GCA_003204055.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

QJOS01000001.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	RiPP-like	90,490	101,515

QJOS01000088.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 88.1	NRPS	1	7,044

QJOS01000144.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 144.1	arylpolyene	1	2,634

Region	Type	From	To	Similarity
Region 1.1	RiPP-like	90,490	101,515
Region 88.1	NRPS	1	7,044
Region 144.1	arylpolyene	1	2,634

No secondary metabolite regions were found in these records:: QJOS01000002.1; QJOS01000003.1; QJOS01000004.1; QJOS01000005.1; QJOS01000006.1; QJOS01000007.1; QJOS01000008.1; QJOS01000009.1; QJOS01000010.1; QJOS01000011.1; QJOS01000012.1; QJOS01000013.1; QJOS01000014.1; QJOS01000015.1; QJOS01000016.1; QJOS01000017.1; QJOS01000018.1; QJOS01000019.1; QJOS01000020.1; QJOS01000021.1; QJOS01000022.1; QJOS01000023.1; QJOS01000024.1; QJOS01000025.1; QJOS01000026.1; QJOS01000027.1; QJOS01000028.1; QJOS01000029.1; QJOS01000030.1; QJOS01000031.1; QJOS01000032.1; QJOS01000033.1; QJOS01000034.1; QJOS01000035.1; QJOS01000036.1; QJOS01000037.1; QJOS01000038.1; QJOS01000039.1; QJOS01000040.1; QJOS01000041.1; QJOS01000042.1; QJOS01000043.1; QJOS01000044.1; QJOS01000045.1; QJOS01000046.1; QJOS01000047.1; QJOS01000048.1; QJOS01000049.1; QJOS01000050.1; QJOS01000051.1; QJOS01000052.1; QJOS01000053.1; QJOS01000054.1; QJOS01000055.1; QJOS01000056.1; QJOS01000057.1; QJOS01000058.1; QJOS01000059.1; QJOS01000060.1; QJOS01000061.1; QJOS01000062.1; QJOS01000063.1; QJOS01000064.1; QJOS01000065.1; QJOS01000066.1; QJOS01000067.1; QJOS01000068.1; QJOS01000069.1; QJOS01000070.1; QJOS01000071.1; QJOS01000072.1; QJOS01000073.1; QJOS01000074.1; QJOS01000075.1; QJOS01000076.1; QJOS01000077.1; QJOS01000078.1; QJOS01000079.1; QJOS01000080.1; QJOS01000081.1; QJOS01000082.1; QJOS01000083.1; QJOS01000084.1; QJOS01000085.1; QJOS01000086.1; QJOS01000087.1; QJOS01000089.1; QJOS01000090.1; QJOS01000091.1; QJOS01000092.1; QJOS01000093.1; QJOS01000094.1; QJOS01000095.1; QJOS01000096.1; QJOS01000097.1; QJOS01000098.1; QJOS01000099.1; QJOS01000100.1; QJOS01000101.1; QJOS01000102.1; QJOS01000103.1; QJOS01000104.1; QJOS01000105.1; QJOS01000106.1; QJOS01000107.1; QJOS01000108.1; QJOS01000109.1; QJOS01000110.1; QJOS01000111.1; QJOS01000112.1; QJOS01000113.1; QJOS01000114.1; QJOS01000115.1; QJOS01000116.1; QJOS01000117.1; QJOS01000118.1; QJOS01000119.1; QJOS01000120.1; QJOS01000121.1; QJOS01000122.1; QJOS01000123.1; QJOS01000124.1; QJOS01000125.1; QJOS01000126.1; QJOS01000127.1; QJOS01000128.1; QJOS01000129.1; QJOS01000130.1; QJOS01000131.1; QJOS01000132.1; QJOS01000133.1; QJOS01000134.1; QJOS01000135.1; QJOS01000136.1; QJOS01000137.1; QJOS01000138.1; QJOS01000139.1; QJOS01000140.1; QJOS01000141.1; QJOS01000142.1; QJOS01000143.1; QJOS01000145.1; QJOS01000146.1; QJOS01000147.1; QJOS01000148.1; QJOS01000149.1; QJOS01000150.1; QJOS01000151.1; QJOS01000152.1; QJOS01000153.1; QJOS01000154.1; QJOS01000155.1; QJOS01000156.1; QJOS01000157.1; QJOS01000158.1; QJOS01000159.1; QJOS01000160.1; QJOS01000161.1; QJOS01000162.1; QJOS01000163.1; QJOS01000164.1; QJOS01000165.1; QJOS01000166.1; QJOS01000167.1; QJOS01000168.1; QJOS01000169.1; QJOS01000170.1; QJOS01000171.1; QJOS01000172.1; QJOS01000173.1; QJOS01000174.1; QJOS01000175.1; QJOS01000176.1; QJOS01000177.1; QJOS01000178.1; QJOS01000179.1; QJOS01000180.1; QJOS01000181.1; QJOS01000182.1; QJOS01000183.1; QJOS01000184.1; QJOS01000185.1; QJOS01000186.1; QJOS01000187.1; QJOS01000188.1

Compact view

QJOS01000001.1 - Region 1 - RiPP-like

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Location: 90,490 - 101,515 nt. (total: 11,026 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.

QJOS01000088.1 - Region 1 - NRPS

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Location: 1 - 7,044 nt. (total: 7,044 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

NRPS/PKS domains

KnownClusterBlast

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters

No matches found.

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 7044:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (tyr)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg88_6

Search NORINE for peptide: strict or relaxed

AMP-binding (8..390): tyr

NRPSPredictor2: tyr

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: N/A
Small clusters prediction:: tyr, bht
Single AA prediction:: tyr

Stachelhaus prediction details:

Stachelhaus sequence:: DvtSmAlVYK
Nearest Stachelhaus code:: val
Stachelhaus code match:: 60% (weak)

QJOS01000144.1 - Region 1 - arylpolyene

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Location: 1 - 2,634 nt. (total: 2,634 nt) Show pHMM detection rules used

Region on contig edge.

arylpolyene: (APE_KS1 or APE_KS2)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.