GCA_003465385.1 - 2 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

QSAD01000001.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	NRPS-like	185,135	227,180

QSAD01000010.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 2.1	lanthipeptide-class-iv	42,955	65,612

Region	Type	From	To	Most similar known cluster	Similarity
Region 1.1	NRPS-like	185,135	227,180
Region 2.1	lanthipeptide-class-iv	42,955	65,612

No secondary metabolite regions were found in these records:: QSAD01000011.1; QSAD01000012.1; QSAD01000013.1; QSAD01000014.1; QSAD01000015.1; QSAD01000002.1; QSAD01000003.1; QSAD01000004.1; QSAD01000005.1; QSAD01000006.1; QSAD01000007.1; QSAD01000008.1; QSAD01000009.1

Compact view

QSAD01000001.1 - Region 1 - NRPS-like

Download region GenBank file

Download region SVG

Location: 185,135 - 227,180 nt. (total: 42,046 nt) Show pHMM detection rules used

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

NRPS/PKS domains

KnownClusterBlast

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters

No matches found.

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 185134 - 227180:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg1_159

Search NORINE for peptide: strict or relaxed

AMP-binding (14..381): X

NRPSPredictor2: gly, ala

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: gly, ala
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DfftIGiIYK
Nearest Stachelhaus code:: leu
Stachelhaus code match:: 60% (weak)

QSAD01000010.1 - Region 1 - lanthipeptide-class-iv