GCA_003464925.1 - 2 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

QSAC01000001.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	NRPS-like	228,022	270,067

QSAC01000009.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 14.1	lanthipeptide-class-iv	42,949	65,606

Region	Type	From	To	Most similar known cluster	Similarity
Region 1.1	NRPS-like	228,022	270,067
Region 14.1	lanthipeptide-class-iv	42,949	65,606

No secondary metabolite regions were found in these records:: QSAC01000010.1; QSAC01000011.1; QSAC01000012.1; QSAC01000013.1; QSAC01000014.1; QSAC01000002.1; QSAC01000003.1; QSAC01000004.1; QSAC01000005.1; QSAC01000006.1; QSAC01000007.1; QSAC01000008.1

Compact view

QSAC01000001.1 - Region 1 - NRPS-like

Download region GenBank file

Download region SVG

Location: 228,022 - 270,067 nt. (total: 42,046 nt) Show pHMM detection rules used

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

NRPS/PKS domains

KnownClusterBlast

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters

No matches found.

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 228021 - 270067:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg1_198

Search NORINE for peptide: strict or relaxed

AMP-binding (14..381): X

NRPSPredictor2: gly, ala

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: gly, ala
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DfftIGiIYK
Nearest Stachelhaus code:: leu
Stachelhaus code match:: 60% (weak)

QSAC01000009.1 - Region 1 - lanthipeptide-class-iv