GCA_003174865.1 - 3 region(s)

Identified primary metabolite regions

QGHV01000037.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 91.1	TPP_AA_metabolism	Putative	1	21,290

QGHV01000038.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 92.1	Nitrate_reductase	E-MGC	4,487	21,058	Nitrate reductase E. coli	NIR	40%

QGHV01000008.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 138.1	pdu	SCFA-other	17,123	47,085	Propanediol degradation S. enterica	PDU	62%

Region	Type	Class	From	To	Most similar known cluster	Similarity
Region 91.1	TPP_AA_metabolism	Putative	1	21,290
Region 92.1	Nitrate_reductase	E-MGC	4,487	21,058	Nitrate reductase E. coli	NIR	40%
Region 138.1	pdu	SCFA-other	17,123	47,085	Propanediol degradation S. enterica	PDU	62%

No primary metabolite regions were found in these records:: QGHV01000001.1; QGHV01000010.1; QGHV01000100.1; QGHV01000101.1; QGHV01000102.1; QGHV01000103.1; QGHV01000104.1; QGHV01000105.1; QGHV01000106.1; QGHV01000107.1; QGHV01000108.1; QGHV01000109.1; QGHV01000011.1; QGHV01000110.1; QGHV01000111.1; QGHV01000112.1; QGHV01000113.1; QGHV01000114.1; QGHV01000115.1; QGHV01000116.1; QGHV01000117.1; QGHV01000118.1; QGHV01000119.1; QGHV01000012.1; QGHV01000120.1; QGHV01000121.1; QGHV01000122.1; QGHV01000123.1; QGHV01000124.1; QGHV01000125.1; QGHV01000126.1; QGHV01000127.1; QGHV01000128.1; QGHV01000129.1; QGHV01000013.1; QGHV01000130.1; QGHV01000131.1; QGHV01000132.1; QGHV01000133.1; QGHV01000134.1; QGHV01000135.1; QGHV01000136.1; QGHV01000137.1; QGHV01000138.1; QGHV01000139.1; QGHV01000014.1; QGHV01000140.1; QGHV01000141.1; QGHV01000142.1; QGHV01000143.1; QGHV01000144.1; QGHV01000145.1; QGHV01000146.1; QGHV01000147.1; QGHV01000148.1; QGHV01000149.1; QGHV01000015.1; QGHV01000150.1; QGHV01000151.1; QGHV01000152.1; QGHV01000153.1; QGHV01000154.1; QGHV01000155.1; QGHV01000156.1; QGHV01000157.1; QGHV01000158.1; QGHV01000159.1; QGHV01000016.1; QGHV01000017.1; QGHV01000018.1; QGHV01000019.1; QGHV01000002.1; QGHV01000020.1; QGHV01000021.1; QGHV01000022.1; QGHV01000023.1; QGHV01000024.1; QGHV01000025.1; QGHV01000026.1; QGHV01000027.1; QGHV01000028.1; QGHV01000029.1; QGHV01000003.1; QGHV01000030.1; QGHV01000031.1; QGHV01000032.1; QGHV01000033.1; QGHV01000034.1; QGHV01000035.1; QGHV01000036.1; QGHV01000039.1; QGHV01000004.1; QGHV01000040.1; QGHV01000041.1; QGHV01000042.1; QGHV01000043.1; QGHV01000044.1; QGHV01000045.1; QGHV01000046.1; QGHV01000047.1; QGHV01000048.1; QGHV01000049.1; QGHV01000005.1; QGHV01000050.1; QGHV01000051.1; QGHV01000052.1; QGHV01000053.1; QGHV01000054.1; QGHV01000055.1; QGHV01000056.1; QGHV01000057.1; QGHV01000058.1; QGHV01000059.1; QGHV01000006.1; QGHV01000060.1; QGHV01000061.1; QGHV01000062.1; QGHV01000063.1; QGHV01000064.1; QGHV01000065.1; QGHV01000066.1; QGHV01000067.1; QGHV01000068.1; QGHV01000069.1; QGHV01000007.1; QGHV01000070.1; QGHV01000071.1; QGHV01000072.1; QGHV01000073.1; QGHV01000074.1; QGHV01000075.1; QGHV01000076.1; QGHV01000077.1; QGHV01000078.1; QGHV01000079.1; QGHV01000080.1; QGHV01000081.1; QGHV01000082.1; QGHV01000083.1; QGHV01000084.1; QGHV01000085.1; QGHV01000086.1; QGHV01000087.1; QGHV01000088.1; QGHV01000089.1; QGHV01000009.1; QGHV01000090.1; QGHV01000091.1; QGHV01000092.1; QGHV01000093.1; QGHV01000094.1; QGHV01000095.1; QGHV01000096.1; QGHV01000097.1; QGHV01000098.1; QGHV01000099.1

Compact view

QGHV01000037.1 - Region 1 - TPP_AA_metabolism

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Location: 1 - 21,290 nt. (total: 21,290 nt) Show pHMM detection rules used

Region on contig edge.

TPP_AA_metabolism: (TPP_enzyme_C and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or Gly_8-9_TMA or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and minimum(2, [ALS_ss_C, AlaDh_PNT_C, Arginase, BKACE, BcrAD_BadFG, Beta_elim_lyase, CPSase_L_D2, Cys_Met_Meta_PP, ELFV_dehydrog, GRDB, Glu_syn_central, Glu_synthase, Gly_reductase, HAAA1, HG2B1, HG2B2, HGD-D, HleuD1, HleuD2, HleuS1, HleuS2, Homoserine_dh, ILVD_EDD, IlvC, Lactoyl-CoA1, Lactoyl-CoA2, Lyase_aromatic, MAAL_C, OKR_DC_1_5_lysine, OKR_DC_1_5_ornithine, OKR_DC_1_7_arginine, OKR_DC_1_C, OTCace, PALP, Proline_reductase, Sacchrp_dh_C, TPL, Thr_dehydrat_C, TnaA, Urocanase]) and not (POR or POR_N or PFOR_II))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

QGHV01000038.1 - Region 1 - Nitrate_reductase

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Location: 4,487 - 21,058 nt. (total: 16,572 nt) Show pHMM detection rules used

Region on contig edge.

Nitrate_reductase: (Nitr_red_bet_C and Nitrate_red_del and Nitrate_red_gam and Molybdopterin and minimum(2, [Fer4_11, Molybdopterin, Molydop_binding, Nitr_red_alph_N]))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

QGHV01000008.1 - Region 1 - pdu

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Location: 17,123 - 47,085 nt. (total: 29,963 nt) Show pHMM detection rules used

Region on contig edge.

pdu: (minimum(2, [Aldedh, BMC, Cob_adeno_trans, EutN_CcmL, Fe-ADH, Fe-ADH_2, PDU_like, PTAC, PduV-EutP]) and Dehydratase_MU and Dehydratase_SU and Dehydratase_LU)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters