GCA_003712745.1 - 2 region(s)

Identified primary metabolite regions

LKGI01000045.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 40.1	Pyruvate2acetate-formate	SCFA	182,405	205,649	Pyruvate to acetate-formate E. coli	PFL_acetate	100%

LKGI01000051.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 46.1	TPP_fatty_acids	Putative	221,870	247,570

No primary metabolite regions were found in these records:: LKGI01000001.1; LKGI01000003.1; LKGI01000004.1; LKGI01000005.1; LKGI01000006.1; LKGI01000007.1; LKGI01000008.1; LKGI01000009.1; LKGI01000010.1; LKGI01000011.1; LKGI01000012.1; LKGI01000013.1; LKGI01000014.1; LKGI01000015.1; LKGI01000017.1; LKGI01000018.1; LKGI01000019.1; LKGI01000020.1; LKGI01000021.1; LKGI01000022.1; LKGI01000024.1; LKGI01000025.1; LKGI01000026.1; LKGI01000027.1; LKGI01000028.1; LKGI01000029.1; LKGI01000030.1; LKGI01000031.1; LKGI01000033.1; LKGI01000034.1; LKGI01000035.1; LKGI01000036.1; LKGI01000037.1; LKGI01000038.1; LKGI01000039.1; LKGI01000040.1; LKGI01000042.1; LKGI01000043.1; LKGI01000044.1; LKGI01000046.1; LKGI01000047.1; LKGI01000048.1; LKGI01000049.1; LKGI01000050.1; LKGI01000052.1; LKGI01000053.1; LKGI01000054.1; LKGI01000055.1; LKGI01000056.1; LKGI01000057.1; LKGI01000058.1; LKGI01000059.1; LKGI01000060.1; LKGI01000061.1; LKGI01000062.1; LKGI01000063.1; LKGI01000064.1; LKGI01000065.1; LKGI01000066.1; LKGI01000067.1; LKGI01000068.1; LKGI01000069.1; LKGI01000070.1; LKGI01000071.1; LKGI01000072.1; LKGI01000073.1; LKGI01000074.1; LKGI01000075.1; LKGI01000076.1; LKGI01000077.1; LKGI01000078.1; LKGI01000079.1; LKGI01000080.1; LKGI01000081.1; LKGI01000082.1; LKGI01000083.1; LKGI01000084.1; LKGI01000085.1; LKGI01000086.1; LKGI01000087.1; LKGI01000088.1; LKGI01000089.1; LKGI01000090.1; LKGI01000091.1; LKGI01000092.1; LKGI01000093.1; LKGI01000094.1; LKGI01000095.1; LKGI01000097.1; LKGI01000098.1; LKGI01000099.1; LKGI01000100.1; LKGI01000101.1; LKGI01000102.1; LKGI01000104.1; LKGI01000105.1; LKGI01000106.1; LKGI01000108.1; LKGI01000109.1; LKGI01000110.1; LKGI01000112.1; LKGI01000113.1; LKGI01000114.1; LKGI01000115.1; LKGI01000116.1; LKGI01000117.1; LKGI01000118.1; LKGI01000119.1; LKGI01000120.1; LKGI01000121.1; LKGI01000122.1; LKGI01000123.1; LKGI01000126.1; LKGI01000128.1; LKGI01000129.1; LKGI01000130.1; LKGI01000132.1; LKGI01000133.1; LKGI01000134.1; LKGI01000135.1; LKGI01000137.1; LKGI01000138.1; LKGI01000139.1; LKGI01000140.1; LKGI01000141.1; LKGI01000142.1; LKGI01000144.1; LKGI01000145.1; LKGI01000148.1; LKGI01000149.1; LKGI01000150.1; LKGI01000151.1; LKGI01000154.1; LKGI01000155.1; LKGI01000156.1; LKGI01000157.1; LKGI01000158.1; LKGI01000160.1; LKGI01000161.1; LKGI01000162.1; LKGI01000163.1; LKGI01000165.1; LKGI01000166.1; LKGI01000167.1; LKGI01000168.1

Compact view

LKGI01000045.1 - Region 1 - Pyruvate2acetate-formate

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Location: 182,405 - 205,649 nt. (total: 23,245 nt) Show pHMM detection rules used

Pyruvate2acetate-formate: ((PFL_acetate1 or PFL_acetate2) and Radical_SAM)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

LKGI01000051.1 - Region 1 - TPP_fatty_acids

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Location: 221,870 - 247,570 nt. (total: 25,701 nt) Show pHMM detection rules used

TPP_fatty_acids: (TPP_enzyme_C and (minimum(2, [ACD1_car, ACP_syn_III_C, AcetylCoA_hyd_C, AcetylCoA_hydro, Acyl-CoA_dh_1, Acyl-CoA_dh_2, Butyrate_kinase, CT_Propionyl_CoA1, CT_Propionyl_CoA2, CT_Propionyl_CoA3, Carboxyl_trans, CoA_trans, CoA_trans_230_acto, CoA_trans_2_CAF, CoA_trans_6_Glutaconate, E1_dh, ECH_1, ECH_2, HBT, HBT_2, HCDH, HpaB, Ketoacyl-synt_C, Thiolase_C, Thiolase_N, adh_short, adh_short_C2]) or FA_synthesis) and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and not (POR or POR_N))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.