GCA_003094645.1 - 2 region(s)

Identified primary metabolite regions

QDIH01000002.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 2.1	Pyruvate2acetate-formate,Fumarate2succinate	SCFA	1,965	47,388	Pyruvate to acetate-formate E. coli	PFL_acetate	100%

QDIH01000028.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 28.1	Others_HGD_unassigned	Putative	1	19,910

No primary metabolite regions were found in these records:: QDIH01000001.1; QDIH01000003.1; QDIH01000004.1; QDIH01000005.1; QDIH01000006.1; QDIH01000007.1; QDIH01000008.1; QDIH01000009.1; QDIH01000010.1; QDIH01000011.1; QDIH01000012.1; QDIH01000013.1; QDIH01000014.1; QDIH01000015.1; QDIH01000016.1; QDIH01000017.1; QDIH01000018.1; QDIH01000019.1; QDIH01000020.1; QDIH01000021.1; QDIH01000022.1; QDIH01000023.1; QDIH01000024.1; QDIH01000025.1; QDIH01000026.1; QDIH01000027.1; QDIH01000029.1; QDIH01000030.1; QDIH01000031.1; QDIH01000032.1; QDIH01000033.1; QDIH01000034.1; QDIH01000035.1; QDIH01000036.1; QDIH01000037.1; QDIH01000038.1; QDIH01000039.1; QDIH01000040.1; QDIH01000041.1; QDIH01000042.1; QDIH01000043.1; QDIH01000044.1; QDIH01000045.1; QDIH01000046.1; QDIH01000047.1; QDIH01000048.1; QDIH01000049.1; QDIH01000050.1; QDIH01000051.1; QDIH01000052.1; QDIH01000053.1; QDIH01000054.1; QDIH01000055.1; QDIH01000056.1; QDIH01000057.1; QDIH01000058.1; QDIH01000059.1; QDIH01000060.1; QDIH01000061.1; QDIH01000062.1; QDIH01000063.1; QDIH01000064.1; QDIH01000065.1; QDIH01000066.1; QDIH01000067.1; QDIH01000068.1; QDIH01000069.1; QDIH01000070.1; QDIH01000071.1; QDIH01000072.1; QDIH01000073.1; QDIH01000074.1; QDIH01000075.1; QDIH01000076.1; QDIH01000077.1; QDIH01000078.1; QDIH01000079.1; QDIH01000080.1; QDIH01000082.1; QDIH01000083.1; QDIH01000084.1; QDIH01000086.1; QDIH01000087.1; QDIH01000088.1; QDIH01000089.1; QDIH01000090.1; QDIH01000091.1; QDIH01000092.1; QDIH01000093.1; QDIH01000097.1; QDIH01000098.1; QDIH01000099.1; QDIH01000101.1; QDIH01000103.1; QDIH01000104.1; QDIH01000105.1; QDIH01000107.1; QDIH01000108.1; QDIH01000109.1; QDIH01000112.1; QDIH01000113.1; QDIH01000116.1; QDIH01000117.1; QDIH01000118.1; QDIH01000119.1

Compact view

QDIH01000002.1 - Region 1 - Fumarate2succinate,Pyruvate2acetate-formate

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Location: 1,965 - 47,388 nt. (total: 45,424 nt) Show pHMM detection rules used

Pyruvate2acetate-formate: ((PFL_acetate1 or PFL_acetate2) and Radical_SAM)
Fumarate2succinate: (Succ_DH_flav_C and FAD_binding_2 and (Fer2_3 or Fer4_7 or SucD_FumR))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

QDIH01000028.1 - Region 1 - Others_HGD_unassigned

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Location: 1 - 19,910 nt. (total: 19,910 nt) Show pHMM detection rules used

Region on contig edge.

Others_HGD_unassigned: (minimum(1, [HAAA1, HG2B1, HG2B2, HGD-D, HleuD1, HleuD2, HleuS1, HleuS2, Lactoyl-CoA1, Lactoyl-CoA2]) and minimum(1, [ACP_syn_III, ACP_syn_III_C, AcetylCoA_hyd_C, AcetylCoA_hydro, Acyl-CoA_dh_1, Acyl-CoA_dh_2, AdoHcyase_NAD, AlaDh_PNT_C, BcrAD_BadFG, Biotin_lipoyl, Carboxyl_trans, CoA_trans, CoA_trans_230_acto, CoA_trans_6_Glutaconate, CoA_transf_3, ECH_1, ECH_2, ETF, ETF_alpha, FGGY_C, HCDH, HCDH_N, Hacid_dh, Hacid_dh_C, Mal_decarbox_Al, Peptidase_M22, Peptidase_M23, Thiolase_C, Thiolase_N, ketoacyl-synt]) and not (minimum(2, [AcetylCoA_hyd_C, BcrAD_BadFG, CoA_trans, CoA_trans_230_acto, Mal_decarbox_Al]) and Lactoyl-CoA2 and Lactoyl-CoA1) and not (minimum(4, [ACP_syn_III, ACP_syn_III_C, Acyl-CoA_dh_1, Acyl-CoA_dh_2, AlaDh_PNT_C, BcrAD_BadFG, ECH_1, ECH_2, ETF, ETF_alpha, HCDH, HCDH_N, Hacid_dh, Hacid_dh_C, IlvN, NAD_Gly3P_dh_N, Thiolase_C, Thiolase_N, ketoacyl-synt]) and HAAA1 and not HleuS1))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.