GCA_003175115.1 - 4 region(s)

Identified primary metabolite regions

QGHY01000010.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 2.1	proline2aminovalerate	npAA	1	24,953	Proline to aminovalerate C. sticklandii	AMI	75%

QGHY01000012.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 24.1	pdu	SCFA-other	1	24,085	Propanediol degradation S. enterica	PDU	66%

QGHY01000037.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 197.1	Nitrate_reductase	E-MGC	1	15,873	Nitrate reductase E. coli	NIR	40%

QGHY01000005.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 211.1	TPP_AA_metabolism	Putative	1	26,763

No primary metabolite regions were found in these records:: QGHY01000001.1; QGHY01000100.1; QGHY01000101.1; QGHY01000102.1; QGHY01000103.1; QGHY01000104.1; QGHY01000105.1; QGHY01000106.1; QGHY01000107.1; QGHY01000108.1; QGHY01000109.1; QGHY01000011.1; QGHY01000110.1; QGHY01000111.1; QGHY01000112.1; QGHY01000113.1; QGHY01000114.1; QGHY01000115.1; QGHY01000116.1; QGHY01000117.1; QGHY01000118.1; QGHY01000119.1; QGHY01000120.1; QGHY01000121.1; QGHY01000122.1; QGHY01000123.1; QGHY01000124.1; QGHY01000125.1; QGHY01000126.1; QGHY01000127.1; QGHY01000128.1; QGHY01000129.1; QGHY01000013.1; QGHY01000130.1; QGHY01000131.1; QGHY01000132.1; QGHY01000133.1; QGHY01000134.1; QGHY01000135.1; QGHY01000136.1; QGHY01000137.1; QGHY01000138.1; QGHY01000139.1; QGHY01000014.1; QGHY01000140.1; QGHY01000141.1; QGHY01000142.1; QGHY01000143.1; QGHY01000144.1; QGHY01000145.1; QGHY01000146.1; QGHY01000147.1; QGHY01000148.1; QGHY01000149.1; QGHY01000015.1; QGHY01000150.1; QGHY01000151.1; QGHY01000152.1; QGHY01000153.1; QGHY01000154.1; QGHY01000155.1; QGHY01000156.1; QGHY01000157.1; QGHY01000158.1; QGHY01000159.1; QGHY01000016.1; QGHY01000160.1; QGHY01000161.1; QGHY01000162.1; QGHY01000163.1; QGHY01000164.1; QGHY01000165.1; QGHY01000166.1; QGHY01000167.1; QGHY01000168.1; QGHY01000169.1; QGHY01000017.1; QGHY01000170.1; QGHY01000171.1; QGHY01000172.1; QGHY01000173.1; QGHY01000174.1; QGHY01000175.1; QGHY01000176.1; QGHY01000177.1; QGHY01000178.1; QGHY01000179.1; QGHY01000018.1; QGHY01000180.1; QGHY01000181.1; QGHY01000182.1; QGHY01000183.1; QGHY01000184.1; QGHY01000185.1; QGHY01000186.1; QGHY01000187.1; QGHY01000188.1; QGHY01000189.1; QGHY01000019.1; QGHY01000190.1; QGHY01000191.1; QGHY01000192.1; QGHY01000193.1; QGHY01000194.1; QGHY01000195.1; QGHY01000196.1; QGHY01000197.1; QGHY01000198.1; QGHY01000199.1; QGHY01000002.1; QGHY01000020.1; QGHY01000200.1; QGHY01000201.1; QGHY01000202.1; QGHY01000203.1; QGHY01000204.1; QGHY01000205.1; QGHY01000206.1; QGHY01000207.1; QGHY01000208.1; QGHY01000209.1; QGHY01000021.1; QGHY01000210.1; QGHY01000211.1; QGHY01000212.1; QGHY01000213.1; QGHY01000214.1; QGHY01000215.1; QGHY01000216.1; QGHY01000217.1; QGHY01000218.1; QGHY01000219.1; QGHY01000022.1; QGHY01000220.1; QGHY01000221.1; QGHY01000222.1; QGHY01000223.1; QGHY01000224.1; QGHY01000225.1; QGHY01000226.1; QGHY01000227.1; QGHY01000228.1; QGHY01000229.1; QGHY01000023.1; QGHY01000230.1; QGHY01000231.1; QGHY01000232.1; QGHY01000233.1; QGHY01000234.1; QGHY01000235.1; QGHY01000236.1; QGHY01000237.1; QGHY01000238.1; QGHY01000239.1; QGHY01000024.1; QGHY01000240.1; QGHY01000241.1; QGHY01000242.1; QGHY01000243.1; QGHY01000244.1; QGHY01000245.1; QGHY01000246.1; QGHY01000247.1; QGHY01000248.1; QGHY01000249.1; QGHY01000025.1; QGHY01000250.1; QGHY01000251.1; QGHY01000252.1; QGHY01000253.1; QGHY01000254.1; QGHY01000255.1; QGHY01000256.1; QGHY01000257.1; QGHY01000258.1; QGHY01000259.1; QGHY01000026.1; QGHY01000260.1; QGHY01000261.1; QGHY01000262.1; QGHY01000263.1; QGHY01000264.1; QGHY01000265.1; QGHY01000027.1; QGHY01000028.1; QGHY01000029.1; QGHY01000003.1; QGHY01000030.1; QGHY01000031.1; QGHY01000032.1; QGHY01000033.1; QGHY01000034.1; QGHY01000035.1; QGHY01000036.1; QGHY01000038.1; QGHY01000039.1; QGHY01000004.1; QGHY01000040.1; QGHY01000041.1; QGHY01000042.1; QGHY01000043.1; QGHY01000044.1; QGHY01000045.1; QGHY01000046.1; QGHY01000047.1; QGHY01000048.1; QGHY01000049.1; QGHY01000050.1; QGHY01000051.1; QGHY01000052.1; QGHY01000053.1; QGHY01000054.1; QGHY01000055.1; QGHY01000056.1; QGHY01000057.1; QGHY01000058.1; QGHY01000059.1; QGHY01000006.1; QGHY01000060.1; QGHY01000061.1; QGHY01000062.1; QGHY01000063.1; QGHY01000064.1; QGHY01000065.1; QGHY01000066.1; QGHY01000067.1; QGHY01000068.1; QGHY01000069.1; QGHY01000007.1; QGHY01000070.1; QGHY01000071.1; QGHY01000072.1; QGHY01000073.1; QGHY01000074.1; QGHY01000075.1; QGHY01000076.1; QGHY01000077.1; QGHY01000078.1; QGHY01000079.1; QGHY01000008.1; QGHY01000080.1; QGHY01000081.1; QGHY01000082.1; QGHY01000083.1; QGHY01000084.1; QGHY01000085.1; QGHY01000086.1; QGHY01000087.1; QGHY01000088.1; QGHY01000089.1; QGHY01000009.1; QGHY01000090.1; QGHY01000091.1; QGHY01000092.1; QGHY01000093.1; QGHY01000094.1; QGHY01000095.1; QGHY01000096.1; QGHY01000097.1; QGHY01000098.1; QGHY01000099.1

Compact view

QGHY01000010.1 - Region 1 - proline2aminovalerate

Download region GenBank file

Location: 1 - 24,953 nt. (total: 24,953 nt) Show pHMM detection rules used

Region on contig edge.

proline2aminovalerate: (Proline_reductase and (Pro_racemase or GRDB) and not ACP_syn_III_C)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

QGHY01000012.1 - Region 1 - pdu

Download region GenBank file

Location: 1 - 24,085 nt. (total: 24,085 nt) Show pHMM detection rules used

Region on contig edge.

pdu: (minimum(2, [Aldedh, BMC, Cob_adeno_trans, EutN_CcmL, Fe-ADH, Fe-ADH_2, PDU_like, PTAC, PduV-EutP]) and Dehydratase_MU and Dehydratase_SU and Dehydratase_LU)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

QGHY01000037.1 - Region 1 - Nitrate_reductase

Download region GenBank file

Location: 1 - 15,873 nt. (total: 15,873 nt) Show pHMM detection rules used

Region on contig edge.

Nitrate_reductase: (Nitr_red_bet_C and Nitrate_red_del and Nitrate_red_gam and Molybdopterin and minimum(2, [Fer4_11, Molybdopterin, Molydop_binding, Nitr_red_alph_N]))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

QGHY01000005.1 - Region 1 - TPP_AA_metabolism

Download region GenBank file

Location: 1 - 26,763 nt. (total: 26,763 nt) Show pHMM detection rules used

Region on contig edge.

TPP_AA_metabolism: (TPP_enzyme_C and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or Gly_8-9_TMA or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and minimum(2, [ALS_ss_C, AlaDh_PNT_C, Arginase, BKACE, BcrAD_BadFG, Beta_elim_lyase, CPSase_L_D2, Cys_Met_Meta_PP, ELFV_dehydrog, GRDB, Glu_syn_central, Glu_synthase, Gly_reductase, HAAA1, HG2B1, HG2B2, HGD-D, HleuD1, HleuD2, HleuS1, HleuS2, Homoserine_dh, ILVD_EDD, IlvC, Lactoyl-CoA1, Lactoyl-CoA2, Lyase_aromatic, MAAL_C, OKR_DC_1_5_lysine, OKR_DC_1_5_ornithine, OKR_DC_1_7_arginine, OKR_DC_1_C, OTCace, PALP, Proline_reductase, Sacchrp_dh_C, TPL, Thr_dehydrat_C, TnaA, Urocanase]) and not (POR or POR_N or PFOR_II))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.