GCA_003712875.1 - 2 region(s)

Identified primary metabolite regions

LKGK01000045.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 44.1	Pyruvate2acetate-formate	SCFA	97,766	121,010	Pyruvate to acetate-formate E. coli	PFL_acetate	100%

LKGK01000048.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 47.1	TPP_fatty_acids	Putative	12,608	38,308

No primary metabolite regions were found in these records:: LKGK01000001.1; LKGK01000002.1; LKGK01000003.1; LKGK01000004.1; LKGK01000005.1; LKGK01000006.1; LKGK01000007.1; LKGK01000008.1; LKGK01000009.1; LKGK01000010.1; LKGK01000011.1; LKGK01000012.1; LKGK01000013.1; LKGK01000014.1; LKGK01000015.1; LKGK01000016.1; LKGK01000017.1; LKGK01000018.1; LKGK01000019.1; LKGK01000020.1; LKGK01000021.1; LKGK01000022.1; LKGK01000023.1; LKGK01000024.1; LKGK01000025.1; LKGK01000026.1; LKGK01000027.1; LKGK01000028.1; LKGK01000029.1; LKGK01000030.1; LKGK01000031.1; LKGK01000032.1; LKGK01000033.1; LKGK01000034.1; LKGK01000035.1; LKGK01000036.1; LKGK01000038.1; LKGK01000039.1; LKGK01000040.1; LKGK01000041.1; LKGK01000042.1; LKGK01000043.1; LKGK01000044.1; LKGK01000046.1; LKGK01000047.1; LKGK01000049.1; LKGK01000050.1; LKGK01000051.1; LKGK01000052.1; LKGK01000053.1; LKGK01000054.1; LKGK01000055.1; LKGK01000056.1; LKGK01000057.1; LKGK01000058.1; LKGK01000059.1; LKGK01000060.1; LKGK01000061.1; LKGK01000062.1; LKGK01000063.1; LKGK01000064.1; LKGK01000065.1; LKGK01000066.1; LKGK01000067.1; LKGK01000068.1; LKGK01000069.1; LKGK01000070.1; LKGK01000071.1; LKGK01000072.1; LKGK01000073.1; LKGK01000074.1; LKGK01000075.1; LKGK01000076.1; LKGK01000077.1; LKGK01000078.1; LKGK01000079.1; LKGK01000080.1; LKGK01000081.1; LKGK01000083.1; LKGK01000085.1; LKGK01000086.1; LKGK01000087.1; LKGK01000088.1; LKGK01000089.1; LKGK01000090.1; LKGK01000091.1; LKGK01000092.1; LKGK01000093.1; LKGK01000094.1; LKGK01000095.1; LKGK01000096.1; LKGK01000097.1; LKGK01000098.1; LKGK01000099.1; LKGK01000100.1; LKGK01000102.1; LKGK01000103.1; LKGK01000104.1; LKGK01000105.1; LKGK01000106.1; LKGK01000107.1; LKGK01000108.1; LKGK01000109.1; LKGK01000110.1; LKGK01000111.1; LKGK01000112.1; LKGK01000113.1; LKGK01000114.1; LKGK01000115.1; LKGK01000116.1; LKGK01000117.1; LKGK01000118.1; LKGK01000120.1; LKGK01000121.1; LKGK01000122.1; LKGK01000123.1; LKGK01000124.1; LKGK01000126.1; LKGK01000128.1; LKGK01000129.1; LKGK01000130.1; LKGK01000131.1; LKGK01000132.1; LKGK01000135.1; LKGK01000136.1; LKGK01000137.1; LKGK01000139.1; LKGK01000141.1; LKGK01000142.1; LKGK01000143.1; LKGK01000144.1; LKGK01000146.1; LKGK01000147.1; LKGK01000149.1; LKGK01000150.1; LKGK01000151.1

Compact view

LKGK01000045.1 - Region 1 - Pyruvate2acetate-formate

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Location: 97,766 - 121,010 nt. (total: 23,245 nt) Show pHMM detection rules used

Pyruvate2acetate-formate: ((PFL_acetate1 or PFL_acetate2) and Radical_SAM)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

LKGK01000048.1 - Region 1 - TPP_fatty_acids

Download region GenBank file

Location: 12,608 - 38,308 nt. (total: 25,701 nt) Show pHMM detection rules used

TPP_fatty_acids: (TPP_enzyme_C and (minimum(2, [ACD1_car, ACP_syn_III_C, AcetylCoA_hyd_C, AcetylCoA_hydro, Acyl-CoA_dh_1, Acyl-CoA_dh_2, Butyrate_kinase, CT_Propionyl_CoA1, CT_Propionyl_CoA2, CT_Propionyl_CoA3, Carboxyl_trans, CoA_trans, CoA_trans_230_acto, CoA_trans_2_CAF, CoA_trans_6_Glutaconate, E1_dh, ECH_1, ECH_2, HBT, HBT_2, HCDH, HpaB, Ketoacyl-synt_C, Thiolase_C, Thiolase_N, adh_short, adh_short_C2]) or FA_synthesis) and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and not (POR or POR_N))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.