GCA_003346025.1 - 2 region(s)

Identified primary metabolite regions

QMJV01000016.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 58.1	Pyruvate2acetate-formate	SCFA	12,492	35,736	Pyruvate to acetate-formate E. coli	PFL_acetate	100%

QMJV01000018.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 60.1	TPP_fatty_acids	Putative	1	16,137

No primary metabolite regions were found in these records:: QMJV01000100.1; QMJV01000101.1; QMJV01000102.1; QMJV01000103.1; QMJV01000104.1; QMJV01000105.1; QMJV01000106.1; QMJV01000107.1; QMJV01000108.1; QMJV01000109.1; QMJV01000010.1; QMJV01000110.1; QMJV01000111.1; QMJV01000112.1; QMJV01000113.1; QMJV01000114.1; QMJV01000115.1; QMJV01000116.1; QMJV01000117.1; QMJV01000118.1; QMJV01000119.1; QMJV01000011.1; QMJV01000120.1; QMJV01000121.1; QMJV01000122.1; QMJV01000123.1; QMJV01000124.1; QMJV01000125.1; QMJV01000126.1; QMJV01000127.1; QMJV01000128.1; QMJV01000129.1; QMJV01000012.1; QMJV01000130.1; QMJV01000131.1; QMJV01000132.1; QMJV01000133.1; QMJV01000134.1; QMJV01000135.1; QMJV01000136.1; QMJV01000137.1; QMJV01000138.1; QMJV01000139.1; QMJV01000013.1; QMJV01000140.1; QMJV01000141.1; QMJV01000142.1; QMJV01000143.1; QMJV01000144.1; QMJV01000145.1; QMJV01000146.1; QMJV01000147.1; QMJV01000148.1; QMJV01000149.1; QMJV01000014.1; QMJV01000150.1; QMJV01000015.1; QMJV01000017.1; QMJV01000019.1; QMJV01000001.1; QMJV01000020.1; QMJV01000021.1; QMJV01000022.1; QMJV01000023.1; QMJV01000024.1; QMJV01000025.1; QMJV01000026.1; QMJV01000027.1; QMJV01000028.1; QMJV01000029.1; QMJV01000002.1; QMJV01000030.1; QMJV01000031.1; QMJV01000032.1; QMJV01000033.1; QMJV01000034.1; QMJV01000035.1; QMJV01000036.1; QMJV01000037.1; QMJV01000038.1; QMJV01000039.1; QMJV01000003.1; QMJV01000040.1; QMJV01000041.1; QMJV01000042.1; QMJV01000043.1; QMJV01000044.1; QMJV01000045.1; QMJV01000046.1; QMJV01000047.1; QMJV01000048.1; QMJV01000049.1; QMJV01000004.1; QMJV01000050.1; QMJV01000051.1; QMJV01000052.1; QMJV01000053.1; QMJV01000054.1; QMJV01000055.1; QMJV01000056.1; QMJV01000057.1; QMJV01000058.1; QMJV01000059.1; QMJV01000005.1; QMJV01000060.1; QMJV01000061.1; QMJV01000062.1; QMJV01000063.1; QMJV01000064.1; QMJV01000065.1; QMJV01000066.1; QMJV01000067.1; QMJV01000068.1; QMJV01000069.1; QMJV01000006.1; QMJV01000070.1; QMJV01000071.1; QMJV01000072.1; QMJV01000073.1; QMJV01000074.1; QMJV01000075.1; QMJV01000076.1; QMJV01000077.1; QMJV01000078.1; QMJV01000079.1; QMJV01000007.1; QMJV01000080.1; QMJV01000081.1; QMJV01000082.1; QMJV01000083.1; QMJV01000084.1; QMJV01000085.1; QMJV01000086.1; QMJV01000087.1; QMJV01000088.1; QMJV01000089.1; QMJV01000008.1; QMJV01000090.1; QMJV01000091.1; QMJV01000092.1; QMJV01000093.1; QMJV01000094.1; QMJV01000095.1; QMJV01000096.1; QMJV01000097.1; QMJV01000098.1; QMJV01000099.1; QMJV01000009.1

Compact view

QMJV01000016.1 - Region 1 - Pyruvate2acetate-formate

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Location: 12,492 - 35,736 nt. (total: 23,245 nt) Show pHMM detection rules used

Pyruvate2acetate-formate: ((PFL_acetate1 or PFL_acetate2) and Radical_SAM)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

QMJV01000018.1 - Region 1 - TPP_fatty_acids

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Location: 1 - 16,137 nt. (total: 16,137 nt) Show pHMM detection rules used

Region on contig edge.

TPP_fatty_acids: (TPP_enzyme_C and (minimum(2, [ACD1_car, ACP_syn_III_C, AcetylCoA_hyd_C, AcetylCoA_hydro, Acyl-CoA_dh_1, Acyl-CoA_dh_2, Butyrate_kinase, CT_Propionyl_CoA1, CT_Propionyl_CoA2, CT_Propionyl_CoA3, Carboxyl_trans, CoA_trans, CoA_trans_230_acto, CoA_trans_2_CAF, CoA_trans_6_Glutaconate, E1_dh, ECH_1, ECH_2, HBT, HBT_2, HCDH, HpaB, Ketoacyl-synt_C, Thiolase_C, Thiolase_N, adh_short, adh_short_C2]) or FA_synthesis) and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and not (POR or POR_N))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.