GCA_003468555.1 - 2 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

QSIM01000001.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	NRPS-like	19,701	62,712
Region 1.2	lanthipeptide-class-iv	336,394	359,051

Region	Type	From	To	Most similar known cluster	Similarity
Region 1.1	NRPS-like	19,701	62,712
Region 1.2	lanthipeptide-class-iv	336,394	359,051

No secondary metabolite regions were found in these records:: QSIM01000010.1; QSIM01000011.1; QSIM01000012.1; QSIM01000013.1; QSIM01000002.1; QSIM01000003.1; QSIM01000004.1; QSIM01000005.1; QSIM01000006.1; QSIM01000007.1; QSIM01000008.1; QSIM01000009.1

Compact view

QSIM01000001.1 - Region 1 - NRPS-like

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Location: 19,701 - 62,712 nt. (total: 43,012 nt) Show pHMM detection rules used

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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NRPS/PKS domains

KnownClusterBlast

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters

No matches found.

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 19700 - 62712:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg1_32

Search NORINE for peptide: strict or relaxed

AMP-binding (14..381): X

NRPSPredictor2: gly, ala

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: gly, ala
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DfftIGiIYK
Nearest Stachelhaus code:: leu
Stachelhaus code match:: 60% (weak)

QSIM01000001.1 - Region 2 - lanthipeptide-class-iv