GCA_003436105.1 - 2 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

QSOQ01000010.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 2.1	NRPS-like	21,973	64,984

QSOQ01000004.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 18.1	lanthipeptide-class-iv	110,403	133,060

Region	Type	From	To	Most similar known cluster	Similarity
Region 2.1	NRPS-like	21,973	64,984
Region 18.1	lanthipeptide-class-iv	110,403	133,060

No secondary metabolite regions were found in these records:: QSOQ01000001.1; QSOQ01000011.1; QSOQ01000012.1; QSOQ01000013.1; QSOQ01000014.1; QSOQ01000015.1; QSOQ01000016.1; QSOQ01000017.1; QSOQ01000018.1; QSOQ01000019.1; QSOQ01000002.1; QSOQ01000020.1; QSOQ01000021.1; QSOQ01000022.1; QSOQ01000023.1; QSOQ01000003.1; QSOQ01000005.1; QSOQ01000006.1; QSOQ01000007.1; QSOQ01000008.1; QSOQ01000009.1

Compact view

QSOQ01000010.1 - Region 1 - NRPS-like

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Location: 21,973 - 64,984 nt. (total: 43,012 nt) Show pHMM detection rules used

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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NRPS/PKS domains

KnownClusterBlast

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters

No matches found.

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 21972 - 64984:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg2_28

Search NORINE for peptide: strict or relaxed

AMP-binding (14..381): X

NRPSPredictor2: gly, ala

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: gly, ala
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DfftIGiIYK
Nearest Stachelhaus code:: leu
Stachelhaus code match:: 60% (weak)

QSOQ01000004.1 - Region 1 - lanthipeptide-class-iv