GCA_003336815.1 - 8 region(s)

Identified primary metabolite regions

QEQU01000001.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 1.1	fatty_acids-unassigned	Putative	48,185	101,044

QEQU01000019.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 101.1	Putrescine2spermidine	Aliphatic_amine	71,731	92,598	Arginine degradation C. sticklandii	ARG	22%
Region 101.2	Nitrate_reductase	E-MGC	93,286	114,882	Nitrate reductase E. coli	NIR	60%

QEQU01000002.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 112.1	TPP_AA_metabolism	Putative	1	21,192

QEQU01000021.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 119.1	Fumarate2succinate	SCFA	108,830	125,256	Acetate to butyrate C. sporogenes	BUT	33%

QEQU01000041.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 148.1	hydroxybenzoate2phenol	Aromatic	1	19,633	hydroxybenzoate2phenol K. pneumoniae	PHE	100%

QEQU01000009.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 201.1	fatty_acids-unassigned	Putative	25,071	48,307	Acetate to butyrate C. sporogenes	BUT	50%

QEQU01000098.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 210.1	histidine2glutamate_hutHGIU_operon	Other	1	12,526	Histidine to glutamate K. pneumoniae	GLU	60%

Region	Type	Class	From	To	Most similar known cluster	Similarity
Region 1.1	fatty_acids-unassigned	Putative	48,185	101,044
Region 101.1	Putrescine2spermidine	Aliphatic_amine	71,731	92,598	Arginine degradation C. sticklandii	ARG	22%
Region 101.2	Nitrate_reductase	E-MGC	93,286	114,882	Nitrate reductase E. coli	NIR	60%
Region 112.1	TPP_AA_metabolism	Putative	1	21,192
Region 119.1	Fumarate2succinate	SCFA	108,830	125,256	Acetate to butyrate C. sporogenes	BUT	33%
Region 148.1	hydroxybenzoate2phenol	Aromatic	1	19,633	hydroxybenzoate2phenol K. pneumoniae	PHE	100%
Region 201.1	fatty_acids-unassigned	Putative	25,071	48,307	Acetate to butyrate C. sporogenes	BUT	50%
Region 210.1	histidine2glutamate_hutHGIU_operon	Other	1	12,526	Histidine to glutamate K. pneumoniae	GLU	60%

No primary metabolite regions were found in these records:: QEQU01000010.1; QEQU01000100.1; QEQU01000101.1; QEQU01000102.1; QEQU01000103.1; QEQU01000104.1; QEQU01000105.1; QEQU01000106.1; QEQU01000107.1; QEQU01000108.1; QEQU01000109.1; QEQU01000011.1; QEQU01000110.1; QEQU01000111.1; QEQU01000112.1; QEQU01000113.1; QEQU01000114.1; QEQU01000115.1; QEQU01000116.1; QEQU01000117.1; QEQU01000118.1; QEQU01000119.1; QEQU01000012.1; QEQU01000120.1; QEQU01000121.1; QEQU01000122.1; QEQU01000123.1; QEQU01000124.1; QEQU01000125.1; QEQU01000126.1; QEQU01000127.1; QEQU01000128.1; QEQU01000129.1; QEQU01000013.1; QEQU01000130.1; QEQU01000131.1; QEQU01000132.1; QEQU01000133.1; QEQU01000134.1; QEQU01000135.1; QEQU01000136.1; QEQU01000137.1; QEQU01000138.1; QEQU01000139.1; QEQU01000014.1; QEQU01000140.1; QEQU01000141.1; QEQU01000142.1; QEQU01000143.1; QEQU01000144.1; QEQU01000145.1; QEQU01000146.1; QEQU01000147.1; QEQU01000148.1; QEQU01000149.1; QEQU01000015.1; QEQU01000150.1; QEQU01000151.1; QEQU01000152.1; QEQU01000153.1; QEQU01000154.1; QEQU01000155.1; QEQU01000156.1; QEQU01000157.1; QEQU01000158.1; QEQU01000159.1; QEQU01000016.1; QEQU01000160.1; QEQU01000161.1; QEQU01000162.1; QEQU01000163.1; QEQU01000164.1; QEQU01000165.1; QEQU01000166.1; QEQU01000167.1; QEQU01000168.1; QEQU01000169.1; QEQU01000017.1; QEQU01000170.1; QEQU01000171.1; QEQU01000172.1; QEQU01000173.1; QEQU01000174.1; QEQU01000175.1; QEQU01000176.1; QEQU01000177.1; QEQU01000178.1; QEQU01000179.1; QEQU01000018.1; QEQU01000180.1; QEQU01000181.1; QEQU01000182.1; QEQU01000183.1; QEQU01000184.1; QEQU01000185.1; QEQU01000186.1; QEQU01000187.1; QEQU01000188.1; QEQU01000189.1; QEQU01000190.1; QEQU01000191.1; QEQU01000192.1; QEQU01000193.1; QEQU01000194.1; QEQU01000195.1; QEQU01000196.1; QEQU01000197.1; QEQU01000198.1; QEQU01000199.1; QEQU01000020.1; QEQU01000200.1; QEQU01000201.1; QEQU01000202.1; QEQU01000203.1; QEQU01000209.1; QEQU01000210.1; QEQU01000214.1; QEQU01000216.1; QEQU01000022.1; QEQU01000221.1; QEQU01000227.1; QEQU01000229.1; QEQU01000023.1; QEQU01000024.1; QEQU01000243.1; QEQU01000025.1; QEQU01000026.1; QEQU01000027.1; QEQU01000028.1; QEQU01000029.1; QEQU01000003.1; QEQU01000030.1; QEQU01000031.1; QEQU01000032.1; QEQU01000033.1; QEQU01000034.1; QEQU01000035.1; QEQU01000036.1; QEQU01000037.1; QEQU01000038.1; QEQU01000039.1; QEQU01000004.1; QEQU01000040.1; QEQU01000042.1; QEQU01000043.1; QEQU01000044.1; QEQU01000045.1; QEQU01000046.1; QEQU01000047.1; QEQU01000048.1; QEQU01000049.1; QEQU01000005.1; QEQU01000050.1; QEQU01000051.1; QEQU01000052.1; QEQU01000053.1; QEQU01000054.1; QEQU01000055.1; QEQU01000056.1; QEQU01000057.1; QEQU01000058.1; QEQU01000059.1; QEQU01000006.1; QEQU01000060.1; QEQU01000061.1; QEQU01000062.1; QEQU01000063.1; QEQU01000064.1; QEQU01000065.1; QEQU01000066.1; QEQU01000067.1; QEQU01000068.1; QEQU01000069.1; QEQU01000007.1; QEQU01000070.1; QEQU01000071.1; QEQU01000072.1; QEQU01000073.1; QEQU01000074.1; QEQU01000075.1; QEQU01000076.1; QEQU01000077.1; QEQU01000078.1; QEQU01000079.1; QEQU01000008.1; QEQU01000080.1; QEQU01000081.1; QEQU01000082.1; QEQU01000083.1; QEQU01000084.1; QEQU01000085.1; QEQU01000086.1; QEQU01000087.1; QEQU01000088.1; QEQU01000089.1; QEQU01000090.1; QEQU01000091.1; QEQU01000092.1; QEQU01000093.1; QEQU01000094.1; QEQU01000095.1; QEQU01000096.1; QEQU01000097.1; QEQU01000099.1

Compact view

QEQU01000001.1 - Region 1 - fatty_acids-unassigned

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Location: 48,185 - 101,044 nt. (total: 52,860 nt) Show pHMM detection rules used

fatty_acids-unassigned: (not (EC1_2-faecali or baiH or baiCD or ECH1_Enoyl_CoA_DH1 or ECH1_Enoyl_CoA_DH2 or ECH1_Enoyl_CoA_DH3 or ECH1_Enoyl_CoA_DH4 or POR or POR_N or PFOR_II) and minimum(4, [AcetylCoA_hyd_C, Acyl-CoA_dh_1, Acyl-CoA_dh_2, EC1_2-faecali, ECH1_8_CARC, ECH_1, ECH_2, HBT, HCDH, HCDH_N, Thiolase_C, Thiolase_N, ketoacyl-synt]))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

QEQU01000019.1 - Region 1 - Putrescine2spermidine

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Location: 71,731 - 92,598 nt. (total: 20,868 nt) Show pHMM detection rules used

Putrescine2spermidine: (minimum(2, [AdoMet_dc, Spermine_synt_N, Spermine_synth]) or (Orn_DAP_Arg_deC and Sacchrp_dh_C))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

QEQU01000019.1 - Region 2 - Nitrate_reductase

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Location: 93,286 - 114,882 nt. (total: 21,597 nt) Show pHMM detection rules used

Region on contig edge.

Nitrate_reductase: (Nitr_red_bet_C and Nitrate_red_del and Nitrate_red_gam and Molybdopterin and minimum(2, [Fer4_11, Molybdopterin, Molydop_binding, Nitr_red_alph_N]))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

QEQU01000002.1 - Region 1 - TPP_AA_metabolism

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Location: 1 - 21,192 nt. (total: 21,192 nt) Show pHMM detection rules used

Region on contig edge.

TPP_AA_metabolism: (TPP_enzyme_C and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or Gly_8-9_TMA or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and minimum(2, [ALS_ss_C, AlaDh_PNT_C, Arginase, BKACE, BcrAD_BadFG, Beta_elim_lyase, CPSase_L_D2, Cys_Met_Meta_PP, ELFV_dehydrog, GRDB, Glu_syn_central, Glu_synthase, Gly_reductase, HAAA1, HG2B1, HG2B2, HGD-D, HleuD1, HleuD2, HleuS1, HleuS2, Homoserine_dh, ILVD_EDD, IlvC, Lactoyl-CoA1, Lactoyl-CoA2, Lyase_aromatic, MAAL_C, OKR_DC_1_5_lysine, OKR_DC_1_5_ornithine, OKR_DC_1_7_arginine, OKR_DC_1_C, OTCace, PALP, Proline_reductase, Sacchrp_dh_C, TPL, Thr_dehydrat_C, TnaA, Urocanase]) and not (POR or POR_N or PFOR_II))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

QEQU01000021.1 - Region 1 - Fumarate2succinate

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Location: 108,830 - 125,256 nt. (total: 16,427 nt) Show pHMM detection rules used

Region on contig edge.

Fumarate2succinate: (Succ_DH_flav_C and FAD_binding_2 and (Fer2_3 or Fer4_7 or SucD_FumR))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

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Gene details

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KnownClusterBlast

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QEQU01000041.1 - Region 1 - hydroxybenzoate2phenol

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Location: 1 - 19,633 nt. (total: 19,633 nt) Show pHMM detection rules used

Region on contig edge.

hydroxybenzoate2phenol: (Flavoprotein and Phea_decarb and not ubi_syn)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

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electron transport genes

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Gene details

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KnownClusterBlast

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QEQU01000009.1 - Region 1 - fatty_acids-unassigned

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Location: 25,071 - 48,307 nt. (total: 23,237 nt) Show pHMM detection rules used

fatty_acids-unassigned: (not (EC1_2-faecali or baiH or baiCD or ECH1_Enoyl_CoA_DH1 or ECH1_Enoyl_CoA_DH2 or ECH1_Enoyl_CoA_DH3 or ECH1_Enoyl_CoA_DH4 or POR or POR_N or PFOR_II) and minimum(4, [AcetylCoA_hyd_C, Acyl-CoA_dh_1, Acyl-CoA_dh_2, EC1_2-faecali, ECH1_8_CARC, ECH_1, ECH_2, HBT, HCDH, HCDH_N, Thiolase_C, Thiolase_N, ketoacyl-synt]))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

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QEQU01000098.1 - Region 1 - histidine2glutamate_hutHGIU_operon

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Location: 1 - 12,526 nt. (total: 12,526 nt) Show pHMM detection rules used

Region on contig edge.

histidine2glutamate_hutHGIU_operon: (minimum(3, [Amidohydro_1, Amidohydro_3, Arginase, FGase, Urocanase]) and Lyase_aromatic and Urocanase_C)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters