GCA_003203815.1 - 2 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

QJOG01000140.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 140.1	NRPS	1	3,880

QJOG01000196.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 196.1	arylpolyene	1	1,723

Region	Type	From	To	Most similar known cluster	Similarity
Region 140.1	NRPS	1	3,880
Region 196.1	arylpolyene	1	1,723

Compact view

QJOG01000140.1 - Region 1 - NRPS

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Location: 1 - 3,880 nt. (total: 3,880 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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NRPS/PKS domains

KnownClusterBlast

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters

No matches found.

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 3880:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (tyr)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg140_1

Search NORINE for peptide: strict or relaxed

AMP-binding (8..390): tyr

NRPSPredictor2: tyr

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: N/A
Small clusters prediction:: tyr, bht
Single AA prediction:: tyr

Stachelhaus prediction details:

Stachelhaus sequence:: DvtSmAlVYK
Nearest Stachelhaus code:: val
Stachelhaus code match:: 60% (weak)

QJOG01000196.1 - Region 1 - arylpolyene