GCA_003436955.1 - 2 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

QSRI01000001.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	NRPS-like	16,216	59,227
Region 1.2	lanthipeptide-class-iv	335,209	357,866

Region	Type	From	To	Most similar known cluster	Similarity
Region 1.1	NRPS-like	16,216	59,227
Region 1.2	lanthipeptide-class-iv	335,209	357,866

No secondary metabolite regions were found in these records:: QSRI01000010.1; QSRI01000011.1; QSRI01000012.1; QSRI01000013.1; QSRI01000014.1; QSRI01000002.1; QSRI01000003.1; QSRI01000004.1; QSRI01000005.1; QSRI01000006.1; QSRI01000007.1; QSRI01000008.1; QSRI01000009.1

Compact view

QSRI01000001.1 - Region 1 - NRPS-like

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Location: 16,216 - 59,227 nt. (total: 43,012 nt) Show pHMM detection rules used

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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NRPS/PKS domains

KnownClusterBlast

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters

No matches found.

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 16215 - 59227:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg1_29

Search NORINE for peptide: strict or relaxed

AMP-binding (14..381): X

NRPSPredictor2: gly, ala

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: gly, ala
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DfftIGiIYK
Nearest Stachelhaus code:: leu
Stachelhaus code match:: 60% (weak)

QSRI01000001.1 - Region 2 - lanthipeptide-class-iv