GCA_003346075.1 - 2 region(s)

Identified primary metabolite regions

QMJU01000054.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 79.1	Pyruvate2acetate-formate	SCFA	1	12,690	Pyruvate to acetate-formate E. coli	PFL_acetate	100%

QMJU01000072.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 99.1	TPP_fatty_acids	Putative	1	7,867

No primary metabolite regions were found in these records:: QMJU01000100.1; QMJU01000101.1; QMJU01000102.1; QMJU01000103.1; QMJU01000104.1; QMJU01000105.1; QMJU01000106.1; QMJU01000107.1; QMJU01000108.1; QMJU01000109.1; QMJU01000010.1; QMJU01000110.1; QMJU01000111.1; QMJU01000112.1; QMJU01000113.1; QMJU01000114.1; QMJU01000115.1; QMJU01000116.1; QMJU01000117.1; QMJU01000118.1; QMJU01000119.1; QMJU01000011.1; QMJU01000120.1; QMJU01000121.1; QMJU01000122.1; QMJU01000123.1; QMJU01000124.1; QMJU01000125.1; QMJU01000126.1; QMJU01000127.1; QMJU01000128.1; QMJU01000129.1; QMJU01000012.1; QMJU01000013.1; QMJU01000014.1; QMJU01000015.1; QMJU01000016.1; QMJU01000017.1; QMJU01000018.1; QMJU01000019.1; QMJU01000001.1; QMJU01000020.1; QMJU01000021.1; QMJU01000022.1; QMJU01000023.1; QMJU01000024.1; QMJU01000025.1; QMJU01000026.1; QMJU01000027.1; QMJU01000028.1; QMJU01000029.1; QMJU01000002.1; QMJU01000030.1; QMJU01000031.1; QMJU01000032.1; QMJU01000033.1; QMJU01000034.1; QMJU01000035.1; QMJU01000036.1; QMJU01000037.1; QMJU01000038.1; QMJU01000039.1; QMJU01000003.1; QMJU01000040.1; QMJU01000041.1; QMJU01000042.1; QMJU01000043.1; QMJU01000044.1; QMJU01000045.1; QMJU01000046.1; QMJU01000047.1; QMJU01000048.1; QMJU01000049.1; QMJU01000004.1; QMJU01000050.1; QMJU01000051.1; QMJU01000052.1; QMJU01000053.1; QMJU01000055.1; QMJU01000056.1; QMJU01000057.1; QMJU01000058.1; QMJU01000059.1; QMJU01000005.1; QMJU01000060.1; QMJU01000061.1; QMJU01000062.1; QMJU01000063.1; QMJU01000064.1; QMJU01000065.1; QMJU01000066.1; QMJU01000067.1; QMJU01000068.1; QMJU01000069.1; QMJU01000006.1; QMJU01000070.1; QMJU01000071.1; QMJU01000073.1; QMJU01000074.1; QMJU01000075.1; QMJU01000076.1; QMJU01000077.1; QMJU01000078.1; QMJU01000079.1; QMJU01000007.1; QMJU01000080.1; QMJU01000081.1; QMJU01000082.1; QMJU01000083.1; QMJU01000084.1; QMJU01000085.1; QMJU01000086.1; QMJU01000087.1; QMJU01000088.1; QMJU01000089.1; QMJU01000008.1; QMJU01000090.1; QMJU01000091.1; QMJU01000092.1; QMJU01000093.1; QMJU01000094.1; QMJU01000095.1; QMJU01000096.1; QMJU01000097.1; QMJU01000098.1; QMJU01000099.1; QMJU01000009.1

Compact view

QMJU01000054.1 - Region 1 - Pyruvate2acetate-formate

Download region GenBank file

Location: 1 - 12,690 nt. (total: 12,690 nt) Show pHMM detection rules used

Region on contig edge.

Pyruvate2acetate-formate: ((PFL_acetate1 or PFL_acetate2) and Radical_SAM)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

QMJU01000072.1 - Region 1 - TPP_fatty_acids

Download region GenBank file

Location: 1 - 7,867 nt. (total: 7,867 nt) Show pHMM detection rules used

Region on contig edge.

TPP_fatty_acids: (TPP_enzyme_C and (minimum(2, [ACD1_car, ACP_syn_III_C, AcetylCoA_hyd_C, AcetylCoA_hydro, Acyl-CoA_dh_1, Acyl-CoA_dh_2, Butyrate_kinase, CT_Propionyl_CoA1, CT_Propionyl_CoA2, CT_Propionyl_CoA3, Carboxyl_trans, CoA_trans, CoA_trans_230_acto, CoA_trans_2_CAF, CoA_trans_6_Glutaconate, E1_dh, ECH_1, ECH_2, HBT, HBT_2, HCDH, HpaB, Ketoacyl-synt_C, Thiolase_C, Thiolase_N, adh_short, adh_short_C2]) or FA_synthesis) and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and not (POR or POR_N))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.