GCA_003204025.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

QJOR01000001.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	RiPP-like	156,476	167,501

QJOR01000085.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 85.1	NRPS	1	7,044

QJOR01000178.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 178.1	arylpolyene	1	1,613

Region	Type	From	To	Similarity
Region 1.1	RiPP-like	156,476	167,501
Region 85.1	NRPS	1	7,044
Region 178.1	arylpolyene	1	1,613

No secondary metabolite regions were found in these records:: QJOR01000002.1; QJOR01000003.1; QJOR01000004.1; QJOR01000005.1; QJOR01000006.1; QJOR01000007.1; QJOR01000008.1; QJOR01000009.1; QJOR01000010.1; QJOR01000011.1; QJOR01000012.1; QJOR01000013.1; QJOR01000014.1; QJOR01000015.1; QJOR01000016.1; QJOR01000017.1; QJOR01000018.1; QJOR01000019.1; QJOR01000020.1; QJOR01000021.1; QJOR01000022.1; QJOR01000023.1; QJOR01000024.1; QJOR01000025.1; QJOR01000026.1; QJOR01000027.1; QJOR01000028.1; QJOR01000029.1; QJOR01000030.1; QJOR01000031.1; QJOR01000032.1; QJOR01000033.1; QJOR01000034.1; QJOR01000035.1; QJOR01000036.1; QJOR01000037.1; QJOR01000038.1; QJOR01000039.1; QJOR01000040.1; QJOR01000041.1; QJOR01000042.1; QJOR01000043.1; QJOR01000044.1; QJOR01000045.1; QJOR01000046.1; QJOR01000047.1; QJOR01000048.1; QJOR01000049.1; QJOR01000050.1; QJOR01000051.1; QJOR01000052.1; QJOR01000053.1; QJOR01000054.1; QJOR01000055.1; QJOR01000056.1; QJOR01000057.1; QJOR01000058.1; QJOR01000059.1; QJOR01000060.1; QJOR01000061.1; QJOR01000062.1; QJOR01000063.1; QJOR01000064.1; QJOR01000065.1; QJOR01000066.1; QJOR01000067.1; QJOR01000068.1; QJOR01000069.1; QJOR01000070.1; QJOR01000071.1; QJOR01000072.1; QJOR01000073.1; QJOR01000074.1; QJOR01000075.1; QJOR01000076.1; QJOR01000077.1; QJOR01000078.1; QJOR01000079.1; QJOR01000080.1; QJOR01000081.1; QJOR01000082.1; QJOR01000083.1; QJOR01000084.1; QJOR01000086.1; QJOR01000087.1; QJOR01000088.1; QJOR01000089.1; QJOR01000090.1; QJOR01000091.1; QJOR01000092.1; QJOR01000093.1; QJOR01000094.1; QJOR01000095.1; QJOR01000096.1; QJOR01000097.1; QJOR01000098.1; QJOR01000099.1; QJOR01000100.1; QJOR01000101.1; QJOR01000102.1; QJOR01000103.1; QJOR01000104.1; QJOR01000105.1; QJOR01000106.1; QJOR01000107.1; QJOR01000108.1; QJOR01000109.1; QJOR01000110.1; QJOR01000111.1; QJOR01000112.1; QJOR01000113.1; QJOR01000114.1; QJOR01000115.1; QJOR01000116.1; QJOR01000117.1; QJOR01000118.1; QJOR01000119.1; QJOR01000120.1; QJOR01000121.1; QJOR01000122.1; QJOR01000123.1; QJOR01000124.1; QJOR01000125.1; QJOR01000126.1; QJOR01000127.1; QJOR01000128.1; QJOR01000129.1; QJOR01000130.1; QJOR01000131.1; QJOR01000132.1; QJOR01000133.1; QJOR01000134.1; QJOR01000135.1; QJOR01000136.1; QJOR01000137.1; QJOR01000138.1; QJOR01000139.1; QJOR01000140.1; QJOR01000141.1; QJOR01000142.1; QJOR01000143.1; QJOR01000144.1; QJOR01000145.1; QJOR01000146.1; QJOR01000147.1; QJOR01000148.1; QJOR01000149.1; QJOR01000150.1; QJOR01000151.1; QJOR01000152.1; QJOR01000153.1; QJOR01000154.1; QJOR01000155.1; QJOR01000156.1; QJOR01000157.1; QJOR01000158.1; QJOR01000159.1; QJOR01000160.1; QJOR01000161.1; QJOR01000162.1; QJOR01000163.1; QJOR01000164.1; QJOR01000165.1; QJOR01000166.1; QJOR01000167.1; QJOR01000168.1; QJOR01000169.1; QJOR01000170.1; QJOR01000171.1; QJOR01000172.1; QJOR01000173.1; QJOR01000174.1; QJOR01000175.1; QJOR01000176.1; QJOR01000177.1; QJOR01000179.1; QJOR01000180.1; QJOR01000181.1; QJOR01000182.1; QJOR01000183.1; QJOR01000184.1; QJOR01000185.1; QJOR01000186.1; QJOR01000187.1; QJOR01000188.1; QJOR01000189.1; QJOR01000190.1; QJOR01000191.1; QJOR01000192.1; QJOR01000193.1; QJOR01000194.1; QJOR01000195.1

Compact view

QJOR01000001.1 - Region 1 - RiPP-like

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Location: 156,476 - 167,501 nt. (total: 11,026 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.

QJOR01000085.1 - Region 1 - NRPS

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Location: 1 - 7,044 nt. (total: 7,044 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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zoom to selection

Gene details

Select a gene to view the details available for it

NRPS/PKS domains

KnownClusterBlast

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters

No matches found.

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 7044:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (tyr)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg85_6

Search NORINE for peptide: strict or relaxed

AMP-binding (8..390): tyr

NRPSPredictor2: tyr

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: N/A
Small clusters prediction:: tyr, bht
Single AA prediction:: tyr

Stachelhaus prediction details:

Stachelhaus sequence:: DvtSmAlVYK
Nearest Stachelhaus code:: val
Stachelhaus code match:: 60% (weak)

QJOR01000178.1 - Region 1 - arylpolyene

Download region GenBank file

Download region SVG

Location: 1 - 1,613 nt. (total: 1,613 nt) Show pHMM detection rules used

Region on contig edge.

arylpolyene: (APE_KS1 or APE_KS2)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.