GCA_003459865.1 - 2 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

QRXC01000010.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 2.1	NRPS-like	23,165	65,111

QRXC01000003.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 23.1	lanthipeptide-class-iv	235,349	257,205

Region	Type	From	To	Most similar known cluster	Similarity
Region 2.1	NRPS-like	23,165	65,111
Region 23.1	lanthipeptide-class-iv	235,349	257,205

No secondary metabolite regions were found in these records:: QRXC01000001.1; QRXC01000011.1; QRXC01000012.1; QRXC01000013.1; QRXC01000014.1; QRXC01000015.1; QRXC01000016.1; QRXC01000017.1; QRXC01000018.1; QRXC01000019.1; QRXC01000002.1; QRXC01000020.1; QRXC01000021.1; QRXC01000022.1; QRXC01000023.1; QRXC01000024.1; QRXC01000025.1; QRXC01000026.1; QRXC01000027.1; QRXC01000028.1; QRXC01000029.1; QRXC01000030.1; QRXC01000004.1; QRXC01000005.1; QRXC01000006.1; QRXC01000007.1; QRXC01000008.1; QRXC01000009.1

Compact view

QRXC01000010.1 - Region 1 - NRPS-like

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Location: 23,165 - 65,111 nt. (total: 41,947 nt) Show pHMM detection rules used

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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NRPS/PKS domains

KnownClusterBlast

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters

No matches found.

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 23164 - 65111:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg2_44

Search NORINE for peptide: strict or relaxed

AMP-binding (14..381): X

NRPSPredictor2: gly, ala

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: gly, ala
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DfftIGiIYK
Nearest Stachelhaus code:: leu
Stachelhaus code match:: 60% (weak)

QRXC01000003.1 - Region 1 - lanthipeptide-class-iv