GCA_003790365.1 - 2 region(s)

Identified primary metabolite regions

RJWE01000030.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 82.1	Nitrate_reductase	E-MGC	6,137	22,969	Nitrate reductase E. coli	NIR	40%

RJWE01000052.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 106.1	TPP_AA_metabolism	Putative	1	13,555

No primary metabolite regions were found in these records:: RJWE01000099.1; RJWE01000100.1; RJWE01000101.1; RJWE01000102.1; RJWE01000103.1; RJWE01000104.1; RJWE01000105.1; RJWE01000106.1; RJWE01000107.1; RJWE01000108.1; RJWE01000010.1; RJWE01000109.1; RJWE01000110.1; RJWE01000111.1; RJWE01000112.1; RJWE01000113.1; RJWE01000114.1; RJWE01000115.1; RJWE01000116.1; RJWE01000117.1; RJWE01000118.1; RJWE01000011.1; RJWE01000119.1; RJWE01000120.1; RJWE01000121.1; RJWE01000122.1; RJWE01000123.1; RJWE01000124.1; RJWE01000125.1; RJWE01000126.1; RJWE01000127.1; RJWE01000128.1; RJWE01000012.1; RJWE01000129.1; RJWE01000130.1; RJWE01000131.1; RJWE01000132.1; RJWE01000133.1; RJWE01000134.1; RJWE01000135.1; RJWE01000136.1; RJWE01000137.1; RJWE01000138.1; RJWE01000013.1; RJWE01000139.1; RJWE01000140.1; RJWE01000141.1; RJWE01000142.1; RJWE01000143.1; RJWE01000144.1; RJWE01000145.1; RJWE01000146.1; RJWE01000147.1; RJWE01000148.1; RJWE01000014.1; RJWE01000149.1; RJWE01000150.1; RJWE01000151.1; RJWE01000152.1; RJWE01000153.1; RJWE01000154.1; RJWE01000155.1; RJWE01000156.1; RJWE01000157.1; RJWE01000015.1; RJWE01000016.1; RJWE01000017.1; RJWE01000018.1; RJWE01000019.1; RJWE01000001.1; RJWE01000020.1; RJWE01000021.1; RJWE01000022.1; RJWE01000023.1; RJWE01000024.1; RJWE01000025.1; RJWE01000026.1; RJWE01000027.1; RJWE01000028.1; RJWE01000029.1; RJWE01000002.1; RJWE01000031.1; RJWE01000032.1; RJWE01000033.1; RJWE01000034.1; RJWE01000035.1; RJWE01000036.1; RJWE01000037.1; RJWE01000038.1; RJWE01000039.1; RJWE01000003.1; RJWE01000040.1; RJWE01000041.1; RJWE01000042.1; RJWE01000043.1; RJWE01000044.1; RJWE01000045.1; RJWE01000046.1; RJWE01000047.1; RJWE01000048.1; RJWE01000049.1; RJWE01000004.1; RJWE01000050.1; RJWE01000051.1; RJWE01000053.1; RJWE01000054.1; RJWE01000055.1; RJWE01000056.1; RJWE01000057.1; RJWE01000058.1; RJWE01000059.1; RJWE01000005.1; RJWE01000060.1; RJWE01000061.1; RJWE01000062.1; RJWE01000063.1; RJWE01000064.1; RJWE01000065.1; RJWE01000066.1; RJWE01000067.1; RJWE01000068.1; RJWE01000069.1; RJWE01000006.1; RJWE01000070.1; RJWE01000071.1; RJWE01000072.1; RJWE01000073.1; RJWE01000074.1; RJWE01000075.1; RJWE01000076.1; RJWE01000077.1; RJWE01000078.1; RJWE01000079.1; RJWE01000007.1; RJWE01000080.1; RJWE01000081.1; RJWE01000082.1; RJWE01000083.1; RJWE01000084.1; RJWE01000085.1; RJWE01000086.1; RJWE01000087.1; RJWE01000088.1; RJWE01000089.1; RJWE01000008.1; RJWE01000090.1; RJWE01000091.1; RJWE01000092.1; RJWE01000093.1; RJWE01000094.1; RJWE01000095.1; RJWE01000096.1; RJWE01000097.1; RJWE01000098.1; RJWE01000009.1

Compact view

RJWE01000030.1 - Region 1 - Nitrate_reductase

Download region GenBank file

Location: 6,137 - 22,969 nt. (total: 16,833 nt) Show pHMM detection rules used

Region on contig edge.

Nitrate_reductase: (Nitr_red_bet_C and Nitrate_red_del and Nitrate_red_gam and Molybdopterin and minimum(2, [Fer4_11, Molybdopterin, Molydop_binding, Nitr_red_alph_N]))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

RJWE01000052.1 - Region 1 - TPP_AA_metabolism

Download region GenBank file

Location: 1 - 13,555 nt. (total: 13,555 nt) Show pHMM detection rules used

Region on contig edge.

TPP_AA_metabolism: (TPP_enzyme_C and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or Gly_8-9_TMA or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and minimum(2, [ALS_ss_C, AlaDh_PNT_C, Arginase, BKACE, BcrAD_BadFG, Beta_elim_lyase, CPSase_L_D2, Cys_Met_Meta_PP, ELFV_dehydrog, GRDB, Glu_syn_central, Glu_synthase, Gly_reductase, HAAA1, HG2B1, HG2B2, HGD-D, HleuD1, HleuD2, HleuS1, HleuS2, Homoserine_dh, ILVD_EDD, IlvC, Lactoyl-CoA1, Lactoyl-CoA2, Lyase_aromatic, MAAL_C, OKR_DC_1_5_lysine, OKR_DC_1_5_ornithine, OKR_DC_1_7_arginine, OKR_DC_1_C, OTCace, PALP, Proline_reductase, Sacchrp_dh_C, TPL, Thr_dehydrat_C, TnaA, Urocanase]) and not (POR or POR_N or PFOR_II))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.