	Lactobacillaceae													Bacteria	1U6JV@1239,2DKR4@1,30AEY@2,3F820@33958,4IGCE@91061	NA|NA|NA	S	Protein of unknown function (DUF3923)
PAKBJLMI_01628	272621.LBA0034	3.9e-161	573.9	Lactobacillaceae	aacC		2.3.1.81	ko:K00662					ko00000,ko01000,ko01504				Bacteria	1V2QD@1239,3F635@33958,4HC3S@91061,COG2746@1,COG2746@2	NA|NA|NA	V	Aminoglycoside 3-N-acetyltransferase
PAKBJLMI_01629	272621.LBA0035	2.3e-278	964.1	Lactobacillaceae	pipD			ko:K08659					ko00000,ko01000,ko01002				Bacteria	1TQ0F@1239,3F3M4@33958,4HC3G@91061,COG4690@1,COG4690@2	NA|NA|NA	E	Dipeptidase
PAKBJLMI_01630	272621.LBA0036	1.8e-162	578.6	Lactobacillaceae													Bacteria	1U62D@1239,29P37@1,30A1D@2,3F6V7@33958,4IFRD@91061	NA|NA|NA	S	LPXTG cell wall anchor motif
PAKBJLMI_01631	272621.LBA0036	7e-37	159.5	Lactobacillaceae													Bacteria	1U62D@1239,29P37@1,30A1D@2,3F6V7@33958,4IFRD@91061	NA|NA|NA	S	LPXTG cell wall anchor motif
PAKBJLMI_01632	272621.LBA0037	3.6e-151	540.8	Lactobacillaceae													Bacteria	1V2HX@1239,3F3MV@33958,4HK25@91061,COG4905@1,COG4905@2	NA|NA|NA	S	Putative ABC-transporter type IV
PAKBJLMI_01633	272621.LBA0038	7.7e-100	369.8	Lactobacillaceae	yvqK	GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005525,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009235,GO:0009236,GO:0009987,GO:0016043,GO:0016740,GO:0016765,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019003,GO:0019438,GO:0019538,GO:0022607,GO:0030091,GO:0030554,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032559,GO:0032561,GO:0033013,GO:0033014,GO:0034641,GO:0035639,GO:0036094,GO:0042364,GO:0043167,GO:0043168,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0051186,GO:0051188,GO:0051259,GO:0051260,GO:0065003,GO:0070206,GO:0070207,GO:0071704,GO:0071840,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576	1.2.1.88,1.5.5.2,2.5.1.17	ko:K00798,ko:K13821	ko00250,ko00330,ko00860,ko01100,ko01110,ko01130,map00250,map00330,map00860,map01100,map01110,map01130	M00122	R00245,R00707,R00708,R01253,R01492,R04444,R04445,R05051,R05220,R07268	RC00080,RC00083,RC00216,RC00242,RC00255,RC00533	ko00000,ko00001,ko00002,ko01000,ko03000				Bacteria	1UZ2W@1239,3F6MY@33958,4HF48@91061,COG2096@1,COG2096@2	NA|NA|NA	S	cob(I)alamin adenosyltransferase
PAKBJLMI_01634	272621.LBA0039	4.5e-86	323.9	Lactobacillaceae				ko:K16924,ko:K16927		M00582			ko00000,ko00002,ko02000	3.A.1.29,3.A.1.32			Bacteria	1V5GD@1239,3F5H7@33958,4HI8Y@91061,COG4720@1,COG4720@2	NA|NA|NA	S	ECF transporter, substrate-specific component
PAKBJLMI_01635	525365.HMPREF0548_1313	5.9e-54	216.9	Lactobacillaceae													Bacteria	1VF26@1239,2DNM7@1,32Y2X@2,3F6AM@33958,4HP82@91061	NA|NA|NA	S	Domain of unknown function (DUF4430)
PAKBJLMI_01636	272621.LBA0041	0.0	1532.7	Lactobacillaceae	rtpR		1.1.98.6,1.17.4.1,1.17.4.2	ko:K00525,ko:K00527,ko:K21636	ko00230,ko00240,ko01100,map00230,map00240,map01100	M00053	R02014,R02017,R02018,R02019,R02020,R02022,R02023,R02024,R04315,R11633,R11634,R11635,R11636	RC00013,RC00613	ko00000,ko00001,ko00002,ko01000,ko03400				Bacteria	1TT3U@1239,3F3VU@33958,4HFF1@91061,COG0209@1,COG0209@2	NA|NA|NA	F	ribonucleoside-triphosphate reductase activity
PAKBJLMI_01637	272621.LBA0043	7.1e-176	623.2	Lactobacillaceae													Bacteria	1TSBK@1239,3F46E@33958,4HBYJ@91061,COG0628@1,COG0628@2	NA|NA|NA	K	AI-2E family transporter
PAKBJLMI_01638	272621.LBA0044	3.6e-105	387.5	Lactobacillaceae			3.1.1.5	ko:K10804	ko01040,map01040				ko00000,ko00001,ko01000,ko01004				Bacteria	1VAT2@1239,3F5TI@33958,4HKYJ@91061,COG2755@1,COG2755@2	NA|NA|NA	E	GDSL-like Lipase/Acylhydrolase
PAKBJLMI_01639	585524.HMPREF0493_0145	5.5e-15	86.3	Lactobacillaceae													Bacteria	1U6MU@1239,2AR30@1,31GC3@2,3F85Z@33958,4IGEM@91061	NA|NA|NA		
PAKBJLMI_01640	272621.LBA0045	7.6e-247	859.4	Lactobacillaceae				ko:K16211					ko00000,ko02000	2.A.2.6			Bacteria	1TRP7@1239,3F3YZ@33958,4HCUK@91061,COG2211@1,COG2211@2	NA|NA|NA	G	Major Facilitator
PAKBJLMI_01641	272621.LBA0046	1.7e-52	211.8	Lactobacillaceae													Bacteria	1U644@1239,2BZTJ@1,30A2T@2,3F6ZQ@33958,4IFTP@91061	NA|NA|NA		
PAKBJLMI_01642	272621.LBA0047	2.6e-135	488.0	Lactobacillaceae	XK27_08845			ko:K05833		M00247			ko00000,ko00002,ko02000				Bacteria	1TPAN@1239,3F3NW@33958,4HCHC@91061,COG1101@1,COG1101@2	NA|NA|NA	S	ABC transporter, ATP-binding protein
PAKBJLMI_01643	272621.LBA0048	2.6e-126	458.4	Lactobacillaceae	XK27_08840			ko:K05832		M00247			ko00000,ko00002,ko02000				Bacteria	1TPDJ@1239,3F40J@33958,4HBMY@91061,COG4120@1,COG4120@2	NA|NA|NA	U	Belongs to the binding-protein-dependent transport system permease family
PAKBJLMI_01644	272621.LBA0049	1.5e-178	632.1	Lactobacillaceae	ABC-SBP			ko:K01989,ko:K05832		M00247			ko00000,ko00002,ko02000				Bacteria	1TPB0@1239,3F462@33958,4HESK@91061,COG2984@1,COG2984@2	NA|NA|NA	S	ABC transporter
PAKBJLMI_01645	272621.LBA0050	4e-138	497.3	Lactobacillaceae	yjjG	GO:0003674,GO:0003824,GO:0005488,GO:0006139,GO:0006206,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008252,GO:0008253,GO:0008655,GO:0009058,GO:0009112,GO:0009410,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0018130,GO:0019438,GO:0019856,GO:0019859,GO:0030145,GO:0034641,GO:0034654,GO:0042221,GO:0042578,GO:0043094,GO:0043100,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046112,GO:0046483,GO:0046872,GO:0046914,GO:0050896,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	3.1.3.102,3.1.3.104,3.1.3.5,3.8.1.2	ko:K01560,ko:K07025,ko:K08723,ko:K20862	ko00230,ko00240,ko00361,ko00625,ko00740,ko00760,ko01100,ko01110,ko01120,map00230,map00240,map00361,map00625,map00740,map00760,map01100,map01110,map01120	M00125	R00183,R00511,R00548,R00963,R01126,R01227,R01569,R01664,R01968,R02088,R02102,R02323,R02719,R03346,R05287,R07280	RC00017,RC00697	ko00000,ko00001,ko00002,ko01000			iECNA114_1301.ECNA114_4614	Bacteria	1TS3W@1239,3F4NI@33958,4HADE@91061,COG1011@1,COG1011@2	NA|NA|NA	S	Haloacid dehalogenase-like hydrolase
PAKBJLMI_01646	272621.LBA0051	0.0	1286.9	Lactobacillaceae	tetP			ko:K02355					ko00000,ko03012,ko03029				Bacteria	1TPQH@1239,3F4B4@33958,4HAS9@91061,COG0480@1,COG0480@2	NA|NA|NA	J	elongation factor G
PAKBJLMI_01647	272621.LBA0052	6.2e-151	540.0	Lactobacillaceae			3.1.3.102,3.1.3.104	ko:K20861	ko00740,ko01100,ko01110,map00740,map01100,map01110	M00125	R00548,R07280	RC00017	ko00000,ko00001,ko00002,ko01000				Bacteria	1V2JE@1239,3F3Z7@33958,4HWAW@91061,COG0561@1,COG0561@2	NA|NA|NA	S	hydrolase
PAKBJLMI_01648	272621.LBA0053	6.5e-30	136.0	Lactobacillaceae													Bacteria	1U5BI@1239,3F57I@33958,4HE49@91061,COG3568@1,COG3568@2	NA|NA|NA	S	endonuclease exonuclease phosphatase family protein
PAKBJLMI_01649	272621.LBA0054	2.7e-134	484.6	Lactobacillaceae													Bacteria	1U5BI@1239,3F57I@33958,4HE49@91061,COG3568@1,COG3568@2	NA|NA|NA	S	endonuclease exonuclease phosphatase family protein
PAKBJLMI_01650	585524.HMPREF0493_0156	2.8e-15	87.4	Lactobacillaceae													Bacteria	1U5BI@1239,3F57I@33958,4HE49@91061,COG3568@1,COG3568@2	NA|NA|NA	S	endonuclease exonuclease phosphatase family protein
PAKBJLMI_01651	272621.LBA0055	1.4e-192	678.7	Lactobacillaceae	ldhA		1.1.1.28	ko:K03778	ko00620,ko01120,map00620,map01120		R00704	RC00044	ko00000,ko00001,ko01000				Bacteria	1TSZ6@1239,3FB6C@33958,4HH0S@91061,COG1052@1,COG1052@2	NA|NA|NA	C	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PAKBJLMI_01652	272621.LBA0056	1.8e-153	548.5	Lactobacillaceae	xth	GO:0003674,GO:0003824,GO:0003906,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008296,GO:0008309,GO:0008311,GO:0008408,GO:0009987,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360	3.1.11.2	ko:K01142	ko03410,map03410				ko00000,ko00001,ko01000,ko03400				Bacteria	1TPFB@1239,3F4GK@33958,4HAIU@91061,COG0708@1,COG0708@2	NA|NA|NA	L	exodeoxyribonuclease III
PAKBJLMI_01653	272621.LBA0057	1e-273	948.7	Lactobacillaceae				ko:K20265	ko02024,map02024				ko00000,ko00001,ko02000	2.A.3.7.1,2.A.3.7.3			Bacteria	1TRUM@1239,3F3Y1@33958,4HE3V@91061,COG0531@1,COG0531@2	NA|NA|NA	E	amino acid
PAKBJLMI_01654	272621.LBA0058	5.8e-36	156.4	Lactobacillaceae													Bacteria	1TQ62@1239,3F3YQ@33958,4HAJ1@91061,COG1061@1,COG1061@2,COG3886@1,COG3886@2	NA|NA|NA	L	Helicase C-terminal domain protein
PAKBJLMI_01655	272621.LBA0058	0.0	1637.5	Lactobacillaceae													Bacteria	1TQ62@1239,3F3YQ@33958,4HAJ1@91061,COG1061@1,COG1061@2,COG3886@1,COG3886@2	NA|NA|NA	L	Helicase C-terminal domain protein
PAKBJLMI_01656	272621.LBA0059	2.9e-215	754.2	Lactobacillaceae	pbpX1												Bacteria	1V4BS@1239,3F3QN@33958,4HJRT@91061,COG1680@1,COG1680@2	NA|NA|NA	V	Beta-lactamase
PAKBJLMI_01657	272621.LBA0060	3.2e-71	274.2	Lactobacillaceae	def		3.5.1.31,3.5.1.88	ko:K01450,ko:K01462	ko00270,ko00630,map00270,map00630		R00653	RC00165,RC00323	ko00000,ko00001,ko01000				Bacteria	1V73T@1239,3F6ZA@33958,4HISW@91061,COG0242@1,COG0242@2	NA|NA|NA	J	Removes the formyl group from the N-terminal Met of newly synthesized proteins
PAKBJLMI_01659	525365.HMPREF0548_1840	2.2e-51	208.4	Lactobacillaceae													Bacteria	1V3HS@1239,3F4HP@33958,4IQPW@91061,COG0583@1,COG0583@2	NA|NA|NA	K	LysR substrate binding domain
PAKBJLMI_01660	272621.LBA0062	4.2e-56	223.8	Firmicutes			1.3.5.4	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	M00009,M00011,M00150,M00173	R02164	RC00045	ko00000,ko00001,ko00002,ko01000				Bacteria	1UJ7C@1239,COG3976@1,COG3976@2	NA|NA|NA	S	FMN_bind
PAKBJLMI_01661	272621.LBA0064	2.6e-230	804.3	Lactobacillaceae			1.3.5.4	ko:K00244	ko00020,ko00190,ko00620,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko02020,map00020,map00190,map00620,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map02020	M00009,M00011,M00150,M00173	R02164	RC00045	ko00000,ko00001,ko00002,ko01000				Bacteria	1TPAR@1239,3F53U@33958,4HAXN@91061,COG1053@1,COG1053@2	NA|NA|NA	C	FAD binding domain
PAKBJLMI_01662	272621.LBA0065	5.6e-115	420.2	Lactobacillaceae													Bacteria	1TRVX@1239,3F48I@33958,4HFSV@91061,COG0583@1,COG0583@2	NA|NA|NA	K	Transcriptional regulator, LysR family
PAKBJLMI_01663	272621.LBA0066	1.5e-38	164.9	Lactobacillaceae													Bacteria	1V64Y@1239,3F812@33958,4HNUM@91061,COG4892@1,COG4892@2	NA|NA|NA	S	Cytochrome B5
PAKBJLMI_01664	272621.LBA0067	5e-167	593.6	Lactobacillaceae	arbZ												Bacteria	1V2F4@1239,3F5FU@33958,4IF2T@91061,COG0204@1,COG0204@2	NA|NA|NA	I	Phosphate acyltransferases
PAKBJLMI_01665	272621.LBA0068	8.4e-184	649.4	Lactobacillaceae	arbY	GO:0000271,GO:0003674,GO:0003824,GO:0005975,GO:0005976,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0016051,GO:0016740,GO:0016757,GO:0043170,GO:0044238,GO:0071704,GO:1901576											Bacteria	1VGDI@1239,3FBE4@33958,4IPQC@91061,COG1442@1,COG1442@2	NA|NA|NA	M	Glycosyl transferase family 8
PAKBJLMI_01666	272621.LBA0069	2.2e-187	661.4	Lactobacillaceae	arbY	GO:0000271,GO:0003674,GO:0003824,GO:0005975,GO:0005976,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0016051,GO:0016740,GO:0016757,GO:0043170,GO:0044238,GO:0071704,GO:1901576											Bacteria	1VGDI@1239,3FCDT@33958,4I0ZW@91061,COG1442@1,COG1442@2	NA|NA|NA	M	Glycosyl transferase family 8
PAKBJLMI_01667	272621.LBA0070	1.1e-158	565.8	Lactobacillaceae	arbx												Bacteria	1UY4M@1239,3F4YZ@33958,4IEY6@91061,COG1442@1,COG1442@2	NA|NA|NA	M	Glycosyl transferase family 8
PAKBJLMI_01668	272621.LBA0072	2.1e-148	531.6	Lactobacillaceae	arbV		2.3.1.51	ko:K00655	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	M00089	R02241,R09381	RC00004,RC00037,RC00039	ko00000,ko00001,ko00002,ko01000,ko01004				Bacteria	1V9P5@1239,3F4RC@33958,4IPQB@91061,COG0204@1,COG0204@2	NA|NA|NA	I	Acyl-transferase
PAKBJLMI_01669	272621.LBA0073	3e-78	297.7	Lactobacillaceae													Bacteria	1U7X4@1239,29DXA@1,30BCR@2,3FAA3@33958,4IHUG@91061	NA|NA|NA		
PAKBJLMI_01670	272621.LBA0074	2.8e-288	997.3	Lactobacillaceae													Bacteria	1TSRV@1239,3F514@33958,4HCIZ@91061,COG1132@1,COG1132@2	NA|NA|NA	P	ABC transporter
PAKBJLMI_01671	272621.LBA0075	1.4e-295	1021.5	Lactobacillaceae													Bacteria	1TSRV@1239,3F46B@33958,4HCIZ@91061,COG1132@1,COG1132@2	NA|NA|NA	V	ABC-type multidrug transport system, ATPase and permease components
PAKBJLMI_01673	272621.LBA0078	9.7e-132	476.1	Lactobacillaceae													Bacteria	1TPQG@1239,3F4FB@33958,4HA8Q@91061,COG0745@1,COG0745@2	NA|NA|NA	K	response regulator
PAKBJLMI_01674	272621.LBA0079	1.5e-306	1058.1	Lactobacillaceae	vicK		2.7.13.3	ko:K07652	ko02020,map02020	M00459			ko00000,ko00001,ko00002,ko01000,ko01001,ko02022				Bacteria	1TQ1H@1239,3F45G@33958,4HA52@91061,COG5002@1,COG5002@2	NA|NA|NA	T	Histidine kinase
PAKBJLMI_01675	272621.LBA0080	1e-259	902.1	Lactobacillaceae	yycH												Bacteria	1V32Y@1239,3F4HR@33958,4HG2Q@91061,COG4863@1,COG4863@2	NA|NA|NA	S	YycH protein
PAKBJLMI_01676	272621.LBA0081	9.4e-147	526.2	Lactobacillaceae	yycI												Bacteria	1V1FW@1239,3F3PV@33958,4HFWZ@91061,COG4853@1,COG4853@2	NA|NA|NA	S	YycH protein
PAKBJLMI_01677	272621.LBA0082	1.1e-149	535.8	Lactobacillaceae	vicX		3.1.26.11	ko:K00784	ko03013,map03013				ko00000,ko00001,ko01000,ko03016				Bacteria	1TQ8E@1239,3F3S4@33958,4HAKD@91061,COG1235@1,COG1235@2	NA|NA|NA	S	domain protein
PAKBJLMI_01678	272621.LBA0083	8.8e-149	533.5	Lactobacillaceae	htrA	GO:0008150,GO:0009266,GO:0009628,GO:0050896	3.4.21.107	ko:K04691,ko:K04771	ko01503,ko02020,map01503,map02020	M00728			ko00000,ko00001,ko00002,ko01000,ko01002,ko03110				Bacteria	1TRM8@1239,3F45X@33958,4HA31@91061,COG0265@1,COG0265@2	NA|NA|NA	O	serine protease
PAKBJLMI_01679	272621.LBA0084	1e-81	309.3	Lactobacillaceae	rlmH		2.1.1.177	ko:K00783					ko00000,ko01000,ko03009				Bacteria	1V3JM@1239,3F3YX@33958,4HFP8@91061,COG1576@1,COG1576@2	NA|NA|NA	J	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
PAKBJLMI_01680	272621.LBA0085	2.4e-150	538.1	Lactobacillaceae													Bacteria	1U5FX@1239,29NJE@1,31AUJ@2,3F5VD@33958,4IF77@91061	NA|NA|NA	K	Helix-turn-helix XRE-family like proteins
PAKBJLMI_01682	272621.LBA0087	2.1e-258	897.9	Lactobacillaceae				ko:K07052					ko00000				Bacteria	1VPST@1239,3F7Q6@33958,4HYU9@91061,COG1266@1,COG1266@2	NA|NA|NA	S	CAAX protease self-immunity
PAKBJLMI_01683	1423767.BALU01000010_gene378	4.5e-18	96.3	Lactobacillaceae													Bacteria	1U7V3@1239,2BMSS@1,32GC6@2,3FA7P@33958,4IHSH@91061	NA|NA|NA		
PAKBJLMI_01684	272621.LBA0091	1.1e-121	442.6	Lactobacillaceae													Bacteria	1U6U1@1239,29PNJ@1,30AKS@2,3F8HJ@33958,4IGMV@91061	NA|NA|NA		
PAKBJLMI_01685	272621.LBA0092	1.3e-175	622.1	Lactobacillaceae	pepI		3.4.11.5,3.5.1.101	ko:K01259,ko:K18457	ko00330,map00330		R00135		ko00000,ko00001,ko01000,ko01002				Bacteria	1TRMT@1239,3F40N@33958,4HE23@91061,COG2267@1,COG2267@2	NA|NA|NA	E	Releases the N-terminal proline from various substrates
PAKBJLMI_01686	272621.LBA0093	8.9e-92	343.2	Lactobacillaceae				ko:K16785	ko02010,map02010	M00582			ko00000,ko00001,ko00002,ko02000	3.A.1.25,3.A.1.28,3.A.1.29,3.A.1.30,3.A.1.31,3.A.1.32,3.A.1.33,3.A.1.35			Bacteria	1V2VE@1239,3FBE3@33958,4IPQA@91061,COG0619@1,COG0619@2	NA|NA|NA	P	Cobalt transport protein
PAKBJLMI_01687	272621.LBA0094	2.3e-251	874.4	Lactobacillaceae	cbiO1			ko:K05776,ko:K16785,ko:K16786,ko:K16787	ko02010,map02010	M00189,M00582			ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.25,3.A.1.28,3.A.1.29,3.A.1.30,3.A.1.31,3.A.1.32,3.A.1.33,3.A.1.35			Bacteria	1UI2R@1239,3F3WM@33958,4ISG8@91061,COG0488@1,COG0488@2	NA|NA|NA	S	ABC transporter, ATP-binding protein
PAKBJLMI_01688	272621.LBA0095	3.9e-173	614.0	Lactobacillaceae													Bacteria	1VCUV@1239,3F48T@33958,4HGUV@91061,COG2207@1,COG2207@2	NA|NA|NA	K	helix_turn_helix, arabinose operon control protein
PAKBJLMI_01689	272621.LBA0096	1.6e-163	582.0	Lactobacillaceae	htpX			ko:K03799		M00743			ko00000,ko00002,ko01000,ko01002				Bacteria	1TP23@1239,3F40Z@33958,4HB11@91061,COG0501@1,COG0501@2	NA|NA|NA	O	Belongs to the peptidase M48B family
PAKBJLMI_01690	272621.LBA0097	1.4e-93	349.0	Lactobacillaceae	lemA			ko:K03744					ko00000				Bacteria	1V4SV@1239,3FBKP@33958,4IR1I@91061,COG1704@1,COG1704@2	NA|NA|NA	S	LemA family
PAKBJLMI_01691	272621.LBA0098	2.9e-171	607.8	Lactobacillaceae	ybiR	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944											Bacteria	1TQCH@1239,3F4CJ@33958,4HEW7@91061,COG1055@1,COG1055@2	NA|NA|NA	P	Citrate transporter
PAKBJLMI_01693	272621.LBA0100	2.2e-69	268.1	Lactobacillaceae													Bacteria	1VY7K@1239,2F916@1,341CT@2,3F70S@33958,4HX4B@91061	NA|NA|NA	S	Iron-sulphur cluster biosynthesis
PAKBJLMI_01694	272621.LBA0101	1.1e-301	1042.0	Lactobacillaceae	glpQ		3.1.4.46	ko:K01126	ko00564,map00564		R01030,R01470	RC00017,RC00425	ko00000,ko00001,ko01000				Bacteria	1UGF1@1239,3FC1C@33958,4HBM4@91061,COG0584@1,COG0584@2,COG4781@1,COG4781@2	NA|NA|NA	C	Membrane domain of glycerophosphoryl diester phosphodiesterase
PAKBJLMI_01695	1033837.WANG_1665	1.2e-17	94.7	Lactobacillaceae													Bacteria	1U6MZ@1239,29PIJ@1,30AGQ@2,3F868@33958,4IGEU@91061	NA|NA|NA		
PAKBJLMI_01696	272621.LBA0103	4.4e-98	364.0	Lactobacillaceae													Bacteria	1VR8Q@1239,2F08C@1,33TBR@2,3F6XD@33958,4HTKM@91061	NA|NA|NA		
PAKBJLMI_01697	272621.LBA0103	6.8e-37	159.5	Lactobacillaceae													Bacteria	1VR8Q@1239,2F08C@1,33TBR@2,3F6XD@33958,4HTKM@91061	NA|NA|NA		
PAKBJLMI_01699	525365.HMPREF0548_1799	1.6e-228	798.5	Lactobacillaceae	ydaM												Bacteria	1TRCI@1239,3FC1R@33958,4HAAK@91061,COG1215@1,COG1215@2	NA|NA|NA	M	Glycosyl transferase family group 2
PAKBJLMI_01700	272621.LBA0107	1.5e-211	741.9	Lactobacillaceae													Bacteria	1VCBY@1239,3F595@33958,4HTF0@91061,COG3405@1,COG3405@2	NA|NA|NA	G	Glycosyl hydrolases family 8
PAKBJLMI_01701	272621.LBA0108	3.7e-122	444.1	Lactobacillaceae	yfbR			ko:K07023					ko00000				Bacteria	1TSDU@1239,3F4RZ@33958,4HA8H@91061,COG1896@1,COG1896@2	NA|NA|NA	S	HD containing hydrolase-like enzyme
PAKBJLMI_01702	272621.LBA0109	4e-161	573.9	Lactobacillaceae													Bacteria	1V4V2@1239,3F4P0@33958,4HI4X@91061,COG1403@1,COG1403@2	NA|NA|NA	L	HNH nucleases
PAKBJLMI_01703	272621.LBA0110	1.2e-182	645.6	Lactobacillaceae													Bacteria	1VDSW@1239,3F4C0@33958,4HMMJ@91061,COG3152@1,COG3152@2	NA|NA|NA	S	Protein of unknown function (DUF805)
PAKBJLMI_01704	272621.LBA0111	2.1e-137	495.0	Lactobacillaceae	glnQ			ko:K17074,ko:K17076	ko02010,map02010	M00589			ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.3.20			Bacteria	1TNYD@1239,3F3QQ@33958,4H9WY@91061,COG1126@1,COG1126@2	NA|NA|NA	E	ABC transporter, ATP-binding protein
PAKBJLMI_01705	272621.LBA0112	1e-293	1015.4	Lactobacillaceae	glnP			ko:K02029,ko:K02030,ko:K17073,ko:K17074	ko02010,map02010	M00236,M00589			ko00000,ko00001,ko00002,ko02000	3.A.1.3,3.A.1.3.20			Bacteria	1TPM3@1239,3F48Y@33958,4HAS2@91061,COG0765@1,COG0765@2,COG0834@1,COG0834@2	NA|NA|NA	P	ABC transporter permease
PAKBJLMI_01706	272621.LBA0113	5.5e-123	446.8	Lactobacillaceae	mpg	GO:0003674,GO:0003824,GO:0003905,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360	3.2.2.21	ko:K03652	ko03410,map03410				ko00000,ko00001,ko01000,ko03400				Bacteria	1V1E6@1239,3F59D@33958,4HG5E@91061,COG2094@1,COG2094@2	NA|NA|NA	L	Belongs to the DNA glycosylase MPG family
PAKBJLMI_01707	272621.LBA0114	2.5e-64	251.1	Lactobacillaceae	yeaO												Bacteria	1VABH@1239,3F715@33958,4HKI2@91061,COG3189@1,COG3189@2	NA|NA|NA	S	Protein of unknown function, DUF488
PAKBJLMI_01708	272621.LBA0115	5.8e-138	496.9	Lactobacillaceae	terC			ko:K05794					ko00000				Bacteria	1TQ09@1239,3FB68@33958,4HB99@91061,COG0861@1,COG0861@2	NA|NA|NA	P	Integral membrane protein TerC family
PAKBJLMI_01709	525365.HMPREF0548_1788	6.6e-55	219.9	Lactobacillaceae	ogt		2.1.1.63	ko:K00567,ko:K10778,ko:K13531					ko00000,ko01000,ko03000,ko03400				Bacteria	1VA03@1239,3F4TG@33958,4HETA@91061,COG0350@1,COG0350@2	NA|NA|NA	L	6-O-methylguanine DNA methyltransferase, DNA binding domain
PAKBJLMI_01710	272621.LBA0117	2.3e-133	481.5	Lactobacillaceae	cobB			ko:K12410					ko00000,ko01000				Bacteria	1TQKD@1239,3F4WS@33958,4HC4I@91061,COG0846@1,COG0846@2	NA|NA|NA	K	SIR2 family
PAKBJLMI_01711	272621.LBA0118	1.7e-84	318.5	Lactobacillaceae													Bacteria	1U58T@1239,2CCJZ@1,303JM@2,3F565@33958,4IF00@91061	NA|NA|NA		
PAKBJLMI_01712	272621.LBA0119	1.2e-285	988.4	Lactobacillaceae	cls	GO:0003674,GO:0003824,GO:0005575,GO:0006629,GO:0006644,GO:0006650,GO:0006655,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0008808,GO:0009058,GO:0009987,GO:0016020,GO:0016740,GO:0016772,GO:0016780,GO:0019637,GO:0030572,GO:0032048,GO:0032049,GO:0032502,GO:0043934,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0045017,GO:0046471,GO:0046474,GO:0046486,GO:0071704,GO:0090407,GO:1901576		ko:K06131	ko00564,ko01100,map00564,map01100		R07390	RC00017	ko00000,ko00001,ko01000				Bacteria	1TPKY@1239,3F3SF@33958,4H9TI@91061,COG1502@1,COG1502@2	NA|NA|NA	I	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PAKBJLMI_01713	272621.LBA0120	1.9e-180	638.3	Lactobacillaceae													Bacteria	1UY1T@1239,3F5D8@33958,4I2Y3@91061,COG4814@1,COG4814@2	NA|NA|NA	S	Alpha/beta hydrolase of unknown function (DUF915)
PAKBJLMI_01714	272621.LBA0121	3.5e-134	484.2	Lactobacillaceae	rnhA	GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576	3.1.26.4	ko:K03469,ko:K06993	ko03030,map03030				ko00000,ko00001,ko01000,ko03032				Bacteria	1V4A0@1239,3F3RG@33958,4HHJ9@91061,COG0328@1,COG0328@2,COG3341@1,COG3341@2	NA|NA|NA	L	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PAKBJLMI_01715	272621.LBA0122	7.7e-137	493.4	Lactobacillaceae	ypuA												Bacteria	1UY79@1239,3F416@33958,4HAZ5@91061,COG4086@1,COG4086@2	NA|NA|NA	S	Protein of unknown function (DUF1002)
PAKBJLMI_01716	272621.LBA0123	7.3e-160	569.7	Lactobacillaceae			2.4.1.293	ko:K00786,ko:K17250					ko00000,ko01000,ko01003		GT2		Bacteria	1VVRP@1239,3FBSG@33958,4HGSR@91061,COG0463@1,COG0463@2	NA|NA|NA	M	Glycosyltransferase like family 2
PAKBJLMI_01717	272621.LBA0124	5.6e-126	456.8	Lactobacillaceae													Bacteria	1TSFW@1239,3F5BW@33958,4HI0M@91061,COG0596@1,COG0596@2	NA|NA|NA	S	Alpha/beta hydrolase family
PAKBJLMI_01718	272621.LBA0125	8.3e-148	529.6	Lactobacillaceae													Bacteria	1UFUT@1239,29NJE@1,30GE4@2,3F51E@33958,4IEZ0@91061	NA|NA|NA	K	Helix-turn-helix XRE-family like proteins
PAKBJLMI_01719	272621.LBA0126	2.9e-51	208.0	Lactobacillaceae													Bacteria	1U6HK@1239,29PF3@1,30AD9@2,3F7XT@33958,4IG9W@91061	NA|NA|NA		
PAKBJLMI_01720	272621.LBA0614	1.2e-241	842.0	Lactobacillaceae				ko:K07497					ko00000				Bacteria	1TQQY@1239,3FCFA@33958,4HC8M@91061,COG2801@1,COG2801@2	NA|NA|NA	L	COG2963 Transposase and inactivated derivatives
PAKBJLMI_01721	272621.LBA0128	4.1e-46	190.3	Bacteria													Bacteria	COG2865@1,COG2865@2	NA|NA|NA		
PAKBJLMI_01722	272621.LBA0130	1.6e-76	292.0	Lactobacillaceae			3.6.4.12	ko:K03655	ko03440,map03440				ko00000,ko00001,ko01000,ko03400				Bacteria	1TSPK@1239,3F5RT@33958,4HF0C@91061,COG2865@1,COG2865@2	NA|NA|NA	K	Putative ATP-dependent DNA helicase recG C-terminal
PAKBJLMI_01723	272621.LBA0131	2e-183	648.3	Lactobacillaceae	prs		2.7.6.1	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	M00005	R01049	RC00002,RC00078	ko00000,ko00001,ko00002,ko01000			iAF987.Gmet_2848	Bacteria	1TQ6Q@1239,3F3V8@33958,4HB61@91061,COG0462@1,COG0462@2	NA|NA|NA	F	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PAKBJLMI_01724	272621.LBA0132	1.4e-124	452.2	Lactobacillaceae	luxT												Bacteria	1VZKY@1239,3F43G@33958,4HM1C@91061,COG1309@1,COG1309@2	NA|NA|NA	K	Bacterial regulatory proteins, tetR family
PAKBJLMI_01725	272621.LBA0133	2.1e-130	471.9	Lactobacillaceae													Bacteria	1U516@1239,2CCK0@1,309GI@2,3F3YE@33958,4IESZ@91061	NA|NA|NA		
PAKBJLMI_01726	272621.LBA0134	1.4e-257	895.2	Lactobacillaceae	glnPH2			ko:K02029,ko:K02030,ko:K17073,ko:K17074	ko02010,map02010	M00236,M00589			ko00000,ko00001,ko00002,ko02000	3.A.1.3,3.A.1.3.20			Bacteria	1TPM3@1239,3F48Y@33958,4HAS2@91061,COG0765@1,COG0765@2,COG0834@1,COG0834@2	NA|NA|NA	P	ABC transporter permease
PAKBJLMI_01727	272621.LBA0135	1.1e-133	482.6	Lactobacillaceae	glnQ		3.6.3.21	ko:K02028		M00236			ko00000,ko00002,ko01000,ko02000	3.A.1.3			Bacteria	1TNYD@1239,3F3QQ@33958,4H9WY@91061,COG1126@1,COG1126@2	NA|NA|NA	E	ABC transporter, ATP-binding protein
PAKBJLMI_01728	272621.LBA0136	6.6e-229	799.7	Lactobacillaceae													Bacteria	1V1IM@1239,3F3QG@33958,4HRX1@91061,COG2340@1,COG2340@2	NA|NA|NA	S	Cysteine-rich secretory protein family
PAKBJLMI_01729	272621.LBA0137	4.7e-207	726.9	Lactobacillaceae	ddl		6.3.2.4	ko:K01921	ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502		R01150	RC00064,RC00141	ko00000,ko00001,ko01000,ko01011				Bacteria	1TP2Y@1239,3F41Z@33958,4H9KB@91061,COG1181@1,COG1181@2	NA|NA|NA	F	Belongs to the D-alanine--D-alanine ligase family
PAKBJLMI_01730	272621.LBA0138	7.2e-90	337.0	Lactobacillaceae													Bacteria	1VN62@1239,2EIZT@1,33CQY@2,3F5GU@33958,4HRPP@91061	NA|NA|NA		
PAKBJLMI_01731	272621.LBA0139	4.8e-202	710.3	Lactobacillaceae	yibE												Bacteria	1TPEV@1239,3F3M9@33958,4HCP3@91061,COG5438@1,COG5438@2	NA|NA|NA	S	overlaps another CDS with the same product name
PAKBJLMI_01732	272621.LBA0140	2.4e-131	474.9	Lactobacillaceae	yibF												Bacteria	1TSWX@1239,3F3S6@33958,4HBKX@91061,COG5438@1,COG5438@2	NA|NA|NA	S	overlaps another CDS with the same product name
PAKBJLMI_01733	272621.LBA0141	5.6e-160	570.1	Lactobacillaceae													Bacteria	1V212@1239,3FBE2@33958,4HGWT@91061,COG0657@1,COG0657@2	NA|NA|NA	I	alpha/beta hydrolase fold
PAKBJLMI_01734	272621.LBA0143	0.0	2055.4	Lactobacillaceae													Bacteria	1TR8N@1239,3FC1B@33958,4HEJM@91061,COG1501@1,COG1501@2	NA|NA|NA	G	Belongs to the glycosyl hydrolase 31 family
PAKBJLMI_01735	272621.LBA0144	5.2e-228	796.6	Lactobacillaceae	nagA		3.5.1.25	ko:K01443	ko00520,ko01130,map00520,map01130		R02059	RC00166,RC00300	ko00000,ko00001,ko01000				Bacteria	1TPFK@1239,3F40F@33958,4HC6C@91061,COG1820@1,COG1820@2	NA|NA|NA	G	Belongs to the metallo-dependent hydrolases superfamily. NagA family
PAKBJLMI_01736	272621.LBA0145	1.8e-89	335.1	Lactobacillaceae	ntd		2.4.2.6	ko:K08728	ko00240,map00240		R02806	RC00063	ko00000,ko00001,ko01000				Bacteria	1VY4Q@1239,3F5CB@33958,4HXB4@91061,COG3613@1,COG3613@2	NA|NA|NA	F	Nucleoside
PAKBJLMI_01737	272621.LBA0146	1.1e-86	325.9	Lactobacillaceae			2.7.1.200,2.7.1.202,2.7.1.204	ko:K02768,ko:K02769,ko:K02770,ko:K02773,ko:K20112	ko00051,ko00052,ko01100,ko01120,ko02060,map00051,map00052,map01100,map01120,map02060	M00273,M00279,M00807	R03232,R05570,R11171	RC00017,RC03206	ko00000,ko00001,ko00002,ko01000,ko02000	4.A.2.1,4.A.5,4.A.5.1			Bacteria	1V8H9@1239,3F4A7@33958,4HK36@91061,COG1762@1,COG1762@2	NA|NA|NA	G	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PAKBJLMI_01738	272621.LBA0147	2.2e-148	531.6	Lactobacillaceae	ptp3		3.1.3.48	ko:K01104					ko00000,ko01000				Bacteria	1V851@1239,3F55V@33958,4HJB2@91061,COG2365@1,COG2365@2	NA|NA|NA	T	Tyrosine phosphatase family
PAKBJLMI_01739	272621.LBA0149	2.1e-85	321.6	Lactobacillaceae	uspA			ko:K03499,ko:K06149					ko00000,ko02000	2.A.38.1,2.A.38.4			Bacteria	1VEJR@1239,3F4Z0@33958,4HNHG@91061,COG0589@1,COG0589@2	NA|NA|NA	T	universal stress protein
PAKBJLMI_01740	272621.LBA0151	1.5e-164	585.5	Lactobacillaceae	phnD			ko:K02044	ko02010,map02010	M00223			ko00000,ko00001,ko00002,ko02000	3.A.1.9			Bacteria	1TR0H@1239,3F3KK@33958,4HBJQ@91061,COG3221@1,COG3221@2	NA|NA|NA	P	Phosphonate ABC transporter
PAKBJLMI_01741	272621.LBA0152	2.3e-139	501.5	Lactobacillaceae	phnC	GO:0006810,GO:0008150,GO:0015716,GO:0051179,GO:0051234,GO:0071702	3.6.3.28	ko:K02041	ko02010,map02010	M00223			ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.9			Bacteria	1TQG6@1239,3F3SJ@33958,4HC3N@91061,COG3638@1,COG3638@2	NA|NA|NA	P	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
PAKBJLMI_01742	272621.LBA0153	2.8e-132	478.0	Lactobacillaceae	phnE		3.6.1.63	ko:K02042,ko:K06162	ko00440,ko02010,map00440,map02010	M00223	R10186	RC00002	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.9			Bacteria	1TR1S@1239,3F58M@33958,4HBT8@91061,COG3639@1,COG3639@2	NA|NA|NA	P	Binding-protein-dependent transport system inner membrane component
PAKBJLMI_01743	272621.LBA0154	7.6e-149	533.1	Lactobacillaceae	phnE		3.6.1.63	ko:K02042,ko:K06162	ko00440,ko02010,map00440,map02010	M00223	R10186	RC00002	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.9			Bacteria	1V15B@1239,3F4TN@33958,4IQWU@91061,COG3639@1,COG3639@2	NA|NA|NA	P	Binding-protein-dependent transport system inner membrane component
PAKBJLMI_01744	272621.LBA0155	8.6e-107	392.9	Lactobacillaceae	tag		3.2.2.20	ko:K01246	ko03410,map03410				ko00000,ko00001,ko01000,ko03400				Bacteria	1UYWG@1239,3F5KA@33958,4HGWW@91061,COG2818@1,COG2818@2	NA|NA|NA	L	glycosylase
PAKBJLMI_01745	272621.LBA0156	1.5e-83	315.5	Lactobacillaceae													Bacteria	1U5KG@1239,2CCK1@1,309S4@2,3F64Y@33958,4IFBA@91061	NA|NA|NA		
PAKBJLMI_01746	272621.LBA0157	3.4e-274	950.3	Lactobacillaceae													Bacteria	1VMH1@1239,2EQYH@1,33II5@2,3F5E7@33958,4HUIK@91061	NA|NA|NA	S	Calcineurin-like phosphoesterase
PAKBJLMI_01747	272621.LBA0158	0.0	1337.0	Lactobacillaceae	asnB		6.3.5.4	ko:K01953	ko00250,ko01100,ko01110,map00250,map01100,map01110		R00578	RC00010	ko00000,ko00001,ko01000,ko01002				Bacteria	1TRPB@1239,3FB65@33958,4HA44@91061,COG0367@1,COG0367@2	NA|NA|NA	E	Asparagine synthase
PAKBJLMI_01748	272621.LBA0159	3.3e-252	877.1	Lactobacillaceae	yxbA		6.3.1.12	ko:K17810					ko00000,ko01000				Bacteria	1TQPN@1239,3F3S7@33958,4HAB0@91061,COG3919@1,COG3919@2	NA|NA|NA	S	ATP-grasp enzyme
PAKBJLMI_01749	272621.LBA0160	0.0	1517.3	Lactobacillaceae	nrdD	GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008270,GO:0008998,GO:0009058,GO:0009117,GO:0009165,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0015949,GO:0016491,GO:0016725,GO:0016728,GO:0017076,GO:0018130,GO:0019001,GO:0019103,GO:0019438,GO:0019637,GO:0019692,GO:0030554,GO:0031250,GO:0032552,GO:0032553,GO:0032554,GO:0032555,GO:0032556,GO:0032558,GO:0032559,GO:0032560,GO:0032564,GO:0032567,GO:0032991,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046385,GO:0046483,GO:0046872,GO:0046914,GO:0051065,GO:0055086,GO:0055114,GO:0071704,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901576	1.1.98.6	ko:K21636	ko00230,ko00240,ko01100,map00230,map00240,map01100	M00053	R11633,R11634,R11635,R11636	RC00613	ko00000,ko00001,ko00002,ko01000			iECIAI39_1322.ECIAI39_4713,iPC815.YPO3454	Bacteria	1TR9K@1239,3F435@33958,4HBIY@91061,COG1328@1,COG1328@2	NA|NA|NA	F	Ribonucleoside-triphosphate reductase
PAKBJLMI_01750	272621.LBA0161	8.1e-139	499.6	Lactobacillaceae	nrdG	GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008998,GO:0009058,GO:0009117,GO:0009165,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0015949,GO:0016491,GO:0016725,GO:0016728,GO:0018130,GO:0019438,GO:0019637,GO:0019692,GO:0031250,GO:0032991,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046385,GO:0046483,GO:0048037,GO:0051536,GO:0051539,GO:0051540,GO:0055086,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901576	1.97.1.4	ko:K04068			R04710		ko00000,ko01000			iE2348C_1286.E2348C_4563	Bacteria	1V1HG@1239,3F46H@33958,4HGJ9@91061,COG0602@1,COG0602@2	NA|NA|NA	O	Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PAKBJLMI_01751	272621.LBA0162	6.5e-99	366.7	Lactobacillaceae				ko:K02612	ko00360,ko01120,map00360,map01120		R09838	RC02690	ko00000,ko00001				Bacteria	1V9YV@1239,3F7D5@33958,4HKC6@91061,COG2151@1,COG2151@2	NA|NA|NA	S	Iron-sulfur cluster assembly protein
PAKBJLMI_01752	272621.LBA0163	1.1e-233	815.5	Lactobacillaceae	XK27_04775			ko:K09155					ko00000				Bacteria	1TRD5@1239,3F45M@33958,4HAAW@91061,COG2461@1,COG2461@2	NA|NA|NA	S	PAS domain
PAKBJLMI_01753	272621.LBA0164	1.1e-228	798.9	Lactobacillaceae	yttB												Bacteria	1TPJ6@1239,3F4F9@33958,4HAGJ@91061,COG0477@1,COG2814@2	NA|NA|NA	EGP	Major facilitator Superfamily
PAKBJLMI_01754	272621.LBA0165	0.0	1300.8	Lactobacillaceae	pepO		3.4.24.71	ko:K01415,ko:K07386					ko00000,ko01000,ko01002,ko04147				Bacteria	1TQTA@1239,3F4CX@33958,4HDSF@91061,COG3590@1,COG3590@2	NA|NA|NA	O	Peptidase family M13
PAKBJLMI_01755	525365.HMPREF0548_1732	0.0	1260.4	Lactobacillaceae	kup	GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015318,GO:0015672,GO:0016020,GO:0022857,GO:0022890,GO:0030001,GO:0034220,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0098655,GO:0098660,GO:0098662		ko:K03549					ko00000,ko02000	2.A.72			Bacteria	1TRUQ@1239,3F4CU@33958,4HA8Z@91061,COG3158@1,COG3158@2	NA|NA|NA	P	Transport of potassium into the cell
PAKBJLMI_01756	272621.LBA0167	1.9e-69	268.5	Lactobacillaceae													Bacteria	1U5KK@1239,29NU4@1,309S8@2,3F65J@33958,4IFBH@91061	NA|NA|NA		
PAKBJLMI_01757	272621.LBA0168	6.9e-11	73.9	Lactobacillaceae													Bacteria	1U6R9@1239,2AR9J@1,31GJF@2,3F8CR@33958,4IGIM@91061	NA|NA|NA		
PAKBJLMI_01758	272621.LBA0169	7.9e-212	743.0	Lactobacillaceae		GO:0005575,GO:0005623,GO:0030115,GO:0030312,GO:0044464,GO:0071944											Bacteria	1U572@1239,2DHS4@1,300QQ@2,3F4ZW@33958,4IEYM@91061	NA|NA|NA	S	SLAP domain
PAKBJLMI_01759	272621.LBA0170	3e-60	237.7	Lactobacillaceae	queD		4.1.2.50,4.2.3.12	ko:K01737	ko00790,ko01100,map00790,map01100	M00842,M00843	R04286,R09959	RC01117,RC02846,RC02847	ko00000,ko00001,ko00002,ko01000,ko03016				Bacteria	1VEAX@1239,3F7HK@33958,4HZ0J@91061,COG0720@1,COG0720@2	NA|NA|NA	H	6-pyruvoyl tetrahydropterin synthase
PAKBJLMI_01760	272621.LBA0171	2.4e-256	891.0	Lactobacillaceae	ica2			ko:K11936	ko02026,map02026				ko00000,ko00001,ko01000,ko01003,ko02000	4.D.1.1.2,4.D.1.1.3	GT2		Bacteria	1TR2P@1239,3F53W@33958,4HAQN@91061,COG1215@1,COG1215@2	NA|NA|NA	M	Glycosyl transferase family group 2
PAKBJLMI_01761	272621.LBA0173	7.3e-173	613.2	Lactobacillaceae													Bacteria	1V5MF@1239,290YK@1,2ZNKB@2,3F5RH@33958,4HX21@91061	NA|NA|NA		
PAKBJLMI_01762	272621.LBA0175	2.6e-226	791.2	Lactobacillaceae		GO:0005575,GO:0005623,GO:0030115,GO:0030312,GO:0044464,GO:0071944											Bacteria	1U572@1239,2DHS4@1,300QQ@2,3F4ZW@33958,4IEYM@91061	NA|NA|NA	S	SLAP domain
PAKBJLMI_01763	272621.LBA0176	1.1e-207	729.2	Lactobacillaceae				ko:K02395					ko00000,ko02035				Bacteria	1TVPT@1239,3F4I7@33958,4HC0X@91061,COG1705@1,COG1705@2	NA|NA|NA	NU	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
PAKBJLMI_01764	272621.LBA0177	7.2e-211	739.6	Lactobacillaceae	atl		3.2.1.96,3.5.1.28	ko:K01447,ko:K13714			R04112	RC00064,RC00141	ko00000,ko01000		GH73		Bacteria	1V3MY@1239,3F4BU@33958,4HBWG@91061,COG5632@1,COG5632@2	NA|NA|NA	M	N-acetylmuramoyl-L-alanine amidase
PAKBJLMI_01765	272621.LBA0181	0.0	1136.7	Lactobacillaceae	yjbQ			ko:K03455,ko:K03499					ko00000,ko02000	2.A.37,2.A.38.1,2.A.38.4			Bacteria	1TS32@1239,3F4AZ@33958,4H9Q5@91061,COG0475@1,COG0475@2,COG0569@1,COG0569@2	NA|NA|NA	P	TrkA C-terminal domain protein
PAKBJLMI_01766	272621.LBA0182	9.8e-180	636.0	Lactobacillaceae				ko:K22230	ko00562,ko01120,map00562,map01120		R09954	RC00182	ko00000,ko00001,ko01000				Bacteria	1TQSS@1239,3FCE9@33958,4HV6B@91061,COG0673@1,COG0673@2	NA|NA|NA	S	Oxidoreductase family, NAD-binding Rossmann fold
PAKBJLMI_01767	272621.LBA0183	7.4e-141	506.5	Lactobacillaceae													Bacteria	1U5C8@1239,29NPN@1,309MJ@2,3F5HZ@33958,4IF3G@91061	NA|NA|NA		
PAKBJLMI_01768	272621.LBA0184	1.5e-135	488.8	Lactobacillaceae													Bacteria	1U59S@1239,2E0R1@1,32W9E@2,3F5B0@33958,4IF1B@91061	NA|NA|NA		
PAKBJLMI_01769	272621.LBA0185	2.5e-132	478.0	Lactobacillaceae	gpmA	GO:0001871,GO:0003674,GO:0003824,GO:0004619,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006109,GO:0006139,GO:0006140,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009894,GO:0009986,GO:0009987,GO:0010675,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016866,GO:0016868,GO:0017144,GO:0018130,GO:0019219,GO:0019220,GO:0019222,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0030246,GO:0030247,GO:0031323,GO:0031329,GO:0032787,GO:0034248,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0043455,GO:0043456,GO:0043470,GO:0043471,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046538,GO:0046700,GO:0046939,GO:0050789,GO:0050794,GO:0051171,GO:0051174,GO:0051186,GO:0051188,GO:0051193,GO:0051196,GO:0055086,GO:0060255,GO:0062012,GO:0065007,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0080090,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1902031,GO:2001065	5.4.2.11	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	M00001,M00002,M00003	R01518	RC00536	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147				Bacteria	1TQFP@1239,3F3SK@33958,4HAW7@91061,COG0588@1,COG0588@2	NA|NA|NA	G	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PAKBJLMI_01770	272621.LBA0186	1.8e-110	405.2	Lactobacillaceae	pcp	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0019538,GO:0043170,GO:0044238,GO:0044424,GO:0044464,GO:0071704,GO:1901564	3.4.19.3	ko:K01304					ko00000,ko01000,ko01002				Bacteria	1TRRX@1239,3F46I@33958,4HCIJ@91061,COG2039@1,COG2039@2	NA|NA|NA	O	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
PAKBJLMI_01771	272621.LBA0187	1.6e-102	378.6	Lactobacillaceae													Bacteria	1U5EB@1239,3F5Q4@33958,4IF5R@91061,COG2017@1,COG2017@2	NA|NA|NA	G	Aldose 1-epimerase
PAKBJLMI_01772	272621.LBA0188	2.7e-202	711.1	Lactobacillaceae	brpA												Bacteria	1TR1B@1239,3F3MQ@33958,4HA09@91061,COG1316@1,COG1316@2	NA|NA|NA	K	Cell envelope-like function transcriptional attenuator common domain protein
PAKBJLMI_01773	272621.LBA0189	6.4e-108	396.7	Lactobacillaceae	plsY		2.3.1.15	ko:K08591	ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110	M00089	R00851,R09380	RC00004,RC00039,RC00041	ko00000,ko00001,ko00002,ko01000,ko01004				Bacteria	1VAFC@1239,3F5HQ@33958,4HMJZ@91061,COG0344@1,COG0344@2	NA|NA|NA	I	Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
PAKBJLMI_01774	272621.LBA0190	0.0	1892.5	Lactobacillaceae	XK27_08315												Bacteria	1TQYQ@1239,3F3NY@33958,4HBY6@91061,COG1368@1,COG1368@2	NA|NA|NA	M	Sulfatase
PAKBJLMI_01775	272621.LBA0191	6.2e-268	929.5	Lactobacillaceae													Bacteria	1UGQV@1239,2A3XC@1,30SFQ@2,3F5YM@33958,4IF8A@91061	NA|NA|NA	S	Fibronectin type III domain
PAKBJLMI_01776	272621.LBA0192	3.3e-244	850.5	Lactobacillaceae	tyrS	GO:0003674,GO:0003824,GO:0004812,GO:0004831,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006437,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576	6.1.1.1	ko:K01866	ko00970,map00970	M00359,M00360	R02918	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029			iAF1260.b1637,iBWG_1329.BWG_1452,iECDH10B_1368.ECDH10B_1771,iECDH1ME8569_1439.ECDH1ME8569_1581,iECH74115_1262.ECH74115_2349,iECIAI39_1322.ECIAI39_1418,iECNA114_1301.ECNA114_1685,iECO103_1326.ECO103_1778,iECO111_1330.ECO111_2107,iECO26_1355.ECO26_2366,iECSE_1348.ECSE_1760,iECSF_1327.ECSF_1500,iECSP_1301.ECSP_2202,iECUMN_1333.ECUMN_1928,iECW_1372.ECW_m1805,iECs_1301.ECs2346,iEKO11_1354.EKO11_2137,iETEC_1333.ETEC_1672,iEcDH1_1363.EcDH1_2003,iEcE24377_1341.EcE24377A_1847,iEcHS_1320.EcHS_A1713,iEcSMS35_1347.EcSMS35_1562,iEcolC_1368.EcolC_1992,iJO1366.b1637,iSFV_1184.SFV_1654,iSF_1195.SF1662,iSSON_1240.SSON_1519,iSbBS512_1146.SbBS512_E1829,iUMNK88_1353.UMNK88_2097,iWFL_1372.ECW_m1805,iY75_1357.Y75_RS08585	Bacteria	1TPGN@1239,3F48J@33958,4H9YV@91061,COG0162@1,COG0162@2	NA|NA|NA	J	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
PAKBJLMI_01777	272621.LBA0193	3.3e-56	224.2	Lactobacillaceae													Bacteria	1U655@1239,2BZTJ@1,30A3I@2,3F72R@33958,4IFUX@91061	NA|NA|NA		
PAKBJLMI_01779	272621.LBA0195	7.2e-258	896.0	Lactobacillaceae	pepC	GO:0000096,GO:0000098,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006508,GO:0006520,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008234,GO:0009056,GO:0009063,GO:0009636,GO:0009987,GO:0016054,GO:0016787,GO:0019538,GO:0019752,GO:0042221,GO:0043170,GO:0043418,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044273,GO:0044281,GO:0044282,GO:0044424,GO:0044464,GO:0046395,GO:0050667,GO:0050896,GO:0070011,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606	3.4.22.40	ko:K01372					ko00000,ko01000,ko01002				Bacteria	1TRJN@1239,3F3QA@33958,4HBZ9@91061,COG3579@1,COG3579@2	NA|NA|NA	E	aminopeptidase
PAKBJLMI_01780	272621.LBA0196	1.2e-125	455.7	Lactobacillaceae	ypgQ			ko:K06950					ko00000				Bacteria	1V7IZ@1239,3F3PN@33958,4HIVB@91061,COG1418@1,COG1418@2	NA|NA|NA	S	Metal dependent phosphohydrolases with conserved 'HD' motif.
PAKBJLMI_01781	272621.LBA0197	5e-293	1013.1	Lactobacillaceae	oppA			ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	M00239,M00439			ko00000,ko00001,ko00002,ko02000	3.A.1.5,3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25			Bacteria	1TNYQ@1239,3F3JE@33958,4HAMK@91061,COG4166@1,COG4166@2	NA|NA|NA	E	ABC transporter, substratebinding protein
PAKBJLMI_01782	272621.LBA0198	4.6e-307	1059.7	Lactobacillaceae	oppA			ko:K02035,ko:K15580	ko01501,ko02010,ko02024,map01501,map02010,map02024	M00239,M00439			ko00000,ko00001,ko00002,ko02000	3.A.1.5,3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25			Bacteria	1TNYQ@1239,3F3JE@33958,4HAMK@91061,COG4166@1,COG4166@2	NA|NA|NA	E	ABC transporter, substratebinding protein
PAKBJLMI_01783	272621.LBA0199	7.5e-211	739.6	Lactobacillaceae	guaB	GO:0003674,GO:0003824,GO:0003938,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006183,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009163,GO:0009165,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009987,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046039,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0050896,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659	1.1.1.205	ko:K00088	ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110	M00050	R01130,R08240	RC00143,RC02207	ko00000,ko00001,ko00002,ko01000,ko04147			iAPECO1_1312.APECO1_4018,iECABU_c1320.ECABU_c28100,iECP_1309.ECP_2510,iECSF_1327.ECSF_2349,iUTI89_1310.UTI89_C2826,ic_1306.c3027	Bacteria	1TNZ1@1239,3F3XN@33958,4H9V3@91061,COG0516@1,COG0516@2	NA|NA|NA	F	Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
PAKBJLMI_01784	272621.LBA0200	1.1e-143	516.2	Lactobacillaceae	oppB			ko:K02033,ko:K15581	ko01501,ko02010,ko02024,map01501,map02010,map02024	M00239,M00439			ko00000,ko00001,ko00002,ko02000	3.A.1.5,3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25			Bacteria	1TP1S@1239,3F42T@33958,4HA2S@91061,COG0601@1,COG0601@2	NA|NA|NA	P	ABC-type dipeptide oligopeptide nickel transport systems, permease components
PAKBJLMI_01785	272621.LBA0201	4e-187	660.6	Lactobacillaceae	oppC			ko:K02034,ko:K15582	ko01501,ko02010,ko02024,map01501,map02010,map02024	M00239,M00439			ko00000,ko00001,ko00002,ko02000	3.A.1.5,3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25			Bacteria	1TP4R@1239,3F3W3@33958,4H9PZ@91061,COG1173@1,COG1173@2	NA|NA|NA	EP	ABC-type dipeptide oligopeptide nickel transport systems, permease components
PAKBJLMI_01786	272621.LBA0202	2.2e-201	708.0	Lactobacillaceae	oppD			ko:K02031,ko:K02032,ko:K15583	ko01501,ko02010,ko02024,map01501,map02010,map02024	M00239,M00439			ko00000,ko00001,ko00002,ko02000	3.A.1.5,3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25			Bacteria	1TP6E@1239,3F41T@33958,4HA4E@91061,COG0444@1,COG0444@2	NA|NA|NA	P	Belongs to the ABC transporter superfamily
PAKBJLMI_01787	272621.LBA0203	1.9e-175	621.7	Lactobacillaceae	oppF			ko:K02032,ko:K10823	ko01501,ko02010,ko02024,map01501,map02010,map02024	M00239,M00439			ko00000,ko00001,ko00002,ko02000	3.A.1.5,3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25			Bacteria	1V36J@1239,3F4GM@33958,4H9YB@91061,COG4608@1,COG4608@2	NA|NA|NA	P	Belongs to the ABC transporter superfamily
PAKBJLMI_01788	272621.LBA0204	2.3e-256	891.0	Lactobacillaceae	pepC	GO:0000096,GO:0000098,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006508,GO:0006520,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008234,GO:0009056,GO:0009063,GO:0009636,GO:0009987,GO:0016054,GO:0016787,GO:0019538,GO:0019752,GO:0042221,GO:0043170,GO:0043418,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044273,GO:0044281,GO:0044282,GO:0044424,GO:0044464,GO:0046395,GO:0050667,GO:0050896,GO:0070011,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606	3.4.22.40	ko:K01372					ko00000,ko01000,ko01002				Bacteria	1TRJN@1239,3F3QA@33958,4HBZ9@91061,COG3579@1,COG3579@2	NA|NA|NA	E	aminopeptidase
PAKBJLMI_01789	272621.LBA0205	2.4e-69	268.1	Lactobacillaceae	hsp			ko:K13993	ko04141,map04141				ko00000,ko00001,ko03110				Bacteria	1VG0E@1239,3FB63@33958,4HIUZ@91061,COG0071@1,COG0071@2	NA|NA|NA	O	Belongs to the small heat shock protein (HSP20) family
PAKBJLMI_01790	272621.LBA0206	8.8e-78	296.2	Lactobacillaceae	greA			ko:K03624,ko:K04760					ko00000,ko03021				Bacteria	1V1G3@1239,3F6ZK@33958,4HW8H@91061,COG0782@1,COG0782@2	NA|NA|NA	K	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PAKBJLMI_01791	272621.LBA0207	1.3e-114	419.1	Lactobacillaceae													Bacteria	1UG72@1239,2BFBV@1,3294Z@2,3F5KI@33958,4IF41@91061	NA|NA|NA		
PAKBJLMI_01793	272621.LBA0208	4.2e-112	410.6	Lactobacillaceae													Bacteria	1TRRV@1239,3F5AJ@33958,4HHE2@91061,COG2135@1,COG2135@2	NA|NA|NA	E	Belongs to the SOS response-associated peptidase family
PAKBJLMI_01794	272621.LBA0209	6.3e-193	679.9	Lactobacillaceae	trpS	GO:0003674,GO:0003824,GO:0004812,GO:0004830,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006436,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576	6.1.1.2	ko:K01867	ko00970,map00970	M00359,M00360	R03664	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016				Bacteria	1TPY7@1239,3F3V6@33958,4HA1K@91061,COG0180@1,COG0180@2	NA|NA|NA	J	Belongs to the class-I aminoacyl-tRNA synthetase family
PAKBJLMI_01795	272621.LBA0210	6.5e-92	343.2	Lactobacillaceae	comEB		3.5.4.12	ko:K01493	ko00240,ko01100,map00240,map01100	M00429	R01663	RC00074	ko00000,ko00001,ko00002,ko01000,ko02044				Bacteria	1V3PU@1239,3FC8D@33958,4HEJU@91061,COG2131@1,COG2131@2	NA|NA|NA	F	MafB19-like deaminase
PAKBJLMI_01796	272621.LBA0211	3.4e-109	401.0	Lactobacillaceae				ko:K06872,ko:K07507					ko00000,ko02000	9.B.20			Bacteria	1V5YF@1239,3F5HD@33958,4HJVB@91061,COG1512@1,COG1512@2	NA|NA|NA	S	TPM domain
PAKBJLMI_01797	272621.LBA0212	0.0	1687.2	Lactobacillaceae	mgtA	GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008324,GO:0015075,GO:0015318,GO:0015399,GO:0015405,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0031224,GO:0031226,GO:0034220,GO:0042623,GO:0042625,GO:0042626,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043492,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0090662,GO:0098655,GO:0098660,GO:0099131,GO:0099132	3.6.3.2	ko:K01531					ko00000,ko01000	3.A.3.4		iSF_1195.SF4248	Bacteria	1TPF5@1239,3F4E0@33958,4HBQJ@91061,COG0474@1,COG0474@2	NA|NA|NA	P	COG0474 Cation transport ATPase
PAKBJLMI_01798	272621.LBA0213	0.0	1330.5	Lactobacillaceae	metG	GO:0003674,GO:0003824,GO:0004812,GO:0004825,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006431,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0040007,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576	6.1.1.10	ko:K01874	ko00450,ko00970,map00450,map00970	M00359,M00360	R03659,R04773	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016				Bacteria	1TPA1@1239,3F3XR@33958,4H9VC@91061,COG0143@1,COG0143@2	NA|NA|NA	J	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
PAKBJLMI_01799	272621.LBA0214	6e-148	530.0	Lactobacillaceae	tatD	GO:0003674,GO:0003824,GO:0004518,GO:0004536,GO:0006139,GO:0006259,GO:0006308,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016787,GO:0016788,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901361,GO:1901575		ko:K03424					ko00000,ko01000				Bacteria	1TNY1@1239,3F3N2@33958,4HA74@91061,COG0084@1,COG0084@2	NA|NA|NA	L	hydrolase, TatD family
PAKBJLMI_01800	272621.LBA0215	1.6e-92	345.5	Lactobacillaceae	rnmV	GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0022613,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043822,GO:0044085,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360	3.1.26.8	ko:K05985,ko:K07476					ko00000,ko01000				Bacteria	1V3K3@1239,3F64F@33958,4HH5Y@91061,COG1658@1,COG1658@2	NA|NA|NA	J	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
PAKBJLMI_01801	272621.LBA0216	1.4e-161	575.5	Lactobacillaceae	ksgA	GO:0000154,GO:0000179,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360	2.1.1.182	ko:K02528,ko:K15256			R10716	RC00003,RC03257	ko00000,ko01000,ko03009,ko03016				Bacteria	1TP9W@1239,3F3VC@33958,4HA4R@91061,COG0030@1,COG0030@2	NA|NA|NA	J	Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
PAKBJLMI_01802	272621.LBA0217	3.5e-39	167.2	Lactobacillaceae	veg												Bacteria	1VEQM@1239,3F7D3@33958,4HKF8@91061,COG4466@1,COG4466@2	NA|NA|NA	S	Biofilm formation stimulator VEG
PAKBJLMI_01803	272621.LBA0218	1.6e-149	535.4	Lactobacillaceae	purR		2.4.2.22,2.4.2.7	ko:K00759,ko:K03816,ko:K09685	ko00230,ko01100,ko01110,map00230,map01100,map01110		R00190,R01229,R02142,R04378	RC00063,RC00122	ko00000,ko00001,ko01000,ko03000,ko04147				Bacteria	1TPN9@1239,3F3NH@33958,4HB8I@91061,COG0503@1,COG0503@2	NA|NA|NA	F	pur operon repressor
PAKBJLMI_01804	272621.LBA0219	1.4e-211	742.3	Lactobacillaceae	glmU	GO:0000270,GO:0000271,GO:0000287,GO:0003674,GO:0003824,GO:0003977,GO:0005488,GO:0005975,GO:0005976,GO:0006022,GO:0006023,GO:0006024,GO:0006629,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0009058,GO:0009059,GO:0009103,GO:0009252,GO:0009273,GO:0009987,GO:0016051,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0016772,GO:0016779,GO:0019134,GO:0022610,GO:0030203,GO:0030260,GO:0033692,GO:0034637,GO:0034645,GO:0035635,GO:0040007,GO:0042546,GO:0043167,GO:0043169,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044403,GO:0044406,GO:0044409,GO:0044419,GO:0044650,GO:0046872,GO:0051701,GO:0051704,GO:0051806,GO:0051828,GO:0070569,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1903509	2.3.1.157,2.7.7.23	ko:K04042,ko:K11528	ko00520,ko01100,ko01130,map00520,map01100,map01130	M00362	R00416,R05332	RC00002,RC00004,RC00166	ko00000,ko00001,ko00002,ko01000				Bacteria	1TP88@1239,3F4I3@33958,4H9V5@91061,COG1207@1,COG1207@2	NA|NA|NA	M	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
PAKBJLMI_01805	272621.LBA0220	9.6e-89	332.8	Lactobacillaceae													Bacteria	1U6AS@1239,2DKPF@1,30A7K@2,3F7GS@33958,4IG26@91061	NA|NA|NA	S	SLAP domain
PAKBJLMI_01806	272621.LBA0221	2.2e-96	358.2	Lactobacillaceae													Bacteria	1U7P1@1239,2BK3T@1,32EHA@2,3F9YU@33958,4IHKA@91061	NA|NA|NA	S	SLAP domain
PAKBJLMI_01807	272621.LBA0222	1.5e-86	326.2	Lactobacillaceae													Bacteria	1U593@1239,2DKIG@1,309K1@2,3F586@33958,4IF0E@91061	NA|NA|NA		
PAKBJLMI_01808	272621.LBA0223	7.3e-239	833.2	Lactobacillaceae													Bacteria	1U56A@1239,2DKI3@1,309IT@2,3F4WY@33958,4IEXK@91061	NA|NA|NA	S	SLAP domain
PAKBJLMI_01809	272621.LBA0224	4.6e-177	627.1	Lactobacillaceae	prs		2.7.6.1	ko:K00948	ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230	M00005	R01049	RC00002,RC00078	ko00000,ko00001,ko00002,ko01000			iAF987.Gmet_2848	Bacteria	1TQ6Q@1239,3F3U2@33958,4HB61@91061,COG0462@1,COG0462@2	NA|NA|NA	F	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PAKBJLMI_01810	272621.LBA0225	5.2e-294	1016.1	Lactobacillaceae	celA		3.2.1.86	ko:K01223	ko00010,ko00500,map00010,map00500		R00839,R05133,R05134	RC00049,RC00171,RC00714	ko00000,ko00001,ko01000		GT1		Bacteria	1TP19@1239,3F3PQ@33958,4HA1W@91061,COG2723@1,COG2723@2	NA|NA|NA	G	Belongs to the glycosyl hydrolase 1 family
PAKBJLMI_01811	272621.LBA0226	7.7e-129	466.5	Lactobacillaceae				ko:K03481					ko00000,ko03000				Bacteria	1V5JY@1239,3FC4E@33958,4HI0D@91061,COG1737@1,COG1737@2	NA|NA|NA	K	Helix-turn-helix domain, rpiR family
PAKBJLMI_01812	272621.LBA0227	1.2e-231	808.9	Lactobacillaceae	ptcC			ko:K02761	ko00500,ko02060,map00500,map02060	M00275	R11170,R11172	RC00017,RC03206	ko00000,ko00001,ko00002,ko02000	4.A.3.2			Bacteria	1TP8D@1239,3F5XI@33958,4HBC9@91061,COG1455@1,COG1455@2	NA|NA|NA	G	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PAKBJLMI_01813	272621.LBA0228	3.3e-169	600.9	Lactobacillaceae			2.7.1.2	ko:K00845	ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200	M00001,M00549	R00299,R01600,R01786	RC00002,RC00017	ko00000,ko00001,ko00002,ko01000				Bacteria	1TRQ7@1239,3F3ZI@33958,4HE30@91061,COG1940@1,COG1940@2	NA|NA|NA	GK	ROK family
PAKBJLMI_01814	272621.LBA0229	3.9e-44	183.7	Lactobacillaceae													Bacteria	1U6GK@1239,29PEC@1,30ACI@2,3F7VQ@33958,4IG8S@91061	NA|NA|NA		
PAKBJLMI_01815	272621.LBA0230	7.2e-269	932.6	Lactobacillaceae	ywfO	GO:0003674,GO:0003824,GO:0006139,GO:0006163,GO:0006195,GO:0006203,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008832,GO:0009056,GO:0009058,GO:0009117,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009151,GO:0009155,GO:0009166,GO:0009200,GO:0009204,GO:0009215,GO:0009217,GO:0009262,GO:0009264,GO:0009394,GO:0009987,GO:0016787,GO:0016788,GO:0016793,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042578,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046070,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576		ko:K06885					ko00000				Bacteria	1TPVB@1239,3FC99@33958,4IQRC@91061,COG1078@1,COG1078@2	NA|NA|NA	S	Metal dependent phosphohydrolases with conserved 'HD' motif.
PAKBJLMI_01816	272621.LBA0231	9.5e-68	262.7	Lactobacillaceae													Bacteria	1U64K@1239,29P4Y@1,30A35@2,3F712@33958,4IFU4@91061	NA|NA|NA	S	Domain of unknown function (DUF1934)
PAKBJLMI_01817	525365.HMPREF0548_1974	3.3e-47	194.9	Lactobacillaceae	rpoE	GO:0003674,GO:0003824,GO:0003899,GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576		ko:K03048	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	M00183	R00435,R00441,R00442,R00443	RC02795	br01611,ko00000,ko00001,ko00002,ko03021,ko03400				Bacteria	1V6WX@1239,3F55D@33958,4HIUK@91061,COG3343@1,COG3343@2	NA|NA|NA	K	Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
PAKBJLMI_01818	272621.LBA0233	0.0	1076.6	Lactobacillaceae	pyrG	GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0044464,GO:0071944	6.3.4.2	ko:K01937	ko00240,ko01100,map00240,map01100	M00052	R00571,R00573	RC00010,RC00074	ko00000,ko00001,ko00002,ko01000			iHN637.CLJU_RS01075,iNJ661.Rv1699	Bacteria	1TP34@1239,3F42X@33958,4H9X6@91061,COG0504@1,COG0504@2	NA|NA|NA	F	Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
PAKBJLMI_01819	272621.LBA0234	1.8e-245	854.7	Lactobacillaceae	murA	GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008760,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016740,GO:0016765,GO:0030203,GO:0034645,GO:0042221,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046677,GO:0050896,GO:0051716,GO:0070589,GO:0070887,GO:0071236,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576	2.5.1.7	ko:K00790	ko00520,ko00550,ko01100,map00520,map00550,map01100		R00660	RC00350	ko00000,ko00001,ko01000,ko01011			iYO844.BSU37100	Bacteria	1TPAU@1239,3F3P8@33958,4H9KI@91061,COG0766@1,COG0766@2	NA|NA|NA	M	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PAKBJLMI_01820	1423748.BALB01000008_gene976	1.5e-277	961.4	Lactobacillaceae	pipD			ko:K08659					ko00000,ko01000,ko01002				Bacteria	1TQ0F@1239,3F3M4@33958,4HC3G@91061,COG4690@1,COG4690@2	NA|NA|NA	E	Dipeptidase
PAKBJLMI_01821	272621.LBA0237	7.4e-160	569.7	Lactobacillaceae	msmR												Bacteria	1V8G6@1239,3FBER@33958,4HIF6@91061,COG2207@1,COG2207@2	NA|NA|NA	K	AraC-like ligand binding domain
PAKBJLMI_01822	272621.LBA0238	7e-107	393.3	Lactobacillaceae													Bacteria	1VNI3@1239,3F5J9@33958,4HSHZ@91061,COG3548@1,COG3548@2	NA|NA|NA	S	Protein of unknown function (DUF1211)
PAKBJLMI_01823	272621.LBA0239	5.2e-221	773.5	Lactobacillaceae	pbuX	GO:0003674,GO:0005215,GO:0005345,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006863,GO:0008150,GO:0015205,GO:0015851,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0042906,GO:0042907,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0072530,GO:1904823		ko:K02824,ko:K03458,ko:K16169,ko:K16170					ko00000,ko02000	2.A.40,2.A.40.1.1,2.A.40.1.2,2.A.40.3.1,2.A.40.3.2		iSB619.SA_RS02140	Bacteria	1TNZZ@1239,3F3Y7@33958,4HBAM@91061,COG2233@1,COG2233@2	NA|NA|NA	F	xanthine permease
PAKBJLMI_01824	272621.LBA0240	1.1e-104	386.0	Lactobacillaceae	xpt	GO:0003674,GO:0003824,GO:0006139,GO:0006166,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0043094,GO:0043101,GO:0043174,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046128,GO:0046129,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659	2.4.2.22,2.4.2.7	ko:K00759,ko:K03816,ko:K09685	ko00230,ko01100,ko01110,map00230,map01100,map01110		R00190,R01229,R02142,R04378	RC00063,RC00122	ko00000,ko00001,ko01000,ko03000,ko04147			iYO844.BSU22070	Bacteria	1V1DU@1239,3F49S@33958,4HFNW@91061,COG0503@1,COG0503@2	NA|NA|NA	F	Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
PAKBJLMI_01825	272621.LBA0242	1.5e-135	488.8	Lactobacillaceae													Bacteria	1V36C@1239,3F65G@33958,4IT3D@91061,COG1476@1,COG1476@2	NA|NA|NA	K	DNA-binding helix-turn-helix protein
PAKBJLMI_01826	272621.LBA0244	7.5e-172	609.8	Lactobacillaceae													Bacteria	1VETP@1239,3F4HG@33958,4HCJ3@91061,COG1396@1,COG1396@2	NA|NA|NA	K	Helix-turn-helix
PAKBJLMI_01827	272621.LBA0245	6e-304	1049.3	Lactobacillaceae	guaA	GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659	2.3.1.128,6.3.5.2	ko:K01951,ko:K03790	ko00230,ko00983,ko01100,map00230,map00983,map01100	M00050	R01230,R01231,R08244	RC00010,RC00204	ko00000,ko00001,ko00002,ko01000,ko01002,ko03009			iLJ478.TM1820	Bacteria	1TPG8@1239,3F3NV@33958,4HA7Q@91061,COG0519@1,COG0519@2	NA|NA|NA	F	Catalyzes the synthesis of GMP from XMP
PAKBJLMI_01828	272621.LBA0246	2.5e-155	554.7	Lactobacillaceae	cylA			ko:K01990,ko:K11050	ko02010,map02010	M00254,M00298			ko00000,ko00001,ko00002,ko02000	3.A.1,3.A.1.130			Bacteria	1TPMQ@1239,3FBEB@33958,4IPQJ@91061,COG1131@1,COG1131@2	NA|NA|NA	V	ABC transporter
PAKBJLMI_01829	272621.LBA0247	4e-148	530.8	Lactobacillaceae	cylB			ko:K11051	ko02010,map02010	M00298			ko00000,ko00001,ko00002,ko02000	3.A.1.130			Bacteria	1TSH0@1239,3F6AK@33958,4HFNX@91061,COG0842@1,COG0842@2	NA|NA|NA	V	ABC-2 type transporter
PAKBJLMI_01830	272621.LBA0248	2.9e-73	281.2	Lactobacillaceae													Bacteria	1W04J@1239,3F6TA@33958,4HRMI@91061,COG3279@1,COG3279@2	NA|NA|NA	K	LytTr DNA-binding domain
PAKBJLMI_01831	257314.LJ_0248	2.7e-43	181.4	Lactobacillaceae													Bacteria	1W1VM@1239,2DDF3@1,2ZHT9@2,3F81B@33958,4I0YY@91061	NA|NA|NA	S	Protein of unknown function (DUF3021)
PAKBJLMI_01832	272621.LBA0249	1.9e-89	335.1	Lactobacillaceae	XK27_09675			ko:K07105					ko00000				Bacteria	1UHPQ@1239,3FBT6@33958,4IS5I@91061,COG0454@1,COG0454@2	NA|NA|NA	K	Acetyltransferase (GNAT) domain
PAKBJLMI_01833	272621.LBA0250	7e-135	486.5	Lactobacillaceae													Bacteria	1TT38@1239,3F4C9@33958,4HCE2@91061,COG3382@1,COG3382@2	NA|NA|NA	S	B3 4 domain
PAKBJLMI_01834	272621.LBA0251	5.4e-90	337.0	Lactobacillaceae	lmrB												Bacteria	1TPRN@1239,3F9HZ@33958,4H9VV@91061,COG0477@1,COG2814@2	NA|NA|NA	P	Belongs to the major facilitator superfamily
PAKBJLMI_01835	272621.LBA0252	1.6e-32	144.8	Lactobacillaceae													Bacteria	1TPRN@1239,3F9HZ@33958,4H9VV@91061,COG0477@1,COG2814@2	NA|NA|NA	P	Belongs to the major facilitator superfamily
PAKBJLMI_01836	272621.LBA0254	1.9e-30	137.9	Lactobacillaceae													Bacteria	1U70R@1239,29PTC@1,30ARI@2,3F8TN@33958,4IGV2@91061	NA|NA|NA		
PAKBJLMI_01837	272621.LBA0255	7.7e-82	309.7	Lactobacillaceae	ogt	GO:0003674,GO:0003824,GO:0003908,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006281,GO:0006304,GO:0006307,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008168,GO:0008172,GO:0009987,GO:0016020,GO:0016740,GO:0016741,GO:0032259,GO:0033554,GO:0034641,GO:0035510,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044464,GO:0046483,GO:0050896,GO:0051409,GO:0051716,GO:0071704,GO:0071944,GO:0090304,GO:1901360	2.1.1.63	ko:K00567					ko00000,ko01000,ko03400				Bacteria	1VA03@1239,3FC2Q@33958,4HKC0@91061,COG0350@1,COG0350@2	NA|NA|NA	L	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
PAKBJLMI_01838	272621.LBA0256	2.5e-28	130.6	Bacteria				ko:K12410					ko00000,ko01000				Bacteria	COG0846@1,COG0846@2	NA|NA|NA	K	NAD+ binding
PAKBJLMI_01840	272621.LBA0258	2.1e-96	358.2	Lactobacillaceae													Bacteria	1U53J@1239,29NJI@1,309HE@2,3F4CT@33958,4IEUW@91061	NA|NA|NA		
PAKBJLMI_01841	272621.LBA0259	3.7e-51	207.2	Lactobacillaceae													Bacteria	1W1MV@1239,28QH1@1,2ZCZ3@2,3F7TZ@33958,4IG80@91061	NA|NA|NA		
PAKBJLMI_01842	272621.LBA0260	6.7e-44	183.0	Lactobacillaceae													Bacteria	1W6M0@1239,2ETIJ@1,33M2D@2,3F7HE@33958,4IG2F@91061	NA|NA|NA		
PAKBJLMI_01843	272621.LBA0261	1.3e-232	812.0	Lactobacillaceae	glyA		2.1.2.1	ko:K00600	ko00260,ko00460,ko00630,ko00670,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko01523,map00260,map00460,map00630,map00670,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map01523	M00140,M00141,M00346,M00532	R00945,R09099	RC00022,RC00112,RC01583,RC02958	ko00000,ko00001,ko00002,ko01000				Bacteria	1TQVM@1239,3F4C1@33958,4HA5K@91061,COG0112@1,COG0112@2	NA|NA|NA	E	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
PAKBJLMI_01844	272621.LBA0262	1.1e-300	1038.5	Lactobacillaceae	ybeC												Bacteria	1TPJH@1239,3FCAM@33958,4HUE6@91061,COG0531@1,COG0531@2	NA|NA|NA	E	amino acid
PAKBJLMI_01845	272621.LBA0263	3.7e-159	567.4	Lactobacillaceae													Bacteria	1UYU8@1239,3F3ZW@33958,4HE0K@91061,COG0561@1,COG0561@2	NA|NA|NA	G	Sucrose-6F-phosphate phosphohydrolase
PAKBJLMI_01846	272621.LBA0264	0.0	1134.0	Lactobacillaceae	dexB	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464	3.2.1.10,3.2.1.70	ko:K01182,ko:K01215	ko00052,ko00500,ko01100,map00052,map00500,map01100		R00801,R01718,R01791,R06199	RC00028,RC00059,RC00077,RC00451	ko00000,ko00001,ko01000		GH13		Bacteria	1TP53@1239,3F41I@33958,4HA1G@91061,COG0366@1,COG0366@2	NA|NA|NA	G	Alpha amylase, catalytic domain protein
PAKBJLMI_01847	272621.LBA0265	1.9e-39	167.9	Lactobacillaceae	rpmE2	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006950,GO:0007154,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009267,GO:0009605,GO:0009987,GO:0009991,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0031667,GO:0031668,GO:0031669,GO:0032991,GO:0033554,GO:0034224,GO:0034641,GO:0034645,GO:0042594,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050896,GO:0051716,GO:0071496,GO:0071704,GO:0120127,GO:1901564,GO:1901566,GO:1901576,GO:1990904		ko:K02909	ko03010,map03010	M00178			br01610,ko00000,ko00001,ko00002,ko03011				Bacteria	1VEGU@1239,3FCDM@33958,4HNQF@91061,COG0254@1,COG0254@2	NA|NA|NA	J	Ribosomal protein L31
PAKBJLMI_01848	272621.LBA0266	7.7e-263	912.5	Lactobacillaceae	murF		6.3.2.10,6.3.2.13	ko:K01928,ko:K01929	ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502		R02788,R04573,R04617	RC00064,RC00090,RC00141	ko00000,ko00001,ko01000,ko01011				Bacteria	1VT78@1239,3F4SK@33958,4HACR@91061,COG0770@1,COG0770@2	NA|NA|NA	M	Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
PAKBJLMI_01849	272621.LBA0267	3.9e-252	877.1	Lactobacillaceae	cshA	GO:0000166,GO:0003674,GO:0003676,GO:0003723,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006725,GO:0006807,GO:0006950,GO:0008026,GO:0008144,GO:0008150,GO:0008152,GO:0008186,GO:0009266,GO:0009295,GO:0009409,GO:0009628,GO:0009987,GO:0010501,GO:0016020,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043590,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0070035,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:1901265,GO:1901360,GO:1901363	3.6.4.13	ko:K05592,ko:K18692	ko03018,map03018				ko00000,ko00001,ko01000,ko03009,ko03019				Bacteria	1TPAP@1239,3F46Q@33958,4HAB3@91061,COG0513@1,COG0513@2	NA|NA|NA	F	DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
PAKBJLMI_01850	272621.LBA0268	7.6e-61	239.6	Lactobacillaceae	acpS		2.7.6.3,2.7.8.7,5.1.1.1	ko:K00950,ko:K00997,ko:K01775	ko00473,ko00770,ko00790,ko01100,ko01502,map00473,map00770,map00790,map01100,map01502	M00126,M00841	R00401,R01625,R03503	RC00002,RC00017,RC00285	ko00000,ko00001,ko00002,ko01000,ko01011			iYO844.BSU04620	Bacteria	1VA0T@1239,3F6HC@33958,4HKBI@91061,COG0736@1,COG0736@2	NA|NA|NA	I	Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
PAKBJLMI_01851	272621.LBA0269	1.2e-216	758.8	Lactobacillaceae	alr		5.1.1.1	ko:K01775	ko00473,ko01100,ko01502,map00473,map01100,map01502		R00401	RC00285	ko00000,ko00001,ko01000,ko01011				Bacteria	1TNYY@1239,3F3X2@33958,4HA95@91061,COG0787@1,COG0787@2	NA|NA|NA	E	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
PAKBJLMI_01852	272621.LBA0270	2.9e-128	464.5	Lactobacillaceae													Bacteria	1TR5G@1239,3F3JY@33958,4H9ZA@91061,COG0517@1,COG0517@2	NA|NA|NA	S	(CBS) domain
PAKBJLMI_01853	272621.LBA0271	2.1e-182	644.8	Lactobacillaceae	ldh		1.1.1.27	ko:K00016	ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922		R00703,R01000,R03104	RC00031,RC00044	ko00000,ko00001,ko01000,ko04147				Bacteria	1TPSY@1239,3F3RM@33958,4HB0Z@91061,COG0039@1,COG0039@2	NA|NA|NA	C	Belongs to the LDH MDH superfamily. LDH family
PAKBJLMI_01854	272621.LBA0272	1.3e-104	385.6	Lactobacillaceae	pth	GO:0003674,GO:0003824,GO:0004045,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0016787,GO:0016788,GO:0040007,GO:0044464,GO:0052689,GO:0071944,GO:0140098,GO:0140101	3.1.1.29	ko:K01056					ko00000,ko01000,ko03012				Bacteria	1V3NB@1239,3F3VZ@33958,4HH2Z@91061,COG0193@1,COG0193@2	NA|NA|NA	J	The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
PAKBJLMI_01855	272621.LBA0273	0.0	1300.4	Lactobacillaceae	mfd			ko:K03723	ko03420,map03420				ko00000,ko00001,ko01000,ko03400				Bacteria	1TPF1@1239,3F4KU@33958,4H9NB@91061,COG1197@1,COG1197@2	NA|NA|NA	L	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
PAKBJLMI_01856	272621.LBA0273	1.9e-275	954.5	Lactobacillaceae	mfd			ko:K03723	ko03420,map03420				ko00000,ko00001,ko01000,ko03400				Bacteria	1TPF1@1239,3F4KU@33958,4H9NB@91061,COG1197@1,COG1197@2	NA|NA|NA	L	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
PAKBJLMI_01857	1423748.BALB01000002_gene346	2.4e-34	151.0	Lactobacillaceae	yabO	GO:0008150,GO:0040007											Bacteria	1VEI5@1239,3F7JX@33958,4HKJJ@91061,COG1188@1,COG1188@2	NA|NA|NA	J	S4 domain protein
PAKBJLMI_01858	272621.LBA0275	1.1e-57	229.2	Lactobacillaceae	divIC			ko:K05589,ko:K13052					ko00000,ko03036				Bacteria	1VKC5@1239,3F76Z@33958,4HR53@91061,COG2919@1,COG2919@2	NA|NA|NA	D	Septum formation initiator
PAKBJLMI_01859	272621.LBA0276	2.8e-63	247.7	Lactobacillaceae	yabR			ko:K07570,ko:K07571					ko00000				Bacteria	1UI95@1239,3F6P8@33958,4ISGM@91061,COG1098@1,COG1098@2	NA|NA|NA	J	S1 RNA binding domain
PAKBJLMI_01860	272621.LBA0277	2.2e-240	837.8	Lactobacillaceae	tilS		2.4.2.8,6.3.4.19	ko:K04075,ko:K15780	ko00230,ko01100,ko01110,map00230,map01100,map01110		R01132,R01229,R02142,R09597	RC00063,RC00122,RC02633,RC02634	ko00000,ko00001,ko01000,ko03016				Bacteria	1TPXP@1239,3F4GY@33958,4H9ZM@91061,COG0037@1,COG0037@2	NA|NA|NA	J	Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
PAKBJLMI_01861	272621.LBA0278	0.0	1271.1	Lactobacillaceae	ftsH	GO:0003674,GO:0003824,GO:0004176,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009056,GO:0009057,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019538,GO:0030163,GO:0030428,GO:0032502,GO:0042623,GO:0043170,GO:0043934,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575		ko:K03798		M00742			ko00000,ko00002,ko01000,ko01002,ko03110				Bacteria	1TPTV@1239,3F49Z@33958,4HAJB@91061,COG0465@1,COG0465@2	NA|NA|NA	O	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
PAKBJLMI_01862	272621.LBA0279	2.6e-166	591.3	Lactobacillaceae	hslO	GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006950,GO:0006979,GO:0008150,GO:0008270,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0031647,GO:0036506,GO:0042026,GO:0042802,GO:0043167,GO:0043169,GO:0044183,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0050896,GO:0065007,GO:0065008		ko:K04083					ko00000,ko03110				Bacteria	1TRCH@1239,3F42B@33958,4HAFR@91061,COG1281@1,COG1281@2	NA|NA|NA	O	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
PAKBJLMI_01863	272621.LBA0280	1.4e-195	688.7	Lactobacillaceae	dus			ko:K05540					ko00000,ko01000,ko03016				Bacteria	1TQ2R@1239,3F4C6@33958,4HA9K@91061,COG0042@1,COG0042@2	NA|NA|NA	J	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PAKBJLMI_01864	272621.LBA0281	1.5e-302	1044.6	Lactobacillaceae	lysS	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464	6.1.1.6	ko:K04567	ko00970,map00970	M00359,M00360	R03658	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016				Bacteria	1TP2P@1239,3F439@33958,4H9X4@91061,COG1190@1,COG1190@2	NA|NA|NA	J	Belongs to the class-II aminoacyl-tRNA synthetase family
PAKBJLMI_01865	1397696.KK211189_gene2556	7.8e-08	61.2	Bacilli													Bacteria	1VK6Y@1239,2DR03@1,339MB@2,4HR34@91061	NA|NA|NA		
PAKBJLMI_01866	1397696.KK211189_gene2556	7.8e-08	61.2	Bacilli													Bacteria	1VK6Y@1239,2DR03@1,339MB@2,4HR34@91061	NA|NA|NA		
PAKBJLMI_01868	272621.LBA0282	4.9e-81	307.0	Lactobacillaceae	yebR		1.8.4.14	ko:K08968	ko00270,map00270		R02025	RC00639	ko00000,ko00001,ko01000				Bacteria	1V6GQ@1239,3F6NT@33958,4HH7X@91061,COG1956@1,COG1956@2	NA|NA|NA	T	GAF domain-containing protein
PAKBJLMI_01869	272621.LBA0283	0.0	1521.1	Lactobacillaceae	clpC	GO:0006950,GO:0008150,GO:0010035,GO:0010038,GO:0042221,GO:0046686,GO:0046688,GO:0050896,GO:0097501,GO:1990169,GO:1990170		ko:K03696	ko01100,map01100				ko00000,ko03110				Bacteria	1TPMU@1239,3F3RV@33958,4HACY@91061,COG0542@1,COG0542@2	NA|NA|NA	O	Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
PAKBJLMI_01870	272621.LBA0284	0.0	2415.2	Lactobacillaceae	rpoB	GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234	2.7.7.6	ko:K03043	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	M00183	R00435,R00441,R00442,R00443	RC02795	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400				Bacteria	1TP96@1239,3F4ET@33958,4H9PK@91061,COG0085@1,COG0085@2	NA|NA|NA	K	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PAKBJLMI_01871	272621.LBA0285	0.0	2417.9	Lactobacillaceae	rpoC	GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234	2.7.7.6	ko:K03046	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	M00183	R00435,R00441,R00442,R00443	RC02795	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400				Bacteria	1TNYT@1239,3F3KF@33958,4HA24@91061,COG0086@1,COG0086@2	NA|NA|NA	K	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PAKBJLMI_01872	272621.LBA0286	7.9e-123	446.4	Lactobacillaceae	pilD		3.4.23.43	ko:K02236,ko:K02506,ko:K02654		M00331,M00429			ko00000,ko00002,ko01000,ko01002,ko02035,ko02044	3.A.15.2			Bacteria	1W118@1239,3F863@33958,4HZ6B@91061,COG1989@1,COG1989@2	NA|NA|NA	NOU	Bacterial Peptidase A24 N-terminal domain
PAKBJLMI_01873	272621.LBA0287	1.3e-69	268.9	Lactobacillaceae	rpsL	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904		ko:K02950	ko03010,map03010	M00178,M00179			br01610,ko00000,ko00001,ko00002,ko03011				Bacteria	1V1FJ@1239,3F64B@33958,4HFMZ@91061,COG0048@1,COG0048@2	NA|NA|NA	J	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
PAKBJLMI_01874	1423748.BALB01000002_gene332	2.7e-82	311.2	Lactobacillaceae	rpsG	GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006417,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015935,GO:0016020,GO:0016043,GO:0017148,GO:0019222,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030312,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065003,GO:0065007,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0080090,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904,GO:2000112,GO:2000113		ko:K02992	ko03010,map03010	M00178,M00179			br01610,ko00000,ko00001,ko00002,ko03011				Bacteria	1V1GG@1239,3F3RX@33958,4H9PA@91061,COG0049@1,COG0049@2	NA|NA|NA	J	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
PAKBJLMI_01875	272621.LBA0289	0.0	1377.8	Lactobacillaceae	fusA	GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0019538,GO:0030312,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576		ko:K02355					ko00000,ko03012,ko03029				Bacteria	1TPF9@1239,3F3JR@33958,4HAB8@91061,COG0480@1,COG0480@2	NA|NA|NA	J	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
PAKBJLMI_01876	1033837.WANG_1903	4.4e-49	200.3	Lactobacillaceae	rpsJ	GO:0001072,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006355,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0015935,GO:0019219,GO:0019222,GO:0019538,GO:0022626,GO:0022627,GO:0031323,GO:0031326,GO:0031554,GO:0031564,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043244,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0140110,GO:1901564,GO:1901566,GO:1901576,GO:1903506,GO:1990904,GO:2000112,GO:2001141		ko:K02946	ko03010,map03010	M00178,M00179			br01610,ko00000,ko00001,ko00002,ko03011				Bacteria	1V6C9@1239,3F6KC@33958,4HIKH@91061,COG0051@1,COG0051@2	NA|NA|NA	J	Involved in the binding of tRNA to the ribosomes
PAKBJLMI_01877	272621.LBA0291	6.9e-113	413.3	Lactobacillaceae	rplC	GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010604,GO:0010628,GO:0015934,GO:0016020,GO:0016043,GO:0019219,GO:0019222,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0031323,GO:0031325,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065003,GO:0065007,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0080090,GO:0090069,GO:0090070,GO:1901564,GO:1901566,GO:1901576,GO:1990904,GO:2000232,GO:2000234		ko:K02906	ko03010,map03010	M00178,M00179			br01610,ko00000,ko00001,ko00002,ko03011				Bacteria	1TPFT@1239,3F45I@33958,4HAEN@91061,COG0087@1,COG0087@2	NA|NA|NA	J	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
PAKBJLMI_01878	272621.LBA0292	4.6e-106	390.6	Lactobacillaceae	rplD	GO:0001130,GO:0001217,GO:0003674,GO:0003676,GO:0003700,GO:0003723,GO:0003735,GO:0004857,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005844,GO:0005886,GO:0006355,GO:0006412,GO:0006417,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008428,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015934,GO:0016020,GO:0016043,GO:0017148,GO:0019219,GO:0019222,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0030234,GO:0030312,GO:0030371,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032069,GO:0032074,GO:0032268,GO:0032269,GO:0032991,GO:0032993,GO:0034248,GO:0034249,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042788,GO:0043043,GO:0043086,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045182,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050790,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0051252,GO:0051253,GO:0051336,GO:0051346,GO:0060255,GO:0060698,GO:0060699,GO:0060700,GO:0060701,GO:0060702,GO:0065003,GO:0065007,GO:0065009,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0080090,GO:0097159,GO:0098772,GO:0140110,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1902679,GO:1903506,GO:1903507,GO:1990904,GO:2000112,GO:2000113,GO:2001141		ko:K02926,ko:K16193	ko03010,map03010	M00178			br01610,ko00000,ko00001,ko00002,ko03011				Bacteria	1TPGW@1239,3F3QD@33958,4HB01@91061,COG0088@1,COG0088@2	NA|NA|NA	J	Forms part of the polypeptide exit tunnel
PAKBJLMI_01879	272621.LBA0293	3.4e-46	190.7	Lactobacillaceae	rplW	GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904		ko:K02892	ko03010,map03010	M00178,M00179			br01610,ko00000,ko00001,ko00002,ko03011				Bacteria	1VA4W@1239,3F6Z2@33958,4HKCV@91061,COG0089@1,COG0089@2	NA|NA|NA	J	One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
PAKBJLMI_01880	272621.LBA0294	4.3e-155	553.9	Lactobacillaceae	rplB	GO:0000027,GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046872,GO:0046914,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904		ko:K02886	ko03010,map03010	M00178,M00179			br01610,ko00000,ko00001,ko00002,ko03011				Bacteria	1TP9X@1239,3F3XI@33958,4HAE8@91061,COG0090@1,COG0090@2	NA|NA|NA	J	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
PAKBJLMI_01881	1423767.BALU01000004_gene1271	9.4e-46	189.1	Lactobacillaceae	rpsS	GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904		ko:K02965	ko03010,map03010	M00178,M00179			br01610,ko00000,ko00001,ko00002,ko03011				Bacteria	1V6CX@1239,3F6XP@33958,4HIG0@91061,COG0185@1,COG0185@2	NA|NA|NA	J	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
PAKBJLMI_01882	272621.LBA0296	3.1e-54	217.6	Lactobacillaceae	rplV	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005844,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0030312,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042788,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904		ko:K02890	ko03010,map03010	M00178,M00179			br01610,ko00000,ko00001,ko00002,ko03011				Bacteria	1V6PU@1239,3F6K6@33958,4HIK2@91061,COG0091@1,COG0091@2	NA|NA|NA	J	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
PAKBJLMI_01883	272621.LBA0297	4.9e-109	400.6	Lactobacillaceae	rpsC	GO:0000028,GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030312,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904		ko:K02982	ko03010,map03010	M00178,M00179			br01610,ko00000,ko00001,ko00002,ko03011				Bacteria	1TPCP@1239,3F3Q8@33958,4HAUR@91061,COG0092@1,COG0092@2	NA|NA|NA	J	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
PAKBJLMI_01884	272621.LBA0298	6e-76	290.0	Lactobacillaceae	rplP	GO:0000027,GO:0000049,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904		ko:K02878	ko03010,map03010	M00178			br01610,ko00000,ko00001,ko00002,ko03011				Bacteria	1V1AY@1239,3F653@33958,4HFPN@91061,COG0197@1,COG0197@2	NA|NA|NA	J	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
PAKBJLMI_01885	1033837.WANG_0004	1.3e-25	121.7	Lactobacillaceae	rpmC	GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904		ko:K02904	ko03010,map03010	M00178,M00179			br01610,ko00000,ko00001,ko00002,ko03011				Bacteria	1VEME@1239,3F82Z@33958,4HNUP@91061,COG0255@1,COG0255@2	NA|NA|NA	J	Belongs to the universal ribosomal protein uL29 family
PAKBJLMI_01886	272621.LBA0300	3.8e-41	173.7	Lactobacillaceae	rpsQ	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904		ko:K02961	ko03010,map03010	M00178,M00179			br01610,ko00000,ko00001,ko00002,ko03011				Bacteria	1V9YC@1239,3F7FX@33958,4HKDN@91061,COG0186@1,COG0186@2	NA|NA|NA	J	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
PAKBJLMI_01887	272621.LBA0301	1.1e-59	235.7	Lactobacillaceae	rplN	GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0071704,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904		ko:K02874	ko03010,map03010	M00178,M00179			br01610,ko00000,ko00001,ko00002,ko03011				Bacteria	1V3N0@1239,3F6GT@33958,4HGYR@91061,COG0093@1,COG0093@2	NA|NA|NA	J	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
PAKBJLMI_01888	1423748.BALB01000002_gene318	4.4e-33	146.7	Lactobacillaceae	rplX	GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0030312,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904		ko:K02895	ko03010,map03010	M00178,M00179			br01610,ko00000,ko00001,ko00002,ko03011				Bacteria	1V9ZQ@1239,3F6X5@33958,4HKH9@91061,COG0198@1,COG0198@2	NA|NA|NA	J	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
PAKBJLMI_01889	272621.LBA0303	7.2e-95	353.2	Lactobacillaceae	rplE	GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904		ko:K02931	ko03010,map03010	M00178,M00179			br01610,ko00000,ko00001,ko00002,ko03011				Bacteria	1TPE0@1239,3F3Q7@33958,4HBAX@91061,COG0094@1,COG0094@2	NA|NA|NA	J	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
PAKBJLMI_01890	1423748.BALB01000002_gene316	8.9e-29	132.1	Lactobacillaceae	rpsN	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904		ko:K02954	ko03010,map03010	M00178,M00179			br01610,ko00000,ko00001,ko00002,ko03011				Bacteria	1VEF6@1239,3FB5M@33958,4HNKX@91061,COG0199@1,COG0199@2	NA|NA|NA	J	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PAKBJLMI_01891	272621.LBA0304	9.3e-68	262.7	Lactobacillaceae	rpsH	GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009894,GO:0009987,GO:0010467,GO:0010468,GO:0010608,GO:0015935,GO:0016043,GO:0019219,GO:0019222,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0031323,GO:0031329,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043487,GO:0043488,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0061013,GO:0065003,GO:0065007,GO:0065008,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903311,GO:1990904		ko:K02994	ko03010,map03010	M00178,M00179			br01610,ko00000,ko00001,ko00002,ko03011				Bacteria	1V3KK@1239,3F64E@33958,4HH32@91061,COG0096@1,COG0096@2	NA|NA|NA	J	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
PAKBJLMI_01892	272621.LBA0305	2.5e-92	344.7	Lactobacillaceae	rplF	GO:0000027,GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0030312,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070180,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904		ko:K02933	ko03010,map03010	M00178,M00179			br01610,ko00000,ko00001,ko00002,ko03011				Bacteria	1V1FC@1239,3F4G5@33958,4HFQD@91061,COG0097@1,COG0097@2	NA|NA|NA	J	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
PAKBJLMI_01893	272621.LBA0306	2.1e-55	221.5	Lactobacillaceae	rplR	GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904		ko:K02881	ko03010,map03010	M00178,M00179			br01610,ko00000,ko00001,ko00002,ko03011				Bacteria	1V6DM@1239,3F6KN@33958,4HIGF@91061,COG0256@1,COG0256@2	NA|NA|NA	J	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
PAKBJLMI_01894	272621.LBA0307	3.1e-84	317.8	Lactobacillaceae	rpsE	GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990145,GO:1990904		ko:K02988	ko03010,map03010	M00178,M00179			br01610,ko00000,ko00001,ko00002,ko03011				Bacteria	1V1B1@1239,3F3VY@33958,4HFN4@91061,COG0098@1,COG0098@2	NA|NA|NA	J	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
PAKBJLMI_01895	1423767.BALU01000004_gene1257	2.3e-24	117.5	Lactobacillaceae	rpmD	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904		ko:K02907	ko03010,map03010	M00178,M00179			br01610,ko00000,ko00001,ko00002,ko03011				Bacteria	1VEG4@1239,3F7ZU@33958,4HNHF@91061,COG1841@1,COG1841@2	NA|NA|NA	J	Ribosomal protein L30
PAKBJLMI_01896	272621.LBA0309	2e-71	275.0	Lactobacillaceae	rplO	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904		ko:K02876	ko03010,map03010	M00178,M00179			br01610,ko00000,ko00001,ko00002,ko03011				Bacteria	1V3KE@1239,3F675@33958,4HFPW@91061,COG0200@1,COG0200@2	NA|NA|NA	J	Binds to the 23S rRNA
PAKBJLMI_01897	272621.LBA0311	4e-237	827.0	Lactobacillaceae	secY	GO:0002790,GO:0003674,GO:0005048,GO:0005215,GO:0005488,GO:0005575,GO:0005576,GO:0005623,GO:0005886,GO:0005887,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006616,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0022857,GO:0022884,GO:0031224,GO:0031226,GO:0031522,GO:0032940,GO:0032978,GO:0032991,GO:0033036,GO:0033218,GO:0033365,GO:0034613,GO:0040007,GO:0042277,GO:0042886,GO:0042887,GO:0043952,GO:0044425,GO:0044459,GO:0044464,GO:0045047,GO:0045184,GO:0046903,GO:0046907,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061024,GO:0065002,GO:0070727,GO:0070972,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:1904680		ko:K03076	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335			ko00000,ko00001,ko00002,ko02044	3.A.5			Bacteria	1TPHB@1239,3F4FV@33958,4HAWH@91061,COG0201@1,COG0201@2	NA|NA|NA	U	The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
PAKBJLMI_01898	272621.LBA0312	2e-120	438.3	Lactobacillaceae	adk	GO:0003674,GO:0003824,GO:0004017,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576	2.7.4.3	ko:K00939	ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130	M00049	R00127,R01547,R11319	RC00002	ko00000,ko00001,ko00002,ko01000,ko04147			iHN637.CLJU_RS20110	Bacteria	1TP27@1239,3F3KB@33958,4HA89@91061,COG0563@1,COG0563@2	NA|NA|NA	F	Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
PAKBJLMI_01899	1423748.BALB01000002_gene307	8.4e-34	149.1	Lactobacillaceae	infA	GO:0001871,GO:0003674,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008150,GO:0009986,GO:0016020,GO:0030246,GO:0030247,GO:0030312,GO:0040007,GO:0043021,GO:0043022,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071944,GO:2001065		ko:K02518					ko00000,ko03012				Bacteria	1V9ZK@1239,3F7CW@33958,4HKF4@91061,COG0361@1,COG0361@2	NA|NA|NA	J	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
PAKBJLMI_01900	1293597.BN147_06995	2.7e-15	86.7	Lactobacillaceae	rpmJ	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904		ko:K02919	ko03010,map03010	M00178			br01610,ko00000,ko00001,ko00002,ko03011				Bacteria	1VK4F@1239,3F8TC@33958,4HR2X@91061,COG0257@1,COG0257@2	NA|NA|NA	J	Belongs to the bacterial ribosomal protein bL36 family
PAKBJLMI_01901	272621.LBA0315	4.2e-56	223.8	Lactobacillaceae	rpsM	GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0019538,GO:0022613,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904		ko:K02952	ko03010,map03010	M00178,M00179			br01610,ko00000,ko00001,ko00002,ko03011				Bacteria	1V3JH@1239,3F6GN@33958,4HGX6@91061,COG0099@1,COG0099@2	NA|NA|NA	J	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
PAKBJLMI_01902	272621.LBA0316	4e-63	247.3	Lactobacillaceae	rpsK	GO:0000028,GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0016043,GO:0016070,GO:0016072,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034660,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0048027,GO:0065003,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904		ko:K02948	ko03010,map03010	M00178,M00179			br01610,ko00000,ko00001,ko00002,ko03011				Bacteria	1V3IK@1239,3F67D@33958,4HH2T@91061,COG0100@1,COG0100@2	NA|NA|NA	J	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
PAKBJLMI_01903	272621.LBA0317	8.1e-171	606.3	Lactobacillaceae	rpoA	GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576	2.7.7.6	ko:K03040	ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020	M00183	R00435,R00441,R00442,R00443	RC02795	br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400				Bacteria	1TPR8@1239,3F3W6@33958,4H9R1@91061,COG0202@1,COG0202@2	NA|NA|NA	K	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PAKBJLMI_01904	272621.LBA0318	8.2e-61	239.6	Lactobacillaceae	rplQ	GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0030312,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904		ko:K02879,ko:K16193	ko03010,map03010	M00178			br01610,ko00000,ko00001,ko00002,ko03011				Bacteria	1V6JQ@1239,3F6GJ@33958,4HGX2@91061,COG0203@1,COG0203@2	NA|NA|NA	J	Ribosomal protein L17
PAKBJLMI_01905	272621.LBA0319	2.8e-154	551.2	Lactobacillaceae	ecfA1	GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006820,GO:0006855,GO:0008150,GO:0008509,GO:0008514,GO:0015075,GO:0015238,GO:0015711,GO:0015893,GO:0016020,GO:0022857,GO:0032217,GO:0032218,GO:0034220,GO:0035461,GO:0042221,GO:0042493,GO:0044464,GO:0050896,GO:0051179,GO:0051180,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0090482,GO:0098656		ko:K16784,ko:K16786,ko:K16787	ko02010,map02010	M00581,M00582			ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.25,3.A.1.25.1,3.A.1.28,3.A.1.29,3.A.1.30,3.A.1.31,3.A.1.32,3.A.1.33,3.A.1.35			Bacteria	1TPH8@1239,3F3VD@33958,4H9R8@91061,COG1122@1,COG1122@2	NA|NA|NA	P	ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PAKBJLMI_01906	272621.LBA0320	2.4e-161	574.7	Lactobacillaceae	ecfA	GO:0000166,GO:0003674,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006820,GO:0006855,GO:0008144,GO:0008150,GO:0008509,GO:0008514,GO:0015075,GO:0015238,GO:0015711,GO:0015893,GO:0016020,GO:0017076,GO:0022857,GO:0030554,GO:0032217,GO:0032218,GO:0032553,GO:0032555,GO:0032559,GO:0034220,GO:0035461,GO:0035639,GO:0036094,GO:0042221,GO:0042493,GO:0043167,GO:0043168,GO:0044464,GO:0050896,GO:0051179,GO:0051180,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0090482,GO:0097159,GO:0097367,GO:0098656,GO:1901265,GO:1901363	3.6.3.55	ko:K02068,ko:K06857,ko:K16784,ko:K16786,ko:K16787	ko02010,map02010	M00186,M00211,M00581,M00582	R10531	RC00002	ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.25,3.A.1.25.1,3.A.1.28,3.A.1.29,3.A.1.30,3.A.1.31,3.A.1.32,3.A.1.33,3.A.1.35,3.A.1.6.2,3.A.1.6.4			Bacteria	1TPH8@1239,3F48E@33958,4HA7T@91061,COG1122@1,COG1122@2	NA|NA|NA	P	ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PAKBJLMI_01907	272621.LBA0321	9.7e-141	506.1	Lactobacillaceae	ecfT	GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006820,GO:0006855,GO:0008150,GO:0008509,GO:0008514,GO:0015075,GO:0015238,GO:0015711,GO:0015893,GO:0016020,GO:0022857,GO:0032217,GO:0032218,GO:0034220,GO:0035461,GO:0042221,GO:0042493,GO:0044464,GO:0050896,GO:0051179,GO:0051180,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0090482,GO:0098656		ko:K02008,ko:K16783,ko:K16785	ko02010,map02010	M00245,M00246,M00581,M00582			ko00000,ko00001,ko00002,ko02000	3.A.1.18,3.A.1.22,3.A.1.23,3.A.1.25,3.A.1.25.1,3.A.1.28,3.A.1.29,3.A.1.30,3.A.1.31,3.A.1.32,3.A.1.33,3.A.1.35			Bacteria	1TQ0E@1239,3F3UW@33958,4H9VT@91061,COG0619@1,COG0619@2	NA|NA|NA	U	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PAKBJLMI_01908	272621.LBA0322	3e-150	537.7	Lactobacillaceae	truA	GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360	5.4.99.12	ko:K06173					ko00000,ko01000,ko03016				Bacteria	1TQUY@1239,3F4KC@33958,4HCFI@91061,COG0101@1,COG0101@2	NA|NA|NA	J	Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
PAKBJLMI_01909	272621.LBA0323	5.9e-79	300.1	Lactobacillaceae	rplM	GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006417,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015934,GO:0016020,GO:0017148,GO:0019222,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0030312,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046872,GO:0046914,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0070180,GO:0071704,GO:0071944,GO:0080090,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904,GO:2000112,GO:2000113		ko:K02871	ko03010,map03010	M00178,M00179			br01610,ko00000,ko00001,ko00002,ko03011				Bacteria	1V3HX@1239,3F696@33958,4HG0I@91061,COG0102@1,COG0102@2	NA|NA|NA	J	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
PAKBJLMI_01910	272621.LBA0324	3.5e-67	260.8	Lactobacillaceae	rpsI	GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904		ko:K02996	ko03010,map03010	M00178,M00179			br01610,ko00000,ko00001,ko00002,ko03011				Bacteria	1V3MQ@1239,3F656@33958,4HH3B@91061,COG0103@1,COG0103@2	NA|NA|NA	J	Belongs to the universal ribosomal protein uS9 family
PAKBJLMI_01911	97137.C821_01424	2.8e-11	73.6	Lactobacillaceae													Bacteria	1TUPJ@1239,29GN5@1,303JU@2,3FAPD@33958,4II6B@91061	NA|NA|NA		
PAKBJLMI_01912	272621.LBA0336	2.5e-109	401.4	Lactobacillaceae	thiJ		2.7.11.1,3.5.1.124	ko:K03152,ko:K05520,ko:K12132					ko00000,ko01000,ko01001,ko01002				Bacteria	1V3UV@1239,3F3T7@33958,4IQYM@91061,COG0693@1,COG0693@2	NA|NA|NA	S	DJ-1/PfpI family
PAKBJLMI_01913	272621.LBA0337	2.5e-118	431.4	Lactobacillaceae			3.1.3.102,3.1.3.104,3.8.1.2	ko:K01560,ko:K07025,ko:K20862	ko00361,ko00625,ko00740,ko01100,ko01110,ko01120,map00361,map00625,map00740,map01100,map01110,map01120	M00125	R00548,R05287,R07280	RC00017,RC00697	ko00000,ko00001,ko00002,ko01000				Bacteria	1UJ7D@1239,3F5TW@33958,4IT3E@91061,COG1011@1,COG1011@2	NA|NA|NA	S	Haloacid dehalogenase-like hydrolase
PAKBJLMI_01914	272621.LBA0338	5.8e-111	407.1	Lactobacillaceae				ko:K07090					ko00000				Bacteria	1VR9G@1239,3F3TR@33958,4HV4W@91061,COG0730@1,COG0730@2	NA|NA|NA	S	membrane transporter protein
PAKBJLMI_01915	272621.LBA0339	4.7e-128	463.8	Lactobacillaceae	pgm3		5.4.2.11	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	M00001,M00002,M00003	R01518	RC00536	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147				Bacteria	1TQF1@1239,3F4RY@33958,4I2XH@91061,COG0406@1,COG0406@2	NA|NA|NA	G	Belongs to the phosphoglycerate mutase family
PAKBJLMI_01916	272621.LBA0340	2.1e-163	581.6	Lactobacillaceae	czcD			ko:K16264					ko00000,ko02000	2.A.4.1			Bacteria	1TR92@1239,3F4KJ@33958,4HBCQ@91061,COG1230@1,COG1230@2	NA|NA|NA	P	cation diffusion facilitator family transporter
PAKBJLMI_01917	891391.LAC30SC_01680	2.2e-19	100.9	Lactobacillaceae													Bacteria	1U6P8@1239,29PJE@1,30AHJ@2,3F88U@33958,4IGG9@91061	NA|NA|NA		
PAKBJLMI_01918	272621.LBA0341	2.4e-80	304.7	Lactobacillaceae	gpmA	GO:0003674,GO:0003824,GO:0004619,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006109,GO:0006139,GO:0006140,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009894,GO:0009987,GO:0010675,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016866,GO:0016868,GO:0017144,GO:0018130,GO:0019219,GO:0019220,GO:0019222,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0031323,GO:0031329,GO:0032787,GO:0034248,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0043455,GO:0043456,GO:0043470,GO:0043471,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046538,GO:0046700,GO:0046939,GO:0050789,GO:0050794,GO:0051171,GO:0051174,GO:0051186,GO:0051188,GO:0051193,GO:0051196,GO:0055086,GO:0060255,GO:0062012,GO:0065007,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0080090,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1902031	5.4.2.11	ko:K01834	ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230	M00001,M00002,M00003	R01518	RC00536	ko00000,ko00001,ko00002,ko01000,ko04131,ko04147				Bacteria	1V2UT@1239,3F443@33958,4HGRK@91061,COG0588@1,COG0588@2	NA|NA|NA	G	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PAKBJLMI_01919	272621.LBA0342	6.4e-184	649.8	Lactobacillaceae													Bacteria	1TQKR@1239,3F51A@33958,4HF9B@91061,COG4639@1,COG4639@2	NA|NA|NA	S	AAA domain
PAKBJLMI_01920	272621.LBA0343	1.9e-266	924.5	Lactobacillaceae	pepC	GO:0000096,GO:0000098,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006508,GO:0006520,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008234,GO:0009056,GO:0009063,GO:0009636,GO:0009987,GO:0016054,GO:0016787,GO:0019538,GO:0019752,GO:0042221,GO:0043170,GO:0043418,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044273,GO:0044281,GO:0044282,GO:0044424,GO:0044464,GO:0046395,GO:0050667,GO:0050896,GO:0070011,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606	3.4.22.40	ko:K01372					ko00000,ko01000,ko01002				Bacteria	1TRJN@1239,3F49B@33958,4HBZ9@91061,COG3579@1,COG3579@2	NA|NA|NA	E	Peptidase C1-like family
PAKBJLMI_01921	272621.LBA0344	7e-52	209.5	Lactobacillaceae													Bacteria	1U6EY@1239,2BRXH@1,32KXS@2,3F7RT@33958,4IG6S@91061	NA|NA|NA		
PAKBJLMI_01922	272621.LBA0345	9.5e-103	379.4	Lactobacillaceae	dut	GO:0000287,GO:0003674,GO:0003824,GO:0004170,GO:0005488,GO:0006139,GO:0006220,GO:0006221,GO:0006226,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009141,GO:0009143,GO:0009147,GO:0009149,GO:0009157,GO:0009162,GO:0009165,GO:0009166,GO:0009176,GO:0009177,GO:0009200,GO:0009204,GO:0009211,GO:0009213,GO:0009219,GO:0009221,GO:0009223,GO:0009262,GO:0009263,GO:0009264,GO:0009265,GO:0009394,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046078,GO:0046080,GO:0046081,GO:0046385,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0047429,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0072529,GO:0090407,GO:1901135,GO:1901136,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576	3.6.1.23,4.1.1.36,6.3.2.5	ko:K01520,ko:K13038	ko00240,ko00770,ko00983,ko01100,map00240,map00770,map00983,map01100	M00053,M00120	R02100,R03269,R04231,R11896	RC00002,RC00064,RC00090,RC00822	ko00000,ko00001,ko00002,ko01000,ko03400				Bacteria	1V6HX@1239,3F65D@33958,4HIZ3@91061,COG0756@1,COG0756@2	NA|NA|NA	F	dUTP diphosphatase
PAKBJLMI_01923	272621.LBA0346	9.2e-256	889.0	Lactobacillaceae	radA			ko:K04485					ko00000,ko03400				Bacteria	1TQ7Y@1239,3F3W8@33958,4H9YC@91061,COG1066@1,COG1066@2	NA|NA|NA	O	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
PAKBJLMI_01924	272621.LBA0347	9.3e-278	962.2	Lactobacillaceae	gltX	GO:0001871,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009986,GO:0030246,GO:0030247,GO:0044424,GO:0044464,GO:2001065	6.1.1.17,6.1.1.24	ko:K01885,ko:K09698	ko00860,ko00970,ko01100,ko01110,ko01120,map00860,map00970,map01100,map01110,map01120	M00121,M00359,M00360	R03651,R05578	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko02048,ko03016			iSB619.SA_RS02860	Bacteria	1TPJC@1239,3F3PR@33958,4HAKH@91061,COG0008@1,COG0008@2	NA|NA|NA	J	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
PAKBJLMI_01925	272621.LBA0348	6.8e-278	962.6	Lactobacillaceae	cysS	GO:0000166,GO:0001871,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009986,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030246,GO:0030247,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:2001065	6.1.1.16,6.3.1.13	ko:K01883,ko:K15526	ko00970,map00970	M00359,M00360	R03650	RC00055,RC00523	ko00000,ko00001,ko00002,ko01000,ko01007,ko03016			iECUMN_1333.ECUMN_0566,iJN746.PP_2905	Bacteria	1TP9D@1239,3F4K7@33958,4HA6D@91061,COG0215@1,COG0215@2	NA|NA|NA	J	Belongs to the class-I aminoacyl-tRNA synthetase family
PAKBJLMI_01926	272621.LBA0349	2.3e-75	288.1	Lactobacillaceae	mrnC	GO:0003674,GO:0003824,GO:0004518,GO:0004540,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016787,GO:0016788,GO:0022613,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0140098,GO:1901360		ko:K11145					ko00000,ko01000,ko03009				Bacteria	1VA5V@1239,3F6HS@33958,4HIM3@91061,COG1939@1,COG1939@2	NA|NA|NA	J	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
PAKBJLMI_01927	272621.LBA0350	2e-140	505.0	Lactobacillaceae	rlmB	GO:0000154,GO:0000451,GO:0000453,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070039,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360	2.1.1.185	ko:K03218,ko:K03437,ko:K12952					ko00000,ko01000,ko03009,ko03016	3.A.3.23			Bacteria	1TP9G@1239,3F3TD@33958,4HBBI@91061,COG0566@1,COG0566@2	NA|NA|NA	J	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PAKBJLMI_01928	272621.LBA0351	3.5e-94	350.9	Lactobacillaceae	sigH			ko:K03088,ko:K03091,ko:K12296	ko02020,ko02024,map02020,map02024				ko00000,ko00001,ko03000,ko03021				Bacteria	1VG7U@1239,3F8D5@33958,4HNKD@91061,COG1595@1,COG1595@2	NA|NA|NA	K	Belongs to the sigma-70 factor family
PAKBJLMI_01929	272621.LBA0352	2.2e-34	151.0	Lactobacillaceae													Bacteria	1U6KC@1239,29PH8@1,30AFD@2,3F83D@33958,4IGD6@91061	NA|NA|NA		
PAKBJLMI_01930	272621.LBA0353	3.5e-114	417.5	Lactobacillaceae													Bacteria	1VG2M@1239,2ERDT@1,33IZD@2,3F9UY@33958,4IHHB@91061	NA|NA|NA		
PAKBJLMI_01931	272621.LBA0354	3.7e-287	993.4	Lactobacillaceae	gntK		2.7.1.12,2.7.1.17	ko:K00851,ko:K00854	ko00030,ko00040,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00040,map01100,map01110,map01120,map01130,map01200	M00014	R01639,R01737	RC00002,RC00017,RC00538	ko00000,ko00001,ko00002,ko01000				Bacteria	1TQ1I@1239,3F4R2@33958,4H9W6@91061,COG1070@1,COG1070@2	NA|NA|NA	G	Belongs to the FGGY kinase family
PAKBJLMI_01932	272621.LBA0355	8.1e-173	612.8	Lactobacillaceae													Bacteria	1TQDS@1239,3F5U3@33958,4I2K1@91061,COG2207@1,COG2207@2	NA|NA|NA	K	helix_turn_helix, arabinose operon control protein
PAKBJLMI_01933	272621.LBA0356	0.0	1167.1	Lactobacillaceae	dxs	GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008144,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0008661,GO:0009058,GO:0009240,GO:0009987,GO:0016740,GO:0016744,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0019842,GO:0030145,GO:0030975,GO:0032787,GO:0036094,GO:0040007,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046490,GO:0046872,GO:0046914,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901363,GO:1901576,GO:1901681	2.2.1.7	ko:K01662	ko00730,ko00900,ko01100,ko01110,ko01130,map00730,map00900,map01100,map01110,map01130	M00096	R05636	RC00032	ko00000,ko00001,ko00002,ko01000				Bacteria	1TP37@1239,3F4RN@33958,4H9QW@91061,COG1154@1,COG1154@2	NA|NA|NA	H	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
PAKBJLMI_01934	272621.LBA0357	7.8e-24	115.5	Lactobacillaceae	secE	GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0008150,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0040007,GO:0044425,GO:0044459,GO:0044464,GO:0071944		ko:K03073	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335			ko00000,ko00001,ko00002,ko02044	3.A.5.1,3.A.5.2			Bacteria	1VK48@1239,3F86Y@33958,4HR1W@91061,COG0690@1,COG0690@2	NA|NA|NA	U	Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
PAKBJLMI_01935	272621.LBA0358	6.2e-102	376.7	Lactobacillaceae	nusG	GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:1903506,GO:2000112,GO:2001141		ko:K02601					ko00000,ko03009,ko03021				Bacteria	1TR3P@1239,3F55W@33958,4HAJA@91061,COG0250@1,COG0250@2	NA|NA|NA	K	Participates in transcription elongation, termination and antitermination
PAKBJLMI_01936	272621.LBA0359	6.9e-69	266.5	Lactobacillaceae	rplK	GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0006950,GO:0006996,GO:0007154,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009267,GO:0009605,GO:0009987,GO:0009991,GO:0010467,GO:0015934,GO:0015968,GO:0016043,GO:0019538,GO:0019843,GO:0022411,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0030312,GO:0031667,GO:0031668,GO:0031669,GO:0032984,GO:0032991,GO:0033554,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0042594,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050896,GO:0051716,GO:0065003,GO:0070925,GO:0071496,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904		ko:K02867	ko03010,map03010	M00178,M00179			br01610,ko00000,ko00001,ko00002,ko03011				Bacteria	1V1BS@1239,3F64I@33958,4HFQ0@91061,COG0080@1,COG0080@2	NA|NA|NA	J	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
PAKBJLMI_01937	272621.LBA0360	4.2e-124	450.7	Lactobacillaceae	rplA	GO:0000027,GO:0000470,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006417,GO:0006446,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015934,GO:0016020,GO:0016043,GO:0016070,GO:0016072,GO:0017148,GO:0019222,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0030312,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045947,GO:0046483,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065003,GO:0065007,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0080090,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904,GO:2000112,GO:2000113		ko:K02863	ko03010,map03010	M00178,M00179			br01610,ko00000,ko00001,ko00002,ko03011				Bacteria	1TPTS@1239,3F3VQ@33958,4HAK4@91061,COG0081@1,COG0081@2	NA|NA|NA	J	Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
PAKBJLMI_01938	272621.LBA0361	1.5e-158	565.5	Lactobacillaceae	pstS	GO:0003674,GO:0005488,GO:0006810,GO:0006811,GO:0006817,GO:0006820,GO:0008150,GO:0015698,GO:0042301,GO:0043167,GO:0043168,GO:0051179,GO:0051234		ko:K02040	ko02010,ko02020,ko05152,map02010,map02020,map05152	M00222			ko00000,ko00001,ko00002,ko02000	3.A.1.7			Bacteria	1TQ5X@1239,3F4ER@33958,4HBEB@91061,COG0226@1,COG0226@2	NA|NA|NA	P	Phosphate
PAKBJLMI_01939	272621.LBA0362	5.2e-176	623.6	Lactobacillaceae	pstC	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944		ko:K02037	ko02010,map02010	M00222			ko00000,ko00001,ko00002,ko02000	3.A.1.7			Bacteria	1TSPP@1239,3F3NI@33958,4HC9H@91061,COG0573@1,COG0573@2	NA|NA|NA	P	probably responsible for the translocation of the substrate across the membrane
PAKBJLMI_01940	272621.LBA0363	2.6e-155	554.7	Lactobacillaceae	pstA	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944		ko:K02038	ko02010,map02010	M00222			ko00000,ko00001,ko00002,ko02000	3.A.1.7			Bacteria	1TP74@1239,3F412@33958,4HAKF@91061,COG0581@1,COG0581@2	NA|NA|NA	P	Phosphate transport system permease protein PstA
PAKBJLMI_01941	272621.LBA0364	4.2e-144	517.3	Lactobacillaceae	pstB		3.6.3.27	ko:K02036	ko02010,map02010	M00222			ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.7		iLJ478.TM1261	Bacteria	1TP1M@1239,3F3SY@33958,4HAB1@91061,COG1117@1,COG1117@2	NA|NA|NA	P	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PAKBJLMI_01942	272621.LBA0365	7e-141	506.5	Lactobacillaceae	pstB		3.6.3.27	ko:K02036	ko02010,map02010	M00222			ko00000,ko00001,ko00002,ko01000,ko02000	3.A.1.7		iLJ478.TM1261	Bacteria	1TP1M@1239,3F3SY@33958,4HAB1@91061,COG1117@1,COG1117@2	NA|NA|NA	P	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PAKBJLMI_01943	272621.LBA0366	2e-118	431.8	Lactobacillaceae	phoU			ko:K02039					ko00000				Bacteria	1URN3@1239,3F46W@33958,4HEU9@91061,COG0704@1,COG0704@2	NA|NA|NA	P	Plays a role in the regulation of phosphate uptake
PAKBJLMI_01944	272621.LBA0367	2.2e-210	738.0	Lactobacillaceae	yfdV	GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944		ko:K07088					ko00000			iECW_1372.ECW_m2605,iWFL_1372.ECW_m2605	Bacteria	1VDS9@1239,3F5JF@33958,4HQT5@91061,COG0679@1,COG0679@2	NA|NA|NA	S	Membrane transport protein
PAKBJLMI_01945	525365.HMPREF0548_2114	2.2e-10	72.0	Lactobacillaceae													Bacteria	1U634@1239,29P3T@1,30A20@2,3F6XE@33958,4IFSD@91061	NA|NA|NA		
PAKBJLMI_01946	272621.LBA0369	1.6e-83	315.5	Lactobacillaceae	rplJ	GO:0003674,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006417,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015934,GO:0016020,GO:0017148,GO:0019222,GO:0019538,GO:0022625,GO:0022626,GO:0030312,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0034641,GO:0034645,GO:0040007,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044877,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0071704,GO:0071944,GO:0080090,GO:1901564,GO:1901566,GO:1901576,GO:1990904,GO:2000112,GO:2000113		ko:K02864,ko:K02935	ko03010,map03010	M00178,M00179			br01610,ko00000,ko00001,ko00002,ko03011				Bacteria	1V3JJ@1239,3F4S4@33958,4HH0N@91061,COG0244@1,COG0244@2	NA|NA|NA	J	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
PAKBJLMI_01947	272621.LBA0370	2.2e-47	194.9	Lactobacillaceae	rplL			ko:K02935	ko03010,map03010	M00178			br01610,ko00000,ko00001,ko00002,ko03011				Bacteria	1V6EI@1239,3F6YA@33958,4HIGQ@91061,COG0222@1,COG0222@2	NA|NA|NA	J	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
PAKBJLMI_01948	272621.LBA0371	1.5e-123	449.1	Lactobacillaceae	potC		2.1.1.172,2.1.1.80,3.1.1.61	ko:K00564,ko:K02026,ko:K10716,ko:K11070,ko:K13924,ko:K14393	ko02010,ko02020,ko02030,map02010,map02020,map02030	M00207,M00299,M00506	R07234	RC00003	ko00000,ko00001,ko00002,ko01000,ko02000,ko02022,ko02035,ko03009	1.A.1.1,1.A.1.13,1.A.1.17,1.A.1.24,1.A.1.25,1.A.1.6,2.A.21.7,3.A.1.1,3.A.1.11.1			Bacteria	1UI94@1239,3FBT5@33958,4HFS7@91061,COG1340@1,COG1340@2	NA|NA|NA	J	Ion channel
PAKBJLMI_01949	272621.LBA0373	6.4e-116	423.3	Lactobacillaceae	rsmC	GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016740,GO:0016741,GO:0032259,GO:0044424,GO:0044464	2.1.1.172	ko:K00564			R07234	RC00003	ko00000,ko01000,ko03009				Bacteria	1V1BG@1239,3F4NU@33958,4HHCA@91061,COG2813@1,COG2813@2	NA|NA|NA	J	Methyltransferase
PAKBJLMI_01950	748671.LCRIS_00374	1.4e-23	114.8	Lactobacillaceae													Bacteria	1U6M6@1239,2CCGD@1,30AG2@2,3F851@33958,4IGE1@91061	NA|NA|NA		
PAKBJLMI_01951	272621.LBA0375	1.2e-91	342.4	Lactobacillaceae	tadA	GO:0002097,GO:0002100,GO:0006139,GO:0006382,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016553,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360	3.5.4.33	ko:K11991			R10223	RC00477	ko00000,ko01000,ko03016				Bacteria	1V3HZ@1239,3F6IS@33958,4HH7S@91061,COG0590@1,COG0590@2	NA|NA|NA	F	Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
PAKBJLMI_01952	272621.LBA0376	0.0	1139.8	Lactobacillaceae	dnaX	GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901576	2.7.7.7	ko:K02341,ko:K02343	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400				Bacteria	1TPS9@1239,3F3P2@33958,4HAUE@91061,COG2812@1,COG2812@2	NA|NA|NA	L	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PAKBJLMI_01953	272621.LBA0377	3.5e-224	783.9	Lactobacillaceae	tnpB			ko:K07496					ko00000				Bacteria	1TRNY@1239,3F431@33958,4HBKP@91061,COG0675@1,COG0675@2	NA|NA|NA	L	Putative transposase DNA-binding domain
PAKBJLMI_01954	272621.LBA0378	2e-42	178.3	Lactobacillaceae	yaaK			ko:K09747					ko00000				Bacteria	1VA1S@1239,3F7F3@33958,4HKH3@91061,COG0718@1,COG0718@2	NA|NA|NA	S	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
PAKBJLMI_01955	272621.LBA0379	3.7e-108	397.5	Lactobacillaceae	recR	GO:0000731,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009987,GO:0018130,GO:0019438,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:1901360,GO:1901362,GO:1901576		ko:K06187	ko03440,map03440				ko00000,ko00001,ko03400				Bacteria	1TR87@1239,3F4JQ@33958,4HAZR@91061,COG0353@1,COG0353@2	NA|NA|NA	L	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
PAKBJLMI_01956	272621.LBA0380	1.1e-34	152.1	Lactobacillaceae													Bacteria	1U6E6@1239,29PC5@1,30AAD@2,3F7PR@33958,4IG5Y@91061	NA|NA|NA	S	Protein of unknown function (DUF2508)
PAKBJLMI_01957	272621.LBA0381	2.3e-116	424.9	Lactobacillaceae	tmk	GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576	2.7.4.9	ko:K00943	ko00240,ko01100,map00240,map01100	M00053	R02094,R02098	RC00002	ko00000,ko00001,ko00002,ko01000			iSB619.SA_RS02535	Bacteria	1V1HE@1239,3F4JR@33958,4HGWR@91061,COG0125@1,COG0125@2	NA|NA|NA	F	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
PAKBJLMI_01958	272621.LBA0382	5.8e-52	209.9	Lactobacillaceae	yaaQ												Bacteria	1V6NI@1239,3F6VW@33958,4HIHA@91061,COG3870@1,COG3870@2	NA|NA|NA	S	Cyclic-di-AMP receptor
PAKBJLMI_01959	272621.LBA0383	2.6e-155	554.7	Lactobacillaceae	holB		2.7.7.7	ko:K02341	ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440	M00260	R00375,R00376,R00377,R00378	RC02795	ko00000,ko00001,ko00002,ko01000,ko03032,ko03400				Bacteria	1TRVS@1239,3F50D@33958,4HA3T@91061,COG0470@1,COG0470@2	NA|NA|NA	L	DNA polymerase III
PAKBJLMI_01960	272621.LBA0384	3e-60	237.7	Lactobacillaceae	yabA	GO:0003674,GO:0005488,GO:0005515,GO:0042802											Bacteria	1VA1F@1239,3F864@33958,4HKND@91061,COG4467@1,COG4467@2	NA|NA|NA	L	Involved in initiation control of chromosome replication
PAKBJLMI_01961	272621.LBA0385	1.1e-81	309.3	Lactobacillaceae	rsmI	GO:0000154,GO:0000451,GO:0000453,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044464,GO:0046483,GO:0070677,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0140098,GO:0140102,GO:1901360	2.1.1.198	ko:K07056					ko00000,ko01000,ko03009				Bacteria	1TP6U@1239,3F4AI@33958,4HAH8@91061,COG0313@1,COG0313@2	NA|NA|NA	H	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
PAKBJLMI_01962	272621.LBA0385	5.3e-50	203.4	Lactobacillaceae	rsmI	GO:0000154,GO:0000451,GO:0000453,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044464,GO:0046483,GO:0070677,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0140098,GO:0140102,GO:1901360	2.1.1.198	ko:K07056					ko00000,ko01000,ko03009				Bacteria	1TP6U@1239,3F4AI@33958,4HAH8@91061,COG0313@1,COG0313@2	NA|NA|NA	H	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
PAKBJLMI_01963	272621.LBA0386	9.6e-143	512.7	Lactobacillaceae	fat		3.1.2.21	ko:K01071	ko00061,ko01100,map00061,map01100		R04014,R08157,R08158	RC00014,RC00039	ko00000,ko00001,ko01000,ko01004				Bacteria	1V3RB@1239,3F41B@33958,4HHJ4@91061,COG3884@1,COG3884@2	NA|NA|NA	I	Acyl-ACP thioesterase
PAKBJLMI_01964	272621.LBA0387	5.2e-87	327.0	Lactobacillaceae													Bacteria	1VGAX@1239,2DNHW@1,32XKY@2,3FBRP@33958,4ISA7@91061	NA|NA|NA	S	ECF transporter, substrate-specific component
PAKBJLMI_01965	272621.LBA0388	1.4e-133	482.3	Lactobacillaceae	yeaZ	GO:0002949,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006508,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0019538,GO:0034470,GO:0034641,GO:0034660,GO:0042802,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070011,GO:0070525,GO:0071704,GO:0090304,GO:0140096,GO:1901360,GO:1901564	2.3.1.234	ko:K01409,ko:K14742			R10648	RC00070,RC00416	ko00000,ko01000,ko03016				Bacteria	1V4YX@1239,3F3WV@33958,4HHD7@91061,COG1214@1,COG1214@2	NA|NA|NA	O	Universal bacterial protein YeaZ
PAKBJLMI_01966	272621.LBA0389	3.3e-106	391.0	Lactobacillaceae	rimI		2.3.1.128	ko:K03789					ko00000,ko01000,ko03009				Bacteria	1V6KU@1239,3F522@33958,4HIKU@91061,COG0454@1,COG0456@2	NA|NA|NA	K	Ribosomal-protein-alanine acetyltransferase
PAKBJLMI_01967	272621.LBA0390	1.1e-197	695.7	Lactobacillaceae	tsaD	GO:0000287,GO:0000408,GO:0002949,GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005488,GO:0005506,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006508,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0019538,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0070011,GO:0070525,GO:0071704,GO:0090304,GO:0140030,GO:0140032,GO:0140096,GO:1901360,GO:1901564	2.3.1.234	ko:K01409,ko:K03070	ko02024,ko03060,ko03070,map02024,map03060,map03070	M00335	R10648	RC00070,RC00416	ko00000,ko00001,ko00002,ko01000,ko02044,ko03016	3.A.5.1,3.A.5.10,3.A.5.2,3.A.5.4			Bacteria	1TQDR@1239,3F4AX@33958,4HANB@91061,COG0533@1,COG0533@2	NA|NA|NA	J	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
PAKBJLMI_01968	272621.LBA0391	1.3e-131	475.7	Lactobacillaceae	deoC	GO:0003674,GO:0003824,GO:0004139,GO:0005975,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009166,GO:0009262,GO:0009264,GO:0009987,GO:0016052,GO:0016829,GO:0016830,GO:0016832,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576	4.1.2.4	ko:K01619	ko00030,map00030		R01066	RC00436,RC00437	ko00000,ko00001,ko01000				Bacteria	1TPAJ@1239,3FCCC@33958,4HF5U@91061,COG0274@1,COG0274@2	NA|NA|NA	F	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
PAKBJLMI_01969	272621.LBA0392	2.1e-182	644.8	Lactobacillaceae				ko:K22230	ko00562,ko01120,map00562,map01120		R09954	RC00182	ko00000,ko00001,ko01000				Bacteria	1TQSS@1239,3F4U8@33958,4HV6B@91061,COG0673@1,COG0673@2	NA|NA|NA	S	Oxidoreductase family, NAD-binding Rossmann fold
PAKBJLMI_01970	272621.LBA0393	4.9e-128	463.8	Lactobacillaceae	yegW			ko:K03710,ko:K11922					ko00000,ko03000				Bacteria	1TVMZ@1239,3F66Q@33958,4H9TD@91061,COG2188@1,COG2188@2	NA|NA|NA	K	UTRA
PAKBJLMI_01971	272621.LBA0394	6.5e-234	816.2	Lactobacillaceae	yfdE	GO:0003674,GO:0003824,GO:0008410,GO:0016740,GO:0016782,GO:0036412	2.8.3.16,2.8.3.19	ko:K07749,ko:K18702					ko00000,ko01000				Bacteria	1TP54@1239,3F4GS@33958,4HABI@91061,COG1804@1,COG1804@2	NA|NA|NA	C	Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
PAKBJLMI_01972	272621.LBA0395	4.3e-266	923.3	Lactobacillaceae	frc	GO:0003674,GO:0003824,GO:0008150,GO:0008410,GO:0009268,GO:0009628,GO:0009987,GO:0010447,GO:0016740,GO:0016782,GO:0033608,GO:0050896,GO:0051716,GO:0071214,GO:0071467,GO:0071468,GO:0104004	2.8.3.16,2.8.3.19	ko:K07749,ko:K18702					ko00000,ko01000			iUMNK88_1353.UMNK88_2972	Bacteria	1TP54@1239,3F4GS@33958,4HABI@91061,COG1804@1,COG1804@2	NA|NA|NA	C	Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
PAKBJLMI_01973	272621.LBA0396	0.0	1124.0	Lactobacillaceae	oxc	GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006082,GO:0008150,GO:0008152,GO:0008949,GO:0009056,GO:0009268,GO:0009628,GO:0009987,GO:0010447,GO:0016054,GO:0016829,GO:0016830,GO:0016831,GO:0017076,GO:0019752,GO:0019842,GO:0030554,GO:0030976,GO:0032553,GO:0032555,GO:0032559,GO:0033609,GO:0033611,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0043531,GO:0043648,GO:0043649,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0046872,GO:0048037,GO:0050662,GO:0050896,GO:0051716,GO:0071214,GO:0071467,GO:0071468,GO:0071704,GO:0097159,GO:0097367,GO:0104004,GO:1901265,GO:1901363,GO:1901575,GO:1901681	4.1.1.8	ko:K01577	ko00630,ko01100,map00630,map01100		R01908	RC00620	ko00000,ko00001,ko01000			iEcSMS35_1347.EcSMS35_2523,iNJ661.Rv0118c	Bacteria	1TQE8@1239,3F3R9@33958,4HBUS@91061,COG0028@1,COG0028@2	NA|NA|NA	EH	Belongs to the TPP enzyme family
PAKBJLMI_01974	272621.LBA0397	0.0	1187.2	Lactobacillaceae	uup			ko:K06158					ko00000,ko03012				Bacteria	1TPAX@1239,3F3QI@33958,4HBVV@91061,COG0488@1,COG0488@2	NA|NA|NA	S	ABC transporter, ATP-binding protein
PAKBJLMI_01975	272621.LBA0398	1.3e-111	409.1	Lactobacillaceae	rex			ko:K01926					ko00000,ko03000				Bacteria	1TSMR@1239,3F40G@33958,4HB7Q@91061,COG2344@1,COG2344@2	NA|NA|NA	K	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
PAKBJLMI_01976	272621.LBA0399	3.1e-29	134.0	Lactobacillaceae	scrR			ko:K02529,ko:K03484					ko00000,ko03000				Bacteria	1TT9H@1239,3FC5B@33958,4HDUY@91061,COG1609@1,COG1609@2	NA|NA|NA	K	helix_turn _helix lactose operon repressor
PAKBJLMI_01978	272621.LBA0401	8.2e-74	283.1	Lactobacillaceae	scrA		2.7.1.208,2.7.1.211,5.3.1.1	ko:K01803,ko:K02749,ko:K02750,ko:K02755,ko:K02756,ko:K02757,ko:K02808,ko:K02809,ko:K02810	ko00010,ko00051,ko00500,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko02060,map00010,map00051,map00500,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map02060	M00001,M00002,M00003,M00268,M00269,M00271	R00811,R01015,R04111	RC00017,RC00423,RC03206	ko00000,ko00001,ko00002,ko01000,ko02000,ko04147	4.A.1.1.10,4.A.1.1.16,4.A.1.1.4,4.A.1.1.8,4.A.1.2.1,4.A.1.2.10,4.A.1.2.11,4.A.1.2.12,4.A.1.2.2,4.A.1.2.5,4.A.1.2.6,4.A.1.2.9			Bacteria	1TP5X@1239,3F458@33958,4HA0I@91061,COG1263@1,COG1263@2,COG1264@1,COG1264@2,COG2190@1,COG2190@2	NA|NA|NA	G	phosphotransferase system
# 1863 queries scanned
# Total time (seconds): 4.62614893913
# Rate: 402.71 q/s