GCA_003129655.1 - 6 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

QFFS01000013.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 4.1	RaS-RiPP	31,486	49,997

QFFS01000014.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 5.1	lanthipeptide-class-i	9,832	33,885	lactocin S	RiPP:Lanthipeptide	10%

QFFS01000002.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 23.1	RRE-containing	1	20,373

QFFS01000004.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 35.1	RaS-RiPP	48,403	70,827	streptide	RiPP	100%

QFFS01000006.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 37.1	RiPP-like	86,369	100,554

QFFS01000008.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 39.1	NRPS-like	8,321	51,212	asukamycin	Polyketide:Type II	4%

Region	Type	From	To	Most similar known cluster	Similarity
Region 4.1	RaS-RiPP	31,486	49,997
Region 5.1	lanthipeptide-class-i	9,832	33,885	lactocin S	RiPP:Lanthipeptide	10%
Region 23.1	RRE-containing	1	20,373
Region 35.1	RaS-RiPP	48,403	70,827	streptide	RiPP	100%
Region 37.1	RiPP-like	86,369	100,554
Region 39.1	NRPS-like	8,321	51,212	asukamycin	Polyketide:Type II	4%

No secondary metabolite regions were found in these records:: QFFS01000010.1; QFFS01000011.1; QFFS01000012.1; QFFS01000015.1; QFFS01000016.1; QFFS01000017.1; QFFS01000018.1; QFFS01000019.1; QFFS01000001.1; QFFS01000020.1; QFFS01000021.1; QFFS01000022.1; QFFS01000023.1; QFFS01000024.1; QFFS01000026.1; QFFS01000027.1; QFFS01000028.1; QFFS01000029.1; QFFS01000030.1; QFFS01000031.1; QFFS01000032.1; QFFS01000033.1; QFFS01000034.1; QFFS01000035.1; QFFS01000036.1; QFFS01000037.1; QFFS01000038.1; QFFS01000039.1; QFFS01000040.1; QFFS01000041.1; QFFS01000003.1; QFFS01000005.1; QFFS01000007.1; QFFS01000009.1

Compact view

QFFS01000013.1 - Region 1 - RaS-RiPP

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Location: 31,486 - 49,997 nt. (total: 18,512 nt) Show pHMM detection rules used

Region on contig edge.

RaS-RiPP: (PF04055 and TIGR01716)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

QFFS01000014.1 - Region 1 - lanthipeptide-class-i

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Location: 9,832 - 33,885 nt. (total: 24,054 nt) Show pHMM detection rules used

lanthipeptide-class-i: ((LANC_like and (Lant_dehydr_N or Lant_dehydr_C)) and not (YcaO or TIGR03882))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Lanthipeptides

KnownClusterBlast

Lanthipeptide predictions

Lanthipeptides - No core peptides found.

Similar known gene clusters

Lanthipeptides

Core peptide predictions

No core peptides found.

QFFS01000002.1 - Region 1 - RRE-containing

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Location: 1 - 20,373 nt. (total: 20,373 nt) Show pHMM detection rules used

Region on contig edge.

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

QFFS01000004.1 - Region 1 - RaS-RiPP

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Location: 48,403 - 70,827 nt. (total: 22,425 nt) Show pHMM detection rules used

RaS-RiPP: (PF04055 and TIGR01716)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

QFFS01000006.1 - Region 1 - RiPP-like

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Location: 86,369 - 100,554 nt. (total: 14,186 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

QFFS01000008.1 - Region 1 - NRPS-like

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Location: 8,321 - 51,212 nt. (total: 42,892 nt) Show pHMM detection rules used

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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NRPS/PKS domains

KnownClusterBlast

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters