# emapper version: emapper-2.0.1b-2-g816e190 emapper DB: 2.0 # command: ./emapper.py -i Lactobacillus_rhamnosus/1.contigAnn/FFN/A00000150.ffn --translate --temp_dir Lactobacillus_rhamnosus/4.eggNOG_mapper --output_dir Lactobacillus_rhamnosus/4.eggNOG_mapper --output A00000150 --cpu 36 --keep_mapping_files -m diamond # time: Wed Jul 6 10:40:51 2022 #query_name seed_eggNOG_ortholog seed_ortholog_evalue seed_ortholog_score best_tax_level Preferred_name GOs EC KEGG_ko KEGG_Pathway KEGG_Module KEGG_Reaction KEGG_rclass BRITE KEGG_TC CAZy BiGG_Reaction taxonomic scope eggNOG OGs best eggNOG OG COG Functional cat. eggNOG free text desc. HOOMBAJD_00001 568703.LGG_02508 5.6e-291 1006.1 Lactobacillaceae lysS GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 6.1.1.6 ko:K04567 ko00970,map00970 M00359,M00360 R03658 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Bacteria 1TP2P@1239,3F439@33958,4H9X4@91061,COG1190@1,COG1190@2 NA|NA|NA J Belongs to the class-II aminoacyl-tRNA synthetase family HOOMBAJD_00002 568703.LGG_02509 2.9e-190 671.0 Lactobacillaceae dus ko:K05540 ko00000,ko01000,ko03016 Bacteria 1TQ2R@1239,3F4C6@33958,4HA9K@91061,COG0042@1,COG0042@2 NA|NA|NA J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines HOOMBAJD_00003 568703.LGG_02510 1.9e-161 575.1 Lactobacillaceae hslO GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006950,GO:0006979,GO:0008150,GO:0008270,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0031647,GO:0036506,GO:0042026,GO:0042802,GO:0043167,GO:0043169,GO:0044183,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0050896,GO:0065007,GO:0065008 ko:K04083 ko00000,ko03110 Bacteria 1TRCH@1239,3F42B@33958,4HAFR@91061,COG1281@1,COG1281@2 NA|NA|NA O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress HOOMBAJD_00004 568703.LGG_02514 0.0 1236.5 Lactobacillaceae ftsH GO:0003674,GO:0003824,GO:0004176,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009056,GO:0009057,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019538,GO:0030163,GO:0030428,GO:0032502,GO:0042623,GO:0043170,GO:0043934,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575 ko:K03798 M00742 ko00000,ko00002,ko01000,ko01002,ko03110 Bacteria 1TPTV@1239,3F49Z@33958,4HAJB@91061,COG0465@1,COG0465@2 NA|NA|NA O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins HOOMBAJD_00005 568703.LGG_02515 5.9e-97 360.1 Lactobacillaceae hpt GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.4.2.8 ko:K00760 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 R00190,R01132,R01229,R02142,R08237,R08238,R08245 RC00063,RC00122 ko00000,ko00001,ko01000 Bacteria 1V1C9@1239,3F56C@33958,4HFZ2@91061,COG0634@1,COG0634@2 NA|NA|NA F Belongs to the purine pyrimidine phosphoribosyltransferase family HOOMBAJD_00006 568703.LGG_02516 2.1e-241 841.3 Lactobacillaceae tilS 6.3.4.19 ko:K04075 R09597 RC02633,RC02634 ko00000,ko01000,ko03016 Bacteria 1TPXP@1239,3F4GY@33958,4H9ZM@91061,COG0037@1,COG0037@2 NA|NA|NA J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine HOOMBAJD_00007 568703.LGG_02517 5.2e-81 307.0 Lactobacillaceae yabR ko:K07570,ko:K07571 ko00000 Bacteria 1V6FE@1239,3F6HV@33958,4HIKM@91061,COG1098@1,COG1098@2 NA|NA|NA J RNA binding HOOMBAJD_00008 568703.LGG_02518 4.4e-65 253.8 Bacteria divIC ko:K05589,ko:K13052 ko00000,ko03036 Bacteria COG2919@1,COG2919@2 NA|NA|NA D cell cycle HOOMBAJD_00009 568703.LGG_02519 1.8e-38 164.9 Lactobacillaceae yabO GO:0008150,GO:0040007 Bacteria 1VEI5@1239,3F7JX@33958,4HKJJ@91061,COG1188@1,COG1188@2 NA|NA|NA J S4 domain protein HOOMBAJD_00010 568703.LGG_02520 1.6e-280 971.5 Lactobacillaceae yabM GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K03328,ko:K06409 ko00000,ko02000 2.A.66.2,2.A.66.2.14 Bacteria 1TNYX@1239,3F4BV@33958,4HACG@91061,COG2244@1,COG2244@2 NA|NA|NA S Polysaccharide biosynthesis protein HOOMBAJD_00011 568703.LGG_02521 0.0 2238.8 Lactobacillaceae mfd ko:K03723 ko03420,map03420 ko00000,ko00001,ko01000,ko03400 Bacteria 1TPF1@1239,3F4KU@33958,4H9NB@91061,COG1197@1,COG1197@2 NA|NA|NA L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site HOOMBAJD_00012 568703.LGG_02522 2.1e-102 378.3 Lactobacillaceae pth GO:0003674,GO:0003824,GO:0004045,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0016787,GO:0016788,GO:0040007,GO:0044464,GO:0052689,GO:0071944,GO:0140098,GO:0140101 3.1.1.29 ko:K01056 ko00000,ko01000,ko03012 Bacteria 1V3NB@1239,3F3VZ@33958,4HH2Z@91061,COG0193@1,COG0193@2 NA|NA|NA J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis HOOMBAJD_00013 1423732.BALS01000035_gene246 4.1e-181 640.6 Lactobacillaceae ldh 1.1.1.27 ko:K00016 ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922 R00703,R01000,R03104 RC00031,RC00044 ko00000,ko00001,ko01000,ko04147 Bacteria 1TPSY@1239,3F3RM@33958,4HB0Z@91061,COG0039@1,COG0039@2 NA|NA|NA C Belongs to the LDH MDH superfamily. LDH family HOOMBAJD_00014 568703.LGG_02524 5.9e-263 912.9 Lactobacillaceae Bacteria 1TQMA@1239,3F3QW@33958,4HDTN@91061,COG1376@1,COG1376@2 NA|NA|NA S Putative peptidoglycan binding domain HOOMBAJD_00015 568703.LGG_02525 2.9e-96 357.8 Lactobacillaceae padR Bacteria 1VC8Z@1239,3F7RS@33958,4HKXU@91061,COG1695@1,COG1695@2 NA|NA|NA K Transcriptional regulator PadR-like family HOOMBAJD_00016 568703.LGG_02526 1.1e-238 832.4 Lactobacillaceae XK27_06930 ko:K01421 ko00000 Bacteria 1TQ15@1239,3F46P@33958,4H9T9@91061,COG1511@1,COG1511@2 NA|NA|NA S ABC-2 family transporter protein HOOMBAJD_00017 568703.LGG_02527 3.4e-114 417.5 Lactobacillaceae 1.6.5.2 ko:K00355 ko00130,ko01110,ko05200,ko05225,ko05418,map00130,map01110,map05200,map05225,map05418 R02964,R03643,R03816 RC00819 ko00000,ko00001,ko01000 Bacteria 1VB36@1239,3F66F@33958,4HW64@91061,COG2249@1,COG2249@2 NA|NA|NA S Flavodoxin-like fold HOOMBAJD_00018 568703.LGG_02528 5.1e-119 433.7 Lactobacillaceae Bacteria 1TR5G@1239,3F3JY@33958,4H9ZA@91061,COG0517@1,COG0517@2 NA|NA|NA S (CBS) domain HOOMBAJD_00019 568703.LGG_02529 1.8e-130 471.9 Lactobacillaceae yciB Bacteria 1V4KP@1239,3F6PH@33958,4HIBF@91061,COG1376@1,COG1376@2 NA|NA|NA M ErfK YbiS YcfS YnhG HOOMBAJD_00020 568703.LGG_02530 1.1e-278 965.3 Lactobacillaceae gltD GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0044424,GO:0044444,GO:0044464,GO:0071944 1.4.1.13,1.4.1.14 ko:K00266 ko00250,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00910,map01100,map01110,map01120,map01130,map01230 R00093,R00114,R00248 RC00006,RC00010,RC02799 ko00000,ko00001,ko01000 iJN678.gltD,iNJ661.Rv3858c,iSB619.SA_RS02450 Bacteria 1TQ1A@1239,3FB6A@33958,4HAD5@91061,COG0493@1,COG0493@2 NA|NA|NA E Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster HOOMBAJD_00021 568703.LGG_02531 0.0 2910.9 Lactobacillaceae gltB GO:0003674,GO:0003824,GO:0004355,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006520,GO:0006536,GO:0006537,GO:0006541,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0015930,GO:0016020,GO:0016053,GO:0016491,GO:0016638,GO:0016639,GO:0019676,GO:0019740,GO:0019752,GO:0040007,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045181,GO:0046394,GO:0055114,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.4.1.13,1.4.1.14,1.4.7.1,2.1.1.21 ko:K00265,ko:K00284,ko:K22083 ko00250,ko00630,ko00680,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00630,map00680,map00910,map01100,map01110,map01120,map01130,map01230 R00021,R00093,R00114,R00248,R01586,R10086 RC00006,RC00010,RC00554,RC02799 ko00000,ko00001,ko01000 iBWG_1329.BWG_2914,iECDH10B_1368.ECDH10B_3387,iECDH1ME8569_1439.EcDH1_0495,iEcDH1_1363.EcDH1_0495,iPC815.YPO3557 Bacteria 1TQ0B@1239,3F4TU@33958,4HA4G@91061,COG0067@1,COG0067@2,COG0069@1,COG0069@2,COG0070@1,COG0070@2 NA|NA|NA E GXGXG motif HOOMBAJD_00022 568703.LGG_02532 1.2e-86 325.9 Lactobacillaceae Bacteria 1V463@1239,3FCEF@33958,4HH0P@91061,COG4708@1,COG4708@2 NA|NA|NA S QueT transporter HOOMBAJD_00023 568703.LGG_00891 3.7e-13 80.9 Lactobacillaceae Bacteria 1U8CV@1239,2BT3F@1,32N80@2,3FAUG@33958,4IIAU@91061 NA|NA|NA HOOMBAJD_00024 1423732.BALS01000035_gene242 5.6e-62 243.4 Lactobacillaceae ndoA ko:K07171 ko00000,ko01000,ko02048 Bacteria 1V6DK@1239,3F6Y9@33958,4HGXF@91061,COG2337@1,COG2337@2 NA|NA|NA L Toxic component of a toxin-antitoxin (TA) module HOOMBAJD_00025 568703.LGG_02535 2.4e-37 161.0 Lactobacillaceae Bacteria 1U736@1239,29PVB@1,30ATJ@2,3F8WZ@33958,4IGXQ@91061 NA|NA|NA HOOMBAJD_00026 568703.LGG_02536 1.6e-216 758.4 Lactobacillaceae alr 5.1.1.1 ko:K01775 ko00473,ko01100,ko01502,map00473,map01100,map01502 R00401 RC00285 ko00000,ko00001,ko01000,ko01011 Bacteria 1TNYY@1239,3F3X2@33958,4HA95@91061,COG0787@1,COG0787@2 NA|NA|NA E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids HOOMBAJD_00027 568703.LGG_02537 1.7e-63 248.4 Lactobacillaceae acpS 2.7.6.3,2.7.8.7,5.1.1.1 ko:K00950,ko:K00997,ko:K01775 ko00473,ko00770,ko00790,ko01100,ko01502,map00473,map00770,map00790,map01100,map01502 M00126,M00841 R00401,R01625,R03503 RC00002,RC00017,RC00285 ko00000,ko00001,ko00002,ko01000,ko01011 iYO844.BSU04620 Bacteria 1VA0T@1239,3F6HC@33958,4HKBI@91061,COG0736@1,COG0736@2 NA|NA|NA I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein HOOMBAJD_00028 568703.LGG_02538 4.5e-264 916.8 Lactobacillaceae cshA GO:0000166,GO:0003674,GO:0003676,GO:0003723,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006725,GO:0006807,GO:0006950,GO:0008026,GO:0008144,GO:0008150,GO:0008152,GO:0008186,GO:0009266,GO:0009295,GO:0009409,GO:0009628,GO:0009987,GO:0010501,GO:0016020,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043590,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0070035,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:1901265,GO:1901360,GO:1901363 3.6.4.13 ko:K05592,ko:K18692 ko03018,map03018 ko00000,ko00001,ko01000,ko03009,ko03019 Bacteria 1TPAP@1239,3F46Q@33958,4HAB3@91061,COG0513@1,COG0513@2 NA|NA|NA F DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity HOOMBAJD_00029 568703.LGG_02539 5.6e-261 906.4 Lactobacillaceae murF 6.3.2.10,6.3.2.13 ko:K01928,ko:K01929 ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502 R02788,R04573,R04617 RC00064,RC00090,RC00141 ko00000,ko00001,ko01000,ko01011 Bacteria 1VT78@1239,3F4SK@33958,4HACR@91061,COG0770@1,COG0770@2 NA|NA|NA M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein HOOMBAJD_00030 568703.LGG_02540 3.3e-146 524.2 Lactobacillaceae Bacteria 1V46E@1239,29SV9@1,30E1E@2,3F6E2@33958,4HI7R@91061 NA|NA|NA HOOMBAJD_00031 568703.LGG_02541 1.9e-123 448.4 Lactobacillaceae Bacteria 1VQ45@1239,3F62R@33958,4HRFF@91061,COG0457@1,COG0457@2 NA|NA|NA S Tetratricopeptide repeat HOOMBAJD_00032 568703.LGG_02542 1.7e-122 445.3 Lactobacillaceae Bacteria 1V8QF@1239,2DNW7@1,32ZGM@2,3F601@33958,4HIIB@91061 NA|NA|NA HOOMBAJD_00033 568703.LGG_02543 6.7e-72 276.6 Lactobacillaceae Bacteria 1U7DP@1239,29Q2X@1,30B1I@2,3F9FK@33958,4IH9K@91061 NA|NA|NA HOOMBAJD_00034 568703.LGG_02544 3.3e-42 177.2 Lactobacillaceae rpmE2 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006950,GO:0007154,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009267,GO:0009605,GO:0009987,GO:0009991,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0031667,GO:0031668,GO:0031669,GO:0032991,GO:0033554,GO:0034224,GO:0034641,GO:0034645,GO:0042594,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050896,GO:0051716,GO:0071496,GO:0071704,GO:0120127,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02909 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1VEGU@1239,3F7D7@33958,4HKF0@91061,COG0254@1,COG0254@2 NA|NA|NA J Ribosomal protein L31 HOOMBAJD_00035 568703.LGG_02545 7.4e-236 822.8 Lactobacillaceae murA GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008760,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016740,GO:0016765,GO:0030203,GO:0034645,GO:0042221,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046677,GO:0050896,GO:0051716,GO:0070589,GO:0070887,GO:0071236,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 2.5.1.7 ko:K00790 ko00520,ko00550,ko01100,map00520,map00550,map01100 R00660 RC00350 ko00000,ko00001,ko01000,ko01011 iYO844.BSU37100 Bacteria 1TPAU@1239,3F3P8@33958,4H9KI@91061,COG0766@1,COG0766@2 NA|NA|NA M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine HOOMBAJD_00037 568703.LGG_02546 0.0 1075.8 Lactobacillaceae pyrG GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0044464,GO:0071944 6.3.4.2 ko:K01937 ko00240,ko01100,map00240,map01100 M00052 R00571,R00573 RC00010,RC00074 ko00000,ko00001,ko00002,ko01000 iHN637.CLJU_RS01075,iNJ661.Rv1699 Bacteria 1TP34@1239,3F42X@33958,4H9X6@91061,COG0504@1,COG0504@2 NA|NA|NA F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates HOOMBAJD_00038 568703.LGG_02547 5.9e-219 766.5 Lactobacillaceae ndh GO:0003674,GO:0003824,GO:0003955,GO:0006091,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016491,GO:0016651,GO:0016655,GO:0019646,GO:0022900,GO:0022904,GO:0044237,GO:0045333,GO:0055114 1.6.99.3 ko:K03885 ko00190,map00190 ko00000,ko00001,ko01000 Bacteria 1TR6X@1239,3F4N1@33958,4HA14@91061,COG1252@1,COG1252@2 NA|NA|NA C NADH dehydrogenase HOOMBAJD_00041 568703.LGG_02550 7.9e-152 543.1 Lactobacillaceae Bacteria 1VNI3@1239,3F5J9@33958,4HSHZ@91061,COG3548@1,COG3548@2 NA|NA|NA S Protein of unknown function (DUF1211) HOOMBAJD_00042 568703.LGG_02551 5.9e-62 244.2 Lactobacillaceae rpoE GO:0003674,GO:0003824,GO:0003899,GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 ko:K03048 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 M00183 R00435,R00441,R00442,R00443 RC02795 br01611,ko00000,ko00001,ko00002,ko03021,ko03400 Bacteria 1V6WX@1239,3F55D@33958,4HIUK@91061,COG3343@1,COG3343@2 NA|NA|NA K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling HOOMBAJD_00043 568703.LGG_02552 3.5e-79 300.8 Lactobacillaceae ywiB Bacteria 1V8IZ@1239,3F6AI@33958,4HIW0@91061,COG4506@1,COG4506@2 NA|NA|NA S Domain of unknown function (DUF1934) HOOMBAJD_00044 568703.LGG_02554 4.6e-157 560.5 Lactobacillaceae lipL GO:0003674,GO:0003824,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009249,GO:0009987,GO:0010467,GO:0016053,GO:0016415,GO:0016740,GO:0016746,GO:0016747,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0051604,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901576 2.3.1.200,2.3.1.204 ko:K16869,ko:K18821 ko00000,ko01000 Bacteria 1TQKA@1239,3F575@33958,4HCPS@91061,COG0095@1,COG0095@2 NA|NA|NA H biotin lipoate A B protein ligase HOOMBAJD_00045 568703.LGG_02555 7.4e-266 922.5 Lactobacillaceae ywfO GO:0003674,GO:0003824,GO:0006139,GO:0006163,GO:0006195,GO:0006203,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008832,GO:0009056,GO:0009058,GO:0009117,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009151,GO:0009155,GO:0009166,GO:0009200,GO:0009204,GO:0009215,GO:0009217,GO:0009262,GO:0009264,GO:0009394,GO:0009987,GO:0016787,GO:0016788,GO:0016793,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042578,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046070,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576 ko:K06885 ko00000 Bacteria 1TPVB@1239,3F442@33958,4HAX8@91061,COG1078@1,COG1078@2 NA|NA|NA S HD domain protein HOOMBAJD_00046 568703.LGG_02556 2.4e-83 314.7 Lactobacillaceae mutT 3.5.4.33,3.6.1.13,3.6.1.55 ko:K01515,ko:K03574,ko:K11991 ko00230,map00230 R01054,R10223 RC00002,RC00477 ko00000,ko00001,ko01000,ko03016,ko03400 Bacteria 1VD6I@1239,3F75N@33958,4HKRW@91061,COG0494@1,COG0494@2 NA|NA|NA L NUDIX domain HOOMBAJD_00047 568703.LGG_02557 5.9e-178 630.2 Lactobacillaceae Bacteria 1UR34@1239,3F4J5@33958,4HDF2@91061,COG1434@1,COG1434@2 NA|NA|NA S DUF218 domain HOOMBAJD_00048 568703.LGG_02558 1.8e-60 238.4 Lactobacillaceae mscL GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006884,GO:0008150,GO:0008361,GO:0008381,GO:0009987,GO:0009992,GO:0015267,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0022803,GO:0022836,GO:0022857,GO:0030104,GO:0031224,GO:0031226,GO:0032535,GO:0042592,GO:0042802,GO:0044425,GO:0044459,GO:0044464,GO:0048878,GO:0051179,GO:0051234,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071840,GO:0071944,GO:0090066 ko:K03282 ko00000,ko02000 1.A.22.1 Bacteria 1VA14@1239,3F6YZ@33958,4HKIA@91061,COG1970@1,COG1970@2 NA|NA|NA M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell HOOMBAJD_00049 568703.LGG_02559 1.6e-73 282.0 Lactobacillaceae Bacteria 1U7NH@1239,29Q81@1,30B72@2,3F9YA@33958,4IHJT@91061 NA|NA|NA HOOMBAJD_00050 568703.LGG_02560 7.4e-19 99.0 Lactobacillaceae nudA Bacteria 1VEJD@1239,3F8KY@33958,4HNU5@91061,COG4043@1,COG4043@2 NA|NA|NA S ASCH HOOMBAJD_00051 568703.LGG_02561 1e-176 625.9 Lactobacillaceae prs 2.7.6.1 ko:K00948 ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230 M00005 R01049 RC00002,RC00078 ko00000,ko00001,ko00002,ko01000 iAF987.Gmet_2848 Bacteria 1TQ6Q@1239,3F3U2@33958,4HB61@91061,COG0462@1,COG0462@2 NA|NA|NA F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) HOOMBAJD_00052 568703.LGG_02562 1.1e-211 742.7 Lactobacillaceae glmU GO:0000270,GO:0000271,GO:0000287,GO:0003674,GO:0003824,GO:0003977,GO:0005488,GO:0005975,GO:0005976,GO:0006022,GO:0006023,GO:0006024,GO:0006629,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0009058,GO:0009059,GO:0009103,GO:0009252,GO:0009273,GO:0009987,GO:0016051,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0016772,GO:0016779,GO:0019134,GO:0022610,GO:0030203,GO:0030260,GO:0033692,GO:0034637,GO:0034645,GO:0035635,GO:0040007,GO:0042546,GO:0043167,GO:0043169,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044403,GO:0044406,GO:0044409,GO:0044419,GO:0044650,GO:0046872,GO:0051701,GO:0051704,GO:0051806,GO:0051828,GO:0070569,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1903509 2.3.1.157,2.7.7.23 ko:K04042,ko:K11528 ko00520,ko01100,ko01130,map00520,map01100,map01130 M00362 R00416,R05332 RC00002,RC00004,RC00166 ko00000,ko00001,ko00002,ko01000 Bacteria 1TP88@1239,3F4I3@33958,4H9V5@91061,COG1207@1,COG1207@2 NA|NA|NA M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain HOOMBAJD_00053 568703.LGG_02563 3.5e-219 767.3 Lactobacillaceae ysaA Bacteria 1V04Y@1239,3F3SH@33958,4HDS5@91061,COG4767@1,COG4767@2 NA|NA|NA V RDD family HOOMBAJD_00054 568703.LGG_02564 1.3e-151 542.3 Lactobacillaceae purR 2.4.2.22,2.4.2.7 ko:K00759,ko:K03816,ko:K09685 ko00230,ko01100,ko01110,map00230,map01100,map01110 R00190,R01229,R02142,R04378 RC00063,RC00122 ko00000,ko00001,ko01000,ko03000,ko04147 Bacteria 1TPN9@1239,3F3NH@33958,4HB8I@91061,COG0503@1,COG0503@2 NA|NA|NA F pur operon repressor HOOMBAJD_00055 568703.LGG_02565 6.5e-119 433.3 Lactobacillaceae ybbL GO:0005575,GO:0005623,GO:0005886,GO:0006873,GO:0006875,GO:0006879,GO:0008150,GO:0009987,GO:0016020,GO:0019725,GO:0030003,GO:0042592,GO:0044464,GO:0046916,GO:0048878,GO:0050801,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0065007,GO:0065008,GO:0071944,GO:0098771 ko:K02065,ko:K02068 ko02010,map02010 M00210,M00211,M00669,M00670 ko00000,ko00001,ko00002,ko02000 3.A.1.27 Bacteria 1V3DQ@1239,3F4UY@33958,4HHGU@91061,COG4619@1,COG4619@2 NA|NA|NA S ABC transporter, ATP-binding protein HOOMBAJD_00056 568703.LGG_02566 3.3e-122 444.5 Lactobacillaceae ybbM GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006873,GO:0006875,GO:0006879,GO:0008150,GO:0009987,GO:0015075,GO:0016020,GO:0016021,GO:0019725,GO:0022857,GO:0030003,GO:0031224,GO:0031226,GO:0034220,GO:0042592,GO:0044425,GO:0044459,GO:0044464,GO:0046916,GO:0048878,GO:0050801,GO:0051179,GO:0051234,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071944,GO:0098771 ko:K02069 M00211 ko00000,ko00002,ko02000 9.B.25.1 Bacteria 1UY1N@1239,3F4P1@33958,4HDM4@91061,COG0390@1,COG0390@2 NA|NA|NA S Uncharacterised protein family (UPF0014) HOOMBAJD_00057 568703.LGG_02567 6.7e-159 566.6 Lactobacillaceae czcD ko:K16264 ko00000,ko02000 2.A.4.1 Bacteria 1TR92@1239,3F4KJ@33958,4HBCQ@91061,COG1230@1,COG1230@2 NA|NA|NA P cation diffusion facilitator family transporter HOOMBAJD_00058 568703.LGG_02568 5.8e-163 580.1 Lactobacillaceae ispE GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0006629,GO:0006720,GO:0006793,GO:0006796,GO:0008144,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017076,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0050515,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1901576 2.1.1.182,2.7.1.148 ko:K00919,ko:K02528,ko:K16924 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 M00096,M00582 R05634,R10716 RC00002,RC00003,RC01439,RC03257 ko00000,ko00001,ko00002,ko01000,ko02000,ko03009 3.A.1.29 iEC55989_1330.EC55989_1304,iLJ478.TM1383,iYO844.BSU00460 Bacteria 1TPXV@1239,3F43W@33958,4HAV8@91061,COG1947@1,COG1947@2 NA|NA|NA F Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol HOOMBAJD_00059 568703.LGG_02569 1.1e-37 162.2 Lactobacillaceae veg Bacteria 1VEQM@1239,3F7D3@33958,4HKF8@91061,COG4466@1,COG4466@2 NA|NA|NA S Biofilm formation stimulator VEG HOOMBAJD_00060 568703.LGG_02571 1.4e-153 548.9 Lactobacillaceae ksgA GO:0000154,GO:0000179,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.182 ko:K02528 R10716 RC00003,RC03257 ko00000,ko01000,ko03009 Bacteria 1TP9W@1239,3F3VC@33958,4HA4R@91061,COG0030@1,COG0030@2 NA|NA|NA J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits HOOMBAJD_00061 568703.LGG_02572 1.6e-97 362.1 Lactobacillaceae rnmV GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0022613,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043822,GO:0044085,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360 3.1.26.8 ko:K05985,ko:K07476 ko00000,ko01000 Bacteria 1V3K3@1239,3F64F@33958,4HH5Y@91061,COG1658@1,COG1658@2 NA|NA|NA J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step HOOMBAJD_00062 568703.LGG_02573 1.3e-145 522.3 Lactobacillaceae tatD GO:0003674,GO:0003824,GO:0004518,GO:0004536,GO:0006139,GO:0006259,GO:0006308,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016787,GO:0016788,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901361,GO:1901575 ko:K03424 ko00000,ko01000 Bacteria 1TNY1@1239,3F3N2@33958,4HA74@91061,COG0084@1,COG0084@2 NA|NA|NA L hydrolase, TatD family HOOMBAJD_00063 568703.LGG_02574 7.7e-80 303.1 Bacteria manR 2.7.1.194,2.7.1.200,2.7.1.202 ko:K02538,ko:K02768,ko:K02769,ko:K02770,ko:K02773,ko:K02806,ko:K02821,ko:K03491 ko00051,ko00052,ko00053,ko01100,ko01120,ko02060,map00051,map00052,map00053,map01100,map01120,map02060 M00273,M00279,M00283,M00550 R03232,R05570,R07671 RC00017,RC03206 ko00000,ko00001,ko00002,ko01000,ko02000,ko03000 4.A.2.1,4.A.5.1,4.A.7.1 Bacteria COG1762@1,COG1762@2 NA|NA|NA G phosphoenolpyruvate-dependent sugar phosphotransferase system HOOMBAJD_00064 568703.LGG_02575 9.5e-186 656.0 Lactobacillaceae yihT GO:0003674,GO:0003824,GO:0006066,GO:0006082,GO:0006790,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016054,GO:0016829,GO:0016830,GO:0016832,GO:0019637,GO:0034308,GO:0042180,GO:0044237,GO:0044248,GO:0044273,GO:0044281,GO:0044282,GO:0061595,GO:0061720,GO:0071704,GO:1901135,GO:1901136,GO:1901575,GO:1901615,GO:1902776,GO:1902777 4.1.2.40,4.1.2.57 ko:K01635,ko:K01671 ko00052,ko01100,ko02024,map00052,map01100,map02024 R01069,R10760 RC00438,RC00439 ko00000,ko00001,ko01000 Bacteria 1TQRR@1239,3F3UA@33958,4HBS9@91061,COG3684@1,COG3684@2 NA|NA|NA G Belongs to the aldolase LacD family HOOMBAJD_00065 568703.LGG_02577 6.9e-172 609.8 Lactobacillaceae yqhA Bacteria 1V3WP@1239,3F5RU@33958,4HHIH@91061,COG2017@1,COG2017@2 NA|NA|NA G Aldose 1-epimerase HOOMBAJD_00066 568703.LGG_02578 3e-125 454.5 Lactobacillaceae Bacteria 1TRDQ@1239,3FC2V@33958,4HP0H@91061,COG3279@1,COG3279@2 NA|NA|NA T LytTr DNA-binding domain HOOMBAJD_00067 568703.LGG_02579 4.5e-166 590.5 Lactobacillaceae 2.7.13.3 ko:K02476,ko:K07706 ko02020,ko02024,map02020,map02024 M00495 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Bacteria 1UZ9P@1239,3F5Q1@33958,4HQIT@91061,COG3290@1,COG3290@2 NA|NA|NA T GHKL domain HOOMBAJD_00068 568703.LGG_02580 0.0 1133.6 Lactobacillaceae ko:K06147 ko00000,ko02000 3.A.1.106,3.A.1.109,3.A.1.21 Bacteria 1TPZP@1239,3F604@33958,4HDMH@91061,COG1132@1,COG1132@2 NA|NA|NA V ABC transporter HOOMBAJD_00069 568703.LGG_02581 0.0 1203.0 Lactobacillaceae ko:K06147 ko00000,ko02000 3.A.1.106,3.A.1.109,3.A.1.21 Bacteria 1TPZP@1239,3F53S@33958,4HDMH@91061,COG1132@1,COG1132@2 NA|NA|NA V ABC transporter HOOMBAJD_00070 568703.LGG_02582 4.1e-30 136.7 Bacilli ko:K07729 ko00000,ko03000 Bacteria 1VEGF@1239,4HNVM@91061,COG1476@1,COG1476@2 NA|NA|NA K Transcriptional HOOMBAJD_00071 568703.LGG_02583 2.2e-65 255.0 Lactobacillaceae Bacteria 1U7RD@1239,2A74U@1,30W0N@2,3FA2B@33958,4IHNR@91061 NA|NA|NA HOOMBAJD_00072 568703.LGG_02584 0.0 1333.5 Lactobacillaceae metG GO:0003674,GO:0003824,GO:0004812,GO:0004825,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006431,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0040007,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.10 ko:K01874 ko00450,ko00970,map00450,map00970 M00359,M00360 R03659,R04773 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Bacteria 1TPA1@1239,3F3XR@33958,4H9VC@91061,COG0143@1,COG0143@2 NA|NA|NA J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation HOOMBAJD_00073 568703.LGG_02587 1e-171 609.4 Lactobacillaceae pepI 3.4.11.5,3.5.1.101 ko:K01259,ko:K18457 ko00330,map00330 R00135 ko00000,ko00001,ko01000,ko01002 Bacteria 1TRMT@1239,3F40N@33958,4HE23@91061,COG2267@1,COG2267@2 NA|NA|NA E Releases the N-terminal proline from various substrates HOOMBAJD_00074 568703.LGG_02589 1.1e-150 539.3 Lactobacillaceae yunF Bacteria 1TPX4@1239,3F40Y@33958,4HA0X@91061,COG1801@1,COG1801@2 NA|NA|NA F Protein of unknown function DUF72 HOOMBAJD_00075 568703.LGG_02590 1.1e-91 342.4 Lactobacillaceae 3.6.1.55 ko:K03574 ko00000,ko01000,ko03400 Bacteria 1VAC7@1239,3F7HC@33958,4HKN6@91061,COG1051@1,COG1051@2 NA|NA|NA F NUDIX domain HOOMBAJD_00076 568703.LGG_02591 1.5e-169 602.1 Lactobacillaceae ldh 1.1.1.27 ko:K00016 ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922 R00703,R01000,R03104 RC00031,RC00044 ko00000,ko00001,ko01000,ko04147 Bacteria 1UXY2@1239,3F4M2@33958,4HD1S@91061,COG0039@1,COG0039@2 NA|NA|NA C Belongs to the LDH MDH superfamily HOOMBAJD_00077 568703.LGG_02592 5.3e-107 393.7 Lactobacillaceae yiiE Bacteria 1VAQZ@1239,3F6Q5@33958,4HJFH@91061,COG3548@1,COG3548@2 NA|NA|NA S Protein of unknown function (DUF1211) HOOMBAJD_00078 568703.LGG_02593 2.2e-128 464.9 Lactobacillaceae cobB ko:K12410 ko00000,ko01000 Bacteria 1TQKD@1239,3FC3Y@33958,4HGHS@91061,COG0846@1,COG0846@2 NA|NA|NA K Sir2 family HOOMBAJD_00079 568703.LGG_02594 1.2e-07 60.8 Lactobacillaceae Bacteria 1U8GG@1239,29QQH@1,30BQA@2,3FAYF@33958,4IIE9@91061 NA|NA|NA HOOMBAJD_00080 568703.LGG_02595 5.7e-169 600.1 Lactobacillaceae Bacteria 1VT7R@1239,296WI@1,2ZU5A@2,3F4R1@33958,4HVBN@91061 NA|NA|NA HOOMBAJD_00081 568703.LGG_02596 1.9e-97 361.7 Lactobacillaceae yxkA ko:K06910 ko00000 Bacteria 1VJEE@1239,3F75J@33958,4HXTJ@91061,COG1881@1,COG1881@2 NA|NA|NA S Phosphatidylethanolamine-binding protein HOOMBAJD_00083 568703.LGG_02598 4.2e-162 577.4 Lactobacillaceae ypuA Bacteria 1TR2I@1239,3FBNF@33958,4HBVZ@91061,COG4086@1,COG4086@2 NA|NA|NA S Protein of unknown function (DUF1002) HOOMBAJD_00084 568703.LGG_02599 2.5e-172 611.3 Lactobacillaceae ppx 3.6.1.11,3.6.1.40 ko:K01524 ko00230,map00230 R03409 RC00002 ko00000,ko00001,ko01000 Bacteria 1TS3I@1239,3F3SR@33958,4HAQS@91061,COG0248@1,COG0248@2 NA|NA|NA FP exopolyphosphatase HOOMBAJD_00085 568703.LGG_02600 0.0 1428.7 Lactobacillaceae ppk GO:0000287,GO:0001666,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006979,GO:0007154,GO:0008150,GO:0008152,GO:0008976,GO:0009267,GO:0009405,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0015968,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0019538,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0036211,GO:0036293,GO:0040007,GO:0042594,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044419,GO:0044464,GO:0046777,GO:0046872,GO:0050896,GO:0051704,GO:0051716,GO:0070482,GO:0071496,GO:0071704,GO:0071944,GO:1901564 2.7.4.1 ko:K00937 ko00190,ko03018,map00190,map03018 ko00000,ko00001,ko01000,ko03019 iJN746.PP_5217 Bacteria 1TNZM@1239,3F3PE@33958,4HA88@91061,COG0855@1,COG0855@2 NA|NA|NA P Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) HOOMBAJD_00086 568703.LGG_02601 2.8e-285 987.3 Lactobacillaceae ppx3 3.6.1.11,3.6.1.40 ko:K01524 ko00230,map00230 R03409 RC00002 ko00000,ko00001,ko01000 Bacteria 1VT8Q@1239,3F49N@33958,4HB84@91061,COG0248@1,COG0248@2 NA|NA|NA FP exopolyphosphatase HOOMBAJD_00087 568703.LGG_02602 1e-173 615.9 Lactobacillaceae Bacteria 1TQ12@1239,3F4U1@33958,4HA57@91061,COG4989@1,COG4989@2 NA|NA|NA S Aldo keto reductase HOOMBAJD_00088 568703.LGG_02603 9.3e-155 552.7 Lactobacillaceae bioC 2.1.1.187,2.1.1.197 ko:K00563,ko:K02169 ko00780,ko01100,map00780,map01100 M00572 R07233,R09543 RC00003,RC00460 ko00000,ko00001,ko00002,ko01000,ko03009 Bacteria 1TT22@1239,3F99K@33958,4HBCP@91061,COG0500@1,COG0500@2 NA|NA|NA Q Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) HOOMBAJD_00089 568703.LGG_02604 1.7e-90 338.6 Lactobacillaceae ywnH GO:0003674,GO:0003824,GO:0006464,GO:0006473,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016740,GO:0016746,GO:0016747,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0043543,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:1901564 2.3.1.183 ko:K03823 ko00440,ko01130,map00440,map01130 R08871,R08938 RC00004,RC00064 ko00000,ko00001,ko01000 Bacteria 1V3V3@1239,3F70T@33958,4HHNY@91061,COG1247@1,COG1247@2 NA|NA|NA M Acetyltransferase (GNAT) domain HOOMBAJD_00090 568703.LGG_02605 1e-238 832.4 Lactobacillaceae dinF Bacteria 1TNZN@1239,3FC3X@33958,4HANM@91061,COG0534@1,COG0534@2 NA|NA|NA V MatE HOOMBAJD_00091 568703.LGG_02607 1.2e-109 402.9 Lactobacillaceae ko:K06872,ko:K07507 ko00000,ko02000 9.B.20 Bacteria 1V5YF@1239,3F5HD@33958,4HJVB@91061,COG1512@1,COG1512@2 NA|NA|NA S TPM domain HOOMBAJD_00092 568703.LGG_02608 8.9e-102 376.3 Lactobacillaceae lemA ko:K03744 ko00000 Bacteria 1V3Z0@1239,3FCF0@33958,4HH6X@91061,COG1704@1,COG1704@2 NA|NA|NA S LemA family HOOMBAJD_00093 568703.LGG_02609 6.3e-193 679.9 Lactobacillaceae trpS GO:0003674,GO:0003824,GO:0004812,GO:0004830,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006436,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.2 ko:K01867 ko00970,map00970 M00359,M00360 R03664 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Bacteria 1TPY7@1239,3F3V6@33958,4HA1K@91061,COG0180@1,COG0180@2 NA|NA|NA J Belongs to the class-I aminoacyl-tRNA synthetase family HOOMBAJD_00094 748671.LCRIS_00116 1.2e-73 283.9 Lactobacillaceae Bacteria 1UMZG@1239,3F6CJ@33958,4IU42@91061,COG0477@1,COG2814@2 NA|NA|NA EGP Major Facilitator Superfamily HOOMBAJD_00095 568703.LGG_02615 2.3e-251 874.4 Lactobacillaceae gshR 1.8.1.7 ko:K00383 ko00480,ko04918,map00480,map04918 R00094,R00115 RC00011 ko00000,ko00001,ko01000 Bacteria 1TS0Z@1239,3F3K2@33958,4HBYB@91061,COG1249@1,COG1249@2 NA|NA|NA C Glutathione reductase HOOMBAJD_00096 568703.LGG_02616 1.7e-176 625.2 Lactobacillaceae proV ko:K05847 ko02010,map02010 M00209 ko00000,ko00001,ko00002,ko02000 3.A.1.12 Bacteria 1TPV8@1239,3F55H@33958,4H9SI@91061,COG1125@1,COG1125@2 NA|NA|NA E ABC transporter, ATP-binding protein HOOMBAJD_00097 568703.LGG_02617 8.9e-276 955.7 Lactobacillaceae proWX ko:K05845,ko:K05846 ko02010,map02010 M00209 ko00000,ko00001,ko00002,ko02000 3.A.1.12 Bacteria 1TQ7D@1239,3F44S@33958,4HBDR@91061,COG1174@1,COG1174@2,COG1732@1,COG1732@2 NA|NA|NA EM Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) HOOMBAJD_00098 568703.LGG_02619 0.0 1395.6 Lactobacillaceae helD 3.6.4.12 ko:K03657 ko03420,ko03430,map03420,map03430 ko00000,ko00001,ko01000,ko03400 Bacteria 1TP39@1239,3F486@33958,4H9Y5@91061,COG3973@1,COG3973@2 NA|NA|NA L DNA helicase HOOMBAJD_00099 568703.LGG_02620 1.5e-147 528.9 Lactobacillaceae rlrG ko:K21900 ko00000,ko03000 Bacteria 1TP6T@1239,3F4VC@33958,4HC4T@91061,COG0583@1,COG0583@2 NA|NA|NA K Transcriptional regulator HOOMBAJD_00100 568703.LGG_02621 1.1e-175 622.5 Lactobacillaceae shetA ko:K03304,ko:K11041 ko05150,map05150 ko00000,ko00001,ko02000,ko02042 2.A.16,2.A.16.1 Bacteria 1UYTE@1239,3FBRC@33958,4HGBI@91061,COG1275@1,COG1275@2 NA|NA|NA P Voltage-dependent anion channel HOOMBAJD_00101 568703.LGG_02622 1.5e-135 488.8 Lactobacillaceae nodJ ko:K09694 ko02010,map02010 M00252 ko00000,ko00001,ko00002,ko02000 3.A.1.102 Bacteria 1TSWD@1239,3F66C@33958,4HB6Z@91061,COG0842@1,COG0842@2 NA|NA|NA V ABC-2 type transporter HOOMBAJD_00102 568703.LGG_02623 3.2e-133 481.1 Lactobacillaceae nodI ko:K01990,ko:K09695 ko02010,map02010 M00252,M00254 ko00000,ko00001,ko00002,ko02000 3.A.1,3.A.1.102 Bacteria 1TPMQ@1239,3FBDQ@33958,4IPMF@91061,COG1131@1,COG1131@2 NA|NA|NA V ABC transporter HOOMBAJD_00103 568703.LGG_02624 6.8e-130 469.9 Lactobacillaceae ydfF GO:0003674,GO:0003676,GO:0003677,GO:0003700,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0010035,GO:0010038,GO:0010288,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0032791,GO:0042221,GO:0043167,GO:0043169,GO:0046686,GO:0046870,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097063,GO:0097159,GO:0140110,GO:1901363,GO:1903506,GO:2000112,GO:2001141 Bacteria 1V007@1239,3F7E5@33958,4HDXJ@91061,COG0640@1,COG0640@2 NA|NA|NA K Transcriptional HOOMBAJD_00104 568703.LGG_02625 1.2e-109 402.5 Lactobacillaceae ko:K07052 ko00000 Bacteria 1VFRX@1239,3F4Q0@33958,4HRQQ@91061,COG1266@1,COG1266@2 NA|NA|NA S CAAX protease self-immunity HOOMBAJD_00106 568703.LGG_02626 1.7e-277 961.4 Lactobacillaceae ko:K06147,ko:K06148 ko00000,ko02000 3.A.1,3.A.1.106,3.A.1.109,3.A.1.21 Bacteria 1TSRV@1239,3F4EQ@33958,4HCIZ@91061,COG1132@1,COG1132@2 NA|NA|NA V ABC transporter transmembrane region HOOMBAJD_00107 568703.LGG_02627 6.7e-108 396.7 Lactobacillaceae ypgQ ko:K06950 ko00000 Bacteria 1V7IZ@1239,3F3PN@33958,4HIVB@91061,COG1418@1,COG1418@2 NA|NA|NA S Metal dependent phosphohydrolases with conserved 'HD' motif. HOOMBAJD_00108 568703.LGG_02628 7.2e-71 273.1 Lactobacillaceae Bacteria 1U7IQ@1239,29Q5J@1,30B4H@2,3F9S0@33958,4IHFG@91061 NA|NA|NA K MarR family HOOMBAJD_00109 568703.LGG_02629 0.0 1663.7 Lactobacillaceae uvrA3 ko:K03701 ko03420,map03420 ko00000,ko00001,ko03400 Bacteria 1TP0A@1239,3FC8R@33958,4HTKA@91061,COG0178@1,COG0178@2 NA|NA|NA L excinuclease ABC HOOMBAJD_00110 568703.LGG_02630 1.4e-192 678.7 Lactobacillaceae yghZ ko:K19265 ko00000,ko01000 Bacteria 1TRS0@1239,3F414@33958,4HAZ2@91061,COG0667@1,COG0667@2 NA|NA|NA C Aldo keto reductase family protein HOOMBAJD_00111 568703.LGG_02631 3.4e-141 507.7 Lactobacillaceae Bacteria 1V8IN@1239,3F5CU@33958,4HJUX@91061,COG0561@1,COG0561@2 NA|NA|NA S hydrolase HOOMBAJD_00112 568703.LGG_02632 1.2e-58 232.3 Lactobacillaceae Bacteria 1U708@1239,29PSZ@1,30AR5@2,3F8T2@33958,4IGUJ@91061 NA|NA|NA HOOMBAJD_00113 314315.LCA_0323 4.8e-12 77.0 Lactobacillaceae Bacteria 1U6CF@1239,2DKPT@1,30A91@2,3F7KP@33958,4IG44@91061 NA|NA|NA HOOMBAJD_00114 568703.LGG_02634 3.6e-115 421.0 Lactobacillaceae yoaK Bacteria 1V1VQ@1239,3F5F5@33958,4HM4F@91061,COG3619@1,COG3619@2 NA|NA|NA S Protein of unknown function (DUF1275) HOOMBAJD_00115 568703.LGG_02635 2.4e-127 461.5 Lactobacillaceae yjhF Bacteria 1VDCB@1239,3FC5R@33958,4HJ9X@91061,COG0406@1,COG0406@2 NA|NA|NA G Phosphoglycerate mutase family HOOMBAJD_00116 568703.LGG_02636 8.1e-151 539.7 Lactobacillaceae yitU 3.1.3.104 ko:K21064 ko00740,ko01100,ko01110,map00740,map01100,map01110 M00125 R07280 RC00017 ko00000,ko00001,ko00002,ko01000 Bacteria 1TREF@1239,3F47B@33958,4H9Y9@91061,COG0561@1,COG0561@2 NA|NA|NA S hydrolase HOOMBAJD_00117 568703.LGG_02637 3.6e-90 337.4 Lactobacillaceae rnhA GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 ko:K03469 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 Bacteria 1V4A0@1239,3F3RG@33958,4HHJ9@91061,COG0328@1,COG0328@2 NA|NA|NA L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids HOOMBAJD_00118 568703.LGG_02638 5.8e-166 590.1 Lactobacillaceae Bacteria 1TP9T@1239,3F4HW@33958,4HCXX@91061,COG0583@1,COG0583@2 NA|NA|NA K LysR substrate binding domain HOOMBAJD_00119 568703.LGG_02639 1.3e-226 792.0 Lactobacillaceae Bacteria 1TPS5@1239,3F4AH@33958,4H9M3@91061,COG1167@1,COG1167@2 NA|NA|NA EK Aminotransferase, class I HOOMBAJD_00121 568703.LGG_02641 2.9e-45 187.6 Lactobacillaceae Bacteria 1U7X9@1239,2BNCG@1,32H06@2,3FAAB@33958,4IHUN@91061 NA|NA|NA HOOMBAJD_00122 568703.LGG_02642 9.4e-58 229.2 Lactobacillaceae Bacteria 1VFF0@1239,2E9Y3@1,3343R@2,3F8BC@33958,4HPUY@91061 NA|NA|NA HOOMBAJD_00123 568703.LGG_02643 5.6e-193 680.2 Lactobacillaceae recA GO:0000150,GO:0000166,GO:0000287,GO:0000725,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008094,GO:0008144,GO:0008150,GO:0008152,GO:0009314,GO:0009411,GO:0009416,GO:0009432,GO:0009605,GO:0009628,GO:0009650,GO:0009987,GO:0009991,GO:0016462,GO:0016787,GO:0016788,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0030145,GO:0030554,GO:0031668,GO:0032553,GO:0032555,GO:0032559,GO:0033554,GO:0034641,GO:0035639,GO:0036094,GO:0042148,GO:0042221,GO:0042623,GO:0043142,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046677,GO:0046872,GO:0046914,GO:0050896,GO:0051716,GO:0071496,GO:0071704,GO:0090304,GO:0090305,GO:0097159,GO:0097367,GO:0140097,GO:1901265,GO:1901360,GO:1901363 ko:K03553 ko03440,map03440 M00729 ko00000,ko00001,ko00002,ko03400 Bacteria 1TPD5@1239,3F3KU@33958,4HAG5@91061,COG0468@1,COG0468@2 NA|NA|NA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage HOOMBAJD_00124 568703.LGG_02644 7.3e-116 423.3 Lactobacillaceae ydfK ko:K07150 ko00000 Bacteria 1UH19@1239,3FB62@33958,4HB4E@91061,COG1811@1,COG1811@2 NA|NA|NA S Protein of unknown function (DUF554) HOOMBAJD_00125 568703.LGG_02645 2.2e-87 328.2 Lactobacillaceae Bacteria 1U76S@1239,29P3K@1,30AWC@2,3F91T@33958,4IH1K@91061 NA|NA|NA HOOMBAJD_00127 568703.LGG_02647 0.0 1241.9 Lactobacillaceae fruA 2.7.1.194,2.7.1.200,2.7.1.202 ko:K02768,ko:K02769,ko:K02770,ko:K02773,ko:K02806,ko:K02821,ko:K03491 ko00051,ko00052,ko00053,ko01100,ko01120,ko02060,map00051,map00052,map00053,map01100,map01120,map02060 M00273,M00279,M00283,M00550 R03232,R05570,R07671 RC00017,RC03206 ko00000,ko00001,ko00002,ko01000,ko02000,ko03000 4.A.2.1,4.A.5.1,4.A.7.1 Bacteria 1TPKU@1239,3F5D3@33958,4H9KR@91061,COG1299@1,COG1299@2,COG1445@1,COG1445@2,COG1762@1,COG1762@2 NA|NA|NA GT Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HOOMBAJD_00128 568703.LGG_02648 1.3e-168 599.0 Lactobacillaceae pfkB 2.7.1.11,2.7.1.144,2.7.1.56 ko:K00882,ko:K00917,ko:K16370 ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130,map01200,map01230 M00001,M00345 R00756,R02071,R03236,R03237,R03238,R03239,R04779 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 Bacteria 1TTI9@1239,3F537@33958,4HCRN@91061,COG1105@1,COG1105@2 NA|NA|NA H pfkB family carbohydrate kinase HOOMBAJD_00129 568703.LGG_02649 2.5e-130 471.5 Lactobacillaceae rpl Bacteria 1TP26@1239,3F681@33958,4HDKG@91061,COG1737@1,COG1737@2 NA|NA|NA K Helix-turn-helix domain, rpiR family HOOMBAJD_00130 568703.LGG_02650 2.8e-298 1030.4 Lactobacillaceae glpK GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 ko:K00864 ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626 R00847 RC00002,RC00017 ko00000,ko00001,ko01000,ko04147 Bacteria 1TPX3@1239,3F3WI@33958,4H9ZF@91061,COG0554@1,COG0554@2 NA|NA|NA F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate HOOMBAJD_00131 1122149.BACN01000117_gene8 1.3e-133 483.0 Lactobacillaceae Bacteria 1TQ5G@1239,3FBCX@33958,4IPIE@91061,COG3547@1,COG3547@2 NA|NA|NA L Transposase, IS116 IS110 IS902 family HOOMBAJD_00132 568703.LGG_02656 5.7e-288 996.1 Lactobacillaceae ubiD 4.1.1.98 ko:K03182 ko00130,ko01100,ko01110,map00130,map01100,map01110 M00117 R04985,R04986 RC00391 ko00000,ko00001,ko00002,ko01000 Bacteria 1TQ6V@1239,3F50J@33958,4HM1D@91061,COG0043@1,COG0043@2 NA|NA|NA H 3-octaprenyl-4-hydroxybenzoate carboxy-lyase HOOMBAJD_00133 568703.LGG_02657 3.2e-101 374.4 Lactobacillaceae ubiX GO:0003674,GO:0003824,GO:0006732,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0044237,GO:0044249,GO:0051186,GO:0051188 2.5.1.129 ko:K03186 ko00130,ko00627,ko00940,ko01100,ko01110,ko01120,ko01220,map00130,map00627,map00940,map01100,map01110,map01120,map01220 M00117 R01238,R02952,R03367,R04985,R04986,R11225 RC00391,RC00814,RC03392 ko00000,ko00001,ko00002,ko01000 Bacteria 1V3JV@1239,3F5PD@33958,4HFZX@91061,COG0163@1,COG0163@2 NA|NA|NA H Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN HOOMBAJD_00134 568703.LGG_02658 5.6e-245 853.2 Lactobacillaceae Bacteria 1V093@1239,3F3VN@33958,4HQP0@91061,COG0471@1,COG0471@2 NA|NA|NA P Sodium:sulfate symporter transmembrane region HOOMBAJD_00135 568703.LGG_02659 5.8e-158 563.5 Lactobacillaceae ko:K09681 ko00000,ko03000 Bacteria 1TQ6Y@1239,3F4CY@33958,4HWQQ@91061,COG0583@1,COG0583@2 NA|NA|NA K LysR substrate binding domain HOOMBAJD_00136 568703.LGG_02660 1.3e-75 288.9 Lactobacillaceae Bacteria 1VX0V@1239,2F603@1,33YIJ@2,3F6YU@33958,4HXF9@91061 NA|NA|NA HOOMBAJD_00137 568703.LGG_02661 9e-72 276.2 Lactobacillaceae Bacteria 1VMZX@1239,3F82U@33958,4HMTC@91061,COG1846@1,COG1846@2 NA|NA|NA K Transcriptional regulator HOOMBAJD_00138 568703.LGG_02662 1.5e-245 855.1 Lactobacillaceae ypiB ko:K18926 M00715 ko00000,ko00002,ko02000 2.A.1.3.30 Bacteria 1TPRN@1239,3FCCM@33958,4H9VV@91061,COG0477@1,COG2814@2 NA|NA|NA EGP Major facilitator Superfamily HOOMBAJD_00139 543734.LCABL_28390 7.8e-129 466.5 Lactobacillaceae araD 4.1.2.17,5.1.3.4 ko:K01628,ko:K03077 ko00040,ko00051,ko00053,ko01100,ko01120,map00040,map00051,map00053,map01100,map01120 M00550 R02262,R05850 RC00603,RC00604,RC01479 ko00000,ko00001,ko00002,ko01000 Bacteria 1V57Z@1239,3FCAV@33958,4HGYY@91061,COG0235@1,COG0235@2 NA|NA|NA G Class II Aldolase and Adducin N-terminal domain HOOMBAJD_00141 543734.LCABL_28410 4.3e-241 840.5 Lactobacillaceae pts36C ko:K02775,ko:K20114 ko00052,ko01100,ko02060,map00052,map01100,map02060 M00279,M00807 R05570,R11171 RC00017,RC03206 ko00000,ko00001,ko00002,ko02000 4.A.5,4.A.5.1 Bacteria 1TQ10@1239,3FCCE@33958,4HAIT@91061,COG3775@1,COG3775@2 NA|NA|NA G PTS system sugar-specific permease component HOOMBAJD_00142 1423732.BALS01000032_gene209 1.1e-50 205.7 Lactobacillaceae sgcB 2.7.1.200 ko:K02774 ko00052,ko01100,ko02060,map00052,map01100,map02060 M00279 R05570 RC00017,RC03206 ko00000,ko00001,ko00002,ko01000,ko02000 4.A.5.1 Bacteria 1VAU7@1239,3F7JF@33958,4IR9X@91061,COG3414@1,COG3414@2 NA|NA|NA G PTS system, Lactose/Cellobiose specific IIB subunit HOOMBAJD_00143 543734.LCABL_28430 3e-68 264.6 Lactobacillaceae pts36A 2.7.1.194,2.7.1.200,2.7.1.202,2.7.1.204 ko:K02768,ko:K02769,ko:K02770,ko:K02773,ko:K02806,ko:K02821,ko:K03491,ko:K11201,ko:K20112 ko00051,ko00052,ko00053,ko01100,ko01120,ko02060,map00051,map00052,map00053,map01100,map01120,map02060 M00273,M00279,M00283,M00306,M00550,M00807 R03232,R05570,R07671,R11171 RC00017,RC03206 ko00000,ko00001,ko00002,ko01000,ko02000,ko03000 4.A.2.1,4.A.5,4.A.5.1,4.A.7.1 Bacteria 1VAHC@1239,3F7U5@33958,4HPPC@91061,COG1762@1,COG1762@2 NA|NA|NA G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HOOMBAJD_00144 1423732.BALS01000067_gene2173 1.2e-119 436.0 Lactobacillaceae ko:K02444 ko00000,ko03000 Bacteria 1V1VH@1239,3FC5U@33958,4HG12@91061,COG1349@1,COG1349@2 NA|NA|NA K DeoR C terminal sensor domain HOOMBAJD_00146 1423732.BALS01000067_gene2174 4.4e-166 590.5 Lactobacillaceae rhaD GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0008150,GO:0008152,GO:0009056,GO:0016052,GO:0016829,GO:0016830,GO:0016832,GO:0019321,GO:0019323,GO:0044238,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046365,GO:0071704,GO:1901575 4.1.2.17,4.1.2.19 ko:K01628,ko:K01629 ko00040,ko00051,ko01120,map00040,map00051,map01120 R01785,R02262,R02263 RC00438,RC00599,RC00603,RC00604 ko00000,ko00001,ko01000 Bacteria 1TRMG@1239,3F4WZ@33958,4H9QT@91061,COG0235@1,COG0235@2 NA|NA|NA H Catalyzes the reversible cleavage of L-rhamnulose-1- phosphate to dihydroxyacetone phosphate (DHAP) and L-lactaldehyde HOOMBAJD_00147 568703.LGG_02688 1.4e-258 898.3 Lactobacillaceae rhaA GO:0003674,GO:0003824,GO:0005975,GO:0005996,GO:0008150,GO:0008152,GO:0008740,GO:0009056,GO:0016052,GO:0016853,GO:0016860,GO:0016861,GO:0019299,GO:0019301,GO:0019318,GO:0019320,GO:0019321,GO:0019324,GO:0044238,GO:0044281,GO:0044282,GO:0046365,GO:0071704,GO:1901575 2.7.1.5,5.3.1.14 ko:K00848,ko:K01813 ko00040,ko00051,ko01120,map00040,map00051,map01120 R01902,R02437,R03014 RC00002,RC00017,RC00434 ko00000,ko00001,ko01000 Bacteria 1TS42@1239,3F5GK@33958,4HBQP@91061,COG4806@1,COG4806@2 NA|NA|NA G L-rhamnose isomerase (RhaA) HOOMBAJD_00148 568703.LGG_02689 3.8e-56 223.8 Lactobacillaceae rhaM GO:0003674,GO:0003824,GO:0005975,GO:0005996,GO:0008150,GO:0008152,GO:0009056,GO:0016052,GO:0016853,GO:0016854,GO:0016857,GO:0019299,GO:0019301,GO:0019318,GO:0019320,GO:0044238,GO:0044281,GO:0044282,GO:0046365,GO:0071704,GO:1901575 5.1.3.32 ko:K03534 R10819 RC00563 ko00000,ko01000 Bacteria 1VA1C@1239,3F70M@33958,4HM5P@91061,COG3254@1,COG3254@2 NA|NA|NA G Involved in the anomeric conversion of L-rhamnose HOOMBAJD_00149 568703.LGG_02690 4.5e-285 986.5 Lactobacillaceae rhaB GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005975,GO:0005996,GO:0006793,GO:0006796,GO:0008144,GO:0008150,GO:0008152,GO:0008993,GO:0009056,GO:0009987,GO:0016052,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017076,GO:0019200,GO:0019299,GO:0019301,GO:0019318,GO:0019320,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0044282,GO:0046365,GO:0046835,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1901575 2.7.1.12,2.7.1.17,2.7.1.5,5.3.1.14 ko:K00848,ko:K00851,ko:K00854,ko:K01813 ko00030,ko00040,ko00051,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00040,map00051,map01100,map01110,map01120,map01130,map01200 M00014 R01639,R01737,R01902,R02437,R03014 RC00002,RC00017,RC00434,RC00538 ko00000,ko00001,ko00002,ko01000 iEcE24377_1341.EcE24377A_4435 Bacteria 1TP7Z@1239,3F3UM@33958,4HB5X@91061,COG1070@1,COG1070@2 NA|NA|NA F Involved in the catabolism of L-rhamnose (6-deoxy-L- mannose). Catalyzes the transfer of the gamma-phosphate group from ATP to the 1-hydroxyl group of L-rhamnulose to yield L-rhamnulose 1-phosphate HOOMBAJD_00150 568703.LGG_02691 8.8e-227 792.7 Lactobacillaceae iolF ko:K06610 ko00000,ko02000 2.A.1.1.27 Bacteria 1TRBM@1239,3F5E4@33958,4HE7W@91061,COG0477@1,COG2814@2 NA|NA|NA EGP Major facilitator Superfamily HOOMBAJD_00151 568703.LGG_02692 4.1e-192 677.2 Lactobacillaceae rhaR Bacteria 1TS6T@1239,3FBGG@33958,4IQ7R@91061,COG0662@1,COG0662@2,COG2207@1,COG2207@2 NA|NA|NA K helix_turn_helix, arabinose operon control protein HOOMBAJD_00152 568703.LGG_02693 6.4e-215 753.1 Lactobacillaceae adhC 1.1.1.90 ko:K00055,ko:K06898 ko00350,ko00360,ko00622,ko00623,ko01100,ko01120,ko01220,map00350,map00360,map00622,map00623,map01100,map01120,map01220 M00537,M00538 R01763,R02611,R04304,R05282,R05347,R05348 RC00087,RC00116 ko00000,ko00001,ko00002,ko01000 Bacteria 1TP8E@1239,3F3QP@33958,4HAH9@91061,COG1062@1,COG1062@2 NA|NA|NA C Zn-dependent alcohol dehydrogenases, class III HOOMBAJD_00153 568703.LGG_02694 1.4e-65 255.4 Lactobacillaceae Bacteria 1W5K5@1239,28ZBI@1,2ZM3D@2,3F825@33958,4I1Q6@91061 NA|NA|NA S Protein of unknown function (DUF1093) HOOMBAJD_00154 568703.LGG_02695 1.3e-120 439.1 Lactobacillaceae Bacteria 1W53D@1239,2EM6V@1,2ZWQA@2,3FB3R@33958,4I25H@91061 NA|NA|NA HOOMBAJD_00155 568703.LGG_02696 0.0 1151.3 Lactobacillaceae 3.2.1.10 ko:K01182 ko00052,ko00500,ko01100,map00052,map00500,map01100 R00801,R01718,R01791,R06199 RC00028,RC00059,RC00077,RC00451 ko00000,ko00001,ko01000 GH13 Bacteria 1TP53@1239,3F41I@33958,4HA1G@91061,COG0366@1,COG0366@2 NA|NA|NA G Alpha amylase, catalytic domain protein HOOMBAJD_00156 1423816.BACQ01000033_gene1421 4.6e-305 1053.5 Lactobacillaceae plyA3 ko:K12547 ko00000 Bacteria 1TRWY@1239,3FA55@33958,4ITNJ@91061,COG5434@1,COG5434@2 NA|NA|NA M Right handed beta helix region HOOMBAJD_00157 1423816.BACQ01000033_gene1420 2.9e-81 308.9 Bacilli Bacteria 1V374@1239,2E4QH@1,32ZJ3@2,4I0YF@91061 NA|NA|NA HOOMBAJD_00158 543734.LCABL_28520 1.2e-269 935.6 Bacilli Bacteria 1UHQG@1239,4ISXY@91061,COG5434@1,COG5434@2 NA|NA|NA M Heparinase II/III N-terminus HOOMBAJD_00160 1423816.BACQ01000033_gene1417 3.5e-66 257.7 Firmicutes ko:K02744 ko00052,ko02060,map00052,map02060 M00277,M00287 R08366,R08367 RC00017,RC03206 ko00000,ko00001,ko00002,ko01000,ko02000 4.A.6.1.4,4.A.6.1.5 Bacteria 1W0I6@1239,COG2893@1,COG2893@2 NA|NA|NA G PTS system fructose IIA component HOOMBAJD_00161 1423816.BACQ01000033_gene1416 3.6e-143 514.2 Lactobacillaceae agaD ko:K02747,ko:K02796 ko00051,ko00052,ko00520,ko01100,ko02060,map00051,map00052,map00520,map01100,map02060 M00276,M00277 R02630,R08366 RC00017,RC03206 ko00000,ko00001,ko00002,ko02000 4.A.6.1,4.A.6.1.4 Bacteria 1TSQF@1239,3F66Y@33958,4HEP4@91061,COG3716@1,COG3716@2 NA|NA|NA G PTS system mannose/fructose/sorbose family IID component HOOMBAJD_00162 543734.LCABL_28560 6.4e-132 476.9 Lactobacillaceae ko:K02746 ko00052,ko02060,map00052,map02060 M00277 R08366 RC00017 ko00000,ko00001,ko00002,ko02000 4.A.6.1.4 Bacteria 1TRMS@1239,3FC9G@33958,4HDP2@91061,COG3715@1,COG3715@2 NA|NA|NA G PTS system sorbose-specific iic component HOOMBAJD_00163 1423816.BACQ01000033_gene1414 3.5e-80 304.3 Lactobacillaceae agaV 2.7.1.191 ko:K02745,ko:K02794 ko00051,ko00052,ko00520,ko01100,ko02060,map00051,map00052,map00520,map01100,map02060 M00276,M00277 R02630,R08366 RC00017,RC03206 ko00000,ko00001,ko00002,ko01000,ko02000 4.A.6.1,4.A.6.1.4 Bacteria 1V20H@1239,3FC7T@33958,4HGNG@91061,COG3444@1,COG3444@2 NA|NA|NA G PTS system sorbose subfamily IIB component HOOMBAJD_00164 1423732.BALS01000067_gene2180 1.8e-204 719.2 Lactobacillaceae ugl GO:0000272,GO:0003674,GO:0003824,GO:0004553,GO:0005975,GO:0005976,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009405,GO:0015929,GO:0016052,GO:0016787,GO:0016798,GO:0033931,GO:0043170,GO:0044238,GO:0044419,GO:0051704,GO:0052757,GO:0071704,GO:1901575 3.2.1.180 ko:K18581 R10867 RC00049,RC02427 ko00000,ko01000 GH88 Bacteria 1TR4A@1239,3F5YB@33958,4HCM9@91061,COG4225@1,COG4225@2 NA|NA|NA S Glycosyl Hydrolase Family 88 HOOMBAJD_00165 543734.LCABL_28600 1.9e-109 402.1 Lactobacillaceae Bacteria 1V8YE@1239,3F4Y3@33958,4HIR8@91061,COG1414@1,COG1414@2 NA|NA|NA K Bacterial transcriptional regulator HOOMBAJD_00166 1423732.BALS01000067_gene2184 1.7e-143 515.4 Lactobacillaceae kduI GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005975,GO:0005996,GO:0006063,GO:0006064,GO:0006082,GO:0008150,GO:0008152,GO:0008697,GO:0009056,GO:0009987,GO:0016052,GO:0016054,GO:0016853,GO:0016860,GO:0016861,GO:0019585,GO:0019586,GO:0019698,GO:0019752,GO:0032787,GO:0042802,GO:0042839,GO:0042840,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0046365,GO:0046395,GO:0046396,GO:0046397,GO:0046872,GO:0071704,GO:0072329,GO:1901575 5.3.1.17 ko:K01815 ko00040,map00040 R04383 RC00541 ko00000,ko00001,ko01000 Bacteria 1TP4X@1239,3F4U4@33958,4HBJH@91061,COG3717@1,COG3717@2 NA|NA|NA G Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate HOOMBAJD_00167 543734.LCABL_28620 1e-137 496.1 Lactobacillaceae Bacteria 1TPZ8@1239,3F4N6@33958,4HAMW@91061,COG1028@1,COG1028@2 NA|NA|NA IQ Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) HOOMBAJD_00168 543734.LCABL_28630 2.3e-87 328.6 Lactobacillaceae eda 4.1.2.14,4.1.3.42 ko:K01625 ko00030,ko00630,ko01100,ko01120,ko01200,map00030,map00630,map01100,map01120,map01200 M00008,M00061,M00308,M00631 R00470,R05605 RC00307,RC00308,RC00435 ko00000,ko00001,ko00002,ko01000 Bacteria 1TS0F@1239,3F6AY@33958,4HG4G@91061,COG0800@1,COG0800@2 NA|NA|NA G KDPG and KHG aldolase HOOMBAJD_00169 543734.LCABL_28640 1.8e-152 545.4 Lactobacillaceae kdgK 2.7.1.45 ko:K00874 ko00030,ko01100,ko01120,ko01200,map00030,map01100,map01120,map01200 M00061,M00308,M00631 R01541 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 Bacteria 1TRRY@1239,3FC26@33958,4HT5E@91061,COG0524@1,COG0524@2 NA|NA|NA G pfkB family carbohydrate kinase HOOMBAJD_00170 568703.LGG_02699 8.7e-122 443.0 Lactobacillaceae rpiA GO:0003674,GO:0003824,GO:0004751,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006014,GO:0006081,GO:0006098,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009052,GO:0009117,GO:0009987,GO:0016853,GO:0016860,GO:0016861,GO:0019321,GO:0019362,GO:0019637,GO:0019682,GO:0019693,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046496,GO:0051156,GO:0051186,GO:0055086,GO:0071704,GO:0072524,GO:1901135,GO:1901360,GO:1901564 2.7.1.12,5.3.1.6 ko:K00851,ko:K01807 ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230 M00004,M00007,M00165,M00167,M00580 R01056,R01737 RC00002,RC00017,RC00434 ko00000,ko00001,ko00002,ko01000 Bacteria 1V1DB@1239,3F43N@33958,4HFQ7@91061,COG0120@1,COG0120@2 NA|NA|NA G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate HOOMBAJD_00171 1423816.BACQ01000033_gene1403 0.0 1312.7 Lactobacillaceae CP_0954 4.2.2.1 ko:K01727 ko00000,ko01000 PL8 Bacteria 1TQ2K@1239,3F9RZ@33958,4HBG8@91061,COG1196@1,COG1196@2,COG5492@1,COG5492@2 NA|NA|NA N Polysaccharide lyase family 8, N terminal alpha-helical domain HOOMBAJD_00172 1231336.L248_3009 8.7e-205 720.3 Lactobacillaceae rafA 3.2.1.22 ko:K07407 ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603 R01101,R01103,R01104,R01194,R01329,R02926,R03634,R04019,R04470,R05549,R05961,R06091 RC00049,RC00059,RC00451 ko00000,ko00001,ko01000 Bacteria 1TSZB@1239,3F5UE@33958,4HDHK@91061,COG3345@1,COG3345@2 NA|NA|NA G Melibiase HOOMBAJD_00173 457396.CSBG_03067 2.7e-40 171.8 Clostridiaceae 2.7.1.191 ko:K02794 ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060 M00276 R02630 RC00017,RC03206 ko00000,ko00001,ko00002,ko01000,ko02000 4.A.6.1 Bacteria 1V46G@1239,24I8X@186801,36J3A@31979,COG3444@1,COG3444@2 NA|NA|NA G PTS system sorbose subfamily IIB component HOOMBAJD_00174 457396.CSBG_03066 3.1e-65 255.4 Clostridiaceae ko:K02796 ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060 M00276 R02630 RC00017,RC03206 ko00000,ko00001,ko00002,ko02000 4.A.6.1 Bacteria 1UZYR@1239,25C3F@186801,36WNW@31979,COG3716@1,COG3716@2 NA|NA|NA G PTS system mannose/fructose/sorbose family IID component HOOMBAJD_00175 1158607.UAU_02705 4.4e-64 251.5 Enterococcaceae ko:K02795 ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060 M00276 R02630 RC00017,RC03206 ko00000,ko00001,ko00002,ko02000 4.A.6.1 Bacteria 1UYP8@1239,4B1R8@81852,4HU18@91061,COG3715@1,COG3715@2 NA|NA|NA G PTS system sorbose-specific iic component HOOMBAJD_00176 1158607.UAU_02706 2.7e-22 111.7 Bacteria 2.7.1.191 ko:K02793 ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060 M00276 R02630 RC00017,RC03206 ko00000,ko00001,ko00002,ko01000,ko02000 4.A.6.1 Bacteria COG2893@1,COG2893@2 NA|NA|NA G phosphoenolpyruvate-dependent sugar phosphotransferase system HOOMBAJD_00177 1114972.AUAW01000010_gene947 4.6e-53 215.3 Lactobacillaceae araR ko:K02103 ko00000,ko03000 Bacteria 1TP9Q@1239,3F3ZM@33958,4HARD@91061,COG1609@1,COG1609@2 NA|NA|NA K Transcriptional regulator HOOMBAJD_00178 568703.LGG_02701 7.8e-271 939.1 Lactobacillaceae 3.2.1.122,3.2.1.86 ko:K01222,ko:K01232 ko00010,ko00500,map00010,map00500 R00837,R00838,R00839,R05133,R05134,R06113 RC00049,RC00171,RC00714 ko00000,ko00001,ko01000 GH4,GT4 Bacteria 1TQ9I@1239,3F4W5@33958,4H9TM@91061,COG1486@1,COG1486@2 NA|NA|NA G Family 4 glycosyl hydrolase C-terminal domain HOOMBAJD_00179 568703.LGG_02702 3.6e-296 1023.5 Lactobacillaceae 2.7.1.199,2.7.1.208,2.7.1.211 ko:K02755,ko:K02756,ko:K02757,ko:K02790,ko:K02791,ko:K02808,ko:K02809,ko:K02810 ko00010,ko00500,ko00520,ko02060,map00010,map00500,map00520,map02060 M00266,M00269,M00271 R00811,R02738,R04111 RC00017,RC03206 ko00000,ko00001,ko00002,ko01000,ko02000 4.A.1.1.3,4.A.1.2.1,4.A.1.2.10,4.A.1.2.11,4.A.1.2.12,4.A.1.2.2,4.A.1.2.5,4.A.1.2.6,4.A.1.2.9 Bacteria 1TPJ8@1239,3F44V@33958,4HA8X@91061,COG1263@1,COG1263@2,COG1264@1,COG1264@2 NA|NA|NA G phosphotransferase system, EIIB HOOMBAJD_00180 543734.LCABL_00570 8.3e-208 729.9 Lactobacillaceae ko:K06147,ko:K06148 ko00000,ko02000 3.A.1,3.A.1.106,3.A.1.109,3.A.1.21 Bacteria 1TSRV@1239,3F46B@33958,4HCIZ@91061,COG1132@1,COG1132@2 NA|NA|NA V ABC-type multidrug transport system, ATPase and permease components HOOMBAJD_00181 543734.LCABL_00560 6.9e-108 397.1 Lactobacillaceae Bacteria 1UZI0@1239,3F837@33958,4I40C@91061,COG1396@1,COG1396@2 NA|NA|NA K Transcriptional activator, Rgg GadR MutR family HOOMBAJD_00182 568703.LGG_02704 7e-125 453.4 Lactobacillaceae Bacteria 1TR75@1239,3F6Y6@33958,4HJU7@91061,COG1737@1,COG1737@2 NA|NA|NA K Helix-turn-helix domain, rpiR family HOOMBAJD_00183 568703.LGG_02705 5.2e-60 236.9 Lactobacillaceae pts23A ko:K02777 ko00010,ko00500,ko00520,ko02026,ko02060,ko05111,map00010,map00500,map00520,map02026,map02060,map05111 M00265,M00266,M00268,M00270,M00272,M00303,M00806 R02738,R02780,R04111,R04394,R05132,R08559 RC00017,RC03206 ko00000,ko00001,ko00002,ko01000,ko02000 4.A.1.1.1 Bacteria 1VAEB@1239,3FC0X@33958,4HIPR@91061,COG2190@1,COG2190@2 NA|NA|NA G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HOOMBAJD_00184 568703.LGG_02705 1.1e-10 71.2 Lactobacillaceae pts23A ko:K02777 ko00010,ko00500,ko00520,ko02026,ko02060,ko05111,map00010,map00500,map00520,map02026,map02060,map05111 M00265,M00266,M00268,M00270,M00272,M00303,M00806 R02738,R02780,R04111,R04394,R05132,R08559 RC00017,RC03206 ko00000,ko00001,ko00002,ko01000,ko02000 4.A.1.1.1 Bacteria 1VAEB@1239,3FC0X@33958,4HIPR@91061,COG2190@1,COG2190@2 NA|NA|NA G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 HOOMBAJD_00186 568703.LGG_02707 3.7e-137 494.2 Lactobacillaceae 4.1.2.14 ko:K17463 ko00030,ko01100,ko01120,map00030,map01100,map01120 M00061,M00631 R05605 RC00307,RC00435 ko00000,ko00001,ko00002,ko01000 Bacteria 1TQX7@1239,2DBAP@1,2Z844@2,3F5QS@33958,4HABQ@91061 NA|NA|NA S KDGP aldolase HOOMBAJD_00187 568703.LGG_02708 1.2e-202 712.2 Lactobacillaceae selA 2.9.1.1 ko:K01042 ko00450,ko00970,map00450,map00970 R08219 RC01246 ko00000,ko00001,ko01000 Bacteria 1TQT8@1239,3F4MN@33958,4HC3U@91061,COG1921@1,COG1921@2 NA|NA|NA H L-seryl-tRNA selenium transferase HOOMBAJD_00188 568703.LGG_02709 2.2e-215 754.6 Lactobacillaceae dho 3.5.2.3 ko:K01465 ko00240,ko01100,map00240,map01100 M00051 R01993 RC00632 ko00000,ko00001,ko00002,ko01000 Bacteria 1TPXM@1239,3F4S7@33958,4HBNV@91061,COG3964@1,COG3964@2 NA|NA|NA S Amidohydrolase family HOOMBAJD_00189 568703.LGG_02710 1e-106 392.9 Lactobacillaceae Bacteria 1TRJJ@1239,2CHGF@1,2Z7QV@2,3F5QZ@33958,4HC0E@91061 NA|NA|NA S Domain of unknown function (DUF4310) HOOMBAJD_00190 568703.LGG_02711 1.7e-137 495.4 Lactobacillaceae Bacteria 1TQ2N@1239,28HBR@1,2Z7NQ@2,3F5N2@33958,4HAZ6@91061 NA|NA|NA S Domain of unknown function (DUF4311) HOOMBAJD_00191 568703.LGG_02712 1.7e-52 211.8 Lactobacillaceae Bacteria 1VQQN@1239,2AJY2@1,31AM7@2,3F93K@33958,4IRVB@91061 NA|NA|NA S Domain of unknown function (DUF4312) HOOMBAJD_00192 1423816.BACQ01000033_gene1388 1.2e-61 242.3 Lactobacillaceae Bacteria 1V7VZ@1239,292C3@1,2ZPWH@2,3F6XI@33958,4HIX7@91061 NA|NA|NA S Glycine-rich SFCGS HOOMBAJD_00193 568703.LGG_02714 1.5e-53 215.3 Lactobacillaceae Bacteria 1VI2Z@1239,2CG0N@1,32S2X@2,3F8H0@33958,4HQX6@91061 NA|NA|NA S PRD domain HOOMBAJD_00194 568703.LGG_02715 0.0 1199.5 Lactobacillaceae Bacteria 1U0UU@1239,3F5NV@33958,4HJZ1@91061,COG3711@1,COG3711@2 NA|NA|NA K Mga helix-turn-helix domain HOOMBAJD_00195 568703.LGG_02716 2.9e-122 444.5 Lactobacillaceae tal 2.2.1.2 ko:K00616 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map01100,map01110,map01120,map01130,map01200,map01230 M00004,M00007 R01827 RC00439,RC00604 ko00000,ko00001,ko00002,ko01000 Bacteria 1V4IX@1239,3FCEA@33958,4HJYI@91061,COG0176@1,COG0176@2 NA|NA|NA H Pfam:Transaldolase HOOMBAJD_00196 568703.LGG_02717 3.9e-63 247.3 Lactobacillaceae srlB GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0006810,GO:0008150,GO:0008152,GO:0008643,GO:0009401,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237,GO:0051179,GO:0051234,GO:0071702 2.7.1.198 ko:K02781 ko00051,ko02060,map00051,map02060 M00280 R05820 RC00017,RC03206 ko00000,ko00001,ko00002,ko01000,ko02000 4.A.4.1 iB21_1397.B21_02519,iEC55989_1330.EC55989_2966,iECBD_1354.ECBD_1021,iECB_1328.ECB_02554,iECD_1391.ECD_02554,iECIAI39_1322.ECIAI39_2890,iECO111_1330.ECO111_3422,iECO26_1355.ECO26_3767,iECSE_1348.ECSE_2952,iECSP_1301.ECSP_3652,iECW_1372.ECW_m2903,iECs_1301.ECs3560,iEKO11_1354.EKO11_1071,iEcE24377_1341.EcE24377A_2988,iEcHS_1320.EcHS_A2840,iEcolC_1368.EcolC_1008,iG2583_1286.G2583_3352,iSSON_1240.SSON_2848,iWFL_1372.ECW_m2903,iZ_1308.Z4011 Bacteria 1VG8V@1239,3F7KY@33958,4HPTF@91061,COG3731@1,COG3731@2 NA|NA|NA G PTS system glucitol/sorbitol-specific IIA component HOOMBAJD_00197 568703.LGG_02718 1.6e-194 685.3 Lactobacillaceae srlE GO:0003674,GO:0003824,GO:0005215,GO:0006810,GO:0008150,GO:0008643,GO:0009401,GO:0015144,GO:0016740,GO:0016772,GO:0016773,GO:0022804,GO:0022857,GO:0034219,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0090563 2.7.1.198 ko:K02782,ko:K02783 ko00051,ko02060,map00051,map02060 M00280 R05820 RC00017,RC03206 ko00000,ko00001,ko00002,ko01000,ko02000 4.A.4.1 Bacteria 1TQ8F@1239,3F5AP@33958,4HA7E@91061,COG3732@1,COG3732@2 NA|NA|NA G Sorbitol phosphotransferase enzyme II N-terminus HOOMBAJD_00198 568703.LGG_02719 2.2e-102 378.3 Lactobacillaceae srlA GO:0006810,GO:0008150,GO:0008643,GO:0009401,GO:0051179,GO:0051234,GO:0071702 ko:K02783 ko00051,ko02060,map00051,map02060 M00280 R05820 RC00017,RC03206 ko00000,ko00001,ko00002,ko02000 4.A.4.1 iSBO_1134.SBO_2816 Bacteria 1URER@1239,3F445@33958,4HEHX@91061,COG3730@1,COG3730@2 NA|NA|NA G PTS system enzyme II sorbitol-specific factor HOOMBAJD_00199 568703.LGG_02720 1.4e-87 328.9 Lactobacillaceae gutM GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:1903506,GO:2000112,GO:2001141 ko:K02466 ko00000 Bacteria 1VHYU@1239,3F7F5@33958,4HP9S@91061,COG4578@1,COG4578@2 NA|NA|NA K Glucitol operon activator protein (GutM) HOOMBAJD_00200 568703.LGG_02721 0.0 1193.7 Lactobacillaceae srlM 2.7.1.194,2.7.1.200,2.7.1.202 ko:K02768,ko:K02769,ko:K02770,ko:K02773,ko:K02806,ko:K02821,ko:K03491 ko00051,ko00052,ko00053,ko01100,ko01120,ko02060,map00051,map00052,map00053,map01100,map01120,map02060 M00273,M00279,M00283,M00550 R03232,R05570,R07671 RC00017,RC03206 ko00000,ko00001,ko00002,ko01000,ko02000,ko03000 4.A.2.1,4.A.5.1,4.A.7.1 Bacteria 1UZ36@1239,3F5E0@33958,4HDUK@91061,COG1762@1,COG1762@2,COG3711@1,COG3711@2 NA|NA|NA GKT Mga helix-turn-helix domain HOOMBAJD_00201 568703.LGG_02722 2.5e-144 518.1 Lactobacillaceae Bacteria 1TP2V@1239,3F4CR@33958,4HCAG@91061,COG1028@1,COG1028@2 NA|NA|NA IQ NAD dependent epimerase/dehydratase family HOOMBAJD_00202 543734.LCABL_03270 2.5e-24 117.9 Lactobacillaceae yefM 2.3.1.15 ko:K08591,ko:K19158,ko:K19159 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 M00089 R00851,R09380 RC00004,RC00039,RC00041 ko00000,ko00001,ko00002,ko01000,ko01004,ko02048 Bacteria 1VAJF@1239,3F7SP@33958,4HPRS@91061,COG2161@1,COG2161@2 NA|NA|NA D Antitoxin component of a toxin-antitoxin (TA) module HOOMBAJD_00203 1334046.AYTB01000002_gene1915 1.5e-29 135.2 Planococcaceae yoeB ko:K19158 ko00000,ko01000,ko02048 Bacteria 1VEN0@1239,26HNW@186818,4HRVW@91061,COG4115@1,COG4115@2 NA|NA|NA S YoeB-like toxin of bacterial type II toxin-antitoxin system HOOMBAJD_00204 568703.LGG_02723 1.6e-137 495.4 Lactobacillaceae araD 4.1.2.17,4.1.2.19,5.1.3.4 ko:K01628,ko:K01629,ko:K03077 ko00040,ko00051,ko00053,ko01100,ko01120,map00040,map00051,map00053,map01100,map01120 M00550 R01785,R02262,R02263,R05850 RC00438,RC00599,RC00603,RC00604,RC01479 ko00000,ko00001,ko00002,ko01000 iHN637.CLJU_RS00590 Bacteria 1TPDV@1239,3F43P@33958,4H9W0@91061,COG0235@1,COG0235@2 NA|NA|NA G links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source HOOMBAJD_00205 568703.LGG_02724 5.3e-150 537.0 Lactobacillaceae XK27_02985 Bacteria 1TR2E@1239,3F4G9@33958,4HCEA@91061,COG0561@1,COG0561@2 NA|NA|NA S Sucrose-6F-phosphate phosphohydrolase HOOMBAJD_00206 568703.LGG_02725 4.2e-164 583.9 Lactobacillaceae ulaE GO:0003674,GO:0003824,GO:0005975,GO:0005996,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016854,GO:0016857,GO:0019321,GO:0019324,GO:0019752,GO:0019852,GO:0034015,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0051186,GO:0071704 5.1.3.22 ko:K03079 ko00040,ko00053,ko01100,ko01120,map00040,map00053,map01100,map01120 M00550 R03244 RC00540 ko00000,ko00001,ko00002,ko01000 iEC55989_1330.EC55989_4754,iECSE_1348.ECSE_4495,iEcHS_1320.EcHS_A4441,iEcSMS35_1347.EcSMS35_4668,iYL1228.KPN_04590 Bacteria 1TSMS@1239,3F5GZ@33958,4HBBU@91061,COG3623@1,COG3623@2 NA|NA|NA G Xylose isomerase-like TIM barrel HOOMBAJD_00207 568703.LGG_02727 4.9e-137 493.8 Lactobacillaceae repA ko:K02444,ko:K03436 ko00000,ko03000 Bacteria 1UYQX@1239,3F6Z8@33958,4HMB5@91061,COG1349@1,COG1349@2 NA|NA|NA K DeoR C terminal sensor domain HOOMBAJD_00208 568703.LGG_02728 1.6e-114 418.7 Lactobacillaceae ulaD GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005975,GO:0005996,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0008150,GO:0008152,GO:0009056,GO:0009109,GO:0009111,GO:0009987,GO:0016052,GO:0016054,GO:0016829,GO:0016830,GO:0016831,GO:0019752,GO:0019852,GO:0019854,GO:0033982,GO:0042365,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0046365,GO:0046395,GO:0046872,GO:0051186,GO:0051187,GO:0071704,GO:1901575 4.1.1.85,4.1.2.43 ko:K03078,ko:K08093 ko00030,ko00040,ko00053,ko00680,ko01100,ko01120,ko01200,ko01230,map00030,map00040,map00053,map00680,map01100,map01120,map01200,map01230 M00345,M00550,M00580 R05338,R07125 RC00421,RC00422,RC01721 ko00000,ko00001,ko00002,ko01000 iAF1260.b4196,iAPECO1_1312.APECO1_2196,iBWG_1329.BWG_3908,iE2348C_1286.E2348C_4519,iECDH10B_1368.ECDH10B_4391,iECDH1ME8569_1439.ECDH1ME8569_4053,iECED1_1282.ECED1_4983,iECIAI1_1343.ECIAI1_4429,iECNA114_1301.ECNA114_4412,iECOK1_1307.ECOK1_4710,iECP_1309.ECP_4441,iECS88_1305.ECS88_4782,iECSE_1348.ECSE_4494,iECSF_1327.ECSF_4082,iEcDH1_1363.EcDH1_3797,iJO1366.b4196,iJR904.b4196,iLF82_1304.LF82_2375,iNRG857_1313.NRG857_21325,iUMN146_1321.UM146_21220,iY75_1357.Y75_RS21850 Bacteria 1TSHP@1239,3F3YT@33958,4HCA8@91061,COG0269@1,COG0269@2 NA|NA|NA G Orotidine 5'-phosphate decarboxylase / HUMPS family HOOMBAJD_00209 568703.LGG_02730 1.4e-44 185.3 Lactobacillaceae sgaB 2.7.1.194,2.7.1.200 ko:K02774,ko:K02822 ko00052,ko00053,ko01100,ko01120,ko02060,map00052,map00053,map01100,map01120,map02060 M00279,M00283,M00550 R05570,R07671 RC00017,RC03206 ko00000,ko00001,ko00002,ko01000,ko02000 4.A.5.1,4.A.7.1 Bacteria 1VHNP@1239,3F78S@33958,4IR7Z@91061,COG3414@1,COG3414@2 NA|NA|NA G PTS system, Lactose/Cellobiose specific IIB subunit HOOMBAJD_00210 568703.LGG_02731 4.5e-280 969.9 Lactobacillaceae ulaA ko:K03475 ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060 M00283,M00550 R07671 RC00017,RC03206 ko00000,ko00001,ko00002,ko02000 4.A.7.1 Bacteria 1TQK5@1239,3FC40@33958,4HB7T@91061,COG3037@1,COG3037@2 NA|NA|NA S PTS system sugar-specific permease component HOOMBAJD_00211 568703.LGG_02732 3.6e-79 300.8 Lactobacillaceae cmtB GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0008643,GO:0009401,GO:0015144,GO:0015711,GO:0015749,GO:0015849,GO:0015882,GO:0016020,GO:0016740,GO:0016772,GO:0016773,GO:0022804,GO:0022857,GO:0034219,GO:0034220,GO:0035461,GO:0044464,GO:0046942,GO:0051179,GO:0051180,GO:0051181,GO:0051182,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:0090563,GO:0090585,GO:0098656,GO:1903825,GO:1905039 2.7.1.194,2.7.1.197,2.7.1.200,2.7.1.202 ko:K02768,ko:K02769,ko:K02770,ko:K02773,ko:K02798,ko:K02806,ko:K02821,ko:K03491 ko00051,ko00052,ko00053,ko01100,ko01120,ko02060,map00051,map00052,map00053,map01100,map01120,map02060 M00273,M00274,M00279,M00283,M00550 R02704,R03232,R05570,R07671 RC00017,RC03206 ko00000,ko00001,ko00002,ko01000,ko02000,ko03000 4.A.2.1,4.A.2.1.12,4.A.2.1.2,4.A.2.1.24,4.A.2.1.5,4.A.5.1,4.A.7.1 iAF1260.b4195,iBWG_1329.BWG_3907,iECABU_c1320.ECABU_c47530,iECDH10B_1368.ECDH10B_4390,iECDH1ME8569_1439.ECDH1ME8569_4052,iECH74115_1262.ECH74115_5711,iECSP_1301.ECSP_5295,iECUMN_1333.ECUMN_4728,iECs_1301.ECs5171,iEcDH1_1363.EcDH1_3798,iEcSMS35_1347.EcSMS35_4666,iG2583_1286.G2583_5022,iJO1366.b4195,iSbBS512_1146.SbBS512_E4725,iY75_1357.Y75_RS21845,iZ_1308.Z5804,ic_1306.c5284 Bacteria 1V892@1239,3F6HA@33958,4IQ69@91061,COG1762@1,COG1762@2 NA|NA|NA G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HOOMBAJD_00212 568703.LGG_02733 1.2e-213 748.8 Lactobacillaceae ulaG GO:0003674,GO:0003824,GO:0005488,GO:0005975,GO:0005996,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0008150,GO:0008152,GO:0009056,GO:0009109,GO:0009111,GO:0009987,GO:0016052,GO:0016054,GO:0016787,GO:0016788,GO:0019752,GO:0019852,GO:0019854,GO:0030145,GO:0035460,GO:0042365,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0046365,GO:0046395,GO:0046872,GO:0046914,GO:0051186,GO:0051187,GO:0052689,GO:0071704,GO:1901575 ko:K03476 ko00053,ko01100,ko01120,map00053,map01100,map01120 M00550 R07677 RC02793 ko00000,ko00001,ko00002,ko01000 iAF1260.b4192,iAPECO1_1312.APECO1_2200,iBWG_1329.BWG_3904,iEC55989_1330.EC55989_4749,iECDH10B_1368.ECDH10B_4387,iECH74115_1262.ECH74115_5708,iECIAI1_1343.ECIAI1_4425,iECIAI39_1322.ECIAI39_4657,iECO111_1330.ECO111_5022,iECO26_1355.ECO26_5358,iECSE_1348.ECSE_4490,iECSP_1301.ECSP_5292,iECUMN_1333.ECUMN_4725,iECW_1372.ECW_m4554,iEKO11_1354.EKO11_4120,iEcE24377_1341.EcE24377A_4752,iEcHS_1320.EcHS_A4436,iEcolC_1368.EcolC_3821,iJO1366.b4192,iUTI89_1310.UTI89_C4792,iWFL_1372.ECW_m4554,iY75_1357.Y75_RS21830,iYL1228.KPN_04585,ic_1306.c5280 Bacteria 1TSFV@1239,3F58F@33958,4HBNW@91061,COG2220@1,COG2220@2 NA|NA|NA S Beta-lactamase superfamily domain HOOMBAJD_00213 568703.LGG_02734 0.0 2326.2 Lactobacillaceae Bacteria 1TPH1@1239,3F3M5@33958,4HBQH@91061,COG1404@1,COG1404@2 NA|NA|NA O Belongs to the peptidase S8 family HOOMBAJD_00214 568703.LGG_02735 2.6e-42 177.6 Lactobacillaceae Bacteria 1U82Q@1239,2AII8@1,31906@2,3FAGG@33958,4II04@91061 NA|NA|NA HOOMBAJD_00215 568703.LGG_02736 1.6e-155 555.4 Lactobacillaceae bglK_1 Bacteria 1TRQ7@1239,3F3ZI@33958,4HE30@91061,COG1940@1,COG1940@2 NA|NA|NA GK ROK family HOOMBAJD_00216 568703.LGG_02737 9.8e-180 636.0 Lactobacillaceae aspG GO:0005575,GO:0005623,GO:0042597,GO:0044464 3.4.19.5,3.5.1.1,3.5.1.26 ko:K01424,ko:K01444,ko:K13051 ko00250,ko00460,ko00511,ko01100,ko01110,ko04142,map00250,map00460,map00511,map01100,map01110,map04142 R00485 RC00010,RC02798 ko00000,ko00001,ko01000,ko01002 Bacteria 1TSWB@1239,3F3SI@33958,4HED0@91061,COG1446@1,COG1446@2 NA|NA|NA E Asparaginase HOOMBAJD_00217 568703.LGG_02738 4.1e-245 853.6 Lactobacillaceae 3.5.1.18 ko:K01439 ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230 M00016 R02734 RC00064,RC00090 ko00000,ko00001,ko00002,ko01000 Bacteria 1TPEG@1239,3F5AY@33958,4HBQA@91061,COG0624@1,COG0624@2 NA|NA|NA E Peptidase family M20/M25/M40 HOOMBAJD_00218 568703.LGG_02739 1.2e-129 469.2 Lactobacillaceae ymfC ko:K03710 ko00000,ko03000 Bacteria 1V338@1239,3F682@33958,4HGUM@91061,COG2188@1,COG2188@2 NA|NA|NA K UTRA HOOMBAJD_00219 568703.LGG_02740 5.3e-215 753.4 Lactobacillaceae uhpT Bacteria 1TQZ7@1239,3F54C@33958,4HERG@91061,COG0477@1,COG2814@2 NA|NA|NA EGP Major facilitator Superfamily HOOMBAJD_00220 568703.LGG_02741 4.7e-204 716.8 Lactobacillaceae 3.2.1.51 ko:K01206 ko00511,map00511 ko00000,ko00001,ko01000,ko04147 GH29 Bacteria 1TQH2@1239,3F4ZS@33958,4HTW2@91061,COG3669@1,COG3669@2 NA|NA|NA G Alpha-L-fucosidase HOOMBAJD_00221 568703.LGG_02758 7.6e-91 339.7 Lactobacillaceae yjgM ko:K03828 ko00000,ko01000 Bacteria 1VA31@1239,3FBXQ@33958,4HH60@91061,COG0454@1,COG0456@2 NA|NA|NA K Acetyltransferase (GNAT) domain HOOMBAJD_00222 568703.LGG_02759 3.7e-111 407.5 Lactobacillaceae yjhB 3.6.1.13,3.6.1.55 ko:K01515,ko:K03574 ko00230,map00230 R01054 RC00002 ko00000,ko00001,ko01000,ko03400 Bacteria 1U7WX@1239,3F4BS@33958,4HHQT@91061,COG1051@1,COG1051@2 NA|NA|NA F NUDIX domain HOOMBAJD_00224 568703.LGG_02761 2.8e-97 361.3 Lactobacillaceae Bacteria 1VDCA@1239,3F7ZF@33958,4HN0T@91061,COG1476@1,COG1476@2 NA|NA|NA K Helix-turn-helix domain HOOMBAJD_00225 568703.LGG_02762 0.0 3345.8 Lactobacillaceae sca1 ko:K21449 ko00000,ko02000 1.B.40.2 Bacteria 1TR8N@1239,3FC1B@33958,4HEJM@91061,COG1196@1,COG1196@2,COG1501@1,COG1501@2 NA|NA|NA G Belongs to the glycosyl hydrolase 31 family HOOMBAJD_00226 568703.LGG_02763 9.6e-132 476.1 Lactobacillaceae 3.6.1.13,3.6.1.55 ko:K01515,ko:K03574 ko00230,map00230 R01054 RC00002 ko00000,ko00001,ko01000,ko03400 Bacteria 1UZ4E@1239,3FBCZ@33958,4IPMJ@91061,COG1051@1,COG1051@2,COG4111@1,COG4111@2 NA|NA|NA F NUDIX domain HOOMBAJD_00227 568703.LGG_02764 9.9e-108 396.0 Lactobacillaceae pncA GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006206,GO:0006208,GO:0006212,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009112,GO:0009987,GO:0017144,GO:0019860,GO:0034641,GO:0042737,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044424,GO:0044464,GO:0046113,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072527,GO:0072529,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575 ko:K16788 ko00000,ko02000 2.A.88.5 iSB619.SA_RS09955 Bacteria 1V1CY@1239,3F41F@33958,4HFRS@91061,COG1335@1,COG1335@2 NA|NA|NA Q Isochorismatase family HOOMBAJD_00228 568703.LGG_02765 9.5e-264 915.6 Lactobacillaceae pncB GO:0001666,GO:0003674,GO:0003824,GO:0004516,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009605,GO:0009607,GO:0009628,GO:0009987,GO:0016020,GO:0016740,GO:0016757,GO:0016763,GO:0016874,GO:0016879,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019365,GO:0019438,GO:0019637,GO:0019674,GO:0034355,GO:0034641,GO:0034654,GO:0036293,GO:0043094,GO:0043173,GO:0043207,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044403,GO:0044419,GO:0044464,GO:0046483,GO:0046496,GO:0047280,GO:0050896,GO:0051186,GO:0051188,GO:0051701,GO:0051704,GO:0051707,GO:0055086,GO:0070482,GO:0071704,GO:0071944,GO:0072524,GO:0072525,GO:0075136,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.21 ko:K00763 ko00760,ko01100,map00760,map01100 R01724 RC00033 ko00000,ko00001,ko01000 Bacteria 1TPDW@1239,3F3K7@33958,4HAI4@91061,COG1488@1,COG1488@2 NA|NA|NA F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP HOOMBAJD_00229 568703.LGG_02766 3.6e-131 474.2 Lactobacillaceae glpQ 3.1.4.46 ko:K01126 ko00564,map00564 R01030,R01470 RC00017,RC00425 ko00000,ko00001,ko01000 Bacteria 1V3W4@1239,3F4E3@33958,4HFNQ@91061,COG0584@1,COG0584@2 NA|NA|NA C glycerophosphoryl diester phosphodiesterase HOOMBAJD_00230 568703.LGG_02767 3.3e-68 264.2 Lactobacillaceae arsC GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0008794,GO:0016491,GO:0030611,GO:0030613,GO:0030614,GO:0042221,GO:0046685,GO:0050896,GO:0055114 1.20.4.1 ko:K03741 ko00000,ko01000 Bacteria 1V3JW@1239,3F6GQ@33958,4HH49@91061,COG0394@1,COG0394@2 NA|NA|NA T Belongs to the low molecular weight phosphotyrosine protein phosphatase family HOOMBAJD_00231 568703.LGG_02768 6.4e-241 839.7 Lactobacillaceae ugpB ko:K05813 ko02010,map02010 M00198 ko00000,ko00001,ko00002,ko02000 3.A.1.1.3 Bacteria 1TS64@1239,3FC76@33958,4HARC@91061,COG1653@1,COG1653@2 NA|NA|NA G Bacterial extracellular solute-binding protein HOOMBAJD_00232 568703.LGG_02769 2.2e-148 531.6 Lactobacillaceae ugpE ko:K02026,ko:K05815 ko02010,map02010 M00198,M00207 ko00000,ko00001,ko00002,ko02000 3.A.1.1,3.A.1.1.3 Bacteria 1TR0I@1239,3F4Q5@33958,4HB8C@91061,COG0395@1,COG0395@2 NA|NA|NA G ABC transporter permease HOOMBAJD_00233 568703.LGG_02770 4.7e-163 580.5 Lactobacillaceae ugpA ko:K02025,ko:K05814,ko:K15771 ko02010,map02010 M00198,M00207,M00491 ko00000,ko00001,ko00002,ko02000 3.A.1.1,3.A.1.1.16,3.A.1.1.2,3.A.1.1.3 Bacteria 1TREE@1239,3F464@33958,4HCD0@91061,COG1175@1,COG1175@2 NA|NA|NA P ABC-type sugar transport systems, permease components HOOMBAJD_00234 568703.LGG_02771 9.5e-211 739.2 Lactobacillaceae ugpC 3.6.3.20 ko:K05816,ko:K10111,ko:K10112,ko:K17240 ko02010,map02010 M00194,M00196,M00197,M00198,M00200,M00201,M00204,M00206,M00207,M00491,M00599,M00602,M00605,M00606 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.1,3.A.1.1.3,3.A.1.1.38 Bacteria 1TP2M@1239,3FC3B@33958,4HA50@91061,COG3842@1,COG3842@2 NA|NA|NA E Belongs to the ABC transporter superfamily HOOMBAJD_00235 568703.LGG_02772 5.1e-224 783.5 Lactobacillaceae Bacteria 1TRZB@1239,3F4VZ@33958,4HC28@91061,COG0477@1,COG2814@2 NA|NA|NA EGP Major facilitator Superfamily HOOMBAJD_00236 568703.LGG_02773 1.5e-146 525.4 Firmicutes 3.5.2.6 ko:K17836 ko00311,ko01130,ko01501,map00311,map01130,map01501 M00627,M00628 R06363 RC01499 ko00000,ko00001,ko00002,ko01000,ko01504 Bacteria 1VAJP@1239,COG2367@1,COG2367@2 NA|NA|NA V Beta-lactamase enzyme family HOOMBAJD_00237 568703.LGG_02774 4.5e-191 673.7 Lactobacillaceae blaA6 Bacteria 1U828@1239,3F4K3@33958,4HA0Q@91061,COG1680@1,COG1680@2 NA|NA|NA V Beta-lactamase HOOMBAJD_00238 568703.LGG_02775 2.9e-146 524.6 Lactobacillaceae murQ 4.2.1.126 ko:K07106 ko00520,ko01100,map00520,map01100 R08555 RC00397,RC00746 ko00000,ko00001,ko01000 Bacteria 1TPSF@1239,3F4T1@33958,4HBWP@91061,COG2103@1,COG2103@2 NA|NA|NA G Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate HOOMBAJD_00239 568703.LGG_02776 6.9e-162 576.6 Lactobacillaceae ybbH_2 Bacteria 1V26Y@1239,3FBJG@33958,4IQVW@91061,COG1737@1,COG1737@2 NA|NA|NA K Helix-turn-helix domain, rpiR family HOOMBAJD_00240 568703.LGG_02777 7.6e-80 303.1 Lactobacillaceae 2.7.1.191 ko:K02793,ko:K02794 ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060 M00276 R02630 RC00017,RC03206 ko00000,ko00001,ko00002,ko01000,ko02000 4.A.6.1 Bacteria 1V58C@1239,3F79W@33958,4HJ9Y@91061,COG3444@1,COG3444@2 NA|NA|NA G PTS system sorbose subfamily IIB component HOOMBAJD_00241 568703.LGG_02778 1.2e-149 535.8 Lactobacillaceae ko:K02796 ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060 M00276 R02630 RC00017,RC03206 ko00000,ko00001,ko00002,ko02000 4.A.6.1 Bacteria 1UZG2@1239,3F5FR@33958,4IQM5@91061,COG3716@1,COG3716@2 NA|NA|NA G PTS system mannose/fructose/sorbose family IID component HOOMBAJD_00242 568703.LGG_02779 1.8e-129 468.8 Lactobacillaceae ko:K02795 ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060 M00276 R02630 RC00017,RC03206 ko00000,ko00001,ko00002,ko02000 4.A.6.1 Bacteria 1UYP8@1239,3F5ZV@33958,4IQM3@91061,COG3715@1,COG3715@2 NA|NA|NA G PTS system sorbose-specific iic component HOOMBAJD_00244 568703.LGG_02781 2.7e-202 711.1 Lactobacillaceae Bacteria 1U5BI@1239,3F57I@33958,4HE49@91061,COG3568@1,COG3568@2 NA|NA|NA S endonuclease exonuclease phosphatase family protein HOOMBAJD_00245 568703.LGG_02782 1.5e-172 612.1 Lactobacillaceae nrnA GO:0008150,GO:0040007 3.1.13.3,3.1.3.7 ko:K06881 ko00920,ko01100,ko01120,map00920,map01100,map01120 R00188,R00508 RC00078 ko00000,ko00001,ko01000,ko03400 Bacteria 1TPXX@1239,3F4FC@33958,4H9ZW@91061,COG0618@1,COG0618@2 NA|NA|NA S DHHA1 domain protein HOOMBAJD_00246 568703.LGG_02783 8.5e-159 566.2 Lactobacillaceae 1.1.1.346 ko:K06221 R08878 RC00089 ko00000,ko01000 Bacteria 1TPM1@1239,3FB4Q@33958,4H9XJ@91061,COG0656@1,COG0656@2 NA|NA|NA S reductase HOOMBAJD_00247 568703.LGG_02784 2.5e-74 284.6 Lactobacillaceae adhR Bacteria 1V4YT@1239,3FC65@33958,4HI03@91061,COG0789@1,COG0789@2 NA|NA|NA K helix_turn_helix, mercury resistance HOOMBAJD_00248 568703.LGG_02785 3.7e-142 510.8 Lactobacillaceae Bacteria 1TSAZ@1239,3F4S0@33958,4HIIG@91061,COG0500@1,COG2226@2 NA|NA|NA Q Methyltransferase HOOMBAJD_00249 568703.LGG_02787 9.1e-50 202.6 Lactobacillaceae sugE ko:K11741 ko00000,ko02000 2.A.7.1 Bacteria 1VEZX@1239,3F7D6@33958,4HKXB@91061,COG2076@1,COG2076@2 NA|NA|NA U Multidrug resistance protein HOOMBAJD_00251 1231336.L248_2053 1.2e-145 523.5 Lactobacillaceae Bacteria 1V08F@1239,3FBEY@33958,4HUKE@91061,COG1132@1,COG1132@2 NA|NA|NA V ABC transporter transmembrane region HOOMBAJD_00252 568703.LGG_02789 1e-56 225.7 Lactobacillaceae Bacteria 1TVPM@1239,2E9Y3@1,32JRV@2,3FA3I@33958,4I3SR@91061 NA|NA|NA HOOMBAJD_00253 568703.LGG_02790 5.9e-36 156.4 Lactobacillaceae Bacteria 1U80U@1239,2AIE5@1,318VJ@2,3FAE7@33958,4IHY8@91061 NA|NA|NA HOOMBAJD_00254 568703.LGG_02791 6.5e-108 396.7 Lactobacillaceae Bacteria 1UVV8@1239,3FA2P@33958,4IE24@91061,COG1073@1,COG1073@2 NA|NA|NA S alpha beta HOOMBAJD_00255 568703.LGG_02792 6.6e-79 300.1 Lactobacillaceae MA20_25245 Bacteria 1VEEJ@1239,3FBDP@33958,4HP6M@91061,COG0454@1,COG0456@2 NA|NA|NA K FR47-like protein HOOMBAJD_00256 1423732.BALS01000036_gene133 1.7e-77 295.4 Bacilli hisB GO:0000105,GO:0000271,GO:0000287,GO:0003674,GO:0003824,GO:0004401,GO:0004424,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0006082,GO:0006520,GO:0006547,GO:0006629,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0008610,GO:0008652,GO:0008653,GO:0009058,GO:0009059,GO:0009103,GO:0009244,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0019752,GO:0033692,GO:0034200,GO:0034637,GO:0034641,GO:0034645,GO:0042578,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046401,GO:0046483,GO:0046872,GO:0046914,GO:0052803,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1903509 2.7.7.71,3.1.3.15,3.1.3.82,3.1.3.83,4.2.1.19,5.3.1.28,6.3.2.10 ko:K01089,ko:K01929,ko:K02843,ko:K03271,ko:K03273,ko:K15669 ko00300,ko00340,ko00540,ko00550,ko01100,ko01110,ko01230,ko01502,map00300,map00340,map00540,map00550,map01100,map01110,map01230,map01502 M00026,M00064,M00080 R03013,R03457,R04573,R04617,R05645,R05647,R09768,R09769,R09771,R09772 RC00002,RC00017,RC00064,RC00141,RC00434,RC00932 ko00000,ko00001,ko00002,ko01000,ko01003,ko01005,ko01011 GT9 iB21_1397.B21_00198,iEC55989_1330.EC55989_0198,iECBD_1354.ECBD_3418,iECB_1328.ECB_00199,iECD_1391.ECD_00199,iECIAI1_1343.ECIAI1_0202,iECO103_1326.ECO103_0200,iECO111_1330.ECO111_2746,iECS88_1305.ECS88_2121,iECSE_1348.ECSE_0202,iETEC_1333.ETEC_0196,iEcHS_1320.EcHS_A0204,iEcolC_1368.EcolC_3459,iIT341.HP0860,iJN746.PP_0059,iUMNK88_1353.UMNK88_2570 Bacteria 1V6DW@1239,4HJ23@91061,COG0241@1,COG0241@2 NA|NA|NA E HAD-hyrolase-like HOOMBAJD_00257 568703.LGG_02793 2.7e-132 478.0 Lactobacillaceae wzb 3.1.3.48 ko:K01104 ko00000,ko01000 Bacteria 1V6Q5@1239,3F5X1@33958,4HJKY@91061,COG2365@1,COG2365@2 NA|NA|NA T Tyrosine phosphatase family HOOMBAJD_00258 568703.LGG_02794 3.5e-85 320.9 Lactobacillaceae Bacteria 1V8AJ@1239,3F6YY@33958,4HPGU@91061,COG0454@1,COG0456@2 NA|NA|NA K Acetyltransferase (GNAT) domain HOOMBAJD_00259 568703.LGG_02795 1.3e-122 445.7 Lactobacillaceae Bacteria 1VZP6@1239,2DYM8@1,34AAZ@2,3F99W@33958,4HZAB@91061 NA|NA|NA HOOMBAJD_00260 568703.LGG_02796 1.2e-66 259.2 Lactobacillaceae 6.3.3.2 ko:K01934 ko00670,ko01100,map00670,map01100 R02301 RC00183 ko00000,ko00001,ko01000 Bacteria 1V6S0@1239,3F7EV@33958,4HKKR@91061,COG4405@1,COG4405@2 NA|NA|NA S ASCH HOOMBAJD_00261 543734.LCABL_29990 5.2e-81 307.0 Lactobacillaceae rlmH 2.1.1.177 ko:K00783 ko00000,ko01000,ko03009 Bacteria 1V3JM@1239,3F3YX@33958,4HFP8@91061,COG1576@1,COG1576@2 NA|NA|NA J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA HOOMBAJD_00262 568703.LGG_02798 4.1e-198 697.2 Lactobacillaceae ybiR GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 Bacteria 1TQCH@1239,3F4CJ@33958,4HEW7@91061,COG1055@1,COG1055@2 NA|NA|NA P Citrate transporter HOOMBAJD_00263 568703.LGG_02799 6.8e-100 370.5 Lactobacillaceae Bacteria 1U7H9@1239,29Q2V@1,30B3P@2,3F9PB@33958,4IHDU@91061 NA|NA|NA HOOMBAJD_00264 568703.LGG_02800 7.3e-250 869.4 Lactobacillaceae Bacteria 1TP2D@1239,3F541@33958,4HB9G@91061,COG0624@1,COG0624@2 NA|NA|NA E Peptidase dimerisation domain HOOMBAJD_00265 568703.LGG_02801 2.5e-297 1027.3 Lactobacillaceae ko:K02035,ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 M00239,M00439 ko00000,ko00001,ko00002,ko02000 3.A.1.5,3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25 Bacteria 1TNYQ@1239,3F3JE@33958,4HAMK@91061,COG4166@1,COG4166@2 NA|NA|NA E ABC transporter, substratebinding protein HOOMBAJD_00266 568703.LGG_02802 1.3e-133 483.0 Lactobacillaceae Bacteria 1U7DH@1239,29Q2V@1,30B1G@2,3F9FB@33958,4IH9F@91061 NA|NA|NA HOOMBAJD_00267 1423816.BACQ01000031_gene1332 0.0 1146.0 Lactobacillaceae ko:K02099 ko00000,ko03000 Bacteria 1V4GS@1239,3F6QM@33958,4HIT5@91061,COG2207@1,COG2207@2,COG3507@1,COG3507@2 NA|NA|NA K helix_turn_helix, arabinose operon control protein HOOMBAJD_00268 1423816.BACQ01000031_gene1330 3.9e-282 976.9 Lactobacillaceae ko:K03292,ko:K16210 ko00000,ko02000 2.A.2,2.A.2.5 Bacteria 1U037@1239,3F4MV@33958,4HBZK@91061,COG2211@1,COG2211@2 NA|NA|NA G MFS/sugar transport protein HOOMBAJD_00269 1423816.BACQ01000031_gene1329 0.0 1272.7 Lactobacillaceae Bacteria 1TZSZ@1239,2DB7A@1,2Z7KK@2,3F5CP@33958,4HFM6@91061 NA|NA|NA S Glycosyl hydrolase family 115 HOOMBAJD_00270 568703.LGG_02803 0.0 1099.7 Lactobacillaceae cadA Bacteria 1TQ07@1239,3F4JI@33958,4H9SP@91061,COG2217@1,COG2217@2 NA|NA|NA P P-type ATPase HOOMBAJD_00271 568703.LGG_02804 2.7e-76 291.2 Lactobacillaceae hsp3 ko:K13993 ko04141,map04141 ko00000,ko00001,ko03110 Bacteria 1VG0E@1239,3F7R8@33958,4HPDH@91061,COG0071@1,COG0071@2 NA|NA|NA O Hsp20/alpha crystallin family HOOMBAJD_00272 568703.LGG_02805 5.9e-70 270.0 Lactobacillaceae Bacteria 1VY7K@1239,2F916@1,341CT@2,3F70S@33958,4HX4B@91061 NA|NA|NA S Iron-sulphur cluster biosynthesis HOOMBAJD_00273 568703.LGG_02806 2.9e-206 724.5 Lactobacillaceae htrA GO:0008150,GO:0009266,GO:0009628,GO:0050896 3.4.21.107 ko:K04691,ko:K04771 ko01503,ko02020,map01503,map02020 M00728 ko00000,ko00001,ko00002,ko01000,ko01002,ko03110 Bacteria 1TRM8@1239,3F45X@33958,4HA31@91061,COG0265@1,COG0265@2 NA|NA|NA O serine protease HOOMBAJD_00274 568703.LGG_02809 2.7e-154 551.2 Lactobacillaceae vicX 3.1.26.11 ko:K00784 ko03013,map03013 ko00000,ko00001,ko01000,ko03016 Bacteria 1TQ8E@1239,3F3S4@33958,4HAKD@91061,COG1235@1,COG1235@2 NA|NA|NA S domain protein HOOMBAJD_00275 568703.LGG_02810 4.4e-141 507.3 Lactobacillaceae yycI Bacteria 1V1FW@1239,3F3PV@33958,4HFWZ@91061,COG4853@1,COG4853@2 NA|NA|NA S YycH protein HOOMBAJD_00276 568703.LGG_02811 1.8e-259 901.4 Lactobacillaceae yycH Bacteria 1V32Y@1239,3F4HR@33958,4HG2Q@91061,COG4863@1,COG4863@2 NA|NA|NA S YycH protein HOOMBAJD_00277 568703.LGG_02812 0.0 1174.5 Lactobacillaceae vicK 2.7.13.3 ko:K07652 ko02020,map02020 M00459 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Bacteria 1TQ1H@1239,3F45G@33958,4HA52@91061,COG5002@1,COG5002@2 NA|NA|NA T Histidine kinase HOOMBAJD_00278 568703.LGG_02813 8.1e-131 473.0 Lactobacillaceae Bacteria 1TPQG@1239,3F4FB@33958,4HA8Q@91061,COG0745@1,COG0745@2 NA|NA|NA K response regulator HOOMBAJD_00279 568703.LGG_02815 2.7e-123 448.0 Lactobacillaceae Bacteria 1V02M@1239,3FBGC@33958,4HN2K@91061,COG0596@1,COG0596@2 NA|NA|NA S Alpha/beta hydrolase family HOOMBAJD_00280 568703.LGG_02816 9.3e-259 899.0 Lactobacillaceae arpJ ko:K02029,ko:K02030,ko:K17073,ko:K17074 ko02010,map02010 M00236,M00589 ko00000,ko00001,ko00002,ko02000 3.A.1.3,3.A.1.3.20 iSB619.SA_RS09465 Bacteria 1TPM3@1239,3F48Y@33958,4HAS2@91061,COG0765@1,COG0765@2,COG0834@1,COG0834@2 NA|NA|NA P ABC transporter permease HOOMBAJD_00281 568703.LGG_02817 8.8e-234 815.8 Lactobacillaceae argG GO:0000050,GO:0000053,GO:0003674,GO:0003824,GO:0004055,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006575,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0019627,GO:0019752,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:0072350,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.4.5 ko:K01940 ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,ko05418,map00220,map00250,map01100,map01110,map01130,map01230,map05418 M00029,M00844,M00845 R01954 RC00380,RC00629 ko00000,ko00001,ko00002,ko01000,ko04147 iJN678.argG,iSB619.SA_RS04675 Bacteria 1TP3X@1239,3F46X@33958,4HA1E@91061,COG0137@1,COG0137@2 NA|NA|NA E Belongs to the argininosuccinate synthase family. Type 1 subfamily HOOMBAJD_00282 568703.LGG_02818 5e-265 919.8 Lactobacillaceae argH GO:0003674,GO:0003824,GO:0004056,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016829,GO:0016840,GO:0016842,GO:0019752,GO:0042450,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.3.2.1 ko:K01755 ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,map00220,map00250,map01100,map01110,map01130,map01230 M00029,M00844,M00845 R01086 RC00445,RC00447 ko00000,ko00001,ko00002,ko01000,ko04147 Bacteria 1TNZ6@1239,3F4PF@33958,4HB24@91061,COG0165@1,COG0165@2 NA|NA|NA E argininosuccinate lyase HOOMBAJD_00283 568703.LGG_02819 7e-214 749.6 Lactobacillaceae ko:K09963 ko00000 Bacteria 1TRIY@1239,3F4FK@33958,4H9V2@91061,COG3589@1,COG3589@2 NA|NA|NA S Bacterial protein of unknown function (DUF871) HOOMBAJD_00284 568703.LGG_02820 1.2e-73 282.3 Lactobacillaceae Bacteria 1VEZ0@1239,2DQNY@1,337UX@2,3F69F@33958,4HPE2@91061 NA|NA|NA S Domain of unknown function (DUF3284) HOOMBAJD_00285 568703.LGG_02821 3.8e-238 830.5 Lactobacillaceae celB GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008150,GO:0016020,GO:0044464,GO:0051179,GO:0051234,GO:0071702,GO:0071944,GO:1901264,GO:1902815 2.7.1.207 ko:K02761,ko:K02787,ko:K02788 ko00052,ko00500,ko01100,ko02060,map00052,map00500,map01100,map02060 M00275,M00281 R04393,R11170,R11172 RC00017,RC03206 ko00000,ko00001,ko00002,ko01000,ko02000 4.A.3.1,4.A.3.2 iECABU_c1320.ECABU_c19930 Bacteria 1TP8D@1239,3F4VG@33958,4H9W2@91061,COG1455@1,COG1455@2 NA|NA|NA G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane HOOMBAJD_00286 568703.LGG_02822 6.9e-130 469.9 Lactobacillaceae ko:K03489,ko:K03710,ko:K11922 ko00000,ko03000 Bacteria 1TTCD@1239,3F4DA@33958,4HEXQ@91061,COG2188@1,COG2188@2 NA|NA|NA K UbiC transcription regulator-associated domain protein HOOMBAJD_00287 568703.LGG_02823 3e-51 207.6 Lactobacillaceae 2.7.1.196,2.7.1.205 ko:K02760 ko00500,ko02060,map00500,map02060 M00275 R11170,R11172 RC00017,RC03206 ko00000,ko00001,ko00002,ko01000,ko02000 4.A.3.2 Bacteria 1VADE@1239,3F6GU@33958,4HKG9@91061,COG1440@1,COG1440@2 NA|NA|NA G PTS system, Lactose/Cellobiose specific IIB subunit HOOMBAJD_00288 568703.LGG_02824 4.9e-54 216.9 Lactobacillaceae chbA GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006810,GO:0008150,GO:0008643,GO:0009401,GO:0009987,GO:0015144,GO:0016043,GO:0016740,GO:0016772,GO:0016773,GO:0022607,GO:0022804,GO:0022857,GO:0034219,GO:0043933,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0051179,GO:0051234,GO:0051259,GO:0051260,GO:0055085,GO:0065003,GO:0071702,GO:0071840,GO:0090563,GO:0090566,GO:1901264,GO:1902815 2.7.1.196,2.7.1.205 ko:K02759 ko00500,ko02060,map00500,map02060 M00275 R11170,R11172 RC00017,RC03206 ko00000,ko00001,ko00002,ko01000,ko02000 4.A.3.2 iECABU_c1320.ECABU_c17610,iECOK1_1307.ECOK1_1683,iECUMN_1333.ECUMN_2025,iNRG857_1313.NRG857_07575,iUMN146_1321.UM146_09345 Bacteria 1VEGE@1239,3F6Z5@33958,4HM37@91061,COG1447@1,COG1447@2 NA|NA|NA G PTS system, Lactose Cellobiose specific IIA subunit HOOMBAJD_00289 568703.LGG_02825 1.7e-107 395.2 Lactobacillaceae speG ko:K07023 ko00000 Bacteria 1V3W1@1239,3F6G6@33958,4HH6A@91061,COG1670@1,COG1670@2 NA|NA|NA J Acetyltransferase (GNAT) domain HOOMBAJD_00290 568703.LGG_02828 6.3e-81 307.4 Lactobacillaceae Bacteria 1V5NQ@1239,3F674@33958,4HH6Z@91061,COG1051@1,COG1051@2 NA|NA|NA F NUDIX domain HOOMBAJD_00291 568703.LGG_02829 2.5e-89 334.7 Lactobacillaceae Bacteria 1V2CI@1239,3FBXH@33958,4HGAU@91061,COG4639@1,COG4639@2 NA|NA|NA S AAA domain HOOMBAJD_00292 568703.LGG_02830 2.3e-113 414.8 Lactobacillaceae ycaC Bacteria 1V7WN@1239,3F4WV@33958,4HIYX@91061,COG1335@1,COG1335@2 NA|NA|NA Q Isochorismatase family HOOMBAJD_00293 568703.LGG_02831 6.8e-254 882.9 Lactobacillaceae ydiC1 Bacteria 1TPRN@1239,3F5DA@33958,4HBXJ@91061,COG0477@1,COG2814@2 NA|NA|NA EGP Major Facilitator Superfamily HOOMBAJD_00294 568703.LGG_02832 6.5e-210 736.5 Lactobacillaceae yeaN GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0042221,GO:0044464,GO:0046677,GO:0050896,GO:0071944 ko:K03449 ko00000,ko02000 2.A.1.17 Bacteria 1TP9R@1239,3F52B@33958,4H9YZ@91061,COG2807@1,COG2807@2 NA|NA|NA P Transporter, major facilitator family protein HOOMBAJD_00295 568703.LGG_02833 5e-173 613.6 Lactobacillaceae iolS ko:K06607 ko00000,ko01000 Bacteria 1TPIY@1239,3F40K@33958,4HA4Q@91061,COG0667@1,COG0667@2 NA|NA|NA C Aldo keto reductase HOOMBAJD_00296 568703.LGG_02834 4.4e-64 250.4 Lactobacillaceae manO Bacteria 1V6KV@1239,3F719@33958,4HIMF@91061,COG4687@1,COG4687@2 NA|NA|NA S Domain of unknown function (DUF956) HOOMBAJD_00297 568703.LGG_02836 8.7e-170 602.8 Lactobacillaceae manN ko:K02796 ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060 M00276 R02630 RC00017,RC03206 ko00000,ko00001,ko00002,ko02000 4.A.6.1 Bacteria 1TQA3@1239,3F3KR@33958,4HA3K@91061,COG3716@1,COG3716@2 NA|NA|NA G system, mannose fructose sorbose family IID component HOOMBAJD_00298 568703.LGG_02837 1.6e-122 445.7 Lactobacillaceae manY ko:K02795,ko:K02796 ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060 M00276 R02630 RC00017,RC03206 ko00000,ko00001,ko00002,ko02000 4.A.6.1 Bacteria 1TPKK@1239,3F3V5@33958,4H9QI@91061,COG3715@1,COG3715@2 NA|NA|NA G PTS system HOOMBAJD_00299 568703.LGG_02838 1.3e-182 645.6 Lactobacillaceae manL 2.7.1.191 ko:K02793,ko:K02794 ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060 M00276 R02630 RC00017,RC03206 ko00000,ko00001,ko00002,ko01000,ko02000 4.A.6.1 Bacteria 1TQJ4@1239,3F4PU@33958,4H9Z8@91061,COG2893@1,COG2893@2,COG3444@1,COG3444@2 NA|NA|NA G PTS system sorbose subfamily IIB component HOOMBAJD_00300 568703.LGG_02839 9.8e-220 769.2 Lactobacillaceae Bacteria 1UG5D@1239,2ZBIK@2,3FBS8@33958,4H9W5@91061,COG0477@1 NA|NA|NA EGP Major facilitator Superfamily HOOMBAJD_00301 568703.LGG_02840 1e-187 662.5 Lactobacillaceae Bacteria 1V9XM@1239,3F79A@33958,4HJUU@91061,COG1396@1,COG1396@2 NA|NA|NA K Helix-turn-helix XRE-family like proteins HOOMBAJD_00302 568703.LGG_02841 2.3e-148 531.6 Lactobacillaceae ko:K20373 ko02024,map02024 ko00000,ko00001,ko03000 Bacteria 1W2GY@1239,3F8YW@33958,4IGZ7@91061,COG1396@1,COG1396@2 NA|NA|NA K Helix-turn-helix XRE-family like proteins HOOMBAJD_00303 568703.LGG_02842 9.6e-158 562.8 Bacilli Bacteria 1W2SR@1239,4I0B2@91061,COG1396@1,COG1396@2 NA|NA|NA K sequence-specific DNA binding HOOMBAJD_00308 568703.LGG_02846 0.0 1088.9 Lactobacillaceae ybfG Bacteria 1TPV1@1239,3F5J4@33958,4HCRA@91061,COG3409@1,COG3409@2 NA|NA|NA M peptidoglycan-binding domain-containing protein HOOMBAJD_00309 568703.LGG_02848 4e-287 993.4 Lactobacillaceae glnP ko:K02029,ko:K02030,ko:K17073,ko:K17074 ko02010,map02010 M00236,M00589 ko00000,ko00001,ko00002,ko02000 3.A.1.3,3.A.1.3.20 Bacteria 1TPM3@1239,3F48Y@33958,4HAS2@91061,COG0765@1,COG0765@2,COG0834@1,COG0834@2 NA|NA|NA P ABC transporter permease HOOMBAJD_00310 568703.LGG_02849 2.4e-133 481.5 Lactobacillaceae glnQ ko:K17074,ko:K17076 ko02010,map02010 M00589 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.3.20 Bacteria 1TNYD@1239,3F3QQ@33958,4H9WY@91061,COG1126@1,COG1126@2 NA|NA|NA E ABC transporter, ATP-binding protein HOOMBAJD_00311 568703.LGG_02850 3.7e-39 167.2 Lactobacillaceae Bacteria 1U7RB@1239,2AHQJ@1,3182T@2,3FA24@33958,4IHNN@91061 NA|NA|NA HOOMBAJD_00312 568703.LGG_02851 2e-236 824.7 Lactobacillaceae malE ko:K02027,ko:K05813 ko02010,map02010 M00198,M00207 ko00000,ko00001,ko00002,ko02000 3.A.1.1,3.A.1.1.3 Bacteria 1TR68@1239,3F98R@33958,4HX7S@91061,COG1653@1,COG1653@2 NA|NA|NA G Bacterial extracellular solute-binding protein HOOMBAJD_00313 568703.LGG_00891 2e-15 89.0 Lactobacillaceae Bacteria 1U8CV@1239,2BT3F@1,32N80@2,3FAUG@33958,4IIAU@91061 NA|NA|NA HOOMBAJD_00314 568703.LGG_02853 4.8e-131 473.8 Lactobacillaceae Bacteria 1VCPB@1239,3F69G@33958,4HN1D@91061,COG5523@1,COG5523@2 NA|NA|NA S Protein of unknown function (DUF975) HOOMBAJD_00315 568703.LGG_02854 1.5e-58 231.9 Lactobacillaceae yqkB Bacteria 1U783@1239,3F93I@33958,4IH2X@91061,COG4918@1,COG4918@2 NA|NA|NA S Iron-sulphur cluster biosynthesis HOOMBAJD_00316 568703.LGG_02855 1.2e-52 212.2 Lactobacillaceae Bacteria 1W3JF@1239,298U1@1,2ZVY8@2,3F7JE@33958,4I1SS@91061 NA|NA|NA HOOMBAJD_00317 568703.LGG_02857 1.9e-80 305.1 Lactobacillaceae ko:K09167 ko00000 Bacteria 1VFTS@1239,3F6GM@33958,4HGMB@91061,COG3402@1,COG3402@2 NA|NA|NA S Bacterial PH domain HOOMBAJD_00318 568703.LGG_02858 1.4e-284 984.9 Lactobacillaceae ydbT ko:K08981 ko00000 Bacteria 1TSRJ@1239,3F3VB@33958,4HB8P@91061,COG3428@1,COG3428@2 NA|NA|NA S Bacterial PH domain HOOMBAJD_00319 568703.LGG_02859 3.8e-142 510.8 Lactobacillaceae Bacteria 1TSWP@1239,3F8H5@33958,4HBQT@91061,COG3910@1,COG3910@2 NA|NA|NA S AAA ATPase domain HOOMBAJD_00320 568703.LGG_02860 4.3e-166 590.5 Lactobacillaceae yniA GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0044237 Bacteria 1U79A@1239,3F3RK@33958,4HAZS@91061,COG3001@1,COG3001@2 NA|NA|NA G Phosphotransferase enzyme family HOOMBAJD_00321 568703.LGG_02861 2.6e-132 478.0 Lactobacillaceae glnQ 3.6.3.21 ko:K02028,ko:K10038 ko02010,map02010 M00227,M00236 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.3,3.A.1.3.2 Bacteria 1TNYD@1239,3F3QQ@33958,4H9WY@91061,COG1126@1,COG1126@2 NA|NA|NA E ABC transporter, ATP-binding protein HOOMBAJD_00322 568703.LGG_02862 2.1e-255 887.9 Lactobacillaceae glnP ko:K02029,ko:K02030,ko:K17073,ko:K17074 ko02010,map02010 M00236,M00589 ko00000,ko00001,ko00002,ko02000 3.A.1.3,3.A.1.3.20 Bacteria 1TQUG@1239,3F4HA@33958,4HAJ5@91061,COG0765@1,COG0765@2,COG0834@1,COG0834@2 NA|NA|NA P ABC transporter HOOMBAJD_00323 568703.LGG_02863 3.3e-264 917.1 Lactobacillaceae glnP ko:K02029,ko:K02030,ko:K17073,ko:K17074 ko02010,map02010 M00236,M00589 ko00000,ko00001,ko00002,ko02000 3.A.1.3,3.A.1.3.20 Bacteria 1TQUG@1239,3F4HA@33958,4HAJ5@91061,COG0765@1,COG0765@2,COG0834@1,COG0834@2 NA|NA|NA P ABC transporter HOOMBAJD_00324 568703.LGG_02864 8.3e-99 366.3 Lactobacillaceae ydaF ko:K03817 ko00000,ko01000,ko03009 Bacteria 1V3NE@1239,3F6YW@33958,4HG1N@91061,COG1670@1,COG1670@2 NA|NA|NA J Acetyltransferase (GNAT) domain HOOMBAJD_00325 568703.LGG_02865 9.7e-104 382.9 Lactobacillaceae ko:K06384 ko00000 Bacteria 1VFG7@1239,3F7WH@33958,4IRI6@91061,COG1300@1,COG1300@2 NA|NA|NA S Stage II sporulation protein M HOOMBAJD_00326 568703.LGG_02866 6.4e-168 596.7 Lactobacillaceae yeaC GO:0005575,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 ko:K03924 ko00000,ko01000 Bacteria 1TPKR@1239,3F59F@33958,4HA0T@91061,COG0714@1,COG0714@2 NA|NA|NA S ATPase family associated with various cellular activities (AAA) HOOMBAJD_00327 1423816.BACQ01000031_gene1277 7.1e-133 480.3 Lactobacillaceae yeaD Bacteria 1VNZZ@1239,3F8YE@33958,4IGYV@91061,COG1721@1,COG1721@2 NA|NA|NA S Protein of unknown function DUF58 HOOMBAJD_00328 568703.LGG_02868 0.0 1299.3 Lactobacillaceae yebA Bacteria 1TP8K@1239,3F5PB@33958,4HB2E@91061,COG1305@1,COG1305@2 NA|NA|NA E Transglutaminase/protease-like homologues HOOMBAJD_00329 568703.LGG_02869 7e-214 749.6 Lactobacillaceae lsgC Bacteria 1TPHK@1239,3F5EZ@33958,4HAXV@91061,COG0438@1,COG0438@2 NA|NA|NA M Glycosyl transferases group 1 HOOMBAJD_00330 568703.LGG_02872 4.6e-255 886.7 Lactobacillaceae aspA 4.2.1.2,4.3.1.1 ko:K01679,ko:K01744 ko00020,ko00250,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko04934,ko05200,ko05211,map00020,map00250,map00620,map00720,map01100,map01110,map01120,map01130,map01200,map04934,map05200,map05211 M00009,M00011,M00173,M00376 R00490,R01082 RC00316,RC00443,RC02799 ko00000,ko00001,ko00002,ko01000 Bacteria 1TP3U@1239,3FBTC@33958,4HFM9@91061,COG1027@1,COG1027@2 NA|NA|NA E Fumarase C C-terminus HOOMBAJD_00333 1423816.BACQ01000031_gene1273 6.3e-197 693.3 Lactobacillaceae mez_1 1.1.1.38 ko:K00027 ko00620,ko01200,ko02020,map00620,map01200,map02020 R00214 RC00105 ko00000,ko00001,ko01000 Bacteria 1TPJ3@1239,3F4GN@33958,4H9WR@91061,COG0281@1,COG0281@2 NA|NA|NA C Malic enzyme, NAD binding domain HOOMBAJD_00334 568703.LGG_02877 2.9e-222 777.7 Lactobacillaceae maeN ko:K11616 ko02020,map02020 ko00000,ko00001 2.A.24.2 Bacteria 1TR97@1239,3F61N@33958,4HBS8@91061,COG3493@1,COG3493@2 NA|NA|NA C 2-hydroxycarboxylate transporter family HOOMBAJD_00335 568703.LGG_02878 1.8e-268 931.4 Lactobacillaceae dcuS GO:0000155,GO:0000160,GO:0003674,GO:0003824,GO:0004672,GO:0004673,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006355,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0016020,GO:0016021,GO:0016043,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016775,GO:0018106,GO:0018193,GO:0018202,GO:0019219,GO:0019222,GO:0019538,GO:0022607,GO:0023014,GO:0023052,GO:0031224,GO:0031226,GO:0031323,GO:0031326,GO:0035556,GO:0036211,GO:0042802,GO:0043170,GO:0043412,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0051259,GO:0051260,GO:0051716,GO:0060255,GO:0065003,GO:0065007,GO:0071704,GO:0071840,GO:0071944,GO:0080090,GO:0140096,GO:1901564,GO:1903506,GO:2000112,GO:2001141 2.7.13.3 ko:K02476,ko:K07701,ko:K07706,ko:K11614 ko02020,ko02024,map02020,map02024 M00488,M00490,M00495 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Bacteria 1TQJR@1239,3F62P@33958,4H9Q0@91061,COG3290@1,COG3290@2 NA|NA|NA T Single cache domain 3 HOOMBAJD_00336 568703.LGG_02879 4.1e-119 434.1 Lactobacillaceae dpiA ko:K02475,ko:K11615 ko02020,map02020 M00490 ko00000,ko00001,ko00002,ko02022 Bacteria 1V3PK@1239,3F702@33958,4HGXB@91061,COG4565@1,COG4565@2 NA|NA|NA KT cheY-homologous receiver domain HOOMBAJD_00337 568703.LGG_02880 5.5e-95 353.6 Lactobacillaceae Bacteria 1U7MH@1239,29Q7E@1,30B6F@2,3F9WQ@33958,4IHIP@91061 NA|NA|NA HOOMBAJD_00338 1545702.LACWKB8_0421 3.7e-118 431.4 Lactobacillaceae hprA 1.1.1.29 ko:K00018 ko00260,ko00630,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,map00260,map00630,map00680,map01100,map01110,map01120,map01130,map01200 M00346 R00717,R01388 RC00031,RC00042 ko00000,ko00001,ko00002,ko01000 Bacteria 1TPCX@1239,3F4Z6@33958,4HASY@91061,COG1052@1,COG1052@2 NA|NA|NA CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family HOOMBAJD_00340 568703.LGG_02881 1.8e-148 531.9 Lactobacillaceae 1.1.1.31 ko:K00020 ko00280,ko01100,map00280,map01100 R05066 RC00099 ko00000,ko00001,ko01000 Bacteria 1U5HC@1239,3F5Y9@33958,4IF86@91061,COG2084@1,COG2084@2 NA|NA|NA I NAD binding domain of 6-phosphogluconate dehydrogenase HOOMBAJD_00341 568703.LGG_02882 1.4e-68 265.4 Lactobacillaceae Bacteria 1U5V4@1239,29NYR@1,309WU@2,3F6J0@33958,4IFIS@91061 NA|NA|NA HOOMBAJD_00342 568703.LGG_02883 1.6e-131 475.3 Lactobacillaceae yfeJ 6.3.5.2 ko:K01951 ko00230,ko00983,ko01100,map00230,map00983,map01100 M00050 R01230,R01231,R08244 RC00010,RC00204 ko00000,ko00001,ko00002,ko01000,ko01002 Bacteria 1UAH0@1239,3FBR7@33958,4IS2F@91061,COG0518@1,COG0518@2 NA|NA|NA F Glutamine amidotransferase class-I HOOMBAJD_00343 568703.LGG_02884 5.8e-169 600.1 Lactobacillaceae Bacteria 1TPCZ@1239,3F4I6@33958,4HC7A@91061,COG0826@1,COG0826@2 NA|NA|NA O protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity HOOMBAJD_00345 568703.LGG_02906 8.8e-170 602.8 Lactobacillaceae prs 2.7.6.1 ko:K00948 ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230 M00005 R01049 RC00002,RC00078 ko00000,ko00001,ko00002,ko01000 iAF987.Gmet_2848 Bacteria 1TQ6Q@1239,3F3V8@33958,4HB61@91061,COG0462@1,COG0462@2 NA|NA|NA F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) HOOMBAJD_00346 568703.LGG_02907 1.2e-179 635.6 Lactobacillaceae ko:K06889 ko00000 Bacteria 1TQYU@1239,3F43H@33958,4HC4H@91061,COG1073@1,COG1073@2 NA|NA|NA D Alpha beta HOOMBAJD_00347 568703.LGG_02908 5.9e-185 653.3 Lactobacillaceae lipA Bacteria 1V2AW@1239,3F3N7@33958,4HU2V@91061,COG0657@1,COG0657@2 NA|NA|NA I Carboxylesterase family HOOMBAJD_00348 568703.LGG_02909 3.5e-216 757.3 Lactobacillaceae mtlD GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006059,GO:0006066,GO:0008150,GO:0008152,GO:0008926,GO:0009056,GO:0009987,GO:0016052,GO:0016491,GO:0016614,GO:0016616,GO:0019400,GO:0019405,GO:0019407,GO:0019592,GO:0019594,GO:0019751,GO:0044237,GO:0044238,GO:0044248,GO:0044262,GO:0044275,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046164,GO:0046174,GO:0055114,GO:0071704,GO:1901575,GO:1901615,GO:1901616 1.1.1.17 ko:K00009 ko00051,map00051 R02703 RC00085 ko00000,ko00001,ko01000 iSBO_1134.SBO_3598,iSbBS512_1146.SbBS512_E4017 Bacteria 1TPZU@1239,3F448@33958,4H9S3@91061,COG0246@1,COG0246@2 NA|NA|NA C mannitol-1-phosphate 5-dehydrogenase activity HOOMBAJD_00349 568703.LGG_02910 1e-78 299.3 Lactobacillaceae mtlF 2.7.1.197 ko:K02798,ko:K02799,ko:K02800 ko00051,ko02060,map00051,map02060 M00274 R02704 RC00017,RC03206 ko00000,ko00001,ko00002,ko01000,ko02000 4.A.2.1.12,4.A.2.1.2,4.A.2.1.24,4.A.2.1.5 Bacteria 1V77P@1239,3F6EP@33958,4HIM2@91061,COG4668@1,COG4668@2 NA|NA|NA G catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane HOOMBAJD_00350 568703.LGG_02911 0.0 1292.3 Lactobacillaceae mtlR ko:K03483 ko00000,ko03000 Bacteria 1TQT1@1239,3F561@33958,4HABH@91061,COG3711@1,COG3711@2 NA|NA|NA K Mga helix-turn-helix domain HOOMBAJD_00351 568703.LGG_02912 0.0 1147.9 Lactobacillaceae mtlA GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008150,GO:0008643,GO:0009401,GO:0015144,GO:0016020,GO:0016740,GO:0016772,GO:0016773,GO:0022804,GO:0022857,GO:0034219,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:0090563 2.7.1.197 ko:K02799,ko:K02800 ko00051,ko02060,map00051,map02060 M00274 R02704 RC00017,RC03206 ko00000,ko00001,ko00002,ko01000,ko02000 4.A.2.1.12,4.A.2.1.2,4.A.2.1.24,4.A.2.1.5 Bacteria 1TPE3@1239,3F52S@33958,4HAVV@91061,COG2213@1,COG2213@2 NA|NA|NA G PTS system, Lactose/Cellobiose specific IIB subunit HOOMBAJD_00352 568703.LGG_02913 2.8e-131 474.6 Lactobacillaceae nagB GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006040,GO:0008150,GO:0008152,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:1901135 3.1.1.31,3.5.99.6 ko:K01057,ko:K02564 ko00030,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00520,map01100,map01110,map01120,map01130,map01200 M00004,M00006,M00008 R00765,R02035 RC00163,RC00537 ko00000,ko00001,ko00002,ko01000 Bacteria 1TP10@1239,3F3NR@33958,4HAG4@91061,COG0363@1,COG0363@2 NA|NA|NA G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion HOOMBAJD_00353 568703.LGG_02914 3.3e-149 534.3 Lactobacillaceae Bacteria 1TSZZ@1239,3F49K@33958,4HB54@91061,COG0561@1,COG0561@2 NA|NA|NA S haloacid dehalogenase-like hydrolase HOOMBAJD_00354 568703.LGG_02915 2.8e-44 184.1 Lactobacillaceae Bacteria 1U774@1239,29PY5@1,30AWK@2,3F926@33958,4IH1Y@91061 NA|NA|NA HOOMBAJD_00355 568703.LGG_02916 2e-14 84.3 Lactobacillaceae Bacteria 1U8EV@1239,2BZTI@1,302JZ@2,3FAWN@33958,4IICR@91061 NA|NA|NA HOOMBAJD_00356 568703.LGG_02917 4.1e-136 490.7 Lactobacillaceae Bacteria 1VGHT@1239,2E9FK@1,333NY@2,3F7UD@33958,4HP5Z@91061 NA|NA|NA HOOMBAJD_00357 568703.LGG_02918 4.4e-222 776.9 Lactobacillaceae spiA ko:K18831 ko00000,ko02048,ko03000 Bacteria 1TSEK@1239,3F5TB@33958,4HBGW@91061,COG1476@1,COG1476@2,COG2856@1,COG2856@2 NA|NA|NA K IrrE N-terminal-like domain HOOMBAJD_00358 568703.LGG_02919 1.1e-144 519.6 Lactobacillaceae bacG ko:K02005 ko00000 Bacteria 1TT2M@1239,3F5MV@33958,4HG99@91061,COG0845@1,COG0845@2 NA|NA|NA M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family HOOMBAJD_00359 568703.LGG_02920 2e-126 458.4 Lactobacillaceae ko:K02003 M00258 ko00000,ko00002,ko02000 3.A.1 Bacteria 1TPBJ@1239,3F4CA@33958,4HFUH@91061,COG1136@1,COG1136@2 NA|NA|NA V ABC transporter HOOMBAJD_00360 568703.LGG_02921 8.1e-208 729.6 Lactobacillaceae bacI ko:K02004 M00258 ko00000,ko00002,ko02000 3.A.1 Bacteria 1TPUU@1239,3F5FN@33958,4HBY9@91061,COG0577@1,COG0577@2 NA|NA|NA V MacB-like periplasmic core domain HOOMBAJD_00361 1423747.BAMJ01000053_gene2145 1.1e-90 340.1 Lactobacillaceae 1.6.5.5 ko:K00344 ko00000,ko01000 Bacteria 1VZMF@1239,3F5Z3@33958,4HY0D@91061,COG0604@1,COG0604@2 NA|NA|NA C nadph quinone reductase HOOMBAJD_00362 1423806.JCM15457_1152 3.6e-74 285.0 Lactobacillaceae ko:K20391 ko02024,map02024 ko00000,ko00001,ko03000 Bacteria 1U4VN@1239,3FBDK@33958,4IPPT@91061,COG1396@1,COG1396@2 NA|NA|NA K Helix-turn-helix XRE-family like proteins HOOMBAJD_00363 797515.HMPREF9103_03153 6.4e-30 137.1 Lactobacillaceae Bacteria 1VYYP@1239,2CARX@1,34BQY@2,3F7EH@33958,4HYXX@91061 NA|NA|NA HOOMBAJD_00364 568703.LGG_02922 1.1e-180 639.4 Lactobacillaceae Bacteria 1U5WE@1239,2DKMH@1,309XQ@2,3F6MD@33958,4IFK1@91061 NA|NA|NA HOOMBAJD_00365 568703.LGG_02923 0.0 2074.3 Lactobacillaceae ko:K15125 ko05133,map05133 ko00000,ko00001,ko00536 Bacteria 1VE5U@1239,3FBXI@33958,4ITNN@91061,COG3209@1,COG3209@2,COG3210@1,COG3210@2 NA|NA|NA M Leucine rich repeats (6 copies) HOOMBAJD_00366 568703.LGG_02923 0.0 1424.1 Lactobacillaceae ko:K15125 ko05133,map05133 ko00000,ko00001,ko00536 Bacteria 1VE5U@1239,3FBXI@33958,4ITNN@91061,COG3209@1,COG3209@2,COG3210@1,COG3210@2 NA|NA|NA M Leucine rich repeats (6 copies) HOOMBAJD_00367 568703.LGG_02923 1.5e-232 813.1 Lactobacillaceae ko:K15125 ko05133,map05133 ko00000,ko00001,ko00536 Bacteria 1VE5U@1239,3FBXI@33958,4ITNN@91061,COG3209@1,COG3209@2,COG3210@1,COG3210@2 NA|NA|NA M Leucine rich repeats (6 copies) HOOMBAJD_00368 568703.LGG_02924 6.7e-223 779.6 Lactobacillaceae mtnE 2.6.1.83 ko:K08969,ko:K10206 ko00270,ko00300,ko01100,ko01110,ko01130,ko01230,map00270,map00300,map01100,map01110,map01130,map01230 M00034,M00527 R07396,R07613 RC00006,RC01847 ko00000,ko00001,ko00002,ko01000,ko01007 Bacteria 1TQD6@1239,3F4TW@33958,4HAHQ@91061,COG0436@1,COG0436@2 NA|NA|NA E Aminotransferase HOOMBAJD_00369 568703.LGG_02925 1.4e-139 502.3 Lactobacillaceae mtnU 3.5.1.3 ko:K11206,ko:K13566 ko00250,map00250 R00269,R00348 RC00010 ko00000,ko00001,ko01000 Bacteria 1TQDK@1239,3F4ND@33958,4HC44@91061,COG0388@1,COG0388@2 NA|NA|NA S Carbon-nitrogen hydrolase HOOMBAJD_00370 568703.LGG_02926 2.7e-149 534.6 Lactobacillaceae ko:K02073 ko02010,map02010 M00238 ko00000,ko00001,ko00002,ko02000 3.A.1.24 Bacteria 1TQAS@1239,3F632@33958,4HD2T@91061,COG1464@1,COG1464@2 NA|NA|NA M NLPA lipoprotein HOOMBAJD_00373 1231336.L248_0573 2.8e-60 238.4 Lactobacillaceae Bacteria 1U65Z@1239,3F75B@33958,4IFW0@91061,COG5340@1,COG5340@2 NA|NA|NA K Psort location Cytoplasmic, score HOOMBAJD_00374 568703.LGG_02928 5.8e-197 693.3 Lactobacillaceae gldA GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0008150,GO:0008152,GO:0016491,GO:0016614,GO:0016616,GO:0042802,GO:0047545,GO:0055114 1.1.1.1,1.1.1.6 ko:K00001,ko:K00005,ko:K08317 ko00010,ko00071,ko00350,ko00561,ko00625,ko00626,ko00640,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00561,map00625,map00626,map00640,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220 R00623,R00754,R01034,R02124,R04805,R04880,R05233,R05234,R06917,R06927,R07105,R08281,R08306,R08310,R10715,R10717 RC00029,RC00050,RC00087,RC00088,RC00099,RC00116,RC00117,RC00649,RC00670,RC01734,RC02273 ko00000,ko00001,ko01000 iJN678.gldA Bacteria 1TQFU@1239,3F4E4@33958,4HC8K@91061,COG0371@1,COG0371@2 NA|NA|NA C dehydrogenase HOOMBAJD_00376 568703.LGG_02931 2e-222 778.1 Lactobacillaceae amd 3.5.1.47 ko:K01436,ko:K05823,ko:K12941 ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230 M00525 R02733 RC00064,RC00300 ko00000,ko00001,ko00002,ko01000,ko01002 Bacteria 1TPD7@1239,3FC42@33958,4H9WQ@91061,COG1473@1,COG1473@2 NA|NA|NA E Peptidase family M20/M25/M40 HOOMBAJD_00377 568703.LGG_02932 2.6e-80 304.7 Lactobacillaceae Bacteria 1V6P0@1239,3F706@33958,4HJ1Y@91061,COG3610@1,COG3610@2 NA|NA|NA S Threonine/Serine exporter, ThrE HOOMBAJD_00378 568703.LGG_02933 3.2e-133 481.1 Lactobacillaceae thrE Bacteria 1TSE8@1239,3F4XE@33958,4HBW1@91061,COG2966@1,COG2966@2 NA|NA|NA S Putative threonine/serine exporter HOOMBAJD_00380 568703.LGG_02935 7.2e-30 136.0 Lactobacillaceae Bacteria 1U791@1239,2BHN3@1,32BQX@2,3F94X@33958,4IH3V@91061 NA|NA|NA HOOMBAJD_00381 568703.LGG_02936 2.3e-274 951.0 Lactobacillaceae ko:K06148 ko00000,ko02000 3.A.1 Bacteria 1V08F@1239,3F517@33958,4HTAU@91061,COG1132@1,COG1132@2 NA|NA|NA V ABC transporter transmembrane region HOOMBAJD_00382 568703.LGG_02937 0.0 1244.2 Lactobacillaceae gidA GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009314,GO:0009411,GO:0009416,GO:0009451,GO:0009628,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0050896,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 ko:K03495 R08701 RC00053,RC00209,RC00870 ko00000,ko03016,ko03036 Bacteria 1TQ4B@1239,3F454@33958,4HA6S@91061,COG0445@1,COG0445@2 NA|NA|NA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 HOOMBAJD_00383 568703.LGG_02938 3.6e-252 877.1 Lactobacillaceae mnmE GO:0003674,GO:0005488,GO:0005515,GO:0042802 ko:K03650 R08701 RC00053,RC00209,RC00870 ko00000,ko01000,ko03016 Bacteria 1TPJF@1239,3F3WA@33958,4HA06@91061,COG0486@1,COG0486@2 NA|NA|NA S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 HOOMBAJD_00384 568703.LGG_02940 1.3e-137 495.7 Lactobacillaceae jag ko:K06346 ko00000 Bacteria 1V3IN@1239,3F5WG@33958,4HHHU@91061,COG1847@1,COG1847@2 NA|NA|NA S R3H domain protein HOOMBAJD_00385 568703.LGG_02941 6.4e-138 496.9 Lactobacillaceae yidC ko:K03217 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 ko00000,ko00001,ko00002,ko02044,ko03029 2.A.9 Bacteria 1TQ0J@1239,3F3SD@33958,4HB3J@91061,COG0706@1,COG0706@2 NA|NA|NA U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins HOOMBAJD_00386 568703.LGG_02942 1.9e-59 235.0 Lactobacillaceae rnpA GO:0000966,GO:0001682,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004526,GO:0004540,GO:0004549,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005655,GO:0005730,GO:0006139,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0030677,GO:0030681,GO:0031123,GO:0031404,GO:0031974,GO:0031981,GO:0032991,GO:0033204,GO:0034414,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0040007,GO:0042301,GO:0042779,GO:0042780,GO:0042781,GO:0043167,GO:0043168,GO:0043170,GO:0043199,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043628,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044452,GO:0044464,GO:0046483,GO:0070013,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0099116,GO:0140098,GO:0140101,GO:1901360,GO:1901363,GO:1901681,GO:1902494,GO:1902555,GO:1905267,GO:1905348,GO:1990904 3.1.26.5 ko:K03536,ko:K08998 ko00000,ko01000,ko03016 Bacteria 1VA78@1239,3F6GS@33958,4HKG6@91061,COG0594@1,COG0594@2 NA|NA|NA J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme HOOMBAJD_00387 543734.LCABL_31270 1.1e-15 88.2 Lactobacillaceae rpmH GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02914 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1VK90@1239,3F81W@33958,4HR2Z@91061,COG0230@1,COG0230@2 NA|NA|NA J Belongs to the bacterial ribosomal protein bL34 family HOOMBAJD_00388 568703.LGG_00001 3.5e-252 877.1 Lactobacillaceae dnaA GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0034641,GO:0034645,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576,GO:1990837 ko:K02313 ko02020,ko04112,map02020,map04112 ko00000,ko00001,ko03032,ko03036 Bacteria 1TPV7@1239,3F3YA@33958,4H9MW@91061,COG0593@1,COG0593@2 NA|NA|NA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids HOOMBAJD_00389 568703.LGG_00002 5.2e-204 716.8 Lactobacillaceae dnaN 2.7.7.7 ko:K02338 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Bacteria 1TQ7J@1239,3F3ZQ@33958,4H9TF@91061,COG0592@1,COG0592@2 NA|NA|NA L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria HOOMBAJD_00391 568703.LGG_00003 2.9e-31 140.6 Lactobacillaceae yaaA GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 ko:K14761 ko00000,ko03009 Bacteria 1VEJ2@1239,3F803@33958,4HNMC@91061,COG2501@1,COG2501@2 NA|NA|NA S S4 domain protein YaaA HOOMBAJD_00392 568703.LGG_00004 7.3e-203 713.0 Lactobacillaceae recF GO:0000731,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009295,GO:0009987,GO:0018130,GO:0019438,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043590,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:1901360,GO:1901362,GO:1901576 ko:K03629 ko03440,map03440 ko00000,ko00001,ko03400 Bacteria 1TP9U@1239,3F3Q1@33958,4HA0W@91061,COG1195@1,COG1195@2 NA|NA|NA L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP HOOMBAJD_00393 568703.LGG_00005 0.0 1291.6 Lactobacillaceae gyrB GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0003916,GO:0003918,GO:0005488,GO:0005524,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006265,GO:0006725,GO:0006807,GO:0006996,GO:0007059,GO:0008094,GO:0008144,GO:0008150,GO:0008152,GO:0009295,GO:0009987,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016887,GO:0017076,GO:0017111,GO:0030312,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034335,GO:0034641,GO:0035639,GO:0036094,GO:0040007,GO:0042623,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044464,GO:0046483,GO:0046872,GO:0051276,GO:0061505,GO:0071103,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0097159,GO:0097367,GO:0140097,GO:1901265,GO:1901360,GO:1901363 5.99.1.3 ko:K02470,ko:K02622 ko00000,ko01000,ko02048,ko03032,ko03036,ko03400 Bacteria 1TQ0R@1239,3F48M@33958,4H9Y6@91061,COG0187@1,COG0187@2 NA|NA|NA L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner HOOMBAJD_00394 568703.LGG_00006 0.0 1690.6 Lactobacillaceae gyrA GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0003916,GO:0003918,GO:0005488,GO:0005524,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006265,GO:0006725,GO:0006807,GO:0006996,GO:0008094,GO:0008144,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016887,GO:0017076,GO:0017111,GO:0030312,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034335,GO:0034641,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044464,GO:0046483,GO:0046872,GO:0051276,GO:0061505,GO:0071103,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0097159,GO:0097367,GO:0140097,GO:1901265,GO:1901360,GO:1901363 5.99.1.3 ko:K02469,ko:K02621 ko00000,ko01000,ko02048,ko03032,ko03036,ko03400 Bacteria 1TP2Z@1239,3F3YM@33958,4HAHY@91061,COG0188@1,COG0188@2 NA|NA|NA L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner HOOMBAJD_00396 568703.LGG_00121 0.0 1286.6 Lactobacillaceae yybT Bacteria 1TPGP@1239,3F3TY@33958,4HBVH@91061,COG3887@1,COG3887@2 NA|NA|NA T signaling protein consisting of a modified GGDEF domain and a DHH domain HOOMBAJD_00397 568703.LGG_00122 5.1e-70 270.4 Lactobacillaceae rplI GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0030312,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0071704,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02939 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1V6QG@1239,3F68P@33958,4HIKJ@91061,COG0359@1,COG0359@2 NA|NA|NA J Binds to the 23S rRNA HOOMBAJD_00398 568703.LGG_00123 1.7e-246 858.2 Lactobacillaceae dnaB GO:0003674,GO:0003678,GO:0003824,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006268,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0032392,GO:0032508,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051276,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360,GO:1901576 3.6.4.12 ko:K02314 ko03030,ko04112,map03030,map04112 ko00000,ko00001,ko01000,ko03032 Bacteria 1TPCT@1239,3F4MW@33958,4H9Y8@91061,COG0305@1,COG0305@2 NA|NA|NA L Participates in initiation and elongation during chromosome replication HOOMBAJD_00399 568703.LGG_00124 2.1e-221 774.6 Lactobacillaceae Bacteria 1U598@1239,2CC2J@1,309K5@2,3F58S@33958,4IF0I@91061 NA|NA|NA HOOMBAJD_00400 568703.LGG_00125 0.0 1202.2 Lactobacillaceae sacX GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008150,GO:0008643,GO:0009401,GO:0015144,GO:0016020,GO:0016740,GO:0016772,GO:0016773,GO:0022804,GO:0022857,GO:0034219,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:0090563,GO:0090588 2.7.1.199,2.7.1.208,2.7.1.211 ko:K02755,ko:K02756,ko:K02757,ko:K02790,ko:K02791,ko:K02808,ko:K02809,ko:K02810 ko00010,ko00500,ko00520,ko02060,map00010,map00500,map00520,map02060 M00266,M00269,M00271 R00811,R02738,R04111 RC00017,RC03206 ko00000,ko00001,ko00002,ko01000,ko02000 4.A.1.1.3,4.A.1.2.1,4.A.1.2.10,4.A.1.2.11,4.A.1.2.12,4.A.1.2.2,4.A.1.2.5,4.A.1.2.6,4.A.1.2.9 Bacteria 1TP5X@1239,3F458@33958,4HA0I@91061,COG1263@1,COG1263@2,COG1264@1,COG1264@2,COG2190@1,COG2190@2 NA|NA|NA G phosphotransferase system HOOMBAJD_00401 568703.LGG_00126 8.9e-162 576.2 Lactobacillaceae murQ 4.2.1.126 ko:K07106 ko00520,ko01100,map00520,map01100 R08555 RC00397,RC00746 ko00000,ko00001,ko01000 Bacteria 1TPSF@1239,3F4T1@33958,4HBWP@91061,COG2103@1,COG2103@2 NA|NA|NA G Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate HOOMBAJD_00402 568703.LGG_00127 1e-198 699.1 Lactobacillaceae 4.2.1.126 ko:K07106,ko:K09963 ko00520,ko01100,map00520,map01100 R08555 RC00397,RC00746 ko00000,ko00001,ko01000 Bacteria 1TRIY@1239,3FB4D@33958,4HAHJ@91061,COG3589@1,COG3589@2 NA|NA|NA S Bacterial protein of unknown function (DUF871) HOOMBAJD_00403 568703.LGG_00128 1.8e-156 558.5 Lactobacillaceae Bacteria 1TPIX@1239,3F5WQ@33958,4HBJA@91061,COG1737@1,COG1737@2 NA|NA|NA K Helix-turn-helix domain, rpiR family HOOMBAJD_00404 568703.LGG_00129 9.1e-107 392.9 Lactobacillaceae Bacteria 1V9XI@1239,3F77G@33958,4HJ7Q@91061,COG1309@1,COG1309@2 NA|NA|NA K Transcriptional regulator C-terminal region HOOMBAJD_00405 568703.LGG_00130 5.4e-127 460.3 Lactobacillaceae ko:K02003,ko:K02004 M00258 ko00000,ko00002,ko02000 3.A.1 Bacteria 1TQC9@1239,3F3YU@33958,4HB8D@91061,COG1136@1,COG1136@2 NA|NA|NA V ABC transporter, ATP-binding protein HOOMBAJD_00406 568703.LGG_00131 0.0 1547.3 Lactobacillaceae ylbB ko:K02004,ko:K06994 M00258 ko00000,ko00002,ko02000 3.A.1 Bacteria 1TPHU@1239,3F4HF@33958,4HA2C@91061,COG0577@1,COG0577@2,COG1511@1,COG1511@2 NA|NA|NA V ABC transporter permease HOOMBAJD_00407 568703.LGG_00132 1.3e-204 718.8 Lactobacillaceae 4.1.1.52 ko:K22213 ko00000,ko01000 Bacteria 1TRAY@1239,3F485@33958,4HFH2@91061,COG2159@1,COG2159@2 NA|NA|NA S Amidohydrolase HOOMBAJD_00408 568703.LGG_00133 4.9e-251 873.2 Lactobacillaceae purA GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046033,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.4 ko:K01939 ko00230,ko00250,ko01100,map00230,map00250,map01100 M00049 R01135 RC00458,RC00459 ko00000,ko00001,ko00002,ko01000 Bacteria 1TQ4C@1239,3F3RQ@33958,4H9YT@91061,COG0104@1,COG0104@2 NA|NA|NA F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP HOOMBAJD_00410 568703.LGG_00135 0.0 1175.6 Lactobacillaceae cadA GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 3.6.3.3,3.6.3.5 ko:K01534,ko:K12951,ko:K21887 ko00000,ko01000 3.A.3,3.A.3.6 Bacteria 1TQ07@1239,3F4T3@33958,4H9SP@91061,COG2217@1,COG2217@2 NA|NA|NA P P-type ATPase HOOMBAJD_00411 568703.LGG_00136 6e-55 219.9 Lactobacillaceae nmtR GO:0008150,GO:0010565,GO:0019216,GO:0019217,GO:0019222,GO:0031323,GO:0050789,GO:0050794,GO:0062012,GO:0065007,GO:0080090 ko:K21886,ko:K21903,ko:K22298 ko00000,ko03000 Bacteria 1VA6G@1239,3FB53@33958,4HFYU@91061,COG0640@1,COG0640@2 NA|NA|NA K helix_turn_helix, Arsenical Resistance Operon Repressor HOOMBAJD_00413 568703.LGG_00137 8e-16 88.6 Lactobacillaceae yxaM Bacteria 1UZKT@1239,3F4QJ@33958,4HDHS@91061,COG0477@1,COG2814@2 NA|NA|NA EGP Major facilitator Superfamily HOOMBAJD_00414 568703.LGG_00137 2.4e-179 634.8 Lactobacillaceae yxaM Bacteria 1UZKT@1239,3F4QJ@33958,4HDHS@91061,COG0477@1,COG2814@2 NA|NA|NA EGP Major facilitator Superfamily HOOMBAJD_00415 543734.LCABL_01180 1.6e-152 545.8 Lactobacillaceae Bacteria 1TNYC@1239,3F58D@33958,4HF5V@91061,COG1476@1,COG1476@2 NA|NA|NA K Helix-turn-helix XRE-family like proteins HOOMBAJD_00416 543734.LCABL_01190 5.7e-27 126.3 Lactobacillaceae Bacteria 1VF37@1239,2E3AZ@1,32YAF@2,3F8CH@33958,4HP14@91061 NA|NA|NA S Phospholipase_D-nuclease N-terminal HOOMBAJD_00417 543734.LCABL_01200 1.2e-121 443.0 Lactobacillaceae yxlF ko:K01990 M00254 ko00000,ko00002,ko02000 3.A.1 Bacteria 1TQEV@1239,3F612@33958,4HBHF@91061,COG1131@1,COG1131@2 NA|NA|NA V ABC transporter HOOMBAJD_00418 543734.LCABL_01210 3.4e-103 381.3 Lactobacillaceae ko:K01992,ko:K19341 ko02010,map02010 M00254,M00762 ko00000,ko00001,ko00002,ko02000 3.A.1,3.A.1.132.2 Bacteria 1UYUR@1239,3F5JZ@33958,4HIS1@91061,COG1277@1,COG1277@2 NA|NA|NA S COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component HOOMBAJD_00419 568703.LGG_00138 0.0 1493.8 Lactobacillaceae nrdD GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008270,GO:0008998,GO:0009058,GO:0009117,GO:0009165,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0015949,GO:0016491,GO:0016725,GO:0016728,GO:0017076,GO:0018130,GO:0019001,GO:0019103,GO:0019438,GO:0019637,GO:0019692,GO:0030554,GO:0031250,GO:0032552,GO:0032553,GO:0032554,GO:0032555,GO:0032556,GO:0032558,GO:0032559,GO:0032560,GO:0032564,GO:0032567,GO:0032991,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046385,GO:0046483,GO:0046872,GO:0046914,GO:0051065,GO:0055086,GO:0055114,GO:0071704,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901576 1.1.98.6 ko:K21636 ko00230,ko00240,ko01100,map00230,map00240,map01100 M00053 R11633,R11634,R11635,R11636 RC00613 ko00000,ko00001,ko00002,ko01000 iECIAI39_1322.ECIAI39_4713,iPC815.YPO3454 Bacteria 1TR9K@1239,3F435@33958,4HBIY@91061,COG1328@1,COG1328@2 NA|NA|NA F Ribonucleoside-triphosphate reductase HOOMBAJD_00420 568703.LGG_00139 2.4e-127 461.5 Lactobacillaceae Bacteria 1VPN2@1239,2E7NX@1,33B9D@2,3F7ZV@33958,4HS0V@91061 NA|NA|NA HOOMBAJD_00421 568703.LGG_00142 1.1e-121 443.0 Lactobacillaceae Bacteria 1V6QF@1239,3F7M5@33958,4HIIT@91061,COG1476@1,COG1476@2 NA|NA|NA K Bacteriophage CI repressor helix-turn-helix domain HOOMBAJD_00422 568703.LGG_00145 6.9e-181 639.8 Lactobacillaceae yveB 2.7.4.29 ko:K19803 R11186 RC00002 ko00000,ko01000,ko01005 Bacteria 1V7AD@1239,3F4Q4@33958,4HJB7@91061,COG0671@1,COG0671@2 NA|NA|NA I PAP2 superfamily HOOMBAJD_00423 568703.LGG_00146 2.5e-208 731.1 Lactobacillaceae mccF Bacteria 1TRBB@1239,3F3NK@33958,4HDUZ@91061,COG1619@1,COG1619@2 NA|NA|NA V LD-carboxypeptidase HOOMBAJD_00424 568703.LGG_00147 7.3e-42 176.0 Lactobacillaceae Bacteria 1U7ZU@1239,29QF0@1,30BEB@2,3FAD7@33958,4IHX8@91061 NA|NA|NA HOOMBAJD_00425 568703.LGG_00148 1.1e-206 725.7 Lactobacillaceae ddl 6.3.2.4 ko:K01921 ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502 R01150 RC00064,RC00141 ko00000,ko00001,ko01000,ko01011 Bacteria 1TP2Y@1239,3F41Z@33958,4H9KB@91061,COG1181@1,COG1181@2 NA|NA|NA F Belongs to the D-alanine--D-alanine ligase family HOOMBAJD_00426 568703.LGG_00149 1.1e-40 172.2 Bacilli Bacteria 1W3JW@1239,296ET@1,2ZTQF@2,4I0TZ@91061 NA|NA|NA HOOMBAJD_00427 568703.LGG_00150 1e-111 409.5 Lactobacillaceae Bacteria 1U78T@1239,29PZE@1,30AXV@2,3F94M@33958,4HYEX@91061 NA|NA|NA HOOMBAJD_00428 568703.LGG_00151 3.3e-224 784.3 Lactobacillaceae Bacteria 1TPRN@1239,3F5J1@33958,4HTQ7@91061,COG0477@1,COG2814@2 NA|NA|NA EGP Major facilitator Superfamily HOOMBAJD_00429 568703.LGG_00154 5.7e-86 323.6 Lactobacillaceae Bacteria 1V3WQ@1239,28PR5@1,2ZCD3@2,3F7UK@33958,4HN4C@91061 NA|NA|NA HOOMBAJD_00430 568703.LGG_00155 7.7e-202 709.5 Lactobacillaceae Bacteria 1V10X@1239,3F3Z4@33958,4H9UD@91061,COG0642@1,COG2205@2 NA|NA|NA T PhoQ Sensor HOOMBAJD_00431 568703.LGG_00156 1.6e-120 438.7 Lactobacillaceae Bacteria 1TSWT@1239,3FC96@33958,4HGB5@91061,COG0745@1,COG0745@2 NA|NA|NA K Transcriptional regulatory protein, C terminal HOOMBAJD_00432 568703.LGG_00157 8.2e-90 336.3 Lactobacillaceae ogt 2.1.1.63 ko:K00567,ko:K10778,ko:K13531 ko00000,ko01000,ko03000,ko03400 Bacteria 1VA03@1239,3F6RF@33958,4HETA@91061,COG0350@1,COG0350@2 NA|NA|NA L Methyltransferase HOOMBAJD_00433 568703.LGG_00158 3.1e-192 677.6 Lactobacillaceae ldhD3 1.1.1.28 ko:K03778 ko00620,ko01120,map00620,map01120 R00704 RC00044 ko00000,ko00001,ko01000 Bacteria 1TSZ6@1239,3F4US@33958,4HCIS@91061,COG1052@1,COG1052@2 NA|NA|NA CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family HOOMBAJD_00434 568703.LGG_00159 1e-48 199.1 Lactobacillaceae 2.7.1.196,2.7.1.205 ko:K02760 ko00500,ko02060,map00500,map02060 M00275 R11170,R11172 RC00017,RC03206 ko00000,ko00001,ko00002,ko01000,ko02000 4.A.3.2 Bacteria 1VADE@1239,3F7XZ@33958,4HKG9@91061,COG1440@1,COG1440@2 NA|NA|NA G PTS system, Lactose/Cellobiose specific IIB subunit HOOMBAJD_00435 568703.LGG_00160 1e-51 209.1 Lactobacillaceae chbA GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006810,GO:0008150,GO:0008643,GO:0009401,GO:0009987,GO:0015144,GO:0016043,GO:0016740,GO:0016772,GO:0016773,GO:0022607,GO:0022804,GO:0022857,GO:0034219,GO:0043933,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0051179,GO:0051234,GO:0051259,GO:0051260,GO:0055085,GO:0065003,GO:0071702,GO:0071840,GO:0090563,GO:0090566,GO:1901264,GO:1902815 2.7.1.196,2.7.1.205 ko:K02759 ko00500,ko02060,map00500,map02060 M00275 R11170,R11172 RC00017,RC03206 ko00000,ko00001,ko00002,ko01000,ko02000 4.A.3.2 iECABU_c1320.ECABU_c17610,iECOK1_1307.ECOK1_1683,iECUMN_1333.ECUMN_2025,iNRG857_1313.NRG857_07575,iUMN146_1321.UM146_09345 Bacteria 1VEGE@1239,3FA2W@33958,4HM37@91061,COG1447@1,COG1447@2 NA|NA|NA G PTS system, Lactose/Cellobiose specific IIA subunit HOOMBAJD_00436 568703.LGG_00161 1e-84 319.3 Lactobacillaceae Bacteria 1VE22@1239,2E5MG@1,330CD@2,3FBP1@33958,4IRFH@91061 NA|NA|NA HOOMBAJD_00437 568703.LGG_00162 7.2e-253 879.4 Lactobacillaceae celD 2.7.1.207 ko:K02761,ko:K02787,ko:K02788 ko00052,ko00500,ko01100,ko02060,map00052,map00500,map01100,map02060 M00275,M00281 R04393,R11170,R11172 RC00017,RC03206 ko00000,ko00001,ko00002,ko01000,ko02000 4.A.3.1,4.A.3.2 Bacteria 1TP8D@1239,3FC70@33958,4HDVN@91061,COG1455@1,COG1455@2 NA|NA|NA G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane HOOMBAJD_00438 568703.LGG_00163 1e-289 1001.9 Lactobacillaceae celA 3.2.1.86 ko:K01223 ko00010,ko00500,map00010,map00500 R00839,R05133,R05134 RC00049,RC00171,RC00714 ko00000,ko00001,ko01000 GT1 Bacteria 1TP19@1239,3F3PQ@33958,4HA1W@91061,COG2723@1,COG2723@2 NA|NA|NA G Belongs to the glycosyl hydrolase 1 family HOOMBAJD_00439 568703.LGG_00164 1.1e-130 472.6 Lactobacillaceae GO:0005575,GO:0005623,GO:0009279,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044462,GO:0044464,GO:0071944 ko:K03489 ko00000,ko03000 Bacteria 1V4DC@1239,3F6TC@33958,4HIDU@91061,COG2188@1,COG2188@2 NA|NA|NA K UTRA HOOMBAJD_00440 568703.LGG_00165 1.3e-42 178.7 Firmicutes Bacteria 1W538@1239,298HG@1,2ZKVW@2 NA|NA|NA HOOMBAJD_00441 568703.LGG_00166 4.4e-56 223.8 Lactobacillaceae ypaA ko:K08987 ko00000 Bacteria 1VAVU@1239,3F7NA@33958,4HQHN@91061,COG3759@1,COG3759@2 NA|NA|NA S Protein of unknown function (DUF1304) HOOMBAJD_00442 568703.LGG_00167 3e-54 217.6 Lactobacillaceae Bacteria 1VPXU@1239,2EGA1@1,33A1U@2,3F7WK@33958,4HS3Y@91061 NA|NA|NA S Protein of unknown function (DUF1516) HOOMBAJD_00443 568703.LGG_00168 1.4e-254 885.2 Lactobacillaceae pbuO ko:K06901 ko00000,ko02000 2.A.1.40 Bacteria 1TQC6@1239,3F44D@33958,4HANG@91061,COG2252@1,COG2252@2 NA|NA|NA S permease HOOMBAJD_00444 568703.LGG_00169 3.1e-53 214.2 Lactobacillaceae ko:K09004 ko00000 Bacteria 1VEYT@1239,3FBBQ@33958,4HQQN@91061,COG1416@1,COG1416@2 NA|NA|NA S DsrE/DsrF-like family HOOMBAJD_00447 568703.LGG_00172 7.1e-138 496.5 Lactobacillaceae tauB GO:0003674,GO:0003824,GO:0005215,GO:0005342,GO:0005368,GO:0006810,GO:0006811,GO:0006820,GO:0006855,GO:0008150,GO:0008509,GO:0008514,GO:0008559,GO:0015075,GO:0015238,GO:0015399,GO:0015405,GO:0015411,GO:0015711,GO:0015734,GO:0015849,GO:0015893,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0033283,GO:0034220,GO:0042221,GO:0042493,GO:0042623,GO:0042626,GO:0042908,GO:0042910,GO:0043492,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0072348,GO:0098656,GO:1901682,GO:1903825 3.6.3.36 ko:K02049,ko:K10831 ko00920,ko02010,map00920,map02010 M00188,M00435 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.16,3.A.1.17,3.A.1.17.1,3.A.1.17.4 Bacteria 1TRM6@1239,3FC3F@33958,4HBZ6@91061,COG1116@1,COG1116@2 NA|NA|NA P ATPases associated with a variety of cellular activities HOOMBAJD_00448 568703.LGG_00173 7.4e-183 646.4 Bacilli tauA GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0006810,GO:0006811,GO:0006820,GO:0006950,GO:0007154,GO:0008150,GO:0009267,GO:0009605,GO:0009970,GO:0009987,GO:0009991,GO:0015711,GO:0015734,GO:0015849,GO:0030288,GO:0030313,GO:0031667,GO:0031668,GO:0031669,GO:0031975,GO:0033554,GO:0042594,GO:0042597,GO:0042908,GO:0044464,GO:0050896,GO:0051179,GO:0051234,GO:0051716,GO:0071496,GO:0071702,GO:0071705,GO:0072348 ko:K15551 ko00920,ko02010,map00920,map02010 M00435 ko00000,ko00001,ko00002,ko02000 3.A.1.17.1,3.A.1.17.4 iECOK1_1307.ECOK1_0347,iECS88_1305.ECS88_0362,iUMN146_1321.UM146_15535 Bacteria 1TSJU@1239,4HFCZ@91061,COG4521@1,COG4521@2 NA|NA|NA P NMT1-like family HOOMBAJD_00449 568703.LGG_00174 1.1e-141 509.2 Lactobacillaceae tauC ko:K15552 ko00920,ko02010,map00920,map02010 M00435 ko00000,ko00001,ko00002,ko02000 3.A.1.17.1,3.A.1.17.4 Bacteria 1U217@1239,3FBIE@33958,4HCS9@91061,COG0600@1,COG0600@2 NA|NA|NA P Binding-protein-dependent transport system inner membrane component HOOMBAJD_00450 568703.LGG_00175 0.0 1112.8 Lactobacillaceae naoX Bacteria 1TPWW@1239,3FBSF@33958,4HA11@91061,COG0446@1,COG0446@2,COG0607@1,COG0607@2 NA|NA|NA P Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain HOOMBAJD_00451 568703.LGG_00176 3.6e-257 893.6 Lactobacillaceae ko:K07112 ko00000 Bacteria 1TSNG@1239,3F7RB@33958,4HCH9@91061,COG2391@1,COG2391@2 NA|NA|NA S Sulphur transport HOOMBAJD_00452 568703.LGG_00177 2.1e-112 412.1 Lactobacillaceae Bacteria 1U35Y@1239,3FBI9@33958,4HCXK@91061,COG0583@1,COG0583@2 NA|NA|NA K LysR substrate binding domain HOOMBAJD_00453 568703.LGG_00178 1.2e-185 655.6 Lactobacillaceae mhqA 3.4.21.26 ko:K01322,ko:K15975 ko04614,map04614 ko00000,ko00001,ko01000,ko01002 Bacteria 1TP7I@1239,3F4PB@33958,4H9ND@91061,COG0346@1,COG0346@2 NA|NA|NA E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HOOMBAJD_00454 568703.LGG_00179 7e-38 162.9 Lactobacillaceae Bacteria 1U7RE@1239,29Q9W@1,30B8Z@2,3FA2D@33958,4IHNS@91061 NA|NA|NA HOOMBAJD_00455 568703.LGG_00180 2.1e-105 388.3 Lactobacillaceae yoaA 2.3.1.128 ko:K03790 ko00000,ko01000,ko03009 Bacteria 1VCN3@1239,3F7GP@33958,4HKNF@91061,COG1670@1,COG1670@2 NA|NA|NA J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins HOOMBAJD_00456 568703.LGG_00181 0.0 1107.0 Lactobacillaceae Bacteria 1VXAH@1239,2F70X@1,33ZGK@2,3F9HI@33958,4HXTD@91061 NA|NA|NA HOOMBAJD_00458 568703.LGG_00183 1.7e-121 442.2 Lactobacillaceae yqcC Bacteria 1V53P@1239,2DKUU@1,30E2P@2,3FBA0@33958,4HMV7@91061 NA|NA|NA S WxL domain surface cell wall-binding HOOMBAJD_00459 568703.LGG_00184 1.1e-184 652.5 Lactobacillaceae ynjC Bacteria 1VCXS@1239,3F5HA@33958,4HKJG@91061,COG4072@1,COG4072@2 NA|NA|NA S Cell surface protein HOOMBAJD_00460 568703.LGG_00186 2.7e-269 934.1 Lactobacillaceae ko:K02538 ko00000,ko03000 Bacteria 1VBUE@1239,3FBAD@33958,4HN8V@91061,COG3711@1,COG3711@2 NA|NA|NA L Mga helix-turn-helix domain HOOMBAJD_00461 568703.LGG_00187 1.8e-149 535.4 Lactobacillaceae yhaI Bacteria 1VP5A@1239,3F6XM@33958,4IFSK@91061,COG3152@1,COG3152@2 NA|NA|NA S Protein of unknown function (DUF805) HOOMBAJD_00462 568703.LGG_00188 2.1e-57 228.0 Lactobacillaceae Bacteria 1U6JW@1239,2C1B3@1,302T3@2,3F821@33958,4IGCF@91061 NA|NA|NA HOOMBAJD_00463 568703.LGG_00189 1e-251 875.5 Lactobacillaceae rarA ko:K07478 ko00000 Bacteria 1TPVV@1239,3F3NB@33958,4HAIS@91061,COG2256@1,COG2256@2 NA|NA|NA L recombination factor protein RarA HOOMBAJD_00464 568703.LGG_00190 5.4e-220 770.0 Lactobacillaceae ackA GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.7.2.1 ko:K00925 ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200 M00357,M00579 R00315,R01353 RC00002,RC00043 ko00000,ko00001,ko00002,ko01000 iNJ661.Rv0409 Bacteria 1TQ22@1239,3F48Z@33958,4HA7K@91061,COG0282@1,COG0282@2 NA|NA|NA F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction HOOMBAJD_00465 568703.LGG_00191 3.2e-133 481.1 Lactobacillaceae Bacteria 1TSV7@1239,3F8GM@33958,4HD91@91061,COG1349@1,COG1349@2 NA|NA|NA K DeoR C terminal sensor domain HOOMBAJD_00466 568703.LGG_00192 6e-285 986.1 Lactobacillaceae 2.7.1.12,2.7.1.17,2.7.1.5 ko:K00848,ko:K00851,ko:K00854 ko00030,ko00040,ko00051,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00040,map00051,map01100,map01110,map01120,map01130,map01200 M00014 R01639,R01737,R01902,R03014 RC00002,RC00017,RC00538 ko00000,ko00001,ko00002,ko01000 Bacteria 1UYIG@1239,3F9C6@33958,4HUWR@91061,COG1070@1,COG1070@2 NA|NA|NA G FGGY family of carbohydrate kinases, C-terminal domain HOOMBAJD_00467 568703.LGG_00193 6.4e-162 576.6 Lactobacillaceae 4.1.2.13 ko:K01624 ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230 M00001,M00003,M00165,M00167,M00344,M00345 R01068,R01070,R01829,R02568 RC00438,RC00439,RC00603,RC00604 ko00000,ko00001,ko00002,ko01000 Bacteria 1TQ01@1239,3F64U@33958,4IQQT@91061,COG0191@1,COG0191@2 NA|NA|NA G Fructose-bisphosphate aldolase class-II HOOMBAJD_00468 568703.LGG_00194 7.3e-242 842.8 Lactobacillaceae sgaT 2.7.1.194 ko:K02822,ko:K03475 ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060 M00283,M00550 R07671 RC00017,RC03206 ko00000,ko00001,ko00002,ko01000,ko02000 4.A.7.1 Bacteria 1TQK5@1239,3F4Y4@33958,4HBAD@91061,COG3037@1,COG3037@2 NA|NA|NA S PTS system sugar-specific permease component HOOMBAJD_00469 568703.LGG_00195 6.7e-161 573.2 Lactobacillaceae pphA 3.1.3.16 ko:K01090,ko:K07313 ko00000,ko01000 Bacteria 1V1HN@1239,3FCCD@33958,4HHQ3@91061,COG0639@1,COG0639@2 NA|NA|NA T Calcineurin-like phosphoesterase superfamily domain HOOMBAJD_00470 568703.LGG_00196 1.4e-138 498.8 Lactobacillaceae magIII ko:K07457 ko00000 Bacteria 1V4SG@1239,3F62T@33958,4HI5U@91061,COG2231@1,COG2231@2 NA|NA|NA L Base excision DNA repair protein, HhH-GPD family HOOMBAJD_00471 568703.LGG_00197 2.6e-253 880.9 Lactobacillaceae bmr3 Bacteria 1VSW8@1239,3F4AW@33958,4HUQC@91061,COG0477@1,COG2814@2 NA|NA|NA EGP Major facilitator Superfamily HOOMBAJD_00472 568703.LGG_00198 2.6e-16 90.9 Lactobacillaceae Bacteria 1U8BI@1239,29QMR@1,30BMD@2,3FASZ@33958,4II9I@91061 NA|NA|NA HOOMBAJD_00474 568703.LGG_00200 0.0 1650.6 Lactobacillaceae xfp 4.1.2.22,4.1.2.9 ko:K01621 ko00030,ko00710,ko01100,ko01120,map00030,map00710,map01100,map01120 R00761,R01621 RC00032,RC00226 ko00000,ko00001,ko01000 Bacteria 1TR23@1239,3F3TZ@33958,4HC2J@91061,COG3957@1,COG3957@2 NA|NA|NA G Phosphoketolase HOOMBAJD_00475 568703.LGG_00201 1.8e-303 1047.7 Lactobacillaceae oppA ko:K02035,ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 M00239,M00439 ko00000,ko00001,ko00002,ko02000 3.A.1.5,3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25 Bacteria 1TNYQ@1239,3F3JE@33958,4HAMK@91061,COG4166@1,COG4166@2 NA|NA|NA E ABC transporter, substratebinding protein HOOMBAJD_00476 1423816.BACQ01000030_gene1065 6.1e-77 294.3 Lactobacillaceae Bacteria 1TZIV@1239,2BFQS@1,329JG@2,3F8FT@33958,4IGKR@91061 NA|NA|NA HOOMBAJD_00477 568703.LGG_00203 6.2e-115 420.2 Lactobacillaceae Bacteria 1U7P7@1239,2AHJ7@1,317WU@2,3F9Z1@33958,4IHKH@91061 NA|NA|NA HOOMBAJD_00478 568703.LGG_00204 6.7e-120 436.8 Lactobacillaceae Bacteria 1U7B5@1239,29Q10@1,30AZH@2,3F994@33958,4IH65@91061 NA|NA|NA HOOMBAJD_00479 568703.LGG_00205 2.2e-117 428.3 Lactobacillaceae ko:K01990 M00254 ko00000,ko00002,ko02000 3.A.1 Bacteria 1V1P4@1239,3FC3S@33958,4HDRD@91061,COG1131@1,COG1131@2 NA|NA|NA V ATPases associated with a variety of cellular activities HOOMBAJD_00480 568703.LGG_00206 4.2e-75 287.3 Lactobacillaceae Bacteria 1U7QJ@1239,29Q9A@1,30B8E@2,3FA0T@33958,4IHMW@91061 NA|NA|NA HOOMBAJD_00481 568703.LGG_00207 7.3e-80 303.1 Lactobacillaceae Bacteria 1W1ZW@1239,2BFZ1@1,329UX@2,3F9QT@33958,4I0E0@91061 NA|NA|NA S NUDIX domain HOOMBAJD_00482 568703.LGG_00208 1.8e-212 745.0 Lactobacillaceae Bacteria 1UPQ9@1239,3FC0K@33958,4IV8X@91061,COG1537@1,COG1537@2 NA|NA|NA S nuclear-transcribed mRNA catabolic process, no-go decay HOOMBAJD_00483 568703.LGG_00209 3.5e-283 980.3 Lactobacillaceae ko:K06147,ko:K06148 ko00000,ko02000 3.A.1,3.A.1.106,3.A.1.109,3.A.1.21 Bacteria 1TSRV@1239,3F6VM@33958,4HCIZ@91061,COG1132@1,COG1132@2 NA|NA|NA V ABC transporter transmembrane region HOOMBAJD_00484 568703.LGG_00210 1.3e-162 578.9 Lactobacillaceae gadR Bacteria 1UZI0@1239,3F8VZ@33958,4HC2C@91061,COG1396@1,COG1396@2 NA|NA|NA K Transcriptional activator, Rgg GadR MutR family HOOMBAJD_00485 568703.LGG_00211 0.0 1240.3 Lactobacillaceae fnq20 1.13.12.16 ko:K00459 ko00910,map00910 R00025 RC02541,RC02759 ko00000,ko00001,ko01000 Bacteria 1UZ38@1239,3F4ZH@33958,4HDXC@91061,COG4529@1,COG4529@2 NA|NA|NA S FAD-NAD(P)-binding HOOMBAJD_00487 568703.LGG_01141 2.5e-46 191.0 Lactobacillaceae Bacteria 1U69U@1239,2C26M@1,30A6X@2,3F7E8@33958,4IG11@91061 NA|NA|NA HOOMBAJD_00488 543734.LCABL_10000 6.9e-48 196.8 Lactobacillaceae hol Bacteria 1VGGV@1239,3F9QK@33958,4HPNN@91061,COG5546@1,COG5546@2 NA|NA|NA S Bacteriophage holin HOOMBAJD_00490 543734.LCABL_10020 4e-197 693.7 Bacilli Bacteria 1VT9V@1239,4HV77@91061,COG0791@1,COG0791@2 NA|NA|NA M Bacteriophage peptidoglycan hydrolase HOOMBAJD_00491 1291743.LOSG293_110040 1.4e-23 116.7 Bacteria doc ko:K07341 ko00000,ko02048 Bacteria COG3654@1,COG3654@2 NA|NA|NA HOOMBAJD_00493 1423732.BALS01000070_gene2075 1.9e-92 346.3 Lactobacillaceae Bacteria 1VJ2V@1239,3F4UK@33958,4HPCG@91061,COG0582@1,COG0582@2 NA|NA|NA L Belongs to the 'phage' integrase family HOOMBAJD_00494 1408823.AXUS01000024_gene2727 8.6e-13 80.5 Clostridia Bacteria 1W77S@1239,24WVB@186801,2DIEN@1,30306@2 NA|NA|NA S Short C-terminal domain HOOMBAJD_00495 1423732.BALS01000070_gene2074 3.1e-45 188.0 Bacilli Bacteria 1W1K0@1239,4I17Z@91061,COG2856@1,COG2856@2 NA|NA|NA E Zn peptidase HOOMBAJD_00496 568703.LGG_01095 7.2e-26 123.2 Lactobacillaceae 3.4.21.88 ko:K01356 M00729 ko00000,ko00002,ko01000,ko01002,ko03400 Bacteria 1VK84@1239,3F85V@33958,4HRBT@91061,COG1396@1,COG1396@2 NA|NA|NA K Helix-turn-helix domain HOOMBAJD_00498 220668.lp_0637 5.9e-20 104.4 Lactobacillaceae Bacteria 1U6II@1239,2C8QA@1,30ADW@2,3F7ZD@33958,4IGAW@91061 NA|NA|NA HOOMBAJD_00501 1158607.UAU_01715 2.7e-61 243.0 Enterococcaceae Bacteria 1TQY7@1239,4AZDG@81852,4HCRF@91061,COG1196@1,COG1196@2 NA|NA|NA D nuclear chromosome segregation HOOMBAJD_00502 1540257.JQMW01000013_gene763 2.6e-30 138.3 Clostridiaceae Bacteria 1TQY7@1239,248AP@186801,36FNI@31979,COG1196@1,COG1196@2 NA|NA|NA D nuclear chromosome segregation HOOMBAJD_00503 1234679.BN424_1880 1.1e-48 199.9 Carnobacteriaceae Bacteria 1V0ZR@1239,27H5N@186828,28KUF@1,2ZAB9@2,4HDY0@91061 NA|NA|NA HOOMBAJD_00504 1449338.JQLU01000005_gene3745 4e-22 111.3 Bacilli Bacteria 1V0ZR@1239,28KUF@1,2ZAB9@2,4HDY0@91061 NA|NA|NA HOOMBAJD_00505 1158607.UAU_01719 3.3e-55 221.9 Enterococcaceae Bacteria 1TSJF@1239,4B12F@81852,4HB1R@91061,COG1235@1,COG1235@2 NA|NA|NA S Beta-lactamase superfamily domain HOOMBAJD_00506 1291743.LOSG293_110610 4.7e-17 94.7 Lactobacillaceae 3.6.4.12 ko:K03654 ko03018,map03018 ko00000,ko00001,ko01000,ko03400 Bacteria 1U807@1239,3FADK@33958,4IHXK@91061,COG2852@1,COG2852@2 NA|NA|NA S Protein of unknown function (DUF559) HOOMBAJD_00507 1231336.L248_2122 5.9e-83 314.3 Lactobacillaceae Bacteria 1U6IF@1239,3F7Z7@33958,4IGAS@91061,COG3935@1,COG3935@2 NA|NA|NA L DnaD domain protein HOOMBAJD_00509 543734.LCABL_13080 9.2e-65 252.7 Lactobacillaceae Bacteria 1UPTI@1239,2DPTB@1,333AH@2,3FAGC@33958,4HSWB@91061 NA|NA|NA S Hypothetical protein (DUF2513) HOOMBAJD_00513 1234679.BN424_1875 7.3e-99 367.1 Bacilli 2.1.1.72 ko:K06223 ko03430,map03430 ko00000,ko00001,ko01000,ko02048,ko03032,ko03400 Bacteria 1UBIY@1239,4HDX1@91061,COG0338@1,COG0338@2 NA|NA|NA L D12 class N6 adenine-specific DNA methyltransferase HOOMBAJD_00521 279281.Q6J1V2_9CAUD 8.1e-50 203.0 Siphoviridae Viruses 4QN19@10699,4QQW9@28883,4QZQH@35237 NA|NA|NA S Protein of unknown function (DUF1064) HOOMBAJD_00522 1231336.L248_2125 1.4e-21 109.4 Bacilli Bacteria 1W27S@1239,2DQDJ@1,3364C@2,4HZSX@91061 NA|NA|NA HOOMBAJD_00524 768486.EHR_00690 2.1e-25 122.1 Enterococcaceae Bacteria 1W51N@1239,2DCNS@1,2ZESF@2,4B6K8@81852,4I1NU@91061 NA|NA|NA HOOMBAJD_00527 762550.LEGAS_0827 1.1e-10 73.9 Bacilli Bacteria 1VKQ1@1239,2EG6Z@1,339YV@2,4HSCJ@91061 NA|NA|NA HOOMBAJD_00528 1158601.I585_01162 4.8e-17 94.7 Bacteria ko:K07474 ko00000 Bacteria COG3728@1,COG3728@2 NA|NA|NA L DNA packaging HOOMBAJD_00529 1300150.EMQU_2501 6.5e-126 457.6 Enterococcaceae ko:K06909 ko00000 Bacteria 1TRQP@1239,4B0JB@81852,4HCUQ@91061,COG1783@1,COG1783@2 NA|NA|NA S Terminase RNAseH like domain HOOMBAJD_00530 764291.STRUR_2107 4.1e-100 372.1 Bacilli Bacteria 1UYMH@1239,2BX0Z@1,2Z88Q@2,4HC7J@91061 NA|NA|NA S portal protein HOOMBAJD_00531 1104325.M7W_1353 1.4e-71 277.3 Enterococcaceae Bacteria 1UZ30@1239,4B5Z0@81852,4HBNN@91061,COG2369@1,COG2369@2 NA|NA|NA S Phage minor capsid protein 2 HOOMBAJD_00534 1280694.AUJQ01000002_gene1760 1.7e-14 84.7 Clostridia Bacteria 1VJ5N@1239,24U9N@186801,2DQKF@1,337FN@2 NA|NA|NA HOOMBAJD_00535 1005705.HMPREF9967_0538 2.4e-36 159.8 Firmicutes Bacteria 1V6D3@1239,COG4640@1,COG4640@2 NA|NA|NA S response to antibiotic HOOMBAJD_00536 904314.SEVCU012_1061 5.9e-37 160.6 Bacilli Bacteria 1VGHA@1239,2E5BJ@1,3303M@2,4HQ41@91061 NA|NA|NA HOOMBAJD_00537 1136177.KCA1_0739 3.3e-35 157.1 Lactobacillaceae Bacteria 1U59T@1239,3F5B3@33958,4IF1C@91061,COG2340@1,COG2340@2 NA|NA|NA S Cysteine-rich secretory protein family HOOMBAJD_00539 936140.AEOT01000001_gene2370 1.6e-23 114.8 Lactobacillaceae WQ51_00220 ko:K07729 ko00000,ko03000 Bacteria 1VERT@1239,3F85E@33958,4HNID@91061,COG1476@1,COG1476@2 NA|NA|NA K Helix-turn-helix XRE-family like proteins HOOMBAJD_00540 568703.LGG_01952 1.1e-114 419.5 Lactobacillaceae zmp3 Bacteria 1V6X9@1239,3F6QI@33958,4HK8S@91061,COG5549@1,COG5549@2 NA|NA|NA O Zinc-dependent metalloprotease HOOMBAJD_00542 568703.LGG_01951 7.5e-114 416.8 Lactobacillaceae 2.7.1.39 ko:K02204 ko00260,ko01100,ko01110,ko01120,ko01230,map00260,map01100,map01110,map01120,map01230 M00018 R01771 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 Bacteria 1VG1G@1239,2DQV2@1,338VR@2,3F9IH@33958,4HQEQ@91061 NA|NA|NA S Phosphotransferase enzyme family HOOMBAJD_00543 568703.LGG_01949 2.5e-68 264.6 Lactobacillaceae Bacteria 1U5KS@1239,2F916@1,309SE@2,3F65Y@33958,4IFBR@91061 NA|NA|NA S Iron-sulphur cluster biosynthesis HOOMBAJD_00544 568703.LGG_01948 1.7e-282 978.0 Lactobacillaceae ko:K06147,ko:K06148,ko:K18889 ko02010,map02010 M00707 ko00000,ko00001,ko00002,ko02000 3.A.1,3.A.1.106,3.A.1.106.13,3.A.1.106.5,3.A.1.109,3.A.1.21 Bacteria 1TP0B@1239,3F4HU@33958,4HA3S@91061,COG1132@1,COG1132@2 NA|NA|NA V ABC transporter transmembrane region HOOMBAJD_00545 568703.LGG_01947 4.6e-08 62.4 Lactobacillaceae ko:K06147,ko:K06148 ko00000,ko02000 3.A.1,3.A.1.106,3.A.1.109,3.A.1.21 Bacteria 1UVV5@1239,3F9E9@33958,4I2V1@91061,COG1132@1,COG1132@2 NA|NA|NA V ABC transporter transmembrane region HOOMBAJD_00546 568703.LGG_01947 3.1e-257 894.0 Lactobacillaceae ko:K06147,ko:K06148 ko00000,ko02000 3.A.1,3.A.1.106,3.A.1.109,3.A.1.21 Bacteria 1UVV5@1239,3F9E9@33958,4I2V1@91061,COG1132@1,COG1132@2 NA|NA|NA V ABC transporter transmembrane region HOOMBAJD_00547 568703.LGG_01946 8.7e-38 162.5 Lactobacillaceae Bacteria 1W6HR@1239,28QAQ@1,2ZCTB@2,3F7NS@33958,4I0FP@91061 NA|NA|NA HOOMBAJD_00549 568703.LGG_01945 0.0 1077.8 Lactobacillaceae ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 M00439 ko00000,ko00001,ko00002,ko02000 3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25 Bacteria 1TNYQ@1239,3F9QE@33958,4HTMF@91061,COG4166@1,COG4166@2 NA|NA|NA E Bacterial extracellular solute-binding proteins, family 5 Middle HOOMBAJD_00550 568703.LGG_01944 3.2e-167 594.3 Lactobacillaceae oppB ko:K02033,ko:K15581 ko01501,ko02010,ko02024,map01501,map02010,map02024 M00239,M00439 ko00000,ko00001,ko00002,ko02000 3.A.1.5,3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25 Bacteria 1TP1S@1239,3F9HF@33958,4HU8D@91061,COG0601@1,COG0601@2 NA|NA|NA P Binding-protein-dependent transport system inner membrane component HOOMBAJD_00551 568703.LGG_01943 9.8e-172 609.4 Lactobacillaceae amiD ko:K02034,ko:K15582 ko01501,ko02010,ko02024,map01501,map02010,map02024 M00239,M00439 ko00000,ko00001,ko00002,ko02000 3.A.1.5,3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25 Bacteria 1TP4R@1239,3F9AC@33958,4HBB9@91061,COG1173@1,COG1173@2 NA|NA|NA P N-terminal TM domain of oligopeptide transport permease C HOOMBAJD_00552 568703.LGG_01942 1.7e-48 198.4 Lactobacillaceae Bacteria 1U7RZ@1239,2AHSP@1,31856@2,3FA3D@33958,4IHPB@91061 NA|NA|NA HOOMBAJD_00553 568703.LGG_01941 5.2e-198 696.8 Lactobacillaceae oppD ko:K02031,ko:K02032,ko:K15583 ko01501,ko02010,ko02024,map01501,map02010,map02024 M00239,M00439 ko00000,ko00001,ko00002,ko02000 3.A.1.5,3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25 Bacteria 1VRIF@1239,3F96N@33958,4HV11@91061,COG0444@1,COG0444@2 NA|NA|NA P Oligopeptide/dipeptide transporter, C-terminal region HOOMBAJD_00554 568703.LGG_01940 3.6e-160 570.9 Lactobacillaceae oppF ko:K02032,ko:K10823 ko01501,ko02010,ko02024,map01501,map02010,map02024 M00239,M00439 ko00000,ko00001,ko00002,ko02000 3.A.1.5,3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25 Bacteria 1V36J@1239,3F9A0@33958,4HUP0@91061,COG4608@1,COG4608@2 NA|NA|NA P Oligopeptide/dipeptide transporter, C-terminal region HOOMBAJD_00555 913848.AELK01000184_gene664 5.3e-21 108.2 Lactobacillaceae Bacteria 1U5IX@1239,29NT4@1,309R6@2,3F624@33958,4HZ1H@91061 NA|NA|NA HOOMBAJD_00556 568703.LGG_01938 4.2e-127 460.7 Lactobacillaceae skfE ko:K01990 M00254 ko00000,ko00002,ko02000 3.A.1 Bacteria 1TPUP@1239,3FC3Q@33958,4HC2V@91061,COG1131@1,COG1131@2 NA|NA|NA V ATPases associated with a variety of cellular activities HOOMBAJD_00557 568703.LGG_01937 3.6e-61 240.7 Lactobacillaceae yvoA_1 ko:K07979 ko00000,ko03000 Bacteria 1VA2B@1239,3F6GC@33958,4HPK4@91061,COG1725@1,COG1725@2 NA|NA|NA K Transcriptional regulator, GntR family HOOMBAJD_00558 568703.LGG_01936 7.4e-163 579.7 Lactobacillaceae Bacteria 1VSYU@1239,3F4J2@33958,4HU15@91061,COG4814@1,COG4814@2 NA|NA|NA S Alpha beta hydrolase HOOMBAJD_00559 568703.LGG_01935 9.2e-184 649.4 Lactobacillaceae ko:K15256 ko00000,ko01000,ko03016 Bacteria 1V7TA@1239,3FCE2@33958,4HWM9@91061,COG1476@1,COG1476@2 NA|NA|NA K Helix-turn-helix domain HOOMBAJD_00560 568703.LGG_01934 6.7e-128 463.4 Lactobacillaceae ko:K07090 ko00000 Bacteria 1V75K@1239,3F6BU@33958,4HEE8@91061,COG0730@1,COG0730@2 NA|NA|NA S membrane transporter protein HOOMBAJD_00561 568703.LGG_01933 7.5e-189 666.4 Lactobacillaceae ypiB ko:K18926 M00715 ko00000,ko00002,ko02000 2.A.1.3.30 Bacteria 1UYQB@1239,3F3NG@33958,4HE3Y@91061,COG0477@1,COG2814@2 NA|NA|NA EGP Major facilitator Superfamily HOOMBAJD_00562 568703.LGG_01933 9.4e-50 202.6 Lactobacillaceae ypiB ko:K18926 M00715 ko00000,ko00002,ko02000 2.A.1.3.30 Bacteria 1UYQB@1239,3F3NG@33958,4HE3Y@91061,COG0477@1,COG2814@2 NA|NA|NA EGP Major facilitator Superfamily HOOMBAJD_00563 568703.LGG_01932 6.8e-113 413.3 Lactobacillaceae ko:K09017 ko00000,ko03000 Bacteria 1VG1F@1239,3F6KD@33958,4HPER@91061,COG1309@1,COG1309@2 NA|NA|NA K Transcriptional regulator HOOMBAJD_00564 568703.LGG_01931 6.7e-282 976.1 Lactobacillaceae ko:K01992 M00254 ko00000,ko00002,ko02000 3.A.1 Bacteria 1TPIG@1239,3F4PV@33958,4H9SK@91061,COG3559@1,COG3559@2 NA|NA|NA M Exporter of polyketide antibiotics HOOMBAJD_00565 568703.LGG_01930 4.7e-163 580.5 Lactobacillaceae yjjC ko:K01990,ko:K01992 M00254 ko00000,ko00002,ko02000 3.A.1 Bacteria 1TQHS@1239,3F4JT@33958,4HC34@91061,COG1131@1,COG1131@2 NA|NA|NA V ABC transporter HOOMBAJD_00566 568703.LGG_01929 3.2e-133 481.1 Lactobacillaceae nfrA 1.5.1.38,1.5.1.39 ko:K19285,ko:K19286 ko00740,ko01100,map00740,map01100 R05705,R05706 RC00126 ko00000,ko00001,ko01000 Bacteria 1UB8S@1239,3F4IY@33958,4HEGP@91061,COG0778@1,COG0778@2 NA|NA|NA C nitroreductase HOOMBAJD_00567 1423816.BACQ01000046_gene1728 4.6e-64 251.5 Lactobacillaceae ORF00048 Bacteria 1V9IF@1239,3F6UB@33958,4HKB8@91061,COG4858@1,COG4858@2 NA|NA|NA HOOMBAJD_00568 568703.LGG_01926 1.8e-56 224.9 Lactobacillaceae ko:K10947 ko00000,ko03000 Bacteria 1VAGB@1239,3F70B@33958,4HKBS@91061,COG1695@1,COG1695@2 NA|NA|NA K Transcriptional regulator PadR-like family HOOMBAJD_00569 568703.LGG_01925 6e-106 390.2 Bacteria 1.5.1.40 ko:K06988 ko00000,ko01000 Bacteria COG2085@1,COG2085@2 NA|NA|NA S NADP oxidoreductase coenzyme F420-dependent HOOMBAJD_00570 568703.LGG_01924 1.8e-87 328.6 Lactobacillaceae ko:K03830 ko00000,ko01000 Bacteria 1UM79@1239,3FBXP@33958,4ITT0@91061,COG0454@1,COG0456@2 NA|NA|NA K Acetyltransferase (GNAT) domain HOOMBAJD_00571 568703.LGG_01923 2.5e-98 364.8 Lactobacillaceae kptA ko:K07559 ko00000,ko01000,ko03016 Bacteria 1V49Y@1239,3FBCQ@33958,4HHHZ@91061,COG1859@1,COG1859@2 NA|NA|NA J Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP- ribose 1''-2''-cyclic phosphate (APPR P). May function as an ADP- ribosylase HOOMBAJD_00572 568703.LGG_01922 1.3e-41 175.3 Lactobacillaceae Bacteria 1VPIM@1239,2ENWC@1,33GHC@2,3F826@33958,4HRIM@91061 NA|NA|NA HOOMBAJD_00573 568703.LGG_01921 2.2e-241 841.3 Lactobacillaceae citM ko:K03300 ko00000 2.A.11 Bacteria 1TQQH@1239,3F5EB@33958,4HAGT@91061,COG2851@1,COG2851@2 NA|NA|NA C Citrate transporter HOOMBAJD_00574 568703.LGG_01920 1.6e-49 201.8 Lactobacillaceae Bacteria 1W0WF@1239,2EDVU@1,337QZ@2,3F82X@33958,4HZEA@91061 NA|NA|NA HOOMBAJD_00575 568703.LGG_01919 3.9e-37 161.0 Lactobacillaceae gcdC 2.3.1.12 ko:K00627,ko:K02160 ko00010,ko00020,ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00010,map00020,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212 M00082,M00307,M00376 R00209,R00742,R02569 RC00004,RC00040,RC00367,RC02742,RC02857 br01601,ko00000,ko00001,ko00002,ko01000 Bacteria 1VW7S@1239,3F7V3@33958,4HJSW@91061,COG0511@1,COG0511@2 NA|NA|NA I Biotin-requiring enzyme HOOMBAJD_00576 568703.LGG_01918 3e-196 691.0 Lactobacillaceae oadB 4.1.1.3 ko:K01572 ko00620,ko01100,map00620,map01100 R00217 RC00040 ko00000,ko00001,ko01000,ko02000 3.B.1.1.1 Bacteria 1TPEP@1239,3F61X@33958,4HEF4@91061,COG1883@1,COG1883@2 NA|NA|NA C Na+-transporting oxaloacetate decarboxylase beta subunit HOOMBAJD_00578 568703.LGG_01917 3.6e-177 627.5 Lactobacillaceae citC 6.2.1.22 ko:K01910 ko02020,map02020 R04449 RC00012,RC00039 ko00000,ko00001,ko01000 Bacteria 1TSGQ@1239,3F4H7@33958,4HC6Q@91061,COG3053@1,COG3053@2 NA|NA|NA H Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase HOOMBAJD_00579 568703.LGG_01916 2.2e-48 198.0 Lactobacillaceae citD GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006091,GO:0006113,GO:0008150,GO:0008152,GO:0008815,GO:0009346,GO:0009987,GO:0015980,GO:0016829,GO:0016830,GO:0016833,GO:0032991,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0055114 ko:K01646 ko02020,map02020 R00362 RC00067,RC01118 ko00000,ko00001 Bacteria 1VEZZ@1239,3F7FR@33958,4HNXD@91061,COG3052@1,COG3052@2 NA|NA|NA C Covalent carrier of the coenzyme of citrate lyase HOOMBAJD_00580 568703.LGG_01915 2.6e-155 554.7 Lactobacillaceae citE 4.1.3.25,4.1.3.34 ko:K01644,ko:K18292 ko00660,ko01100,ko02020,map00660,map01100,map02020 R00237,R00362 RC00067,RC00502,RC01118,RC01205 ko00000,ko00001,ko01000 Bacteria 1TPDY@1239,3F47Q@33958,4HD40@91061,COG2301@1,COG2301@2 NA|NA|NA G Belongs to the HpcH HpaI aldolase family HOOMBAJD_00581 568703.LGG_01914 3.3e-286 990.3 Lactobacillaceae citF GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.8.3.10 ko:K01643 ko02020,map02020 R00362 RC00067,RC01118 ko00000,ko00001,ko01000 iEcSMS35_1347.EcSMS35_0634 Bacteria 1TPN3@1239,3F4EA@33958,4HAE1@91061,COG3051@1,COG3051@2 NA|NA|NA H Citrate (pro-3S)-lyase alpha chain HOOMBAJD_00582 568703.LGG_01913 1.5e-100 372.1 Lactobacillaceae citX 2.4.2.52,2.7.7.61 ko:K05964,ko:K13927 ko02020,map02020 R09675,R10706 RC00049,RC00063 ko00000,ko00001,ko01000 Bacteria 1VB3E@1239,3F74S@33958,4HMZ5@91061,COG3697@1,COG3697@2 NA|NA|NA HI Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase HOOMBAJD_00583 568703.LGG_01912 1.3e-265 921.8 Lactobacillaceae oadA 2.1.3.1,4.1.1.3,6.4.1.1,6.4.1.7 ko:K01571,ko:K01960,ko:K03416,ko:K20140 ko00020,ko00620,ko00640,ko00720,ko01100,ko01120,ko01200,ko01230,map00020,map00620,map00640,map00720,map01100,map01120,map01200,map01230 M00173,M00620 R00217,R00344,R00353,R00930 RC00040,RC00097,RC00367 ko00000,ko00001,ko00002,ko01000,ko02000 3.B.1.1.1 iJN746.PP_5346,iLJ478.TM0128 Bacteria 1VT8P@1239,3F58W@33958,4HBJ1@91061,COG5016@1,COG5016@2 NA|NA|NA C Conserved carboxylase domain HOOMBAJD_00584 568703.LGG_01911 7.2e-124 449.9 Lactobacillaceae citR Bacteria 1TSV2@1239,3F532@33958,4HATG@91061,COG1802@1,COG1802@2 NA|NA|NA K FCD HOOMBAJD_00585 568703.LGG_01910 1e-156 559.3 Lactobacillaceae citG 2.4.2.52,2.7.7.61 ko:K05966,ko:K13927,ko:K13930 ko02020,map02020 R09675,R10706 RC00049,RC00063 ko00000,ko00001,ko01000 Bacteria 1TQGQ@1239,3F4SU@33958,4HGCS@91061,COG1767@1,COG1767@2 NA|NA|NA H 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase HOOMBAJD_00586 568703.LGG_00381 7.9e-46 189.5 Lactobacillaceae Bacteria 1U7PQ@1239,2BNCG@1,319DH@2,3F9ZP@33958,4IHM1@91061 NA|NA|NA HOOMBAJD_00587 568703.LGG_01909 1.9e-68 265.0 Lactobacillaceae Bacteria 1VKJ5@1239,2EIVY@1,33CM8@2,3F7QM@33958,4HRQ2@91061 NA|NA|NA HOOMBAJD_00588 568703.LGG_01908 1.3e-47 196.4 Lactobacillaceae Bacteria 1U7KZ@1239,2AIC8@1,318TE@2,3F9W0@33958,4IHI2@91061 NA|NA|NA HOOMBAJD_00589 568703.LGG_01907 4.4e-157 560.5 Lactobacillaceae Bacteria 1VEC5@1239,3F50A@33958,4HKY6@91061,COG0657@1,COG0657@2 NA|NA|NA I alpha/beta hydrolase fold HOOMBAJD_00590 568703.LGG_01906 7.3e-158 563.1 Lactobacillaceae rluD GO:0000027,GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022607,GO:0022613,GO:0022618,GO:0031118,GO:0034470,GO:0034622,GO:0034641,GO:0034660,GO:0042254,GO:0042255,GO:0042273,GO:0043170,GO:0043412,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:1901360 5.4.99.23,5.4.99.28,5.4.99.29 ko:K06177,ko:K06180 ko00000,ko01000,ko03009,ko03016 iE2348C_1286.E2348C_2868,iECED1_1282.ECED1_3035,iECSF_1327.ECSF_2432 Bacteria 1TS1T@1239,3F46Z@33958,4HBRY@91061,COG0564@1,COG0564@2 NA|NA|NA J Responsible for synthesis of pseudouridine from uracil HOOMBAJD_00591 1423732.BALS01000021_gene323 2e-18 97.4 Bacilli rpmG GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042221,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046677,GO:0050896,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02913 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1VGZK@1239,4HSMA@91061,COG0267@1,COG0267@2 NA|NA|NA J Belongs to the bacterial ribosomal protein bL33 family HOOMBAJD_00592 568703.LGG_01903 1.4e-101 375.6 Lactobacillaceae Bacteria 1U7HI@1239,2BIND@1,32CVF@2,3F9PY@33958,4IHE6@91061 NA|NA|NA HOOMBAJD_00593 568703.LGG_01902 5.9e-191 673.3 Lactobacillaceae Bacteria 1U7B4@1239,3F993@33958,4IH64@91061,COG4072@1,COG4072@2 NA|NA|NA S Bacterial protein of unknown function (DUF916) HOOMBAJD_00594 568703.LGG_01901 1.6e-97 362.5 Lactobacillaceae 2.3.1.128 ko:K03790 ko00000,ko01000,ko03009 Bacteria 1V49W@1239,3F5A6@33958,4HHAP@91061,COG1670@1,COG1670@2 NA|NA|NA J Acetyltransferase (GNAT) domain HOOMBAJD_00595 568703.LGG_01900 1.6e-97 362.1 Lactobacillaceae Bacteria 1UG8K@1239,29V6R@1,30GKF@2,3F5MB@33958,4IF4K@91061 NA|NA|NA HOOMBAJD_00596 568703.LGG_01899 0.0 1098.2 Lactobacillaceae alsS 2.2.1.6 ko:K01652 ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230 M00019,M00570 R00006,R00014,R00226,R03050,R04672,R04673,R08648 RC00027,RC00106,RC01192,RC02744,RC02893 ko00000,ko00001,ko00002,ko01000 Bacteria 1TQE8@1239,3FCE6@33958,4HAV1@91061,COG0028@1,COG0028@2 NA|NA|NA EH Belongs to the TPP enzyme family HOOMBAJD_00597 568703.LGG_01898 5.3e-130 470.3 Lactobacillaceae budA GO:0003674,GO:0003824,GO:0016829,GO:0016830,GO:0016831,GO:0047605 4.1.1.5 ko:K01575 ko00650,ko00660,map00650,map00660 R02948 RC00812 ko00000,ko00001,ko01000 Bacteria 1V4AH@1239,3FCCX@33958,4HJ98@91061,COG3527@1,COG3527@2 NA|NA|NA Q Alpha-acetolactate decarboxylase HOOMBAJD_00599 568703.LGG_01896 3.2e-267 927.2 Lactobacillaceae lysP ko:K03293,ko:K11733 ko00000,ko02000 2.A.3.1,2.A.3.1.2 Bacteria 1UHNR@1239,3F4BG@33958,4HUT7@91061,COG0833@1,COG0833@2 NA|NA|NA E amino acid HOOMBAJD_00600 568703.LGG_01895 1.4e-297 1028.1 Lactobacillaceae frvR GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0018130,GO:0019438,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:1901360,GO:1901362,GO:1901576 ko:K02538,ko:K03483,ko:K09685,ko:K18531 ko00000,ko03000 Bacteria 1VVKT@1239,3F48X@33958,4HWA8@91061,COG3711@1,COG3711@2 NA|NA|NA K Mga helix-turn-helix domain HOOMBAJD_00601 568703.LGG_01894 1.8e-300 1037.7 Lactobacillaceae frvR GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0018130,GO:0019438,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:1901360,GO:1901362,GO:1901576 ko:K02538,ko:K03483,ko:K09685,ko:K18531 ko00000,ko03000 Bacteria 1VVKT@1239,3F5TE@33958,4HWA8@91061,COG3711@1,COG3711@2 NA|NA|NA K Mga helix-turn-helix domain HOOMBAJD_00602 568703.LGG_01893 7.6e-212 743.0 Lactobacillaceae serS GO:0000287,GO:0003674,GO:0003824,GO:0004812,GO:0004828,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006434,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009059,GO:0009069,GO:0009070,GO:0009987,GO:0010467,GO:0016053,GO:0016070,GO:0016259,GO:0016260,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0042802,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046872,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.1.1.11 ko:K01875 ko00970,map00970 M00359,M00360 R03662,R08218 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 iAF987.Gmet_3528,iSDY_1059.SDY_2368 Bacteria 1TP4W@1239,3F3M6@33958,4H9Y4@91061,COG0172@1,COG0172@2 NA|NA|NA J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) HOOMBAJD_00603 1423732.BALS01000026_gene2347 1.3e-14 84.7 Lactobacillaceae Bacteria 1U74I@1239,29PWB@1,30AUN@2,3F8YT@33958,4IGZ5@91061 NA|NA|NA HOOMBAJD_00604 568703.LGG_00675 3.1e-86 324.3 Lactobacillaceae hsp1 ko:K13993 ko04141,map04141 ko00000,ko00001,ko03110 Bacteria 1VG0E@1239,3F7DR@33958,4HPDH@91061,COG0071@1,COG0071@2 NA|NA|NA O Belongs to the small heat shock protein (HSP20) family HOOMBAJD_00605 568703.LGG_00676 6.4e-208 729.9 Lactobacillaceae mutY ko:K03575 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Bacteria 1TPUT@1239,3FCD0@33958,4H9UM@91061,COG1194@1,COG1194@2 NA|NA|NA L A G-specific adenine glycosylase HOOMBAJD_00606 568703.LGG_00677 1.9e-149 535.0 Lactobacillaceae cytC6 Bacteria 1VEC5@1239,3F50A@33958,4HKY6@91061,COG0657@1,COG0657@2 NA|NA|NA I alpha/beta hydrolase fold HOOMBAJD_00607 568703.LGG_00678 8.5e-120 436.4 Lactobacillaceae yrkL ko:K11748 ko00000,ko02000 2.A.37.1.2 Bacteria 1V4UF@1239,3F6XY@33958,4HIR3@91061,COG2249@1,COG2249@2 NA|NA|NA S Flavodoxin-like fold HOOMBAJD_00609 568703.LGG_00680 4.8e-88 330.5 Lactobacillaceae Bacteria 1VK2X@1239,3F7G9@33958,4HQFY@91061,COG3247@1,COG3247@2 NA|NA|NA S Short repeat of unknown function (DUF308) HOOMBAJD_00610 568703.LGG_00681 3e-153 547.7 Lactobacillaceae thiD GO:0008150,GO:0040007 2.5.1.3,2.7.1.49,2.7.4.7,4.1.99.17 ko:K00941,ko:K03147,ko:K21219 ko00730,ko01100,map00730,map01100 M00127 R03223,R03471,R03472,R04509,R10712 RC00002,RC00017,RC00224,RC03251,RC03252,RC03255,RC03397 ko00000,ko00001,ko00002,ko01000 Bacteria 1TQ4A@1239,3F3NA@33958,4HAAH@91061,COG0351@1,COG0351@2 NA|NA|NA H Phosphomethylpyrimidine kinase HOOMBAJD_00611 568703.LGG_00682 1.4e-198 698.7 Lactobacillaceae Bacteria 1U7AN@1239,29Q0Q@1,30AZ6@2,3F980@33958,4IH5M@91061 NA|NA|NA HOOMBAJD_00612 1423814.HMPREF0549_1693 6.6e-07 61.6 Lactobacillaceae Bacteria 1V8SY@1239,2AZ1J@1,31R7P@2,3F4MX@33958,4HJRD@91061 NA|NA|NA HOOMBAJD_00613 568703.LGG_00684 4e-116 424.1 Lactobacillaceae ywnB ko:K07118 ko00000 Bacteria 1U7HS@1239,3F9QF@33958,4IHEE@91061,COG2910@1,COG2910@2 NA|NA|NA S NmrA-like family HOOMBAJD_00615 568703.LGG_00685 0.0 1562.0 Lactobacillaceae bglB 3.2.1.21 ko:K05349 ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110 R00026,R02558,R02887,R02985,R03527,R04949,R04998,R10035,R10039,R10040 RC00049,RC00059,RC00171,RC00262,RC00397,RC00451,RC00714,RC00746,RC01248 ko00000,ko00001,ko01000 GH3 Bacteria 1TP0T@1239,3F43A@33958,4HAAG@91061,COG1472@1,COG1472@2 NA|NA|NA G hydrolase, family 3 HOOMBAJD_00616 568703.LGG_00687 2.3e-165 588.2 Lactobacillaceae XK27_00670 ko:K01989,ko:K05832 M00247 ko00000,ko00002,ko02000 Bacteria 1TPB0@1239,3F4MI@33958,4HESK@91061,COG2984@1,COG2984@2 NA|NA|NA S ABC transporter substrate binding protein HOOMBAJD_00618 568703.LGG_00689 7.6e-164 583.2 Lactobacillaceae XK27_00670 ko:K01989,ko:K05832 M00247 ko00000,ko00002,ko02000 Bacteria 1TPB0@1239,3F462@33958,4HESK@91061,COG2984@1,COG2984@2 NA|NA|NA S ABC transporter HOOMBAJD_00619 568703.LGG_00690 7.6e-156 556.6 Lactobacillaceae WQ51_06230 ko:K01989,ko:K05832 M00247 ko00000,ko00002,ko02000 Bacteria 1TPDJ@1239,3F40J@33958,4HBMY@91061,COG4120@1,COG4120@2 NA|NA|NA U Belongs to the binding-protein-dependent transport system permease family HOOMBAJD_00620 568703.LGG_00691 5.2e-142 510.4 Lactobacillaceae cmpC ko:K05833 M00247 ko00000,ko00002,ko02000 Bacteria 1TPAN@1239,3F3NW@33958,4HCHC@91061,COG1101@1,COG1101@2 NA|NA|NA S ABC transporter, ATP-binding protein HOOMBAJD_00621 568703.LGG_00692 1e-168 599.4 Lactobacillaceae yhfP 1.1.1.1 ko:K00001 ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220 R00623,R00754,R02124,R04805,R04880,R05233,R05234,R06917,R06927,R07105,R08281,R08306,R08310 RC00050,RC00087,RC00088,RC00099,RC00116,RC00649,RC01734,RC02273 ko00000,ko00001,ko01000 Bacteria 1TPGR@1239,3F5R8@33958,4HACF@91061,COG0604@1,COG0604@2 NA|NA|NA C Zinc-binding dehydrogenase HOOMBAJD_00622 568703.LGG_00693 0.0 1639.8 Lactobacillaceae pacL3 3.6.3.8 ko:K01537 ko00000,ko01000 3.A.3.2 Bacteria 1TPF5@1239,3F588@33958,4H9S5@91061,COG0474@1,COG0474@2 NA|NA|NA P Cation transporter/ATPase, N-terminus HOOMBAJD_00623 568703.LGG_00695 1.1e-181 642.5 Lactobacillaceae ykcC ko:K20534 ko00000,ko01000,ko01005,ko02000 4.D.2.1.9 GT2 Bacteria 1TPR3@1239,3F3X7@33958,4HC2Z@91061,COG0463@1,COG0463@2 NA|NA|NA M Glycosyl transferase family 2 HOOMBAJD_00624 568703.LGG_00696 0.0 1232.2 Lactobacillaceae ykcB Bacteria 1TPGI@1239,3F5B1@33958,4HCEY@91061,COG1807@1,COG1807@2 NA|NA|NA M Dolichyl-phosphate-mannose-protein mannosyltransferase HOOMBAJD_00625 568703.LGG_00697 6.4e-72 276.6 Lactobacillaceae Bacteria 1UIGW@1239,2DTIF@1,33KHD@2,3F7X1@33958,4ISGW@91061 NA|NA|NA S GtrA-like protein HOOMBAJD_00626 568703.LGG_00700 1.3e-128 465.7 Lactobacillaceae Bacteria 1V295@1239,3F3TH@33958,4HG3X@91061,COG0745@1,COG0745@2 NA|NA|NA K cheY-homologous receiver domain HOOMBAJD_00627 568703.LGG_00701 3.3e-239 833.9 Lactobacillaceae ciaH GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 2.7.13.3 ko:K14982 ko02020,ko02024,map02020,map02024 M00521 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Bacteria 1TS5K@1239,3F49T@33958,4H9Y1@91061,COG5002@1,COG5002@2 NA|NA|NA T His Kinase A (phosphoacceptor) domain HOOMBAJD_00628 568703.LGG_00702 1.7e-66 258.5 Lactobacillaceae yqkB Bacteria 1VK6M@1239,3F7JD@33958,4HRFS@91061,COG4918@1,COG4918@2 NA|NA|NA S Belongs to the HesB IscA family HOOMBAJD_00629 568703.LGG_00706 1.9e-121 441.8 Lactobacillaceae drgA Bacteria 1UYJU@1239,3F4H1@33958,4HBVQ@91061,COG0778@1,COG0778@2 NA|NA|NA C Nitroreductase family HOOMBAJD_00630 568703.LGG_00707 4.1e-206 723.8 Lactobacillaceae lctO ko:K10530 ko00000,ko01000 Bacteria 1TPC4@1239,3F9FE@33958,4HAU5@91061,COG1304@1,COG1304@2 NA|NA|NA C IMP dehydrogenase / GMP reductase domain HOOMBAJD_00635 568703.LGG_00708 4.1e-153 547.4 Bacilli Bacteria 1UIR0@1239,4ISQY@91061,COG1396@1,COG1396@2 NA|NA|NA K sequence-specific DNA binding HOOMBAJD_00636 568703.LGG_00709 3.1e-56 224.2 Lactobacillaceae ko:K10947 ko00000,ko03000 Bacteria 1VA94@1239,3F6I1@33958,4HKJS@91061,COG1695@1,COG1695@2 NA|NA|NA K Transcriptional regulator PadR-like family HOOMBAJD_00637 1423732.BALS01000001_gene1286 4e-42 177.2 Lactobacillaceae ygbF ko:K15383 ko00000,ko02000 9.A.58.2 Bacteria 1VBI9@1239,3F7IR@33958,4HMY5@91061,COG4095@1,COG4095@2 NA|NA|NA S Sugar efflux transporter for intercellular exchange HOOMBAJD_00638 568703.LGG_00711 6.6e-50 203.0 Lactobacillaceae Bacteria 1U7Q2@1239,2AVVX@1,31MPR@2,3FA04@33958,4IHMD@91061 NA|NA|NA HOOMBAJD_00639 568703.LGG_00712 2e-186 658.3 Lactobacillaceae qor 1.1.1.1,1.6.5.5 ko:K00001,ko:K00344 ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220 R00623,R00754,R02124,R04805,R04880,R05233,R05234,R06917,R06927,R07105,R08281,R08306,R08310 RC00050,RC00087,RC00088,RC00099,RC00116,RC00649,RC01734,RC02273 ko00000,ko00001,ko01000 Bacteria 1TRNC@1239,3F48F@33958,4HATC@91061,COG0604@1,COG0604@2 NA|NA|NA C Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily HOOMBAJD_00640 568703.LGG_00713 9.8e-56 222.6 Lactobacillaceae Bacteria 1U7KB@1239,2BQ7I@1,32J28@2,3F9V1@33958,4IHHD@91061 NA|NA|NA HOOMBAJD_00641 568703.LGG_00714 7.5e-80 303.1 Lactobacillaceae Bacteria 1U58T@1239,2CCJZ@1,303JM@2,3F565@33958,4IF00@91061 NA|NA|NA HOOMBAJD_00642 568703.LGG_00715 2.3e-207 728.0 Lactobacillaceae yubA Bacteria 1TQ84@1239,3F418@33958,4H9SR@91061,COG0628@1,COG0628@2 NA|NA|NA S AI-2E family transporter HOOMBAJD_00643 568703.LGG_00716 7.4e-26 122.5 Lactobacillaceae Bacteria 1U7YK@1239,29QE7@1,30BDI@2,3FABT@33958,4IHVZ@91061 NA|NA|NA HOOMBAJD_00644 568703.LGG_00717 1e-97 362.8 Lactobacillaceae lexA 3.4.21.88 ko:K01356 M00729 ko00000,ko00002,ko01000,ko01002,ko03400 Bacteria 1TQ3H@1239,3F3JG@33958,4HBHA@91061,COG1974@1,COG1974@2 NA|NA|NA K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair HOOMBAJD_00645 568703.LGG_00718 1.7e-76 292.0 Lactobacillaceae Bacteria 1U7KG@1239,29Q6R@1,30B5R@2,3F9VA@33958,4IHHI@91061 NA|NA|NA HOOMBAJD_00646 568703.LGG_00719 2.9e-168 597.8 Lactobacillaceae mleP2 ko:K07088 ko00000 Bacteria 1UY4N@1239,3FCFH@33958,4HB48@91061,COG0679@1,COG0679@2 NA|NA|NA S Transporter, auxin efflux carrier (AEC) family protein HOOMBAJD_00647 568703.LGG_00720 1e-105 389.4 Lactobacillaceae ywrF Bacteria 1V999@1239,3FBBG@33958,4HK1X@91061,COG1853@1,COG1853@2 NA|NA|NA S Flavin reductase like domain HOOMBAJD_00648 568703.LGG_00721 2.5e-95 355.5 Lactobacillaceae Bacteria 1U7EG@1239,29Q3E@1,30B22@2,3F9H2@33958,4IHAC@91061 NA|NA|NA HOOMBAJD_00649 568703.LGG_00722 2.3e-104 384.8 Lactobacillaceae ygfA GO:0003674,GO:0003824,GO:0006082,GO:0006575,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009396,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016882,GO:0018130,GO:0019438,GO:0019752,GO:0022611,GO:0030272,GO:0032502,GO:0034641,GO:0035999,GO:0042398,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0046653,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.3.2 ko:K01934 ko00670,ko01100,map00670,map01100 R02301 RC00183 ko00000,ko00001,ko01000 iECABU_c1320.ECABU_c31940,iECOK1_1307.ECOK1_3298,iECSF_1327.ECSF_2705,iUTI89_1310.UTI89_C3298 Bacteria 1VA91@1239,3F4KQ@33958,4HM35@91061,COG0212@1,COG0212@2 NA|NA|NA H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family HOOMBAJD_00650 568703.LGG_00723 3.3e-61 240.7 Lactobacillaceae yeaO Bacteria 1VABH@1239,3F715@33958,4HKI2@91061,COG3189@1,COG3189@2 NA|NA|NA S Protein of unknown function, DUF488 HOOMBAJD_00651 568703.LGG_00724 3.3e-172 610.9 Lactobacillaceae corA ko:K03284 ko00000,ko02000 1.A.35.1,1.A.35.3 Bacteria 1TPI8@1239,3F5FV@33958,4HE7S@91061,COG0598@1,COG0598@2 NA|NA|NA P CorA-like Mg2+ transporter protein HOOMBAJD_00652 568703.LGG_00725 3.5e-160 570.9 Lactobacillaceae mleR GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 Bacteria 1V5VW@1239,3F5D2@33958,4HHDY@91061,COG0583@1,COG0583@2 NA|NA|NA K LysR family HOOMBAJD_00653 568703.LGG_00726 0.0 1088.2 Lactobacillaceae sfcA GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006091,GO:0006113,GO:0008150,GO:0008152,GO:0009987,GO:0015980,GO:0016829,GO:0016830,GO:0016831,GO:0030145,GO:0036094,GO:0043167,GO:0043169,GO:0043464,GO:0044237,GO:0046872,GO:0046914,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0097159,GO:1901265,GO:1901363 1.1.1.38,4.1.1.101 ko:K00027,ko:K22212 ko00620,ko01120,ko01200,ko02020,map00620,map01120,map01200,map02020 R00214,R11074 RC00105,RC00282 ko00000,ko00001,ko01000 Bacteria 1TPJ3@1239,3F3RH@33958,4HBF1@91061,COG0281@1,COG0281@2 NA|NA|NA C Malic enzyme HOOMBAJD_00654 568703.LGG_00727 3.2e-170 604.4 Lactobacillaceae mleP ko:K07088 ko00000 Bacteria 1UY4N@1239,3F3S0@33958,4HDX5@91061,COG0679@1,COG0679@2 NA|NA|NA S Sodium Bile acid symporter family HOOMBAJD_00655 568703.LGG_00728 1e-87 329.3 Lactobacillaceae tpx 1.11.1.15 ko:K11065 ko00000,ko01000 Bacteria 1V474@1239,3F5VY@33958,4HFMW@91061,COG2077@1,COG2077@2 NA|NA|NA O Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides HOOMBAJD_00656 568703.LGG_00729 3.1e-95 354.4 Lactobacillaceae Bacteria 1TTTN@1239,29FTP@1,302RC@2,3F9TG@33958,4IHGE@91061 NA|NA|NA HOOMBAJD_00657 568703.LGG_00730 1.3e-171 609.0 Lactobacillaceae Bacteria 1W1BY@1239,3F71S@33958,4HY3Y@91061,COG1396@1,COG1396@2 NA|NA|NA K sequence-specific DNA binding HOOMBAJD_00658 568703.LGG_00731 3.4e-286 990.3 Lactobacillaceae Bacteria 1TSRV@1239,3F3JJ@33958,4HIAU@91061,COG1132@1,COG1132@2 NA|NA|NA V ABC transporter transmembrane region HOOMBAJD_00659 568703.LGG_00732 0.0 1188.3 Lactobacillaceae pepF Bacteria 1TR7D@1239,3F3R3@33958,4HA0P@91061,COG1164@1,COG1164@2 NA|NA|NA E Oligopeptidase F HOOMBAJD_00660 568703.LGG_00733 5e-78 297.0 Lactobacillaceae ndk GO:0003674,GO:0003824,GO:0004550,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006165,GO:0006220,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009132,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0019205,GO:0019637,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0046483,GO:0046939,GO:0055086,GO:0071704,GO:0072521,GO:0072527,GO:1901360,GO:1901564 2.7.4.6 ko:K00940 ko00230,ko00240,ko00983,ko01100,ko01110,ko01130,ko04016,map00230,map00240,map00983,map01100,map01110,map01130,map04016 M00049,M00050,M00052,M00053 R00124,R00139,R00156,R00330,R00570,R00722,R01137,R01857,R02093,R02326,R02331,R03530,R11894,R11895 RC00002 ko00000,ko00001,ko00002,ko01000,ko04131 Bacteria 1V44G@1239,3F68C@33958,4HH8C@91061,COG0105@1,COG0105@2 NA|NA|NA F Belongs to the NDK family HOOMBAJD_00661 568703.LGG_00734 1.1e-59 235.7 Lactobacillaceae Bacteria 1U7MR@1239,29Q7J@1,30B6K@2,3F9X3@33958,4IHIY@91061 NA|NA|NA HOOMBAJD_00662 568703.LGG_00735 0.0 1412.1 Lactobacillaceae yfgQ ko:K12952 ko00000,ko01000 3.A.3.23 Bacteria 1TPF5@1239,3F4Y1@33958,4H9ZI@91061,COG0474@1,COG0474@2 NA|NA|NA P E1-E2 ATPase HOOMBAJD_00663 568703.LGG_00736 2.8e-176 624.4 Lactobacillaceae 3.4.11.5 ko:K01259 ko00330,map00330 R00135 ko00000,ko00001,ko01000,ko01002 Bacteria 1U46X@1239,3F5WU@33958,4IDYA@91061,COG2267@1,COG2267@2 NA|NA|NA I Releases the N-terminal proline from various substrates HOOMBAJD_00664 568703.LGG_00737 1.8e-59 235.0 Lactobacillaceae Bacteria 1U7PN@1239,29Q8P@1,30B7R@2,3F9ZK@33958,4IHKZ@91061 NA|NA|NA HOOMBAJD_00665 568703.LGG_00738 2.9e-93 347.8 Lactobacillaceae cysE 2.3.1.178 ko:K06718 ko00260,ko01100,ko01120,map00260,map01100,map01120 M00033 R06978 RC00004,RC00096 ko00000,ko00001,ko00002,ko01000 Bacteria 1UM04@1239,3FBX6@33958,4ITN9@91061,COG1670@1,COG1670@2 NA|NA|NA J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins HOOMBAJD_00666 568703.LGG_00739 1.9e-193 681.8 Lactobacillaceae napA GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006812,GO:0006814,GO:0008150,GO:0008324,GO:0009847,GO:0015075,GO:0015077,GO:0015081,GO:0015291,GO:0015297,GO:0015318,GO:0015672,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0022890,GO:0030001,GO:0031224,GO:0032502,GO:0034220,GO:0035725,GO:0044425,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0098655,GO:0098660,GO:0098662 Bacteria 1TS32@1239,3F3QK@33958,4HAGC@91061,COG0475@1,COG0475@2 NA|NA|NA P Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family HOOMBAJD_00667 568703.LGG_00740 1.6e-120 438.7 Lactobacillaceae gph GO:0003674,GO:0003824,GO:0004672,GO:0004713,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018108,GO:0018193,GO:0018212,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0046777,GO:0071704,GO:0140096,GO:1901564 3.1.3.18 ko:K01091,ko:K07025 ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130 R01334 RC00017 ko00000,ko00001,ko01000 Bacteria 1V1FQ@1239,3FCA0@33958,4HQUJ@91061,COG0546@1,COG0546@2 NA|NA|NA S haloacid dehalogenase-like hydrolase HOOMBAJD_00668 568703.LGG_00741 1.5e-77 295.4 Lactobacillaceae Bacteria 1V6TR@1239,3F66M@33958,4HXA8@91061,COG1846@1,COG1846@2 NA|NA|NA K Transcriptional regulator HOOMBAJD_00669 568703.LGG_00742 1.6e-179 635.2 Lactobacillaceae ko:K06889 ko00000 Bacteria 1TQYU@1239,3F43H@33958,4HC4H@91061,COG1073@1,COG1073@2 NA|NA|NA D Alpha beta HOOMBAJD_00670 568703.LGG_00743 1.3e-84 318.9 Lactobacillaceae nrdI ko:K03647 ko00000 Bacteria 1V71V@1239,3F6JF@33958,4HIW7@91061,COG1780@1,COG1780@2 NA|NA|NA F Belongs to the NrdI family HOOMBAJD_00671 568703.LGG_00744 4.1e-158 563.9 Lactobacillaceae dkgB Bacteria 1TPM1@1239,3F4XF@33958,4HACK@91061,COG0656@1,COG0656@2 NA|NA|NA S reductase HOOMBAJD_00672 568703.LGG_00745 1.8e-120 438.7 Lactobacillaceae Bacteria 1U7BX@1239,29Q1I@1,30B03@2,3F9BB@33958,4IH77@91061 NA|NA|NA HOOMBAJD_00673 568703.LGG_00746 5.8e-160 570.1 Lactobacillaceae Bacteria 1VSYU@1239,3F4J2@33958,4HU15@91061,COG4814@1,COG4814@2 NA|NA|NA S Alpha beta hydrolase HOOMBAJD_00674 568703.LGG_00747 3.6e-117 427.6 Lactobacillaceae yviA Bacteria 1TPNF@1239,3F4F3@33958,4HF15@91061,COG2323@1,COG2323@2 NA|NA|NA S Protein of unknown function (DUF421) HOOMBAJD_00675 568703.LGG_00748 1.3e-73 282.3 Lactobacillaceae Bacteria 1VG8C@1239,2C9NT@1,32ZGB@2,3F749@33958,4HN0V@91061 NA|NA|NA S Protein of unknown function (DUF3290) HOOMBAJD_00676 568703.LGG_00749 1.6e-221 775.0 Lactobacillaceae yxjG 2.1.1.14 ko:K00549 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 M00017 R04405,R09365 RC00035,RC00113,RC01241 ko00000,ko00001,ko00002,ko01000 Bacteria 1TPDQ@1239,3F49P@33958,4HADW@91061,COG0620@1,COG0620@2 NA|NA|NA E methionine synthase, vitamin-B12 independent HOOMBAJD_00677 568703.LGG_00750 4.8e-87 327.0 Lactobacillaceae luxS GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0007154,GO:0007267,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009069,GO:0009086,GO:0009116,GO:0009119,GO:0009372,GO:0009987,GO:0010699,GO:0016053,GO:0016829,GO:0016846,GO:0017144,GO:0019284,GO:0019752,GO:0023052,GO:0033353,GO:0034641,GO:0042278,GO:0043094,GO:0043102,GO:0043436,GO:0043768,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044764,GO:0046128,GO:0046394,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0051186,GO:0051704,GO:0055086,GO:0071265,GO:0071267,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1901657 4.4.1.21 ko:K07173 ko00270,ko01100,ko01230,ko02024,ko02026,ko05111,map00270,map01100,map01230,map02024,map02026,map05111 M00609 R01291 RC00069,RC01929 ko00000,ko00001,ko00002,ko01000 iECIAI39_1322.ECIAI39_2877,iPC815.YPO3300 Bacteria 1V1CH@1239,3F4W2@33958,4HFPR@91061,COG1854@1,COG1854@2 NA|NA|NA H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD) HOOMBAJD_00678 568703.LGG_00751 4.6e-103 380.6 Lactobacillaceae yjbF Bacteria 1V7NH@1239,3FCEX@33958,4HJDU@91061,COG0398@1,COG0398@2 NA|NA|NA S SNARE associated Golgi protein HOOMBAJD_00679 568703.LGG_00752 3.9e-102 377.5 Lactobacillaceae ruvA GO:0000217,GO:0000400,GO:0000724,GO:0000725,GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003824,GO:0004386,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007154,GO:0008150,GO:0008152,GO:0009314,GO:0009378,GO:0009379,GO:0009432,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0022607,GO:0031668,GO:0032392,GO:0032508,GO:0032991,GO:0033202,GO:0033554,GO:0034641,GO:0042802,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0048476,GO:0050896,GO:0051259,GO:0051260,GO:0051262,GO:0051276,GO:0051289,GO:0051716,GO:0065003,GO:0071103,GO:0071496,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0097159,GO:0140097,GO:1901360,GO:1901363,GO:1902494 3.6.4.12 ko:K03550 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Bacteria 1V3KF@1239,3F42W@33958,4HHI5@91061,COG0632@1,COG0632@2 NA|NA|NA L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB HOOMBAJD_00680 568703.LGG_00753 6.2e-196 689.9 Lactobacillaceae ruvB GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0031668,GO:0033554,GO:0050896,GO:0051716,GO:0071496 3.6.4.12 ko:K03551 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Bacteria 1TR47@1239,3F47S@33958,4HBMW@91061,COG2255@1,COG2255@2 NA|NA|NA L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing HOOMBAJD_00681 568703.LGG_00754 9.5e-208 729.2 Lactobacillaceae queA GO:0002097,GO:0002099,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016853,GO:0018130,GO:0019438,GO:0034404,GO:0034470,GO:0034641,GO:0034654,GO:0034660,GO:0042455,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0051075,GO:0055086,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.99.17 ko:K07568 ko00000,ko01000,ko03016 Bacteria 1TPKD@1239,3F3VG@33958,4H9PT@91061,COG0809@1,COG0809@2 NA|NA|NA J Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) HOOMBAJD_00682 568703.LGG_00755 5.2e-228 796.6 Lactobacillaceae tgt GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0018130,GO:0019438,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046116,GO:0046483,GO:0055086,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.2.29 ko:K00773 R03789,R10209 RC00063 ko00000,ko01000,ko03016 Bacteria 1TNZ4@1239,3F43F@33958,4HCNM@91061,COG0343@1,COG0343@2 NA|NA|NA F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) HOOMBAJD_00683 568703.LGG_00756 3.9e-48 197.6 Lactobacillaceae yajC GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0031522,GO:0032991,GO:0044425,GO:0044459,GO:0044464,GO:0071944 ko:K03210 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 ko00000,ko00001,ko00002,ko02044 3.A.5.1,3.A.5.2 Bacteria 1VEMC@1239,3F7EY@33958,4HNK0@91061,COG1862@1,COG1862@2 NA|NA|NA U Preprotein translocase HOOMBAJD_00684 568703.LGG_00757 0.0 1703.7 Lactobacillaceae adhE 1.1.1.1,1.2.1.10 ko:K04072 ko00010,ko00071,ko00350,ko00620,ko00625,ko00626,ko00650,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00620,map00625,map00626,map00650,map01100,map01110,map01120,map01130,map01220 R00228,R00623,R00754,R01172,R04880,R05233,R05234,R06917,R06927 RC00004,RC00050,RC00088,RC00099,RC00116,RC00184,RC00649,RC01195 ko00000,ko00001,ko01000 Bacteria 1TPB4@1239,3F3RN@33958,4HAN8@91061,COG1012@1,COG1012@2,COG1454@1,COG1454@2 NA|NA|NA C belongs to the iron- containing alcohol dehydrogenase family HOOMBAJD_00685 568703.LGG_00759 3.9e-116 424.1 Lactobacillaceae sirR ko:K03709 ko00000,ko03000 Bacteria 1V4V7@1239,3FBMJ@33958,4HI7T@91061,COG1321@1,COG1321@2 NA|NA|NA K Helix-turn-helix diphteria tox regulatory element HOOMBAJD_00686 568703.LGG_00760 4e-289 1000.0 Lactobacillaceae zwf GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 1.1.1.363,1.1.1.49 ko:K00036 ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,ko05230,map00030,map00480,map01100,map01110,map01120,map01130,map01200,map05230 M00004,M00006,M00008 R00835,R02736,R10907 RC00001,RC00066 ko00000,ko00001,ko00002,ko01000,ko04147 iIT341.HP1101 Bacteria 1TPYF@1239,3F48G@33958,4HA73@91061,COG0364@1,COG0364@2 NA|NA|NA G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone HOOMBAJD_00687 568703.LGG_00761 9.1e-206 722.6 Lactobacillaceae dinB GO:0000731,GO:0003674,GO:0003824,GO:0003887,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0006139,GO:0006259,GO:0006260,GO:0006281,GO:0006301,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0016604,GO:0016607,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019985,GO:0031668,GO:0031974,GO:0031981,GO:0032991,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0035770,GO:0036464,GO:0042276,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0070013,GO:0071496,GO:0071704,GO:0071897,GO:0090304,GO:0140097,GO:1901360,GO:1901362,GO:1901576,GO:1990904 2.7.7.7 ko:K02346 ko00000,ko01000,ko03400 Bacteria 1TP42@1239,3F44N@33958,4HADJ@91061,COG0389@1,COG0389@2 NA|NA|NA L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII HOOMBAJD_00688 568703.LGG_00212 1.6e-260 904.8 Lactobacillaceae nox 1.6.3.4 ko:K17869 ko00000,ko01000 Bacteria 1TPWW@1239,3F449@33958,4H9U7@91061,COG0446@1,COG0446@2 NA|NA|NA C NADH oxidase HOOMBAJD_00689 568703.LGG_00213 2.9e-116 424.5 Lactobacillaceae Bacteria 1U55V@1239,29DQI@1,300NC@2,3F4UQ@33958,4IEX6@91061 NA|NA|NA HOOMBAJD_00690 568703.LGG_00215 1.8e-232 811.6 Lactobacillaceae ko:K06872 ko00000 Bacteria 1VHE2@1239,3F75Q@33958,4HJHN@91061,COG1512@1,COG1512@2 NA|NA|NA S TPM domain HOOMBAJD_00691 568703.LGG_00216 4e-129 467.6 Lactobacillaceae yxaA ko:K07090 ko00000 Bacteria 1TPMA@1239,3FCAW@33958,4HCYJ@91061,COG0730@1,COG0730@2 NA|NA|NA S Sulfite exporter TauE/SafE HOOMBAJD_00692 568703.LGG_00217 1e-55 222.6 Lactobacillaceae ywjH Bacteria 1VAPQ@1239,3FBP6@33958,4IRG9@91061,COG4272@1,COG4272@2 NA|NA|NA S Protein of unknown function (DUF1634) HOOMBAJD_00694 568703.LGG_00219 2.2e-65 255.4 Lactobacillaceae Bacteria 1U898@1239,29QKG@1,30BK4@2,3FAQ9@33958,4II73@91061 NA|NA|NA HOOMBAJD_00695 568703.LGG_00220 2.7e-51 207.6 Lactobacillaceae Bacteria 1U7P0@1239,29Q8B@1,30B7C@2,3F9YT@33958,4IHK9@91061 NA|NA|NA HOOMBAJD_00696 568703.LGG_00221 2.7e-82 311.2 Lactobacillaceae fld ko:K03839 ko00000 Bacteria 1U7EW@1239,3F9HX@33958,4IHAT@91061,COG0716@1,COG0716@2 NA|NA|NA C Flavodoxin HOOMBAJD_00697 1423816.BACQ01000030_gene1046 3.4e-36 157.1 Lactobacillaceae Bacteria 1USWD@1239,2930D@1,3270J@2,3F7S4@33958,4IG6X@91061 NA|NA|NA HOOMBAJD_00698 568703.LGG_00223 6.7e-27 125.9 Lactobacillaceae Bacteria 1U8D5@1239,29QNT@1,30BNF@2,3FAUS@33958,4IIB4@91061 NA|NA|NA HOOMBAJD_00699 568703.LGG_00225 1.5e-86 325.5 Lactobacillaceae 1.1.1.26 ko:K00015 ko00630,ko01100,ko01110,ko01120,map00630,map01100,map01110,map01120 R00717,R01388 RC00031,RC00042 ko00000,ko00001,ko01000 Bacteria 1TPCX@1239,3F4Z6@33958,4HASY@91061,COG1052@1,COG1052@2 NA|NA|NA CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family HOOMBAJD_00700 568703.LGG_00225 2.8e-62 244.6 Lactobacillaceae 1.1.1.26 ko:K00015 ko00630,ko01100,ko01110,ko01120,map00630,map01100,map01110,map01120 R00717,R01388 RC00031,RC00042 ko00000,ko00001,ko01000 Bacteria 1TPCX@1239,3F4Z6@33958,4HASY@91061,COG1052@1,COG1052@2 NA|NA|NA CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family HOOMBAJD_00701 568703.LGG_00226 9.1e-71 272.7 Lactobacillaceae pdxH ko:K07006 ko00000 Bacteria 1V4U5@1239,3FBB6@33958,4HX4S@91061,COG3576@1,COG3576@2 NA|NA|NA S Pyridoxamine 5'-phosphate oxidase HOOMBAJD_00702 568703.LGG_00227 6.4e-38 162.9 Lactobacillaceae Bacteria 1VENK@1239,3F7EK@33958,4HNKV@91061,COG2261@1,COG2261@2 NA|NA|NA S Transglycosylase associated protein HOOMBAJD_00703 568703.LGG_00228 5.8e-89 333.6 Lactobacillaceae Bacteria 1VN34@1239,3F8AH@33958,4HRAM@91061,COG1302@1,COG1302@2 NA|NA|NA S Protein conserved in bacteria HOOMBAJD_00704 568703.LGG_00229 2.5e-29 134.0 Lactobacillaceae Bacteria 1U7VV@1239,29QCQ@1,30BBZ@2,3FA8J@33958,4IHT8@91061 NA|NA|NA HOOMBAJD_00705 1423732.BALS01000042_gene2674 2.6e-44 184.5 Lactobacillaceae asp23 Bacteria 1VCNX@1239,3FB58@33958,4HKR6@91061,COG1302@1,COG1302@2 NA|NA|NA S Asp23 family, cell envelope-related function HOOMBAJD_00706 568703.LGG_00231 7.9e-65 253.1 Lactobacillaceae asp2 Bacteria 1VJRA@1239,3F692@33958,4HXJN@91061,COG1302@1,COG1302@2 NA|NA|NA S Asp23 family, cell envelope-related function HOOMBAJD_00707 568703.LGG_00232 2e-128 464.9 Lactobacillaceae hadL 3.8.1.2 ko:K01560,ko:K07025 ko00361,ko00625,ko01100,ko01120,map00361,map00625,map01100,map01120 R05287 RC00697 ko00000,ko00001,ko01000 Bacteria 1TQYM@1239,3F7UN@33958,4HPIM@91061,COG1011@1,COG1011@2 NA|NA|NA S Haloacid dehalogenase-like hydrolase HOOMBAJD_00708 568703.LGG_00233 6e-115 420.2 Lactobacillaceae Bacteria 1TT00@1239,3F538@33958,4HE38@91061,COG3819@1,COG3819@2 NA|NA|NA S Protein of unknown function (DUF969) HOOMBAJD_00709 1423816.BACQ01000030_gene1034 5.2e-146 523.9 Lactobacillaceae Bacteria 1TQ17@1239,3F5QJ@33958,4HAJT@91061,COG3817@1,COG3817@2 NA|NA|NA S Protein of unknown function (DUF979) HOOMBAJD_00710 568703.LGG_00238 1e-119 436.0 Lactobacillaceae pcp GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0019538,GO:0043170,GO:0044238,GO:0044424,GO:0044464,GO:0071704,GO:1901564 3.4.19.3 ko:K01304 ko00000,ko01000,ko01002 Bacteria 1TRRX@1239,3F46I@33958,4HCIJ@91061,COG2039@1,COG2039@2 NA|NA|NA O Removes 5-oxoproline from various penultimate amino acid residues except L-proline HOOMBAJD_00711 568703.LGG_00239 1.3e-103 382.5 Lactobacillaceae 1.5.1.40 ko:K06988 ko00000,ko01000 Bacteria 1VW6H@1239,3F6QU@33958,4HWI6@91061,COG2085@1,COG2085@2 NA|NA|NA S NADP oxidoreductase coenzyme F420-dependent HOOMBAJD_00713 568703.LGG_00240 3e-127 461.1 Lactobacillaceae cobQ ko:K07009 ko00000 Bacteria 1U7I9@1239,3F4CH@33958,4HD1P@91061,COG3442@1,COG3442@2 NA|NA|NA S glutamine amidotransferase HOOMBAJD_00714 568703.LGG_00241 1.3e-66 258.8 Lactobacillaceae Bacteria 1U6EK@1239,29PCH@1,30AAR@2,3F7R0@33958,4IG6D@91061 NA|NA|NA HOOMBAJD_00715 568703.LGG_00242 6.8e-133 479.9 Lactobacillaceae rsmG GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.170 ko:K03501 ko00000,ko01000,ko03009,ko03036 Bacteria 1TPBT@1239,3F3ZX@33958,4HAAZ@91061,COG0357@1,COG0357@2 NA|NA|NA J Specifically methylates the N7 position of a guanine in 16S rRNA HOOMBAJD_00716 568703.LGG_00243 2.4e-142 511.5 Lactobacillaceae noc ko:K03497 ko00000,ko03000,ko03036,ko04812 Bacteria 1TP0I@1239,3F4RU@33958,4HAC6@91061,COG1475@1,COG1475@2 NA|NA|NA K Belongs to the ParB family HOOMBAJD_00717 568703.LGG_00244 2.8e-137 494.6 Lactobacillaceae soj ko:K03496 ko00000,ko03036,ko04812 Bacteria 1TP8S@1239,3F4AE@33958,4HAYM@91061,COG1192@1,COG1192@2 NA|NA|NA D Sporulation initiation inhibitor HOOMBAJD_00718 568703.LGG_00245 2e-155 555.1 Lactobacillaceae spo0J GO:0005575,GO:0005622,GO:0005623,GO:0007059,GO:0008150,GO:0009295,GO:0009987,GO:0022603,GO:0042173,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043590,GO:0043937,GO:0043938,GO:0044424,GO:0044464,GO:0045595,GO:0045597,GO:0045881,GO:0048518,GO:0048522,GO:0050789,GO:0050793,GO:0050794,GO:0051094,GO:0065007 ko:K03497 ko00000,ko03000,ko03036,ko04812 Bacteria 1TQ2B@1239,3F47R@33958,4H9TB@91061,COG1475@1,COG1475@2 NA|NA|NA K Belongs to the ParB family HOOMBAJD_00719 568703.LGG_00246 1.3e-30 138.3 Lactobacillaceae yyzM Bacteria 1VEQ7@1239,3F823@33958,4HNHU@91061,COG4481@1,COG4481@2 NA|NA|NA S Bacterial protein of unknown function (DUF951) HOOMBAJD_00720 568703.LGG_00247 1.5e-200 705.3 Lactobacillaceae ychF GO:0003674,GO:0003824,GO:0004857,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006950,GO:0006979,GO:0008150,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030234,GO:0043021,GO:0043022,GO:0043023,GO:0043086,GO:0044092,GO:0044424,GO:0044464,GO:0044877,GO:0050790,GO:0050896,GO:0065007,GO:0065009,GO:0098772 ko:K06942 ko00000,ko03009 Bacteria 1TPRK@1239,3F3TK@33958,4H9SQ@91061,COG0012@1,COG0012@2 NA|NA|NA J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner HOOMBAJD_00721 568703.LGG_00248 7.3e-141 506.5 Lactobacillaceae XK27_01040 Bacteria 1VF5N@1239,3F4JS@33958,4HH7B@91061,COG4858@1,COG4858@2 NA|NA|NA S Protein of unknown function (DUF1129) HOOMBAJD_00722 568703.LGG_00249 5.1e-268 929.9 Lactobacillaceae guaB GO:0003674,GO:0003824,GO:0003938,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006183,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009163,GO:0009165,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009987,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046039,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0050896,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 1.1.1.205 ko:K00088 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 M00050 R01130,R08240 RC00143,RC02207 ko00000,ko00001,ko00002,ko01000,ko04147 iAPECO1_1312.APECO1_4018,iECABU_c1320.ECABU_c28100,iECP_1309.ECP_2510,iECSF_1327.ECSF_2349,iUTI89_1310.UTI89_C2826,ic_1306.c3027 Bacteria 1TNZ1@1239,3F3XN@33958,4H9V3@91061,COG0516@1,COG0516@2,COG0517@1,COG0517@2 NA|NA|NA F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides HOOMBAJD_00723 568703.LGG_00251 1.8e-119 435.3 Lactobacillaceae Bacteria 1VW0F@1239,2F4SR@1,33XFD@2,3F6TR@33958,4HWCG@91061 NA|NA|NA HOOMBAJD_00724 568703.LGG_00252 2.5e-121 441.4 Lactobacillaceae Bacteria 1TP9M@1239,3F3Y0@33958,4HB3T@91061,COG0745@1,COG0745@2 NA|NA|NA K response regulator HOOMBAJD_00725 568703.LGG_00253 1.2e-219 768.8 Lactobacillaceae hpk31 2.7.13.3 ko:K07636 ko02020,map02020 M00434 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Bacteria 1TPB6@1239,3F479@33958,4HARU@91061,COG5002@1,COG5002@2 NA|NA|NA T Histidine kinase HOOMBAJD_00726 568703.LGG_00254 4.5e-236 823.5 Lactobacillaceae dacA GO:0003674,GO:0003824,GO:0004175,GO:0004180,GO:0004185,GO:0005575,GO:0005618,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0008238,GO:0009002,GO:0016787,GO:0017171,GO:0019538,GO:0030312,GO:0043170,GO:0044238,GO:0044464,GO:0070008,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564 3.4.16.4 ko:K01286,ko:K07258 ko00550,ko01100,map00550,map01100 ko00000,ko00001,ko01000,ko01002,ko01011 Bacteria 1TQN0@1239,3F43S@33958,4HBD4@91061,COG1686@1,COG1686@2 NA|NA|NA M Belongs to the peptidase S11 family HOOMBAJD_00727 568703.LGG_00256 2.8e-85 321.2 Lactobacillaceae greA ko:K03624,ko:K04760 ko00000,ko03021 Bacteria 1V1G3@1239,3F6ZK@33958,4HW8H@91061,COG0782@1,COG0782@2 NA|NA|NA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides HOOMBAJD_00728 568703.LGG_00257 2.7e-296 1023.8 Lactobacillaceae murE 6.3.2.13,6.3.2.7 ko:K01928,ko:K05362 ko00300,ko00550,ko01100,map00300,map00550,map01100 R02786,R02788 RC00064,RC00090 ko00000,ko00001,ko01000,ko01011 Bacteria 1TPQE@1239,3F3UE@33958,4H9T1@91061,COG0769@1,COG0769@2 NA|NA|NA M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan HOOMBAJD_00729 568703.LGG_00258 2e-140 505.0 Lactobacillaceae racD 5.1.1.13 ko:K01779 ko00250,ko01054,map00250,map01054 R00491 RC00302 ko00000,ko00001,ko01000 Bacteria 1V34N@1239,3F3XZ@33958,4HG8W@91061,COG1794@1,COG1794@2 NA|NA|NA G Belongs to the aspartate glutamate racemases family HOOMBAJD_00730 568703.LGG_00259 1.1e-163 582.4 Lactobacillaceae yvgN Bacteria 1TPM1@1239,3F3PW@33958,4HARE@91061,COG0656@1,COG0656@2 NA|NA|NA C Aldo keto reductase HOOMBAJD_00731 568703.LGG_00260 2.8e-140 504.6 Lactobacillaceae iolR ko:K06608 ko00000,ko03000 Bacteria 1TTGR@1239,3F9D7@33958,4HEVD@91061,COG1349@1,COG1349@2 NA|NA|NA K DeoR C terminal sensor domain HOOMBAJD_00732 568703.LGG_00261 1.1e-267 928.7 Lactobacillaceae iolT ko:K06609 ko00000,ko02000 2.A.1.1.26 Bacteria 1TREV@1239,3F3ZS@33958,4HAN1@91061,COG0477@1,COG2814@2 NA|NA|NA EGP Major facilitator Superfamily HOOMBAJD_00733 568703.LGG_00262 3.6e-274 950.3 Lactobacillaceae iolA 1.2.1.18,1.2.1.27 ko:K00140 ko00280,ko00410,ko00562,ko00640,ko01100,ko01200,map00280,map00410,map00562,map00640,map01100,map01200 M00013 R00705,R00706,R00922,R00935 RC00004,RC02723,RC02817 ko00000,ko00001,ko00002,ko01000 Bacteria 1TP4S@1239,3F47F@33958,4H9MF@91061,COG1012@1,COG1012@2 NA|NA|NA C Belongs to the aldehyde dehydrogenase family HOOMBAJD_00734 568703.LGG_00263 8.4e-156 556.2 Lactobacillaceae iolB 5.3.1.30 ko:K03337 ko00562,ko01100,ko01120,map00562,map01100,map01120 R08503 RC00541 ko00000,ko00001,ko01000 Bacteria 1TR6M@1239,3F4TI@33958,4HCDY@91061,COG3718@1,COG3718@2 NA|NA|NA G Involved in the isomerization of 5-deoxy-glucuronate (5DG) to 5-dehydro-2-deoxy-D-gluconate (DKG or 2-deoxy-5-keto-D- gluconate) HOOMBAJD_00735 568703.LGG_00264 1.4e-178 632.1 Lactobacillaceae iolC GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0006629,GO:0006644,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009056,GO:0009395,GO:0009987,GO:0016042,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0019200,GO:0019637,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044262,GO:0044424,GO:0044464,GO:0046434,GO:0046835,GO:0071704,GO:1901575 2.7.1.92 ko:K03338 ko00562,ko01100,ko01120,map00562,map01100,map01120 R05661 RC00002,RC00017 ko00000,ko00001,ko01000 iYO844.BSU39740 Bacteria 1TPGM@1239,3FC23@33958,4HB78@91061,COG0524@1,COG0524@2 NA|NA|NA H Catalyzes the phosphorylation of 5-dehydro-2-deoxy-D- gluconate (2-deoxy-5-keto-D-gluconate or DKG) to 6-phospho-5- dehydro-2-deoxy-D-gluconate (DKGP) HOOMBAJD_00736 568703.LGG_00265 0.0 1265.0 Lactobacillaceae iolD 3.7.1.22 ko:K03336 ko00562,ko01100,ko01120,map00562,map01100,map01120 R08603 RC02331 ko00000,ko00001,ko01000 Bacteria 1UI18@1239,3F9EH@33958,4HCPP@91061,COG3962@1,COG3962@2 NA|NA|NA E Involved in the cleavage of the C1-C2 bond of 3D- (3,5 4)-trihydroxycyclohexane-1,2-dione (THcHDO) to yield 5-deoxy- glucuronate (5DG) HOOMBAJD_00737 568703.LGG_00266 1.1e-192 679.1 Lactobacillaceae iolG 1.1.1.18,1.1.1.369 ko:K00010 ko00521,ko00562,ko01100,ko01120,ko01130,map00521,map00562,map01100,map01120,map01130 R01183,R09951 RC00182 ko00000,ko00001,ko01000 Bacteria 1TRHA@1239,3F4K5@33958,4HA6R@91061,COG0673@1,COG0673@2 NA|NA|NA C Involved in the oxidation of myo-inositol (MI) and D- chiro-inositol (DCI) to 2-keto-myo-inositol (2KMI or 2-inosose) and 1-keto-D-chiro-inositol (1KDCI), respectively HOOMBAJD_00738 568703.LGG_00267 4.1e-195 687.2 Lactobacillaceae iolG2 1.1.1.18,1.1.1.369 ko:K00010 ko00521,ko00562,ko01100,ko01120,ko01130,map00521,map00562,map01100,map01120,map01130 R01183,R09951 RC00182 ko00000,ko00001,ko01000 Bacteria 1TQJX@1239,3F5FQ@33958,4HAJ8@91061,COG0673@1,COG0673@2 NA|NA|NA S Oxidoreductase family, C-terminal alpha/beta domain HOOMBAJD_00739 568703.LGG_00268 9.8e-174 615.9 Lactobacillaceae iolE 4.2.1.44 ko:K03335 ko00562,ko01100,ko01120,map00562,map01100,map01120 R02782,R05659 RC00782,RC01448 ko00000,ko00001,ko01000 Bacteria 1TPZ2@1239,3F5FP@33958,4HCIM@91061,COG1082@1,COG1082@2 NA|NA|NA G Catalyzes the dehydration of inosose (2-keto-myo- inositol, 2KMI or 2,4,6 3,5-pentahydroxycyclohexanone) to 3D- (3,5 4)-trihydroxycyclohexane-1,2-dione (D-2,3-diketo-4-deoxy-epi- inositol) HOOMBAJD_00740 568703.LGG_00269 5.2e-156 557.0 Lactobacillaceae iolJ 4.1.2.13,4.1.2.29 ko:K01624,ko:K03339 ko00010,ko00030,ko00051,ko00562,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00562,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230 M00001,M00003,M00165,M00167,M00344,M00345 R01068,R01070,R01829,R02568,R05378 RC00438,RC00439,RC00603,RC00604,RC00721 ko00000,ko00001,ko00002,ko01000 iYO844.BSU39670 Bacteria 1TQ01@1239,3F9NW@33958,4H9ZU@91061,COG0191@1,COG0191@2 NA|NA|NA G Fructose-bisphosphate aldolase class-II HOOMBAJD_00741 568703.LGG_00270 1.7e-66 258.5 Lactobacillaceae iolK Bacteria 1V3SS@1239,3F6UD@33958,4HI9G@91061,COG1942@1,COG1942@2 NA|NA|NA S Tautomerase enzyme HOOMBAJD_00742 568703.LGG_00271 1.8e-156 558.5 Lactobacillaceae iolI 5.3.99.11 ko:K06606 ko00562,ko01120,map00562,map01120 R09952 RC01513 ko00000,ko00001,ko01000 Bacteria 1U626@1239,3F6UX@33958,4IFR6@91061,COG4130@1,COG4130@2 NA|NA|NA G Xylose isomerase-like TIM barrel HOOMBAJD_00743 568703.LGG_00272 4.4e-171 607.1 Lactobacillaceae iolH ko:K06605 ko00000 Bacteria 1UZXE@1239,3F5PE@33958,4HEG4@91061,COG1082@1,COG1082@2 NA|NA|NA G Xylose isomerase-like TIM barrel HOOMBAJD_00744 568703.LGG_00273 2.1e-146 525.0 Lactobacillaceae gntR Bacteria 1TR0N@1239,3F42G@33958,4HB9E@91061,COG1737@1,COG1737@2 NA|NA|NA K rpiR family HOOMBAJD_00745 568703.LGG_00274 1.7e-165 588.6 Lactobacillaceae gnd 1.1.1.343,1.1.1.44 ko:K00033 ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200 M00004,M00006 R01528,R10221 RC00001,RC00539 ko00000,ko00001,ko00002,ko01000 Bacteria 1UHN4@1239,3F4X7@33958,4IS44@91061,COG1023@1,COG1023@2 NA|NA|NA G Dehydrogenase HOOMBAJD_00746 568703.LGG_00275 8.7e-303 1045.4 Lactobacillaceae gntK 2.7.1.12,2.7.1.17,2.7.1.5 ko:K00848,ko:K00851,ko:K00854 ko00030,ko00040,ko00051,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00040,map00051,map01100,map01110,map01120,map01130,map01200 M00014 R01639,R01737,R01902,R03014 RC00002,RC00017,RC00538 ko00000,ko00001,ko00002,ko01000 Bacteria 1TQ1I@1239,3F4R2@33958,4H9W6@91061,COG1070@1,COG1070@2 NA|NA|NA G Belongs to the FGGY kinase family HOOMBAJD_00747 568703.LGG_00277 2.3e-206 724.9 Lactobacillaceae gntP ko:K03299,ko:K06155 ko00000,ko02000 2.A.8,2.A.8.1.4 Bacteria 1TQ14@1239,3F3V0@33958,4HB0Y@91061,COG2610@1,COG2610@2 NA|NA|NA EG Gluconate HOOMBAJD_00748 568703.LGG_00278 2.8e-252 877.5 Lactobacillaceae Bacteria 1VTM4@1239,2EAQX@1,334T5@2,3F9JM@33958,4HU2I@91061 NA|NA|NA S O-antigen ligase like membrane protein HOOMBAJD_00749 568703.LGG_00279 2.8e-151 541.2 Lactobacillaceae Bacteria 1V7WM@1239,3F7T8@33958,4HWEX@91061,COG1216@1,COG1216@2 NA|NA|NA S Glycosyl transferase family 2 HOOMBAJD_00750 568703.LGG_00280 7e-127 459.9 Lactobacillaceae welB Bacteria 1V3IY@1239,3F6KK@33958,4HVIA@91061,COG1216@1,COG1216@2 NA|NA|NA S Glycosyltransferase like family 2 HOOMBAJD_00751 568703.LGG_00281 1.3e-190 672.2 Lactobacillaceae rgpB ko:K12997 ko00000,ko01000,ko01003,ko01005 GT2 Bacteria 1V2EP@1239,3F74Y@33958,4HHPV@91061,COG0463@1,COG0463@2 NA|NA|NA M Glycosyl transferase family 2 HOOMBAJD_00752 568703.LGG_00282 9.9e-261 905.6 Lactobacillaceae cps1C Bacteria 1TP7R@1239,3F48Q@33958,4HC84@91061,COG2244@1,COG2244@2 NA|NA|NA S Membrane protein involved in the export of O-antigen and teichoic acid HOOMBAJD_00753 568703.LGG_00283 3.6e-196 690.6 Lactobacillaceae ko:K06320 ko00000 Bacteria 1V4GK@1239,3F8QI@33958,4HN7W@91061,COG4641@1,COG4641@2 NA|NA|NA S Protein conserved in bacteria HOOMBAJD_00754 568703.LGG_00284 7.6e-58 229.6 Lactobacillaceae Bacteria 1VZWZ@1239,2CICD@1,3462T@2,3F6T8@33958,4HY4B@91061 NA|NA|NA HOOMBAJD_00755 568703.LGG_00285 4.1e-130 470.7 Lactobacillaceae fhuC 3.6.3.35 ko:K02074,ko:K09817,ko:K19973 ko02010,map02010 M00242,M00244,M00792 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.15,3.A.1.15.15,3.A.1.15.3,3.A.1.15.5 Bacteria 1TQ68@1239,3F49M@33958,4HAZI@91061,COG1121@1,COG1121@2 NA|NA|NA P ABC transporter HOOMBAJD_00756 568703.LGG_00286 3e-134 484.6 Lactobacillaceae znuB ko:K02075,ko:K09816 ko02010,map02010 M00242,M00244 ko00000,ko00001,ko00002,ko02000 3.A.1.15,3.A.1.15.3,3.A.1.15.5 Bacteria 1V0SX@1239,3F4BC@33958,4HE09@91061,COG1108@1,COG1108@2 NA|NA|NA U ABC 3 transport family HOOMBAJD_00757 568703.LGG_00287 1.3e-162 578.9 Lactobacillaceae Bacteria 1UZK9@1239,3F5JR@33958,4HG1F@91061,COG0639@1,COG0639@2 NA|NA|NA T Calcineurin-like phosphoesterase superfamily domain HOOMBAJD_00758 568703.LGG_00288 9.3e-161 572.8 Lactobacillaceae glxR 1.1.1.31,1.1.1.60 ko:K00020,ko:K00042 ko00280,ko00630,ko01100,map00280,map00630,map01100 R01745,R01747,R05066 RC00099 ko00000,ko00001,ko01000 iJN678.mmsB Bacteria 1TR4F@1239,3F3XC@33958,4H9MA@91061,COG2084@1,COG2084@2 NA|NA|NA I Dehydrogenase HOOMBAJD_00759 568703.LGG_00289 0.0 1182.9 Lactobacillaceae pepF GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006465,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009987,GO:0010467,GO:0016485,GO:0016787,GO:0019538,GO:0034641,GO:0043170,GO:0043603,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0051604,GO:0070011,GO:0071704,GO:0140096,GO:1901564 ko:K08602 ko00000,ko01000,ko01002 Bacteria 1TP4P@1239,3F4E5@33958,4HA7X@91061,COG1164@1,COG1164@2 NA|NA|NA E oligoendopeptidase F HOOMBAJD_00760 568703.LGG_00290 2e-200 704.9 Lactobacillaceae brpA Bacteria 1TR1B@1239,3F3MQ@33958,4HA09@91061,COG1316@1,COG1316@2 NA|NA|NA K Cell envelope-like function transcriptional attenuator common domain protein HOOMBAJD_00761 568703.LGG_00292 2.3e-246 857.8 Lactobacillaceae brnQ GO:0003333,GO:0003674,GO:0005215,GO:0005304,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0006855,GO:0006865,GO:0008150,GO:0008324,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015175,GO:0015179,GO:0015188,GO:0015190,GO:0015238,GO:0015318,GO:0015658,GO:0015711,GO:0015803,GO:0015804,GO:0015807,GO:0015818,GO:0015820,GO:0015829,GO:0015849,GO:0015893,GO:0016020,GO:0022857,GO:0034220,GO:0042221,GO:0042493,GO:0044464,GO:0046942,GO:0046943,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098655,GO:0098656,GO:1902475,GO:1903785,GO:1903825,GO:1905039 ko:K03311 ko00000 2.A.26 Bacteria 1TQIS@1239,3F3KC@33958,4HAKA@91061,COG1114@1,COG1114@2 NA|NA|NA U Component of the transport system for branched-chain amino acids HOOMBAJD_00762 568703.LGG_00293 4.5e-70 271.2 Lactobacillaceae ko:K03642,ko:K07184 ko00000 Bacteria 1VB6H@1239,3F66H@33958,4I1GZ@91061,COG3103@1,COG3103@2 NA|NA|NA T Sh3 type 3 domain protein HOOMBAJD_00763 568703.LGG_00294 2.2e-134 485.0 Lactobacillaceae glcR ko:K02444,ko:K22103 ko00000,ko03000 Bacteria 1V1VH@1239,3FC5T@33958,4HHQ0@91061,COG1349@1,COG1349@2 NA|NA|NA K DeoR C terminal sensor domain HOOMBAJD_00764 568703.LGG_00295 2.2e-145 521.5 Lactobacillaceae Bacteria 1V0TF@1239,3FBRX@33958,4HVF8@91061,COG1215@1,COG1215@2 NA|NA|NA M Glycosyltransferase like family 2 HOOMBAJD_00765 568703.LGG_00296 4.8e-134 483.8 Lactobacillaceae XK27_06755 Bacteria 1U7F2@1239,3F9IA@33958,4IHB0@91061,COG5523@1,COG5523@2 NA|NA|NA S Protein of unknown function (DUF975) HOOMBAJD_00766 568703.LGG_00297 8.4e-52 209.5 Lactobacillaceae Bacteria 1U71D@1239,29PTZ@1,30AS5@2,3F8UT@33958,4IGVU@91061 NA|NA|NA HOOMBAJD_00767 568703.LGG_00298 4.5e-106 390.6 Lactobacillaceae lepB 3.4.21.89 ko:K03100 ko02024,ko03060,map02024,map03060 ko00000,ko00001,ko01000,ko01002 Bacteria 1V7H9@1239,3F4SM@33958,4HIQ4@91061,COG0681@1,COG0681@2 NA|NA|NA U Belongs to the peptidase S26 family HOOMBAJD_00768 568703.LGG_00299 2.3e-173 614.8 Lactobacillaceae draG Bacteria 1UZ60@1239,3F9P4@33958,4HF0W@91061,COG1397@1,COG1397@2 NA|NA|NA O ADP-ribosylglycohydrolase HOOMBAJD_00769 568703.LGG_00300 2e-291 1007.7 Lactobacillaceae ko:K06158 ko00000,ko03012 Bacteria 1TPAX@1239,3FC7X@33958,4HC58@91061,COG0488@1,COG0488@2 NA|NA|NA S ABC transporter HOOMBAJD_00770 568703.LGG_00301 6.5e-139 500.0 Bacteria ksgA GO:0000154,GO:0000179,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.182,2.1.1.197,2.5.1.134 ko:K02169,ko:K02528,ko:K17216,ko:K17462 ko00270,ko00780,ko01100,ko01230,map00270,map00780,map01100,map01230 M00572,M00609 R09543,R10305,R10404,R10716 RC00003,RC00020,RC00069,RC00460,RC03257 ko00000,ko00001,ko00002,ko01000,ko03009 Bacteria COG0030@1,COG0030@2 NA|NA|NA J rRNA (adenine-N6,N6-)-dimethyltransferase activity HOOMBAJD_00772 568703.LGG_01155 1.2e-17 94.7 Lactobacillaceae Bacteria 1U77Q@1239,29PYH@1,30AWY@2,3F930@33958,4IH2I@91061 NA|NA|NA HOOMBAJD_00773 1423816.BACQ01000018_gene641 3.9e-194 684.1 Lactobacillaceae yttB Bacteria 1TPJ6@1239,3F4F9@33958,4HAGJ@91061,COG0477@1,COG2814@2 NA|NA|NA EGP Major facilitator Superfamily HOOMBAJD_00774 568703.LGG_01158 2.8e-284 983.8 Lactobacillaceae pipD ko:K08659 ko00000,ko01000,ko01002 Bacteria 1TQ0F@1239,3F3M4@33958,4HC3G@91061,COG4690@1,COG4690@2 NA|NA|NA E Dipeptidase HOOMBAJD_00776 1423807.BACO01000065_gene2024 8.3e-09 66.6 Lactobacillaceae Bacteria 1W08C@1239,2FI40@1,349WT@2,3F7QX@33958,4HYGC@91061 NA|NA|NA HOOMBAJD_00777 568703.LGG_01161 1.5e-127 462.2 Lactobacillaceae Bacteria 1VDCB@1239,3F50R@33958,4HD4C@91061,COG0406@1,COG0406@2 NA|NA|NA G Phosphoglycerate mutase family HOOMBAJD_00778 568703.LGG_01162 1.1e-121 442.6 Lactobacillaceae Bacteria 1V6CF@1239,3FBF7@33958,4IQ0F@91061,COG1309@1,COG1309@2 NA|NA|NA K Bacterial regulatory proteins, tetR family HOOMBAJD_00779 568703.LGG_01163 0.0 1089.3 Lactobacillaceae ycfI GO:0005575,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 ko:K06147,ko:K18891 ko02010,map02010 M00708 ko00000,ko00001,ko00002,ko02000 3.A.1.106,3.A.1.109,3.A.1.135,3.A.1.21 Bacteria 1TP0B@1239,3F3SP@33958,4H9SC@91061,COG1132@1,COG1132@2 NA|NA|NA V ABC transporter, ATP-binding protein HOOMBAJD_00780 568703.LGG_01164 0.0 1213.0 Lactobacillaceae yfiC ko:K06147 ko00000,ko02000 3.A.1.106,3.A.1.109,3.A.1.21 Bacteria 1TP0B@1239,3F3PD@33958,4HA3S@91061,COG1132@1,COG1132@2 NA|NA|NA V ABC transporter HOOMBAJD_00781 568703.LGG_01165 1.9e-141 508.4 Lactobacillaceae Bacteria 1VBJA@1239,3F41J@33958,4HSVK@91061,COG0431@1,COG0431@2 NA|NA|NA S NADPH-dependent FMN reductase HOOMBAJD_00782 568703.LGG_01166 7.3e-166 589.7 Lactobacillaceae 1.13.11.2 ko:K07104 ko00361,ko00362,ko00622,ko00643,ko01100,ko01120,ko01220,map00361,map00362,map00622,map00643,map01100,map01120,map01220 M00569 R00816,R04089,R05295,R05404,R05406,R07795 RC00387,RC00643,RC01075,RC01364,RC01914 ko00000,ko00001,ko00002,ko01000 Bacteria 1TPRF@1239,3F62I@33958,4HAE7@91061,COG2514@1,COG2514@2 NA|NA|NA S glyoxalase HOOMBAJD_00783 568703.LGG_01167 3.5e-196 690.6 Lactobacillaceae ampC Bacteria 1U828@1239,3FBDZ@33958,4HA0Q@91061,COG1680@1,COG1680@2 NA|NA|NA V Beta-lactamase HOOMBAJD_00784 568703.LGG_01168 1e-262 912.1 Lactobacillaceae murF 6.3.2.10,6.3.2.13 ko:K01928,ko:K01929 ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502 R02788,R04573,R04617 RC00064,RC00090,RC00141 ko00000,ko00001,ko01000,ko01011 Bacteria 1TRG9@1239,3FBS5@33958,4HAMY@91061,COG0770@1,COG0770@2 NA|NA|NA M Domain of unknown function (DUF1727) HOOMBAJD_00785 568703.LGG_01169 6e-111 406.8 Lactobacillaceae tdk GO:0003674,GO:0003824,GO:0004797,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006213,GO:0006259,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009120,GO:0009123,GO:0009124,GO:0009157,GO:0009162,GO:0009165,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0018130,GO:0019136,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046104,GO:0046125,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0090304,GO:0090407,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.1.21 ko:K00857 ko00240,ko00983,ko01100,map00240,map00983,map01100 R01567,R02099,R08233 RC00002,RC00017 ko00000,ko00001,ko01000 iAF1260.b1238,iBWG_1329.BWG_1065,iECDH10B_1368.ECDH10B_1298,iECDH1ME8569_1439.ECDH1ME8569_1176,iEcDH1_1363.EcDH1_2411,iJO1366.b1238,iJR904.b1238,iPC815.YPO2176,iY75_1357.Y75_RS06470 Bacteria 1TRVM@1239,3F4UE@33958,4HA4A@91061,COG1435@1,COG1435@2 NA|NA|NA F thymidine kinase HOOMBAJD_00786 568703.LGG_01171 4.8e-191 673.7 Lactobacillaceae prfA ko:K02835 ko00000,ko03012 Bacteria 1TQ7V@1239,3F3Q0@33958,4H9MB@91061,COG0216@1,COG0216@2 NA|NA|NA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA HOOMBAJD_00787 568703.LGG_01172 1.7e-156 558.5 Lactobacillaceae prmB GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006304,GO:0006305,GO:0006306,GO:0006464,GO:0006479,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009007,GO:0009008,GO:0009987,GO:0016740,GO:0016741,GO:0018364,GO:0019538,GO:0032259,GO:0032775,GO:0034641,GO:0036009,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0044728,GO:0046483,GO:0071704,GO:0090304,GO:0140096,GO:0140097,GO:1901360,GO:1901564 2.1.1.297,2.1.1.298 ko:K02493,ko:K07320 R10806 RC00003,RC03279 ko00000,ko01000,ko03009,ko03012 Bacteria 1TSMA@1239,3F460@33958,4HC6W@91061,COG2890@1,COG2890@2 NA|NA|NA J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif HOOMBAJD_00788 568703.LGG_01173 1.2e-191 675.6 Lactobacillaceae ywlC GO:0000049,GO:0000166,GO:0002949,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006450,GO:0006725,GO:0006807,GO:0008033,GO:0008144,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0017076,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034470,GO:0034641,GO:0034660,GO:0035639,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0065007,GO:0065008,GO:0070525,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363 2.7.7.87,3.1.3.48 ko:K01104,ko:K07566 R10463 RC00745 ko00000,ko01000,ko03009,ko03016 Bacteria 1TP1I@1239,3F3T1@33958,4HA7W@91061,COG0009@1,COG0009@2 NA|NA|NA J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine HOOMBAJD_00789 568703.LGG_01174 2e-233 814.7 Lactobacillaceae glyA 2.1.2.1 ko:K00600 ko00260,ko00460,ko00630,ko00670,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko01523,map00260,map00460,map00630,map00670,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map01523 M00140,M00141,M00346,M00532 R00945,R09099 RC00022,RC00112,RC01583,RC02958 ko00000,ko00001,ko00002,ko01000 Bacteria 1TQVM@1239,3F4C1@33958,4HA5K@91061,COG0112@1,COG0112@2 NA|NA|NA E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism HOOMBAJD_00790 568703.LGG_01175 4.4e-112 410.6 Lactobacillaceae upp GO:0003674,GO:0003824,GO:0004849,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006213,GO:0006220,GO:0006221,GO:0006222,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008655,GO:0009058,GO:0009112,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009173,GO:0009174,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0018130,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0043094,GO:0043097,GO:0043174,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046049,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.2.9 ko:K00761 ko00240,ko01100,map00240,map01100 R00966 RC00063 ko00000,ko00001,ko01000 iSB619.SA_RS11010 Bacteria 1TPMT@1239,3F4M0@33958,4H9Y0@91061,COG0035@1,COG0035@2 NA|NA|NA F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate HOOMBAJD_00791 568703.LGG_01177 3.9e-125 454.1 Lactobacillaceae atpB GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0005887,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016021,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0031224,GO:0031226,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0042777,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045260,GO:0045263,GO:0045264,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 ko:K02108 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00157 ko00000,ko00001,ko00002,ko00194,ko03110 3.A.2.1 iAPECO1_1312.APECO1_2725,iE2348C_1286.E2348C_4048,iEC042_1314.EC042_4125,iECABU_c1320.ECABU_c42230,iECED1_1282.ECED1_4428,iECIAI39_1322.ECIAI39_4342,iECNA114_1301.ECNA114_3887,iECOK1_1307.ECOK1_4187,iECP_1309.ECP_3937,iECS88_1305.ECS88_4160,iECSF_1327.ECSF_3586,iECUMN_1333.ECUMN_4268,iEcSMS35_1347.EcSMS35_4106,iLF82_1304.LF82_0192,iNRG857_1313.NRG857_18615,iUMN146_1321.UM146_18880,iUMNK88_1353.UMNK88_4550,iUTI89_1310.UTI89_C4293,ic_1306.c4666 Bacteria 1TQIT@1239,3F3RE@33958,4H9NV@91061,COG0356@1,COG0356@2 NA|NA|NA C it plays a direct role in the translocation of protons across the membrane HOOMBAJD_00792 568703.LGG_01178 1.6e-26 124.8 Lactobacillaceae atpE GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 ko:K02110 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00157 ko00000,ko00001,ko00002,ko00194 3.A.2.1 Bacteria 1VEHP@1239,3F82A@33958,4HNKQ@91061,COG0636@1,COG0636@2 NA|NA|NA C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation HOOMBAJD_00793 568703.LGG_01179 1.3e-39 169.5 Lactobacillaceae atpF ko:K02109 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00157 ko00000,ko00001,ko00002,ko00194 3.A.2.1 iHN637.CLJU_RS01170,iYO844.BSU36850 Bacteria 1VB85@1239,3F5M8@33958,4HM64@91061,COG0711@1,COG0711@2 NA|NA|NA C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) HOOMBAJD_00794 568703.LGG_01180 2.9e-88 331.3 Lactobacillaceae atpH GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0030312,GO:0040007,GO:0044464,GO:0071944 ko:K02109,ko:K02113 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00157 ko00000,ko00001,ko00002,ko00194 3.A.2.1 Bacteria 1VAG3@1239,3F5TZ@33958,4HKFW@91061,COG0712@1,COG0712@2 NA|NA|NA C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation HOOMBAJD_00795 568703.LGG_01181 7.2e-286 989.2 Lactobacillaceae atpA GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030312,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0040007,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045260,GO:0045261,GO:0045262,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 3.6.3.14 ko:K02111 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00157 ko00000,ko00001,ko00002,ko00194,ko01000 3.A.2.1 iIT341.HP1134,iSB619.SA_RS10975,iSbBS512_1146.SbBS512_E4187 Bacteria 1TNZ8@1239,3F3R4@33958,4HAMZ@91061,COG0056@1,COG0056@2 NA|NA|NA C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit HOOMBAJD_00796 568703.LGG_01182 1.2e-163 582.4 Lactobacillaceae atpG GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K02115 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00157 ko00000,ko00001,ko00002,ko00194 3.A.2.1 iLJ478.TM1611,iSB619.SA_RS10970,iYO844.BSU36820 Bacteria 1TPBX@1239,3F40E@33958,4HB0E@91061,COG0224@1,COG0224@2 NA|NA|NA C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex HOOMBAJD_00797 568703.LGG_00891 2.5e-10 70.9 Lactobacillaceae Bacteria 1U8CV@1239,2BT3F@1,32N80@2,3FAUG@33958,4IIAU@91061 NA|NA|NA HOOMBAJD_00798 568703.LGG_01184 1.2e-248 865.5 Lactobacillaceae atpD 3.6.3.14 ko:K02112 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00157 ko00000,ko00001,ko00002,ko00194,ko01000 3.A.2.1 iSB619.SA_RS10965 Bacteria 1TPGF@1239,3F3TF@33958,4HAT6@91061,COG0055@1,COG0055@2 NA|NA|NA C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits HOOMBAJD_00799 568703.LGG_01185 1.6e-52 212.2 Lactobacillaceae atpC GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045260,GO:0045261,GO:0045262,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 ko:K02114 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00157 ko00000,ko00001,ko00002,ko00194 3.A.2.1 iJN746.PP_5412,iSbBS512_1146.SbBS512_E4190 Bacteria 1VA89@1239,3F6I6@33958,4HKHS@91061,COG0355@1,COG0355@2 NA|NA|NA C Produces ATP from ADP in the presence of a proton gradient across the membrane HOOMBAJD_00800 568703.LGG_00891 3.4e-13 80.9 Lactobacillaceae Bacteria 1U8CV@1239,2BT3F@1,32N80@2,3FAUG@33958,4IIAU@91061 NA|NA|NA HOOMBAJD_00801 1423732.BALS01000006_gene669 6.4e-32 142.9 Lactobacillaceae ywzB Bacteria 1U2FR@1239,3F8YA@33958,4IC1C@91061,COG4836@1,COG4836@2 NA|NA|NA S Protein of unknown function (DUF1146) HOOMBAJD_00802 568703.LGG_01188 4.5e-180 637.1 Lactobacillaceae mbl ko:K03569 ko00000,ko02048,ko03036,ko04812 1.A.33.1,9.B.157.1 Bacteria 1TP51@1239,3F463@33958,4HA4S@91061,COG1077@1,COG1077@2 NA|NA|NA D Cell shape determining protein MreB Mrl HOOMBAJD_00803 568703.LGG_01189 3.2e-25 120.2 Lactobacillaceae epuA Bacteria 1VMAH@1239,2EK0E@1,33DQZ@2,3F8Q0@33958,4I4NP@91061 NA|NA|NA S DNA-directed RNA polymerase subunit beta HOOMBAJD_00804 568703.LGG_01190 1.6e-54 218.4 Lactobacillaceae yidD ko:K08998 ko00000 Bacteria 1VEIG@1239,3F7H1@33958,4HPA3@91061,COG0759@1,COG0759@2 NA|NA|NA S Could be involved in insertion of integral membrane proteins into the membrane HOOMBAJD_00805 1423816.BACQ01000017_gene611 1.3e-31 141.7 Lactobacillaceae Bacteria 1U6GX@1239,2BQ47@1,30ACR@2,3F7W8@33958,4IG94@91061 NA|NA|NA S Protein of unknown function (DUF2969) HOOMBAJD_00806 568703.LGG_01192 7.6e-222 776.2 Lactobacillaceae rodA ko:K05837 ko00000,ko03036 Bacteria 1TPGH@1239,3F4J4@33958,4HAV4@91061,COG0772@1,COG0772@2 NA|NA|NA D Belongs to the SEDS family HOOMBAJD_00807 568703.LGG_01193 1.1e-47 195.7 Lactobacillaceae gcvH ko:K02437 ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200 M00532 R01221 RC00022,RC02834 ko00000,ko00001,ko00002 Bacteria 1V6WV@1239,3F7WB@33958,4HIMA@91061,COG0509@1,COG0509@2 NA|NA|NA E glycine cleavage HOOMBAJD_00808 568703.LGG_01194 2.1e-213 748.0 Lactobacillaceae argE 3.5.1.18 ko:K01439 ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230 M00016 R02734 RC00064,RC00090 ko00000,ko00001,ko00002,ko01000 Bacteria 1TPMJ@1239,3F3N9@33958,4HB39@91061,COG0624@1,COG0624@2 NA|NA|NA E succinyl-diaminopimelate desuccinylase HOOMBAJD_00809 568703.LGG_01195 9.4e-147 526.2 Lactobacillaceae ko:K02073 ko02010,map02010 M00238 ko00000,ko00001,ko00002,ko02000 3.A.1.24 Bacteria 1TQAS@1239,3F3WP@33958,4HCTA@91061,COG1464@1,COG1464@2 NA|NA|NA P Belongs to the nlpA lipoprotein family HOOMBAJD_00810 568703.LGG_01196 3.8e-148 530.8 Lactobacillaceae ko:K02073 ko02010,map02010 M00238 ko00000,ko00001,ko00002,ko02000 3.A.1.24 Bacteria 1TQAS@1239,3F3WP@33958,4HCTA@91061,COG1464@1,COG1464@2 NA|NA|NA P Belongs to the nlpA lipoprotein family HOOMBAJD_00811 568703.LGG_01197 1e-185 656.0 Lactobacillaceae metN ko:K02071 ko02010,map02010 M00238 ko00000,ko00001,ko00002,ko02000 3.A.1.24 Bacteria 1TPPN@1239,3F3U5@33958,4H9VX@91061,COG1135@1,COG1135@2 NA|NA|NA P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system HOOMBAJD_00812 568703.LGG_01198 8.8e-106 389.8 Lactobacillaceae metI ko:K02072 ko02010,map02010 M00238 ko00000,ko00001,ko00002,ko02000 3.A.1.24 Bacteria 1TRSY@1239,3F48A@33958,4HBEV@91061,COG2011@1,COG2011@2 NA|NA|NA P ABC transporter permease HOOMBAJD_00813 568703.LGG_01199 1.9e-141 508.4 Lactobacillaceae sufC GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006790,GO:0008150,GO:0008152,GO:0009314,GO:0009628,GO:0009987,GO:0016043,GO:0016226,GO:0022607,GO:0031163,GO:0044085,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051186,GO:0071840 ko:K09013 ko00000,ko02000 iECH74115_1262.ECH74115_2396,iECIAI1_1343.ECIAI1_1734,iECIAI39_1322.ECIAI39_1376,iECSP_1301.ECSP_2249,iECs_1301.ECs2389,iEcSMS35_1347.EcSMS35_1514,iG2583_1286.G2583_2077,iSFV_1184.SFV_1705,iSFxv_1172.SFxv_1919,iSSON_1240.SSON_1474,iS_1188.S1844,iZ_1308.Z2710 Bacteria 1TQ98@1239,3F3XT@33958,4HAD9@91061,COG0396@1,COG0396@2 NA|NA|NA O FeS assembly ATPase SufC HOOMBAJD_00814 568703.LGG_01200 9.2e-192 676.0 Lactobacillaceae sufD ko:K07033,ko:K09015 ko00000 Bacteria 1TRT0@1239,3F4BR@33958,4HB6W@91061,COG0719@1,COG0719@2 NA|NA|NA O FeS assembly protein SufD HOOMBAJD_00815 568703.LGG_01201 1.7e-221 775.0 Lactobacillaceae csdA 2.8.1.7,4.4.1.16 ko:K01766,ko:K11717 ko00450,ko01100,map00450,map01100 R03599,R11528 RC00961,RC01789,RC02313 ko00000,ko00001,ko01000 Bacteria 1TQ1W@1239,3F3UP@33958,4HA6Z@91061,COG0520@1,COG0520@2 NA|NA|NA E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine HOOMBAJD_00816 568703.LGG_01202 1.1e-77 295.8 Lactobacillaceae nifU GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006807,GO:0006873,GO:0006875,GO:0006879,GO:0008150,GO:0008152,GO:0008198,GO:0009987,GO:0010467,GO:0016740,GO:0016782,GO:0019538,GO:0019725,GO:0030003,GO:0036455,GO:0042592,GO:0043167,GO:0043169,GO:0043170,GO:0044238,GO:0044424,GO:0044464,GO:0046872,GO:0046914,GO:0046916,GO:0048037,GO:0048878,GO:0050801,GO:0051536,GO:0051537,GO:0051539,GO:0051540,GO:0051604,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0065007,GO:0065008,GO:0071704,GO:0097428,GO:0098771,GO:1901564 ko:K04488 ko00000 Bacteria 1V3H9@1239,3F6WP@33958,4HIJ0@91061,COG0822@1,COG0822@2 NA|NA|NA C SUF system FeS assembly protein, NifU family HOOMBAJD_00817 568703.LGG_01203 3.1e-278 963.8 Lactobacillaceae sufB GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016788,GO:0034641,GO:0040007,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:1901360 ko:K07033,ko:K09014 ko00000 Bacteria 1TQ21@1239,3F44I@33958,4HA1Z@91061,COG0719@1,COG0719@2 NA|NA|NA O assembly protein SufB HOOMBAJD_00818 568703.LGG_01204 1.8e-26 124.4 Lactobacillaceae Bacteria 1U84C@1239,29QHS@1,30BH8@2,3FAIG@33958,4II1T@91061 NA|NA|NA HOOMBAJD_00819 568703.LGG_01205 1.1e-65 255.8 Lactobacillaceae yueI Bacteria 1V8ID@1239,3F7A5@33958,4HJTQ@91061,COG5506@1,COG5506@2 NA|NA|NA S Protein of unknown function (DUF1694) HOOMBAJD_00820 568703.LGG_01206 4e-181 640.6 Lactobacillaceae Bacteria 1V3Z9@1239,29SNM@1,30DU7@2,3F3VM@33958,4HHKX@91061 NA|NA|NA S Protein of unknown function (DUF2785) HOOMBAJD_00821 568703.LGG_01207 4.4e-158 563.9 Lactobacillaceae 2.3.1.19 ko:K00634,ko:K07729 ko00650,ko01100,map00650,map01100 R01174 RC00004,RC02816 ko00000,ko00001,ko01000,ko03000 Bacteria 1VMYH@1239,3F5QH@33958,4ISF0@91061,COG1476@1,COG1476@2 NA|NA|NA K Helix-turn-helix XRE-family like proteins HOOMBAJD_00822 568703.LGG_01208 1.5e-83 315.5 Lactobacillaceae usp6 ko:K03499,ko:K06149 ko00000,ko02000 2.A.38.1,2.A.38.4 Bacteria 1V3NY@1239,3F68T@33958,4HIP3@91061,COG0589@1,COG0589@2 NA|NA|NA T universal stress protein HOOMBAJD_00823 568703.LGG_01209 2.4e-38 164.5 Lactobacillaceae Bacteria 1U7ZC@1239,2BNXR@1,32HMR@2,3FACP@33958,4IHWQ@91061 NA|NA|NA HOOMBAJD_00824 568703.LGG_01211 1.2e-236 825.5 Lactobacillaceae rarA ko:K07478 ko00000 Bacteria 1TPVV@1239,3F3WF@33958,4HAIS@91061,COG2256@1,COG2256@2 NA|NA|NA L recombination factor protein RarA HOOMBAJD_00825 568703.LGG_01213 0.0 1237.2 Lactobacillaceae 6.3.2.2,6.3.2.4 ko:K01919,ko:K01921 ko00270,ko00473,ko00480,ko00550,ko01100,ko01502,map00270,map00473,map00480,map00550,map01100,map01502 M00118 R00894,R01150,R10993 RC00064,RC00090,RC00141 ko00000,ko00001,ko00002,ko01000,ko01011 Bacteria 1UJ6D@1239,3FBXN@33958,4ITSZ@91061,COG1181@1,COG1181@2 NA|NA|NA M Mur ligase middle domain protein HOOMBAJD_00826 568703.LGG_01214 1.7e-72 278.5 Lactobacillaceae yueI Bacteria 1VFCV@1239,3F64D@33958,4HNNE@91061,COG5506@1,COG5506@2 NA|NA|NA S Protein of unknown function (DUF1694) HOOMBAJD_00827 568703.LGG_01215 1.3e-105 389.0 Lactobacillaceae yktB Bacteria 1UY83@1239,3F62K@33958,4HEDB@91061,COG4493@1,COG4493@2 NA|NA|NA S Belongs to the UPF0637 family HOOMBAJD_00828 568703.LGG_01216 2.2e-122 444.9 Lactobacillaceae sdaAB 4.3.1.17 ko:K01752 ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230 R00220,R00590 RC00331,RC02600 ko00000,ko00001,ko01000 Bacteria 1U8TZ@1239,3F4UB@33958,4HBD6@91061,COG1760@1,COG1760@2 NA|NA|NA E Serine dehydratase beta chain HOOMBAJD_00829 568703.LGG_01217 7.3e-150 536.6 Lactobacillaceae sdaAA 4.3.1.17 ko:K01752 ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230 R00220,R00590 RC00331,RC02600 ko00000,ko00001,ko01000 Bacteria 1TP79@1239,3F3X8@33958,4HAI1@91061,COG1760@1,COG1760@2 NA|NA|NA E L-serine dehydratase, iron-sulfur-dependent, alpha subunit HOOMBAJD_00830 568703.LGG_01218 1e-122 446.0 Lactobacillaceae Bacteria 1U7EB@1239,3F9GU@33958,4IHA7@91061,COG0406@1,COG0406@2 NA|NA|NA G Phosphoglycerate mutase family HOOMBAJD_00831 568703.LGG_01219 2.8e-154 551.2 Lactobacillaceae msrA 1.8.4.11,1.8.4.12 ko:K07304,ko:K12267 ko00000,ko01000 Bacteria 1TS05@1239,3FC52@33958,4HAPI@91061,COG0225@1,COG0225@2 NA|NA|NA O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine HOOMBAJD_00832 568703.LGG_01220 9.9e-169 599.4 Lactobacillaceae Bacteria 1VSDG@1239,3FB7Z@33958,4HUM6@91061,COG1028@1,COG1028@2 NA|NA|NA IQ NAD dependent epimerase/dehydratase family HOOMBAJD_00833 568703.LGG_01221 2.7e-137 494.6 Lactobacillaceae pnuC ko:K03811 ko00000,ko02000 4.B.1.1 Bacteria 1VE5T@1239,3F3MB@33958,4HMNW@91061,COG3201@1,COG3201@2 NA|NA|NA H nicotinamide mononucleotide transporter HOOMBAJD_00834 568703.LGG_01222 8.9e-133 479.6 Lactobacillaceae dck 2.7.1.74 ko:K00893 ko00230,ko00240,ko01100,map00230,map00240,map01100 R00185,R01666 RC00002,RC00017 ko00000,ko00001,ko01000 Bacteria 1TPJ1@1239,3F488@33958,4HA9N@91061,COG1428@1,COG1428@2 NA|NA|NA F deoxynucleoside kinase HOOMBAJD_00835 568703.LGG_01223 4.4e-157 560.5 Lactobacillaceae hisK 3.1.3.15 ko:K04486 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 M00026 R03013 RC00017 ko00000,ko00001,ko00002,ko01000 Bacteria 1V77D@1239,3F6HU@33958,4HHQX@91061,COG1387@1,COG1387@2 NA|NA|NA E Histidinol phosphatase and related hydrolases of the PHP family HOOMBAJD_00836 568703.LGG_01224 0.0 1082.8 Lactobacillaceae oppA ko:K02035,ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 M00239,M00439 ko00000,ko00001,ko00002,ko02000 3.A.1.5,3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25 Bacteria 1TNYQ@1239,3F3JE@33958,4HAMK@91061,COG4166@1,COG4166@2 NA|NA|NA E ABC transporter, substratebinding protein HOOMBAJD_00837 568703.LGG_01225 7.4e-153 546.6 Lactobacillaceae Bacteria 1UZKD@1239,3FBXA@33958,4ITNE@91061,COG0642@1,COG2205@2 NA|NA|NA T GHKL domain HOOMBAJD_00838 568703.LGG_01226 9.5e-121 439.5 Lactobacillaceae Bacteria 1UYA6@1239,3F6RJ@33958,4IQ4T@91061,COG0745@1,COG0745@2 NA|NA|NA T Transcriptional regulatory protein, C terminal HOOMBAJD_00839 568703.LGG_01227 1.2e-166 592.4 Lactobacillaceae bcrA ko:K01990 M00254 ko00000,ko00002,ko02000 3.A.1 Bacteria 1TPBQ@1239,3FC3R@33958,4HAGA@91061,COG1131@1,COG1131@2 NA|NA|NA V AAA domain, putative AbiEii toxin, Type IV TA system HOOMBAJD_00840 568703.LGG_01228 1.4e-128 465.7 Lactobacillaceae ko:K01992 M00254 ko00000,ko00002,ko02000 3.A.1 Bacteria 1VMES@1239,2EGU7@1,33AKD@2,3F7PT@33958,4HXVU@91061 NA|NA|NA S ABC-2 family transporter protein HOOMBAJD_00841 568703.LGG_01229 9.4e-161 572.8 Lactobacillaceae Bacteria 1TP77@1239,3F3VP@33958,4HAZB@91061,COG0583@1,COG0583@2 NA|NA|NA K Transcriptional regulator HOOMBAJD_00842 568703.LGG_01230 1.6e-78 298.5 Lactobacillaceae yphH Bacteria 1V3TP@1239,3FBIH@33958,4HWR6@91061,COG1917@1,COG1917@2 NA|NA|NA S Cupin domain HOOMBAJD_00843 568703.LGG_01231 4.2e-55 220.3 Lactobacillaceae yphJ 4.1.1.44 ko:K01607 ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220 R03470 RC00938 ko00000,ko00001,ko01000 Bacteria 1VY4M@1239,3FBIK@33958,4IQRM@91061,COG0599@1,COG0599@2 NA|NA|NA S Carboxymuconolactone decarboxylase family HOOMBAJD_00844 1423816.BACQ01000015_gene571 2.7e-36 157.9 Lactobacillaceae Bacteria 1U6YC@1239,29PRG@1,30APP@2,3F8Q6@33958,4IGSI@91061 NA|NA|NA HOOMBAJD_00845 568703.LGG_01232 4.6e-26 123.6 Lactobacillaceae Bacteria 1TSHF@1239,3F6S2@33958,4HFC7@91061,COG2207@1,COG2207@2 NA|NA|NA K Psort location Cytoplasmic, score HOOMBAJD_00846 1423732.BALS01000020_gene378 1.8e-133 482.3 Lactobacillaceae 1.6.5.5 ko:K00344 ko00000,ko01000 Bacteria 1UYWR@1239,3F5V1@33958,4HDC6@91061,COG0604@1,COG0604@2 NA|NA|NA C Zinc-binding dehydrogenase HOOMBAJD_00847 1423732.BALS01000020_gene379 3.2e-88 331.3 Bacilli Bacteria 1TYDG@1239,4HDFC@91061,COG1028@1,COG1028@2 NA|NA|NA IQ Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) HOOMBAJD_00848 568703.LGG_01233 2e-163 581.6 Lactobacillaceae 2.3.1.128 ko:K03789,ko:K03827 ko00000,ko01000,ko03009 Bacteria 1V7Z2@1239,3F7HG@33958,4HPF8@91061,COG0454@1,COG0456@2 NA|NA|NA K Acetyltransferase (GNAT) domain HOOMBAJD_00849 568703.LGG_01234 1.7e-59 235.0 Lactobacillaceae Bacteria 1UI2W@1239,3F8D7@33958,4ISXQ@91061,COG0454@1,COG0456@2 NA|NA|NA K Acetyltransferase (GNAT) domain HOOMBAJD_00850 568703.LGG_01235 7.4e-155 553.1 Lactobacillaceae Bacteria 1TYCV@1239,3F572@33958,4HD8F@91061,COG1307@1,COG1307@2 NA|NA|NA S Uncharacterised protein, DegV family COG1307 HOOMBAJD_00851 1215915.BN193_05645 1.6e-97 363.2 Lactococcus Bacteria 1VWHB@1239,1YCF2@1357,4HW71@91061,COG0477@1,COG2814@2 NA|NA|NA EGP Transmembrane secretion effector HOOMBAJD_00853 568703.LGG_01523 3e-71 275.0 Bacilli Bacteria 1TTBV@1239,4HBWT@91061,COG4733@1,COG4733@2,COG4926@1,COG4926@2 NA|NA|NA S cellulase activity HOOMBAJD_00854 568703.LGG_01524 1.6e-221 775.8 Bacteria Bacteria COG4722@1,COG4722@2 NA|NA|NA HOOMBAJD_00855 543734.LCABL_13400 1.4e-297 1029.2 Lactobacillaceae Z012_10445 Bacteria 1TQ28@1239,3F5K4@33958,4HAFE@91061,COG5283@1,COG5283@2,COG5412@1,COG5412@2 NA|NA|NA D Phage tail tape measure protein HOOMBAJD_00856 543734.LCABL_13390 5e-57 226.9 Lactobacillaceae Bacteria 1VKIN@1239,2EHS8@1,33BHZ@2,3F7N3@33958,4HR6E@91061 NA|NA|NA HOOMBAJD_00857 543734.LCABL_13380 7.9e-52 209.5 Lactobacillaceae Bacteria 1VHHD@1239,2EBTF@1,333J2@2,3FBPF@33958,4HQFJ@91061 NA|NA|NA S Phage tail assembly chaperone protein, TAC HOOMBAJD_00858 543734.LCABL_13370 2.5e-96 358.2 Lactobacillaceae Bacteria 1VUVY@1239,2F0XZ@1,33TZM@2,3F76N@33958,4HVU9@91061 NA|NA|NA S Phage tail tube protein HOOMBAJD_00859 543734.LCABL_13360 2.9e-69 267.7 Lactobacillaceae Bacteria 1VMSE@1239,2EIM8@1,33CCI@2,3F7YS@33958,4HRDA@91061 NA|NA|NA S Protein of unknown function (DUF3168) HOOMBAJD_00860 543734.LCABL_13350 1.4e-57 228.8 Lactobacillaceae Bacteria 1VFPA@1239,2CIV5@1,32ZS6@2,3F8P3@33958,4HQWN@91061 NA|NA|NA S Bacteriophage HK97-gp10, putative tail-component HOOMBAJD_00861 568703.LGG_01131 4.8e-48 196.8 Lactobacillaceae Bacteria 1VIHK@1239,2E86K@1,332JW@2,3F8A2@33958,4HZJB@91061 NA|NA|NA HOOMBAJD_00862 543734.LCABL_13330 6.1e-61 240.0 Lactobacillaceae Bacteria 1VN9C@1239,2EKJJ@1,33E9D@2,3F7K9@33958,4HR20@91061 NA|NA|NA S Phage gp6-like head-tail connector protein HOOMBAJD_00863 543734.LCABL_13320 3.9e-151 540.8 Bacilli Bacteria 1UYR8@1239,28K9K@1,2Z9X3@2,4HENS@91061 NA|NA|NA HOOMBAJD_00864 543734.LCABL_13300 1.6e-183 648.7 Lactobacillaceae Bacteria 1TSI8@1239,2DB75@1,2Z7JY@2,3F5Z9@33958,4IRVK@91061 NA|NA|NA S Phage major capsid protein E HOOMBAJD_00865 543734.LCABL_13280 1.2e-46 192.2 Lactobacillaceae Bacteria 1VK8N@1239,2EHA7@1,33B23@2,3F87M@33958,4HXXJ@91061 NA|NA|NA HOOMBAJD_00866 543734.LCABL_13270 1.9e-62 245.7 Lactobacillaceae Bacteria 1VEET@1239,2DNT1@1,32YZX@2,3F7QQ@33958,4HQ00@91061 NA|NA|NA S Domain of unknown function (DUF4355) HOOMBAJD_00869 543734.LCABL_13260 3.6e-177 627.5 Lactobacillaceae Bacteria 1U6KJ@1239,3F3Z8@33958,4HGZW@91061,COG2369@1,COG2369@2 NA|NA|NA S head morphogenesis protein, SPP1 gp7 family HOOMBAJD_00870 543734.LCABL_13250 6.4e-255 886.3 Lactobacillaceae Bacteria 1TR67@1239,2DB9U@1,2Z7Z6@2,3FB8U@33958,4HCTZ@91061 NA|NA|NA S Phage portal protein HOOMBAJD_00871 543734.LCABL_13240 1.2e-246 858.6 Lactobacillaceae Bacteria 1TT2C@1239,3F3NN@33958,4H9S2@91061,COG1783@1,COG1783@2 NA|NA|NA S Terminase-like family HOOMBAJD_00872 543734.LCABL_13230 2.9e-78 298.1 Lactobacillaceae ps333 ko:K07474 ko00000 Bacteria 1VAD9@1239,3F6ZJ@33958,4HXMG@91061,COG3728@1,COG3728@2 NA|NA|NA L Terminase small subunit HOOMBAJD_00873 543734.LCABL_05780 6.5e-43 179.9 Lactobacillaceae Bacteria 1U6SS@1239,2BWYP@1,30AJY@2,3F8F9@33958,4IGKB@91061 NA|NA|NA HOOMBAJD_00874 568703.LGG_01122 2.9e-48 198.4 Lactobacillaceae Bacteria 1VEP1@1239,2DR9Y@1,33AUY@2,3F7WJ@33958,4HP3X@91061 NA|NA|NA L NUMOD4 motif HOOMBAJD_00875 568703.LGG_01121 7.8e-216 756.1 Lactobacillaceae Bacteria 1VGE5@1239,2C1BV@1,32ZTD@2,3F9J1@33958,4HPF9@91061 NA|NA|NA S GcrA cell cycle regulator HOOMBAJD_00878 543734.LCABL_05720 1.3e-54 219.2 Bacilli Bacteria 1W51N@1239,2DCNS@1,2ZESF@2,4I1NU@91061 NA|NA|NA HOOMBAJD_00881 1122147.AUEH01000027_gene2756 3.1e-36 157.9 Lactobacillaceae Bacteria 1U7QY@1239,29Q9M@1,30B8Q@2,3FA1A@33958,4IHN8@91061 NA|NA|NA HOOMBAJD_00884 1423732.BALS01000058_gene2831 1.2e-30 139.8 Lactobacillaceae Bacteria 1U7RI@1239,29Q9Z@1,30B93@2,3FA2I@33958,4IHNV@91061 NA|NA|NA S Protein of unknown function (DUF1642) HOOMBAJD_00888 146269.A8YQM7_9CAUD 2.3e-122 444.9 Siphoviridae Viruses 4QC87@10239,4QMER@10699,4QRGW@28883,4QUN8@35237 NA|NA|NA S DNA methylation HOOMBAJD_00889 568703.LGG_01113 9.4e-11 73.6 Lactobacillaceae Bacteria 1VKGS@1239,2DRQ2@1,33CJ8@2,3F9S5@33958,4HS9K@91061 NA|NA|NA HOOMBAJD_00890 39103.U5U799_9CAUD 3e-65 254.2 Siphoviridae Viruses 4QB0C@10239,4QKQC@10699,4QPK3@28883,4QZIU@35237 NA|NA|NA S magnesium ion binding HOOMBAJD_00891 543734.LCABL_13130 1.6e-36 158.3 Lactobacillaceae Bacteria 1U7R2@1239,29Q9N@1,30B8R@2,3FA1N@33958,4IHNC@91061 NA|NA|NA HOOMBAJD_00894 1423732.BALS01000098_gene1433 3e-126 458.0 Lactobacillaceae dnaC 3.4.21.53 ko:K02315,ko:K04076 ko00000,ko01000,ko01002,ko03032 Bacteria 1V36Z@1239,3F6VF@33958,4HXKM@91061,COG1484@1,COG1484@2 NA|NA|NA L IstB-like ATP binding protein HOOMBAJD_00895 220668.lp_0643 3.1e-52 212.2 Lactobacillaceae Bacteria 1V6IW@1239,3FAFI@33958,4HJ9G@91061,COG3935@1,COG3935@2 NA|NA|NA L Domain of unknown function (DUF4373) HOOMBAJD_00896 568703.LGG_01105 1.4e-125 455.7 Lactobacillaceae pi112 3.6.4.12 ko:K03657,ko:K16898 ko03420,ko03430,map03420,map03430 ko00000,ko00001,ko01000,ko03400 Bacteria 1V1UQ@1239,3F51S@33958,4HGSG@91061,COG1074@1,COG1074@2 NA|NA|NA L PDDEXK-like domain of unknown function (DUF3799) HOOMBAJD_00897 568703.LGG_01104 8.1e-141 506.5 Lactobacillaceae recT ko:K07455 ko00000,ko03400 Bacteria 1V0QW@1239,3F47A@33958,4HBS2@91061,COG3723@1,COG3723@2 NA|NA|NA L RecT family HOOMBAJD_00900 543734.LCABL_13030 3.9e-15 86.3 Lactobacillaceae Bacteria 1U8B1@1239,29QME@1,30BM2@2,3FASG@33958,4II91@91061 NA|NA|NA HOOMBAJD_00902 60520.HR47_13630 3.1e-15 88.6 Lactobacillaceae Bacteria 1U6QG@1239,29BQP@1,2ZYP1@2,3F8AX@33958,4IGHP@91061 NA|NA|NA HOOMBAJD_00905 1071400.LBUCD034_0914 2.4e-55 222.2 Lactobacillaceae 3.4.21.88 ko:K01356,ko:K22299 M00729 ko00000,ko00002,ko01000,ko01002,ko03000,ko03400 Bacteria 1VFE1@1239,3FCE4@33958,4HP17@91061,COG1396@1,COG1396@2,COG1974@1,COG1974@2 NA|NA|NA KT Peptidase S24-like HOOMBAJD_00906 911104.AEKT01000044_gene1032 5.7e-14 85.1 Leuconostocaceae Bacteria 1VZ38@1239,29Q09@1,345NW@2,4AYPA@81850,4HYJY@91061 NA|NA|NA HOOMBAJD_00907 1423807.BACO01000025_gene815 6e-50 204.1 Lactobacillaceae Bacteria 1VE35@1239,2DPC1@1,331GC@2,3F66X@33958,4HMP3@91061 NA|NA|NA S Domain of unknown function (DUF4352) HOOMBAJD_00911 543734.LCABL_12920 4.3e-63 247.3 Lactobacillaceae Bacteria 1V1KZ@1239,3F7W7@33958,4I1P9@91061,COG3871@1,COG3871@2 NA|NA|NA S Pyridoxamine 5'-phosphate oxidase HOOMBAJD_00912 543734.LCABL_12910 3e-30 137.1 Lactobacillaceae Bacteria 1U7VR@1239,2AI1X@1,318FN@2,3FA8F@33958,4IHT4@91061 NA|NA|NA HOOMBAJD_00913 1145276.T479_20770 5.5e-112 411.8 Bacilli ko:K06926 ko00000 Bacteria 1UY2I@1239,4HMMX@91061,COG1106@1,COG1106@2 NA|NA|NA S AAA ATPase domain HOOMBAJD_00914 220668.lp_2454 1.6e-83 316.2 Lactobacillaceae dam2 2.1.1.72 ko:K06223 ko03430,map03430 ko00000,ko00001,ko01000,ko02048,ko03032,ko03400 Bacteria 1TPCA@1239,3F6E1@33958,4HF2A@91061,COG0338@1,COG0338@2 NA|NA|NA L DNA methyltransferase HOOMBAJD_00915 1423732.BALS01000070_gene2075 1.5e-90 339.3 Lactobacillaceae Bacteria 1VJ2V@1239,3F4UK@33958,4HPCG@91061,COG0582@1,COG0582@2 NA|NA|NA L Belongs to the 'phage' integrase family HOOMBAJD_00916 1423816.BACQ01000047_gene1771 2.1e-301 1040.8 Lactobacillaceae guaA GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.3.1.128,6.3.5.2 ko:K01951,ko:K03790 ko00230,ko00983,ko01100,map00230,map00983,map01100 M00050 R01230,R01231,R08244 RC00010,RC00204 ko00000,ko00001,ko00002,ko01000,ko01002,ko03009 iLJ478.TM1820 Bacteria 1TPG8@1239,3F3NV@33958,4HA7Q@91061,COG0519@1,COG0519@2 NA|NA|NA F Catalyzes the synthesis of GMP from XMP HOOMBAJD_00917 568703.LGG_01969 4.4e-177 627.1 Lactobacillaceae coaA GO:0003674,GO:0003824,GO:0004594,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.33 ko:K00867 ko00770,ko01100,map00770,map01100 M00120 R02971,R03018,R04391 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 iECDH1ME8569_1439.ECDH1ME8569_3838,iECH74115_1262.ECH74115_5439,iECSE_1348.ECSE_4265,iECSF_1327.ECSF_3833,iECSP_1301.ECSP_5045,iECW_1372.ECW_m4332,iEcDH1_1363.EcDH1_4016,iEcolC_1368.EcolC_4046,iPC815.YPO3758,iSFV_1184.SFV_4047,iSFxv_1172.SFxv_4418,iWFL_1372.ECW_m4332,iZ_1308.Z5545 Bacteria 1TPHJ@1239,3F42Q@33958,4HA4K@91061,COG1072@1,COG1072@2 NA|NA|NA F Pantothenic acid kinase HOOMBAJD_00918 568703.LGG_01970 5e-49 200.3 Lactobacillaceae Bacteria 1U8GV@1239,2BU50@1,32PDW@2,3FAYY@33958,4IIEQ@91061 NA|NA|NA HOOMBAJD_00919 568703.LGG_01971 1e-39 169.1 Lactobacillaceae Bacteria 1U84D@1239,2AHIU@1,317WG@2,3FAIH@33958,4II1U@91061 NA|NA|NA HOOMBAJD_00920 568703.LGG_01972 1.7e-273 948.0 Lactobacillaceae pipD ko:K08659 ko00000,ko01000,ko01002 Bacteria 1TQ0F@1239,3F3M4@33958,4HC3G@91061,COG4690@1,COG4690@2 NA|NA|NA E Dipeptidase HOOMBAJD_00921 568703.LGG_01974 2.1e-82 311.6 Lactobacillaceae ykhA GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006163,GO:0006629,GO:0006631,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009150,GO:0009259,GO:0009987,GO:0016289,GO:0016787,GO:0016788,GO:0016790,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0033865,GO:0033875,GO:0034032,GO:0034641,GO:0035383,GO:0043436,GO:0043603,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0047617,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564 3.1.2.20 ko:K01073 ko00000,ko01000 Bacteria 1V3S2@1239,3F6A3@33958,4HJ0Z@91061,COG1607@1,COG1607@2 NA|NA|NA I Thioesterase superfamily HOOMBAJD_00922 568703.LGG_01975 0.0 1469.5 Lactobacillaceae helD 3.6.4.12 ko:K03657 ko03420,ko03430,map03420,map03430 ko00000,ko00001,ko01000,ko03400 Bacteria 1TP39@1239,3F486@33958,4H9Y5@91061,COG3973@1,COG3973@2 NA|NA|NA L DNA helicase HOOMBAJD_00923 568703.LGG_01977 1e-27 128.6 Lactobacillaceae Bacteria 1U818@1239,2AX78@1,31P5Y@2,3FAEP@33958,4IHYP@91061 NA|NA|NA HOOMBAJD_00924 568703.LGG_01978 0.0 1116.3 Lactobacillaceae yjbQ ko:K03455,ko:K03499 ko00000,ko02000 2.A.37,2.A.38.1,2.A.38.4 Bacteria 1TS32@1239,3F4AZ@33958,4H9Q5@91061,COG0475@1,COG0475@2,COG0569@1,COG0569@2 NA|NA|NA P TrkA C-terminal domain protein HOOMBAJD_00925 568703.LGG_01979 3.2e-180 637.5 Lactobacillaceae pip 3.4.11.5 ko:K01259 ko00330,map00330 R00135 ko00000,ko00001,ko01000,ko01002 Bacteria 1UEDT@1239,3F47H@33958,4HF61@91061,COG2267@1,COG2267@2 NA|NA|NA E Releases the N-terminal proline from various substrates HOOMBAJD_00926 568703.LGG_01980 3.1e-83 314.3 Lactobacillaceae yjhE Bacteria 1TQD1@1239,2C3KP@1,2Z802@2,3F71P@33958,4HBGA@91061 NA|NA|NA S Phage tail protein HOOMBAJD_00927 568703.LGG_01981 2.4e-216 758.1 Lactobacillaceae mntH GO:0008150,GO:0009987,GO:0010035,GO:0010038,GO:0010039,GO:0042221,GO:0050896,GO:0051716,GO:0070887,GO:0071241,GO:0071248,GO:0071281 ko:K03322 ko00000,ko02000 2.A.55.2.6,2.A.55.3 Bacteria 1TPT1@1239,3F49Y@33958,4HAEA@91061,COG1914@1,COG1914@2 NA|NA|NA P H( )-stimulated, divalent metal cation uptake system HOOMBAJD_00928 568703.LGG_01982 1.3e-184 652.1 Lactobacillaceae hemH GO:0003674,GO:0003824,GO:0004325,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.99.1.1,4.99.1.9 ko:K01772 ko00860,ko01100,ko01110,map00860,map01100,map01110 M00121 R00310,R11329 RC01012 ko00000,ko00001,ko00002,ko01000 Bacteria 1TPKF@1239,3F4VU@33958,4HAYG@91061,COG0276@1,COG0276@2 NA|NA|NA H Catalyzes the ferrous insertion into protoporphyrin IX HOOMBAJD_00929 568703.LGG_01983 1.2e-128 465.7 Lactobacillaceae pgm3 Bacteria 1TQWQ@1239,3F524@33958,4HF2N@91061,COG0406@1,COG0406@2 NA|NA|NA G Phosphoglycerate mutase family HOOMBAJD_00930 568703.LGG_01984 2.2e-170 604.7 Lactobacillaceae rhaD GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0008150,GO:0008152,GO:0009056,GO:0016052,GO:0016829,GO:0016830,GO:0016832,GO:0019321,GO:0019323,GO:0044238,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046365,GO:0071704,GO:1901575 4.1.2.17,4.1.2.19,5.1.3.4 ko:K01628,ko:K01629,ko:K03077 ko00040,ko00051,ko00053,ko01100,ko01120,map00040,map00051,map00053,map01100,map01120 M00550 R01785,R02262,R02263,R05850 RC00438,RC00599,RC00603,RC00604,RC01479 ko00000,ko00001,ko00002,ko01000 Bacteria 1TRMG@1239,3F4WZ@33958,4H9QT@91061,COG0235@1,COG0235@2 NA|NA|NA H Catalyzes the reversible cleavage of L-rhamnulose-1- phosphate to dihydroxyacetone phosphate (DHAP) and L-lactaldehyde HOOMBAJD_00931 568703.LGG_01985 0.0 1118.6 Lactobacillaceae ko:K02004 M00258 ko00000,ko00002,ko02000 3.A.1 Bacteria 1TR2D@1239,3F45H@33958,4HAZG@91061,COG0577@1,COG0577@2 NA|NA|NA V FtsX-like permease family HOOMBAJD_00932 568703.LGG_01986 1.4e-136 492.3 Lactobacillaceae cysA ko:K02003 M00258 ko00000,ko00002,ko02000 3.A.1 Bacteria 1TNZG@1239,3F3MG@33958,4H9UT@91061,COG1136@1,COG1136@2 NA|NA|NA V ABC transporter, ATP-binding protein HOOMBAJD_00933 568703.LGG_01987 0.0 1103.6 Lactobacillaceae ko:K20265 ko02024,map02024 ko00000,ko00001,ko02000 2.A.3.7.1,2.A.3.7.3 Bacteria 1VTQI@1239,3FBET@33958,4HU7Y@91061,COG0531@1,COG0531@2 NA|NA|NA E amino acid HOOMBAJD_00934 568703.LGG_01988 5.3e-164 583.6 Lactobacillaceae yegS GO:0001727,GO:0003674,GO:0003824,GO:0006629,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0030258,GO:0044237,GO:0044238,GO:0044255,GO:0046834,GO:0071704 2.7.1.107 ko:K07029 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 R02240 RC00002,RC00017 ko00000,ko00001,ko01000 Bacteria 1V4PN@1239,3F3Z6@33958,4HHJP@91061,COG1597@1,COG1597@2 NA|NA|NA I Diacylglycerol kinase catalytic domain HOOMBAJD_00935 568703.LGG_01989 3.4e-236 823.9 Lactobacillaceae hflX ko:K03665 ko00000,ko03009 Bacteria 1TNZB@1239,3F4B2@33958,4HACA@91061,COG2262@1,COG2262@2 NA|NA|NA S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis HOOMBAJD_00936 568703.LGG_01990 3.6e-153 547.7 Lactobacillaceae nodB3 Bacteria 1TYRH@1239,3FC25@33958,4HHQN@91061,COG0726@1,COG0726@2 NA|NA|NA G Polysaccharide deacetylase HOOMBAJD_00937 1423816.BACQ01000049_gene1810 5.8e-187 660.2 Lactobacillaceae mnaA 5.1.3.14 ko:K01791 ko00520,ko01100,ko05111,map00520,map01100,map05111 M00362 R00420 RC00290 ko00000,ko00001,ko00002,ko01000,ko01005 Bacteria 1TQZT@1239,3F3KQ@33958,4HBI3@91061,COG0381@1,COG0381@2 NA|NA|NA G Belongs to the UDP-N-acetylglucosamine 2-epimerase family HOOMBAJD_00938 944562.HMPREF9102_0212 8.3e-45 187.6 Lactobacillaceae 3.2.1.17 ko:K01185,ko:K02395 ko00000,ko01000,ko02035 Bacteria 1UYRM@1239,3F4XJ@33958,4HAU6@91061,COG1705@1,COG1705@2 NA|NA|NA NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase HOOMBAJD_00941 568703.LGG_01993 3.4e-242 844.0 Bacilli Bacteria 1V536@1239,2A7KX@1,30WIW@2,4HSRR@91061 NA|NA|NA HOOMBAJD_00942 568703.LGG_01994 4.6e-239 833.6 Lactobacillaceae Bacteria 1V536@1239,2A7KX@1,30WIW@2,3F9NV@33958,4HSRR@91061 NA|NA|NA HOOMBAJD_00943 568703.LGG_01995 4.6e-91 340.5 Lactobacillaceae Bacteria 1VQP4@1239,2DU5M@1,33P0X@2,3F9X8@33958,4IHJ2@91061 NA|NA|NA HOOMBAJD_00944 568703.LGG_01996 1e-80 305.8 Lactobacillaceae rfbD 1.1.1.133,5.1.3.13 ko:K00067,ko:K01790 ko00521,ko00523,ko01130,map00521,map00523,map01130 M00793 R02777,R06514 RC00182,RC01531 ko00000,ko00001,ko00002,ko01000 Bacteria 1TP71@1239,3F4QS@33958,4HBXF@91061,COG1091@1,COG1091@2 NA|NA|NA M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose HOOMBAJD_00945 568703.LGG_00911 1e-119 436.0 Lactobacillaceae phoU ko:K02039 ko00000 Bacteria 1URN3@1239,3F46W@33958,4HEU9@91061,COG0704@1,COG0704@2 NA|NA|NA P Plays a role in the regulation of phosphate uptake HOOMBAJD_00946 568703.LGG_00910 2.7e-140 504.6 Lactobacillaceae pstB 3.6.3.27 ko:K02036 ko02010,map02010 M00222 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.7 iLJ478.TM1261 Bacteria 1TP1M@1239,3F3SY@33958,4HAB1@91061,COG1117@1,COG1117@2 NA|NA|NA P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system HOOMBAJD_00947 568703.LGG_00909 6.9e-150 536.6 Lactobacillaceae pstB 3.6.3.27 ko:K02036 ko02010,map02010 M00222 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.7 iLJ478.TM1261 Bacteria 1TP1M@1239,3F3SY@33958,4HAB1@91061,COG1117@1,COG1117@2 NA|NA|NA P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system HOOMBAJD_00948 568703.LGG_00908 1.1e-156 559.3 Lactobacillaceae pstA GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K02038 ko02010,map02010 M00222 ko00000,ko00001,ko00002,ko02000 3.A.1.7 Bacteria 1TP74@1239,3F412@33958,4HAKF@91061,COG0581@1,COG0581@2 NA|NA|NA P Phosphate transport system permease protein PstA HOOMBAJD_00949 568703.LGG_00907 3.4e-161 574.3 Lactobacillaceae pstC GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K02037 ko02010,map02010 M00222 ko00000,ko00001,ko00002,ko02000 3.A.1.7 Bacteria 1TSPP@1239,3F3NI@33958,4HC9H@91061,COG0573@1,COG0573@2 NA|NA|NA P probably responsible for the translocation of the substrate across the membrane HOOMBAJD_00950 568703.LGG_00906 1.2e-155 555.8 Lactobacillaceae pstS GO:0003674,GO:0005488,GO:0006810,GO:0006811,GO:0006817,GO:0006820,GO:0008150,GO:0015698,GO:0042301,GO:0043167,GO:0043168,GO:0051179,GO:0051234 ko:K02040 ko02010,ko02020,ko05152,map02010,map02020,map05152 M00222 ko00000,ko00001,ko00002,ko02000 3.A.1.7 Bacteria 1TQ5X@1239,3F4ER@33958,4HBEB@91061,COG0226@1,COG0226@2 NA|NA|NA P Phosphate HOOMBAJD_00951 568703.LGG_00905 1.9e-303 1047.7 Lactobacillaceae phoR 2.7.13.3 ko:K07636,ko:K07652 ko02020,map02020 M00434,M00459 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Bacteria 1TQ1H@1239,3F3W2@33958,4HB1B@91061,COG5002@1,COG5002@2 NA|NA|NA T Histidine kinase HOOMBAJD_00952 568703.LGG_00904 5.2e-130 470.3 Lactobacillaceae Bacteria 1TPWS@1239,3FC91@33958,4H9KP@91061,COG0745@1,COG0745@2 NA|NA|NA K response regulator HOOMBAJD_00953 568703.LGG_00903 1.9e-195 688.3 Lactobacillaceae minJ Bacteria 1TSBA@1239,3F4TP@33958,4HA05@91061,COG0265@1,COG0265@2 NA|NA|NA O Domain present in PSD-95, Dlg, and ZO-1/2. HOOMBAJD_00954 568703.LGG_00902 1.8e-159 568.5 Lactobacillaceae ftsX GO:0000910,GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0007049,GO:0007154,GO:0007165,GO:0007166,GO:0008150,GO:0008356,GO:0009966,GO:0009987,GO:0010033,GO:0010646,GO:0016020,GO:0016021,GO:0016043,GO:0019221,GO:0022402,GO:0022603,GO:0022607,GO:0023051,GO:0023052,GO:0030312,GO:0031224,GO:0031226,GO:0032506,GO:0034097,GO:0040007,GO:0042173,GO:0042221,GO:0043937,GO:0043938,GO:0044085,GO:0044425,GO:0044459,GO:0044464,GO:0045595,GO:0045597,GO:0045881,GO:0048518,GO:0048522,GO:0048583,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051094,GO:0051301,GO:0051716,GO:0065007,GO:0070098,GO:0070297,GO:0070887,GO:0071310,GO:0071345,GO:0071840,GO:0071944,GO:0090529,GO:1902531 ko:K09811,ko:K09812 ko02010,map02010 M00256 ko00000,ko00001,ko00002,ko02000,ko03036 3.A.1.140 Bacteria 1TPND@1239,3F4MK@33958,4HA5A@91061,COG2177@1,COG2177@2 NA|NA|NA D Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation HOOMBAJD_00955 568703.LGG_00901 1.9e-124 451.8 Lactobacillaceae ftsE GO:0000166,GO:0000910,GO:0003674,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0007049,GO:0008144,GO:0008150,GO:0008356,GO:0009898,GO:0009966,GO:0009987,GO:0010646,GO:0016020,GO:0016043,GO:0017076,GO:0019897,GO:0019898,GO:0022402,GO:0022603,GO:0022607,GO:0023051,GO:0030554,GO:0031234,GO:0032153,GO:0032506,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042173,GO:0042221,GO:0043167,GO:0043168,GO:0043937,GO:0043938,GO:0044085,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045595,GO:0045597,GO:0045881,GO:0046677,GO:0048518,GO:0048522,GO:0048583,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051094,GO:0051301,GO:0065007,GO:0070297,GO:0071840,GO:0071944,GO:0090529,GO:0097159,GO:0097367,GO:0098552,GO:0098562,GO:1901265,GO:1901363,GO:1902531 ko:K09811,ko:K09812 ko02010,map02010 M00256 ko00000,ko00001,ko00002,ko02000,ko03036 3.A.1.140 Bacteria 1TP58@1239,3F4JC@33958,4H9Z2@91061,COG2884@1,COG2884@2 NA|NA|NA D ABC transporter HOOMBAJD_00956 568703.LGG_00900 8.9e-176 622.9 Lactobacillaceae prfB GO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0016149,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 ko:K02836 ko00000,ko03012 Bacteria 1TPSB@1239,3F3SN@33958,4H9N2@91061,COG1186@1,COG1186@2 NA|NA|NA J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA HOOMBAJD_00957 568703.LGG_00899 0.0 1549.6 Lactobacillaceae secA GO:0000166,GO:0002790,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0009306,GO:0009987,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032940,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 ko:K03070 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 ko00000,ko00001,ko00002,ko02044 3.A.5.1,3.A.5.10,3.A.5.2,3.A.5.4 Bacteria 1TPEY@1239,3F4DH@33958,4HA22@91061,COG0653@1,COG0653@2 NA|NA|NA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane HOOMBAJD_00958 568703.LGG_00896 5.4e-98 363.6 Lactobacillaceae hpf GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006417,GO:0006448,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015935,GO:0017148,GO:0019222,GO:0022626,GO:0022627,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0043021,GO:0043022,GO:0043024,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044877,GO:0045900,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0080090,GO:1990904,GO:2000112,GO:2000113 ko:K05808 ko00000,ko03009 Bacteria 1V1D5@1239,3F40M@33958,4HFX9@91061,COG1544@1,COG1544@2 NA|NA|NA J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase HOOMBAJD_00959 568703.LGG_00895 4.8e-90 337.0 Lactobacillaceae comFC ko:K02242 M00429 ko00000,ko00002,ko02044 Bacteria 1V73S@1239,3F714@33958,4HJ6R@91061,COG1040@1,COG1040@2 NA|NA|NA S Competence protein HOOMBAJD_00960 568703.LGG_00894 3.7e-235 820.5 Lactobacillaceae comFA GO:0003674,GO:0003678,GO:0003824,GO:0004003,GO:0004386,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006268,GO:0006270,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032392,GO:0032508,GO:0033554,GO:0034641,GO:0034645,GO:0042623,GO:0043138,GO:0043140,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0046483,GO:0050896,GO:0051276,GO:0051716,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360,GO:1901576 ko:K02240 M00429 ko00000,ko00002,ko02044 3.A.11.1 Bacteria 1TPZE@1239,3F3TQ@33958,4HB00@91061,COG4098@1,COG4098@2 NA|NA|NA L Helicase C-terminal domain protein HOOMBAJD_00961 568703.LGG_00893 1.8e-116 425.2 Lactobacillaceae yvyE 3.4.13.9 ko:K01271 ko00000,ko01000,ko01002 Bacteria 1V6MQ@1239,3F3SQ@33958,4HBIT@91061,COG1739@1,COG1739@2 NA|NA|NA S YigZ family HOOMBAJD_00962 568703.LGG_00892 1.7e-242 845.1 Lactobacillaceae rny GO:0003674,GO:0005488,GO:0005515,GO:0042802 ko:K18682 ko03018,map03018 ko00000,ko00001,ko01000,ko03019 Bacteria 1TP48@1239,3F3WX@33958,4HC9J@91061,COG1418@1,COG1418@2 NA|NA|NA S Endoribonuclease that initiates mRNA decay HOOMBAJD_00963 568703.LGG_00891 2.4e-15 87.4 Lactobacillaceae Bacteria 1U8CV@1239,2BT3F@1,32N80@2,3FAUG@33958,4IIAU@91061 NA|NA|NA HOOMBAJD_00964 568703.LGG_00891 1.8e-11 74.3 Lactobacillaceae Bacteria 1U8CV@1239,2BT3F@1,32N80@2,3FAUG@33958,4IIAU@91061 NA|NA|NA HOOMBAJD_00965 568703.LGG_00889 1.4e-187 662.1 Lactobacillaceae recA GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0008152,GO:0009292,GO:0009294,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0030420,GO:0031668,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0044764,GO:0046483,GO:0050896,GO:0051704,GO:0051716,GO:0071496,GO:0071704,GO:0090304,GO:1901360 ko:K03553 ko03440,map03440 M00729 ko00000,ko00001,ko00002,ko03400 Bacteria 1TPD5@1239,3F3KU@33958,4HAG5@91061,COG0468@1,COG0468@2 NA|NA|NA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage HOOMBAJD_00966 568703.LGG_00888 4.7e-227 793.5 Lactobacillaceae cinA GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363 3.5.1.42 ko:K03742,ko:K03743 ko00760,map00760 R02322 RC00100 ko00000,ko00001,ko01000 Bacteria 1TQ1N@1239,3F4I4@33958,4HATN@91061,COG1058@1,COG1058@2,COG1546@1,COG1546@2 NA|NA|NA S Belongs to the CinA family HOOMBAJD_00967 568703.LGG_00887 1.6e-103 382.1 Lactobacillaceae pgsA GO:0006629,GO:0006644,GO:0006650,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0045017,GO:0046474,GO:0046486,GO:0071704,GO:0090407,GO:1901576 2.7.8.41,2.7.8.5 ko:K00995,ko:K08744 ko00564,ko01100,map00564,map01100 R01801,R02030 RC00002,RC00017,RC02795 ko00000,ko00001,ko01000 iSB619.SA_RS06365 Bacteria 1V6PJ@1239,3F4BI@33958,4HCEX@91061,COG0558@1,COG0558@2 NA|NA|NA I Belongs to the CDP-alcohol phosphatidyltransferase class-I family HOOMBAJD_00968 568703.LGG_00886 2e-116 425.6 Lactobacillaceae ymfM ko:K15539 ko00000 Bacteria 1V1N7@1239,3F3SM@33958,4HKW3@91061,COG1426@1,COG1426@2 NA|NA|NA S Helix-turn-helix domain HOOMBAJD_00969 568703.LGG_00885 1.3e-128 465.7 Lactobacillaceae Bacteria 1V0YW@1239,3FBEA@33958,4ISGK@91061,COG1028@1,COG1028@2 NA|NA|NA IQ Enoyl-(Acyl carrier protein) reductase HOOMBAJD_00970 568703.LGG_00884 4.2e-242 843.6 Lactobacillaceae ymfH ko:K07263 ko00000,ko01000,ko01002 Bacteria 1TP5I@1239,3F4MU@33958,4H9YG@91061,COG0612@1,COG0612@2 NA|NA|NA S Peptidase M16 HOOMBAJD_00971 568703.LGG_00883 6.1e-230 803.1 Lactobacillaceae ymfF Bacteria 1TPN6@1239,3F3SA@33958,4H9P5@91061,COG0612@1,COG0612@2 NA|NA|NA S Peptidase M16 inactive domain protein HOOMBAJD_00972 568703.LGG_00882 0.0 1357.4 Lactobacillaceae ftsK GO:0000003,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0019954,GO:0030436,GO:0031323,GO:0031326,GO:0032502,GO:0043934,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:1903506,GO:2000112,GO:2001141 ko:K03466 ko00000,ko03036 3.A.12 Bacteria 1TPJR@1239,3F3JZ@33958,4H9WA@91061,COG1674@1,COG1674@2 NA|NA|NA D Belongs to the FtsK SpoIIIE SftA family HOOMBAJD_00973 568703.LGG_00891 1.2e-09 68.6 Lactobacillaceae Bacteria 1U8CV@1239,2BT3F@1,32N80@2,3FAUG@33958,4IIAU@91061 NA|NA|NA HOOMBAJD_00974 568703.LGG_00879 5.4e-71 273.5 Lactobacillaceae WQ51_03320 Bacteria 1VJ7H@1239,3F6JB@33958,4HP0P@91061,COG4835@1,COG4835@2 NA|NA|NA S Protein of unknown function (DUF1149) HOOMBAJD_00975 568703.LGG_00878 1.4e-95 355.5 Lactobacillaceae trmL GO:0001510,GO:0002128,GO:0002130,GO:0002131,GO:0002132,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016300,GO:0016427,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042802,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0052665,GO:0052666,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.207 ko:K03216 ko00000,ko01000,ko03016 Bacteria 1V3GW@1239,3F42Y@33958,4HFNY@91061,COG0219@1,COG0219@2 NA|NA|NA J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily HOOMBAJD_00976 568703.LGG_00876 1.8e-153 548.5 Lactobacillaceae rrmA 2.1.1.187 ko:K00563,ko:K10947 R07233 RC00003 ko00000,ko01000,ko03000,ko03009 Bacteria 1V1WE@1239,3F4U3@33958,4HGQ9@91061,COG0500@1,COG2226@2 NA|NA|NA H Methyltransferase HOOMBAJD_00977 568703.LGG_00875 2.2e-171 608.2 Lactobacillaceae corA ko:K03284 ko00000,ko02000 1.A.35.1,1.A.35.3 Bacteria 1TPI8@1239,3F4B8@33958,4HE7S@91061,COG0598@1,COG0598@2 NA|NA|NA P CorA-like Mg2+ transporter protein HOOMBAJD_00978 568703.LGG_00874 7.4e-191 672.9 Lactobacillaceae guaC 1.1.1.205,1.7.1.7 ko:K00088,ko:K00364 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 M00050 R01130,R01134,R08240 RC00143,RC00457,RC02207 ko00000,ko00001,ko00002,ko01000,ko04147 iSB619.SA_RS06660 Bacteria 1TNYF@1239,3F45K@33958,4HA55@91061,COG0516@1,COG0516@2 NA|NA|NA F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides HOOMBAJD_00979 1423732.BALS01000004_gene1205 3.5e-42 177.2 Lactobacillaceae rpsN GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030312,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02954 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1VEF6@1239,3F7KX@33958,4HKK1@91061,COG0199@1,COG0199@2 NA|NA|NA J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site HOOMBAJD_00980 568703.LGG_00872 3e-60 237.7 Lactobacillaceae srlB 2.7.1.198 ko:K02781 ko00051,ko02060,map00051,map02060 M00280 R05820 RC00017,RC03206 ko00000,ko00001,ko00002,ko01000,ko02000 4.A.4.1 Bacteria 1VGKB@1239,3F8EZ@33958,4HNJN@91061,COG3731@1,COG3731@2 NA|NA|NA G PTS system glucitol/sorbitol-specific IIA component HOOMBAJD_00981 568703.LGG_00871 8.6e-198 696.0 Lactobacillaceae pgl GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016787,GO:0016788,GO:0017057,GO:0044424,GO:0044444,GO:0044464,GO:0052689 3.1.1.31 ko:K07404 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200 M00004,M00006,M00008 R02035 RC00537 ko00000,ko00001,ko00002,ko01000 Bacteria 1TQ3J@1239,3F3RC@33958,4HBHB@91061,COG2706@1,COG2706@2 NA|NA|NA G Lactonase, 7-bladed beta-propeller HOOMBAJD_00982 568703.LGG_00870 3.5e-146 524.2 Lactobacillaceae uppP GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016021,GO:0016311,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0031224,GO:0031226,GO:0042221,GO:0044237,GO:0044425,GO:0044459,GO:0044464,GO:0046677,GO:0050380,GO:0050896,GO:0071944 3.6.1.27 ko:K06153 ko00550,map00550 R05627 RC00002 ko00000,ko00001,ko01000,ko01011 iYL1228.KPN_03461 Bacteria 1TPFA@1239,3F510@33958,4HB0M@91061,COG1968@1,COG1968@2 NA|NA|NA V Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin HOOMBAJD_00983 568703.LGG_00869 1.9e-110 405.2 Lactobacillaceae cutC GO:0006873,GO:0006875,GO:0006878,GO:0008150,GO:0009987,GO:0010035,GO:0010038,GO:0019725,GO:0030003,GO:0042221,GO:0042592,GO:0046688,GO:0046916,GO:0048878,GO:0050801,GO:0050896,GO:0055065,GO:0055070,GO:0055076,GO:0055080,GO:0055082,GO:0065007,GO:0065008,GO:0098771 ko:K06201 ko00000 Bacteria 1TQYI@1239,3F4NZ@33958,4HE1E@91061,COG3142@1,COG3142@2 NA|NA|NA P Participates in the control of copper homeostasis HOOMBAJD_00984 568703.LGG_00868 2e-202 711.4 Lactobacillaceae apbE 2.7.1.180 ko:K03734 ko00000,ko01000 Bacteria 1TR9C@1239,3FB4B@33958,4HA6Y@91061,COG1477@1,COG1477@2 NA|NA|NA H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein HOOMBAJD_00985 568703.LGG_00867 1.9e-169 601.7 Lactobacillaceae rluD GO:0000027,GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022607,GO:0022613,GO:0022618,GO:0031118,GO:0034470,GO:0034622,GO:0034641,GO:0034660,GO:0042254,GO:0042255,GO:0042273,GO:0043170,GO:0043412,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:1901360 5.4.99.23,5.4.99.28,5.4.99.29 ko:K06177,ko:K06180 ko00000,ko01000,ko03009,ko03016 iE2348C_1286.E2348C_2868,iECED1_1282.ECED1_3035,iECSF_1327.ECSF_2432 Bacteria 1TS1T@1239,3F4AU@33958,4HBRY@91061,COG0564@1,COG0564@2 NA|NA|NA G Responsible for synthesis of pseudouridine from uracil HOOMBAJD_00986 568703.LGG_00866 1.4e-150 538.9 Lactobacillaceae nadK GO:0000166,GO:0003674,GO:0003824,GO:0003951,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006741,GO:0006753,GO:0006766,GO:0006767,GO:0006769,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008976,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009820,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016776,GO:0017076,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046496,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0051287,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:0097367,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.7.1.23 ko:K00858 ko00760,ko01100,map00760,map01100 R00104 RC00002,RC00078 ko00000,ko00001,ko01000 iEcSMS35_1347.EcSMS35_2767,iHN637.CLJU_RS05480,iLJ478.TM1733,iSB619.SA_RS04895 Bacteria 1TRB3@1239,3F45D@33958,4HB08@91061,COG0061@1,COG0061@2 NA|NA|NA F Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP HOOMBAJD_00987 568703.LGG_00865 2.7e-123 448.0 Lactobacillaceae yjbM 2.7.6.5 ko:K07816 ko00230,map00230 R00429 RC00002,RC00078 ko00000,ko00001,ko01000 Bacteria 1TQ2F@1239,3F452@33958,4HA3Q@91061,COG2357@1,COG2357@2 NA|NA|NA S RelA SpoT domain protein HOOMBAJD_00988 568703.LGG_00864 2.4e-104 384.8 Lactobacillaceae yjbK Bacteria 1TTVM@1239,3F4YS@33958,4I4A3@91061,COG4116@1,COG4116@2 NA|NA|NA S CYTH HOOMBAJD_00989 568703.LGG_00863 1.5e-115 422.2 Lactobacillaceae yjbH GO:0005575,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 Bacteria 1TQ8K@1239,3F6QR@33958,4HAI8@91061,COG2761@1,COG2761@2 NA|NA|NA Q Thioredoxin HOOMBAJD_00990 568703.LGG_00862 4e-206 723.8 Bacilli coiA 3.6.4.12 ko:K03657,ko:K06198 ko03420,ko03430,map03420,map03430 ko00000,ko00001,ko01000,ko03400 Bacteria 1TRGD@1239,4HFP5@91061,COG4469@1,COG4469@2 NA|NA|NA S Competence protein HOOMBAJD_00991 568703.LGG_00861 1.3e-243 848.6 Lactobacillaceae XK27_08635 ko:K09157 ko00000 Bacteria 1TQG8@1239,3F4H2@33958,4HBTU@91061,COG2848@1,COG2848@2 NA|NA|NA S UPF0210 protein HOOMBAJD_00992 568703.LGG_00860 1.5e-37 161.8 Lactobacillaceae gcvR ko:K07166 ko00000 Bacteria 1VENW@1239,3F811@33958,4HNJ4@91061,COG3830@1,COG3830@2 NA|NA|NA T Belongs to the UPF0237 family HOOMBAJD_00993 1423816.BACQ01000026_gene903 7.1e-221 773.1 Lactobacillaceae cpdA Bacteria 1UQCQ@1239,3F483@33958,4HG8Z@91061,COG1409@1,COG1409@2 NA|NA|NA S Calcineurin-like phosphoesterase HOOMBAJD_00994 568703.LGG_00857 3.9e-226 790.4 Lactobacillaceae malY 4.4.1.8 ko:K14155 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 R00782,R01286,R02408,R04941 RC00056,RC00069,RC00382,RC00488,RC00710,RC01245,RC02303 ko00000,ko00001,ko01000,ko01007 Bacteria 1TP5G@1239,3F4JX@33958,4H9PE@91061,COG1168@1,COG1168@2 NA|NA|NA E Aminotransferase, class I HOOMBAJD_00995 568703.LGG_00856 3.1e-86 324.3 Lactobacillaceae btuE 1.11.1.9 ko:K00432 ko00480,ko00590,ko04918,map00480,map00590,map04918 R00274,R07034,R07035 RC00011,RC00982 ko00000,ko00001,ko01000 Bacteria 1V3M3@1239,3F6A9@33958,4HH5Q@91061,COG0386@1,COG0386@2 NA|NA|NA O Belongs to the glutathione peroxidase family HOOMBAJD_00997 568703.LGG_00855 2.6e-95 354.8 Lactobacillaceae FNV0100 Bacteria 1VDM3@1239,3F6RN@33958,4HMI0@91061,COG1051@1,COG1051@2 NA|NA|NA F NUDIX domain HOOMBAJD_00998 568703.LGG_00854 3.6e-138 497.7 Lactobacillaceae nnrD 4.2.1.136,5.1.99.6 ko:K17758,ko:K17759 ko00000,ko01000 Bacteria 1TNZE@1239,3F480@33958,4HBZC@91061,COG0063@1,COG0063@2 NA|NA|NA H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration HOOMBAJD_00999 568703.LGG_00853 3.3e-35 153.7 Lactobacillaceae yhcC ko:K07069 ko00000 Bacteria 1VEIV@1239,3FAC9@33958,4HPKA@91061,COG3478@1,COG3478@2 NA|NA|NA S Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) HOOMBAJD_01000 568703.LGG_00852 9.9e-129 466.1 Lactobacillaceae rsuA GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 5.4.99.19,5.4.99.22 ko:K06178,ko:K06183 ko00000,ko01000,ko03009 Bacteria 1TQZ2@1239,3F41G@33958,4H9VU@91061,COG1187@1,COG1187@2 NA|NA|NA J Belongs to the pseudouridine synthase RsuA family HOOMBAJD_01001 568703.LGG_00851 3.2e-279 967.2 Lactobacillaceae ytgP GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K03328,ko:K06409 ko00000,ko02000 2.A.66.2,2.A.66.2.14 Bacteria 1TNYX@1239,3F404@33958,4H9RY@91061,COG2244@1,COG2244@2 NA|NA|NA S Polysaccharide biosynthesis protein HOOMBAJD_01002 568703.LGG_00848 0.0 1677.9 Lactobacillaceae leuS GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0030312,GO:0034641,GO:0034645,GO:0034660,GO:0040007,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 ko:K01869 ko00970,map00970 M00359,M00360 R03657 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Bacteria 1TP0Y@1239,3F46M@33958,4HAG1@91061,COG0495@1,COG0495@2 NA|NA|NA J Belongs to the class-I aminoacyl-tRNA synthetase family HOOMBAJD_01003 568703.LGG_00847 6.1e-120 436.8 Lactobacillaceae 3.6.1.27 ko:K19302 ko00550,map00550 R05627 RC00002 ko00000,ko00001,ko01000,ko01011 Bacteria 1VF2U@1239,3F5CM@33958,4HNXR@91061,COG0671@1,COG0671@2 NA|NA|NA I Acid phosphatase homologues HOOMBAJD_01004 568703.LGG_00846 1.1e-114 419.5 Lactobacillaceae Bacteria 1VDDQ@1239,2C9UQ@1,32RPZ@2,3F5X9@33958,4HNJB@91061 NA|NA|NA S Domain of unknown function (DUF4811) HOOMBAJD_01005 568703.LGG_00845 1.8e-265 921.4 Lactobacillaceae lmrB Bacteria 1TPRN@1239,3F4A2@33958,4H9VV@91061,COG0477@1,COG2814@2 NA|NA|NA EGP Major facilitator Superfamily HOOMBAJD_01006 568703.LGG_00844 3.9e-81 307.4 Lactobacillaceae merR ko:K21089,ko:K21972,ko:K22491 ko02026,map02026 ko00000,ko00001,ko03000 Bacteria 1VDPP@1239,3F6MS@33958,4HPJY@91061,COG0789@1,COG0789@2 NA|NA|NA K MerR HTH family regulatory protein HOOMBAJD_01007 568703.LGG_00843 6.2e-274 949.5 Lactobacillaceae emrY Bacteria 1VSW8@1239,3F4AW@33958,4HUQC@91061,COG0477@1,COG2814@2 NA|NA|NA EGP Major facilitator Superfamily HOOMBAJD_01008 568703.LGG_00842 1.7e-210 738.4 Lactobacillaceae metK GO:0003674,GO:0003824,GO:0004478,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016740,GO:0016765,GO:0044424,GO:0044444,GO:0044464 2.5.1.6 ko:K00789 ko00270,ko01100,ko01110,ko01230,map00270,map01100,map01110,map01230 M00034,M00035,M00368,M00609 R00177,R04771 RC00021,RC01211 ko00000,ko00001,ko00002,ko01000 Bacteria 1TPCV@1239,3F3T0@33958,4HB33@91061,COG0192@1,COG0192@2 NA|NA|NA H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme HOOMBAJD_01009 568703.LGG_00841 7.5e-99 366.7 Lactobacillaceae Bacteria 1U7D8@1239,29Q2N@1,30B1A@2,3F9EU@33958,4IH94@91061 NA|NA|NA HOOMBAJD_01011 568703.LGG_00644 3.8e-295 1020.0 Lactobacillaceae glpK GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 ko:K00864 ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626 R00847 RC00002,RC00017 ko00000,ko00001,ko01000,ko04147 Bacteria 1TPX3@1239,3F3WI@33958,4H9ZF@91061,COG0554@1,COG0554@2 NA|NA|NA F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate HOOMBAJD_01012 568703.LGG_00643 0.0 1209.1 Lactobacillaceae glpD 1.1.3.21,1.1.5.3 ko:K00105,ko:K00111 ko00564,ko01110,map00564,map01110 R00846,R00848 RC00029 ko00000,ko00001,ko01000 Bacteria 1TQJN@1239,3F5BS@33958,4HAG8@91061,COG0578@1,COG0578@2 NA|NA|NA C C-terminal domain of alpha-glycerophosphate oxidase HOOMBAJD_01013 568703.LGG_00642 3.3e-132 477.6 Lactobacillaceae glpF ko:K02440 ko00000,ko02000 1.A.8.1,1.A.8.2 Bacteria 1TP4T@1239,3F4J6@33958,4HAWP@91061,COG0580@1,COG0580@2 NA|NA|NA U Belongs to the MIP aquaporin (TC 1.A.8) family HOOMBAJD_01014 568703.LGG_00641 2.2e-110 404.8 Lactobacillaceae ung2 3.2.2.27 ko:K21929 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Bacteria 1V1F8@1239,3F4WH@33958,4HFVS@91061,COG1573@1,COG1573@2 NA|NA|NA L Uracil-DNA glycosylase HOOMBAJD_01015 1423816.BACQ01000077_gene2617 1.1e-274 952.2 Lactobacillaceae mutS ko:K03555 ko03430,map03430 ko00000,ko00001,ko03400 Bacteria 1TPJP@1239,3F5Q9@33958,4HD9G@91061,COG0249@1,COG0249@2 NA|NA|NA L ATPase domain of DNA mismatch repair MUTS family HOOMBAJD_01016 568703.LGG_00638 9.1e-311 1072.0 Lactobacillaceae ybiT GO:0006950,GO:0008150,GO:0009266,GO:0009409,GO:0009628,GO:0050896 ko:K06158 ko00000,ko03012 Bacteria 1TPW0@1239,3F3ZJ@33958,4HATH@91061,COG0488@1,COG0488@2 NA|NA|NA S ABC transporter, ATP-binding protein HOOMBAJD_01018 568703.LGG_00636 5.1e-145 520.4 Lactobacillaceae ko:K15051 ko00000 Bacteria 1V4X2@1239,3F3Y8@33958,4HIF5@91061,COG2169@1,COG2169@2 NA|NA|NA F DNA RNA non-specific endonuclease HOOMBAJD_01019 568703.LGG_00635 1.1e-118 432.6 Lactobacillaceae yhiD GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K07507 ko00000,ko02000 9.B.20 Bacteria 1V409@1239,3FB83@33958,4HHDI@91061,COG1285@1,COG1285@2 NA|NA|NA S MgtC family HOOMBAJD_01020 568703.LGG_00634 1.4e-178 632.1 Lactobacillaceae yfeX ko:K07223 ko00000 Bacteria 1UY9Y@1239,3F45Z@33958,4HACQ@91061,COG2837@1,COG2837@2 NA|NA|NA P Peroxidase HOOMBAJD_01021 568703.LGG_00633 3.8e-243 847.0 Lactobacillaceae amt ko:K03320 ko00000,ko02000 1.A.11 Bacteria 1TQYG@1239,3F3X1@33958,4HBGK@91061,COG0004@1,COG0004@2 NA|NA|NA P ammonium transporter HOOMBAJD_01022 568703.LGG_00632 2.6e-158 564.7 Lactobacillaceae 3.5.1.10 ko:K01433 ko00630,ko00670,map00630,map00670 R00944 RC00026,RC00111 ko00000,ko00001,ko01000 Bacteria 1TQ0M@1239,3F3WU@33958,4HA8M@91061,COG0604@1,COG0604@2 NA|NA|NA C nadph quinone reductase HOOMBAJD_01023 568703.LGG_00627 3.1e-92 344.4 Lactobacillaceae nudC 1.3.7.1,3.6.1.22 ko:K03426,ko:K20449 ko00760,ko01100,ko01120,ko04146,map00760,map01100,map01120,map04146 R00103,R03004,R03164,R11104 RC00002,RC02422 ko00000,ko00001,ko01000 Bacteria 1V6WC@1239,3FBGF@33958,4I1JJ@91061,COG2816@1,COG2816@2 NA|NA|NA L NUDIX domain HOOMBAJD_01024 568703.LGG_00625 2.6e-52 211.1 Lactobacillaceae ybjQ Bacteria 1VADM@1239,3F6YC@33958,4HKGZ@91061,COG0393@1,COG0393@2 NA|NA|NA S Belongs to the UPF0145 family HOOMBAJD_01025 568703.LGG_00624 2.3e-116 424.9 Lactobacillaceae cah 4.2.1.1 ko:K01674 ko00910,map00910 R00132,R10092 RC02807 ko00000,ko00001,ko01000 Bacteria 1V16J@1239,3F7DZ@33958,4HA62@91061,COG3338@1,COG3338@2 NA|NA|NA P Eukaryotic-type carbonic anhydrase HOOMBAJD_01026 568703.LGG_00623 1.2e-146 525.8 Lactobacillaceae Bacteria 1VXHZ@1239,3F75V@33958,4HX59@91061,COG4814@1,COG4814@2 NA|NA|NA S Alpha/beta hydrolase of unknown function (DUF915) HOOMBAJD_01027 568703.LGG_00622 4.5e-155 553.9 Lactobacillaceae cylA ko:K01990,ko:K11050 ko02010,map02010 M00254,M00298 ko00000,ko00001,ko00002,ko02000 3.A.1,3.A.1.130 Bacteria 1TPJE@1239,3F58G@33958,4HB5U@91061,COG1131@1,COG1131@2 NA|NA|NA V ABC transporter HOOMBAJD_01028 568703.LGG_00621 5.2e-148 530.4 Lactobacillaceae cylB ko:K11051 ko02010,map02010 M00298 ko00000,ko00001,ko00002,ko02000 3.A.1.130 Bacteria 1TSH0@1239,3FCET@33958,4HJK7@91061,COG0842@1,COG0842@2 NA|NA|NA V ABC-2 type transporter HOOMBAJD_01029 568703.LGG_00620 4.8e-68 263.8 Lactobacillaceae Bacteria 1W04J@1239,3F6TA@33958,4HRMI@91061,COG3279@1,COG3279@2 NA|NA|NA K LytTr DNA-binding domain HOOMBAJD_01030 568703.LGG_00619 2.2e-56 224.9 Lactobacillaceae Bacteria 1W5A8@1239,2C5CN@1,2ZGHZ@2,3F89I@33958,4I240@91061 NA|NA|NA S Protein of unknown function (DUF3021) HOOMBAJD_01031 568703.LGG_00618 0.0 1237.2 Lactobacillaceae yjcE GO:0003674,GO:0005215,GO:0005451,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0006814,GO:0006873,GO:0006885,GO:0008150,GO:0008324,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015079,GO:0015081,GO:0015291,GO:0015297,GO:0015298,GO:0015299,GO:0015318,GO:0015385,GO:0015386,GO:0015491,GO:0015672,GO:0016020,GO:0019725,GO:0022804,GO:0022821,GO:0022857,GO:0022890,GO:0030001,GO:0030003,GO:0030004,GO:0030641,GO:0034220,GO:0035725,GO:0042592,GO:0044464,GO:0046873,GO:0048878,GO:0050801,GO:0051179,GO:0051234,GO:0051453,GO:0055067,GO:0055080,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071804,GO:0071805,GO:0071944,GO:0098655,GO:0098657,GO:0098659,GO:0098660,GO:0098662,GO:0098719,GO:0098739,GO:0098771,GO:0099516,GO:0099587,GO:1902600 ko:K03316 ko00000 2.A.36 Bacteria 1TR4G@1239,3F42V@33958,4HBJR@91061,COG0025@1,COG0025@2 NA|NA|NA P Sodium proton antiporter HOOMBAJD_01032 568703.LGG_00617 2e-284 984.9 Lactobacillaceae Bacteria 1U6PG@1239,29PJG@1,30AHM@2,3F896@33958,4IGGF@91061 NA|NA|NA S Protein of unknown function (DUF3800) HOOMBAJD_01033 568703.LGG_00616 1.5e-253 881.7 Lactobacillaceae yifK GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K03293 ko00000 2.A.3.1 Bacteria 1TP97@1239,3F3YD@33958,4H9QX@91061,COG1113@1,COG1113@2 NA|NA|NA E Amino acid permease HOOMBAJD_01034 568703.LGG_00615 8.2e-160 569.7 Lactobacillaceae yeaE Bacteria 1VSK5@1239,3FBX5@33958,4HT3F@91061,COG0656@1,COG0656@2 NA|NA|NA S Aldo/keto reductase family HOOMBAJD_01035 568703.LGG_00614 3.9e-113 414.1 Lactobacillaceae ylbE Bacteria 1TQFS@1239,3F521@33958,4HDA2@91061,COG0702@1,COG0702@2 NA|NA|NA GM NAD(P)H-binding HOOMBAJD_01036 568703.LGG_00612 2.5e-283 980.7 Lactobacillaceae lsa ko:K06158,ko:K19350 ko02010,map02010 ko00000,ko00001,ko01504,ko02000,ko03012 3.A.1.121 Bacteria 1TNYS@1239,3F53D@33958,4HBFK@91061,COG0488@1,COG0488@2 NA|NA|NA S ABC transporter HOOMBAJD_01037 568703.LGG_00611 3.5e-76 290.8 Lactobacillaceae Bacteria 1VBJ0@1239,3F664@33958,4HNBY@91061,COG1764@1,COG1764@2 NA|NA|NA O OsmC-like protein HOOMBAJD_01038 568703.LGG_00610 2e-68 265.0 Lactobacillaceae Bacteria 1U6ED@1239,29PCC@1,30AAK@2,3F7QE@33958,4IG65@91061 NA|NA|NA HOOMBAJD_01039 1423732.BALS01000009_gene740 4.6e-31 139.8 Lactobacillaceae ko:K03704 ko00000,ko03000 Bacteria 1VEE0@1239,3F7RG@33958,4HNJC@91061,COG1278@1,COG1278@2 NA|NA|NA K 'Cold-shock' DNA-binding domain HOOMBAJD_01040 568703.LGG_00607 1.1e-250 872.1 Lactobacillaceae gdhA 1.4.1.4 ko:K00262 ko00220,ko00250,ko00910,ko01100,map00220,map00250,map00910,map01100 R00248 RC00006,RC02799 ko00000,ko00001,ko01000 Bacteria 1TP45@1239,3F4DS@33958,4HAEI@91061,COG0334@1,COG0334@2 NA|NA|NA E Belongs to the Glu Leu Phe Val dehydrogenases family HOOMBAJD_01041 568703.LGG_00606 2.5e-172 611.3 Lactobacillaceae ldh 1.1.1.27 ko:K00016 ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922 R00703,R01000,R03104 RC00031,RC00044 ko00000,ko00001,ko01000,ko04147 Bacteria 1TPSY@1239,3F4MZ@33958,4HB0Z@91061,COG0039@1,COG0039@2 NA|NA|NA C lactate/malate dehydrogenase, alpha/beta C-terminal domain HOOMBAJD_01042 568703.LGG_00605 3e-268 930.6 Lactobacillaceae yfnA ko:K03294 ko00000 2.A.3.2 Bacteria 1TQ4K@1239,3F3QY@33958,4HA66@91061,COG0531@1,COG0531@2 NA|NA|NA E Amino Acid HOOMBAJD_01043 568703.LGG_00604 6.9e-213 746.5 Lactobacillaceae sstT GO:0003333,GO:0003674,GO:0005215,GO:0005283,GO:0005295,GO:0005310,GO:0005342,GO:0005343,GO:0005416,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006814,GO:0006820,GO:0006835,GO:0006865,GO:0008150,GO:0008324,GO:0008509,GO:0008514,GO:0015075,GO:0015077,GO:0015081,GO:0015171,GO:0015175,GO:0015291,GO:0015293,GO:0015294,GO:0015318,GO:0015370,GO:0015672,GO:0015711,GO:0015804,GO:0015849,GO:0016020,GO:0016021,GO:0017153,GO:0022804,GO:0022857,GO:0022890,GO:0030001,GO:0031224,GO:0032329,GO:0034220,GO:0035725,GO:0044425,GO:0044464,GO:0046873,GO:0046942,GO:0046943,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098655,GO:0098656,GO:0098660,GO:0098662,GO:1903825,GO:1905039 ko:K07862 ko00000,ko02000 2.A.23.4 iAF1260.b3089,iBWG_1329.BWG_2799,iECDH10B_1368.ECDH10B_3265,iECDH1ME8569_1439.ECDH1ME8569_2984,iECH74115_1262.ECH74115_4404,iECIAI1_1343.ECIAI1_3235,iECO103_1326.ECO103_3834,iECO111_1330.ECO111_3911,iECO26_1355.ECO26_4192,iECP_1309.ECP_3180,iECSE_1348.ECSE_3370,iECSP_1301.ECSP_4063,iECUMN_1333.ECUMN_3573,iECW_1372.ECW_m3356,iECs_1301.ECs3971,iEKO11_1354.EKO11_0630,iETEC_1333.ETEC_3359,iEcDH1_1363.EcDH1_0612,iEcE24377_1341.EcE24377A_3557,iG2583_1286.G2583_3813,iJO1366.b3089,iJR904.b3089,iSFV_1184.SFV_3130,iSSON_1240.SSON_3242,iUMNK88_1353.UMNK88_3845,iWFL_1372.ECW_m3356,iY75_1357.Y75_RS16050,iYL1228.KPN_03517,iZ_1308.Z4442 Bacteria 1TPD2@1239,3FB7N@33958,4HBEC@91061,COG3633@1,COG3633@2 NA|NA|NA U Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system) HOOMBAJD_01044 568703.LGG_00603 0.0 1266.1 Lactobacillaceae treB 2.7.1.199,2.7.1.208,2.7.1.211 ko:K02755,ko:K02756,ko:K02757,ko:K02777,ko:K02790,ko:K02791,ko:K02808,ko:K02809,ko:K02810 ko00010,ko00500,ko00520,ko02026,ko02060,ko05111,map00010,map00500,map00520,map02026,map02060,map05111 M00265,M00266,M00268,M00269,M00270,M00271,M00272,M00303,M00806 R00811,R02738,R02780,R04111,R04394,R05132,R08559 RC00017,RC03206 ko00000,ko00001,ko00002,ko01000,ko02000 4.A.1.1.1,4.A.1.1.3,4.A.1.2.1,4.A.1.2.10,4.A.1.2.11,4.A.1.2.12,4.A.1.2.2,4.A.1.2.5,4.A.1.2.6,4.A.1.2.9 Bacteria 1TP5X@1239,3F458@33958,4HA0I@91061,COG1263@1,COG1263@2,COG1264@1,COG1264@2,COG2190@1,COG2190@2 NA|NA|NA G phosphotransferase system HOOMBAJD_01045 568703.LGG_00602 0.0 1134.4 Lactobacillaceae treC GO:0003674,GO:0003824,GO:0004553,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005984,GO:0005991,GO:0005993,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008788,GO:0009056,GO:0009311,GO:0009313,GO:0009987,GO:0015927,GO:0016052,GO:0016787,GO:0016798,GO:0033554,GO:0044237,GO:0044238,GO:0044248,GO:0044262,GO:0044275,GO:0044424,GO:0044444,GO:0044464,GO:0046352,GO:0050896,GO:0051716,GO:0071704,GO:1901575 3.2.1.93 ko:K01226 ko00500,map00500 R00837,R06113 RC00049 ko00000,ko00001,ko01000 GH13 iECW_1372.ECW_m4600,iEKO11_1354.EKO11_4072,iEcE24377_1341.EcE24377A_4811,iEcSMS35_1347.EcSMS35_4720,iWFL_1372.ECW_m4600 Bacteria 1TP53@1239,3F41I@33958,4HA1G@91061,COG0366@1,COG0366@2 NA|NA|NA G Alpha amylase, catalytic domain protein HOOMBAJD_01046 568703.LGG_00601 8.5e-128 463.0 Lactobacillaceae treR ko:K03486,ko:K03492,ko:K03710 ko00000,ko03000 Bacteria 1TRF6@1239,3F62J@33958,4HDCX@91061,COG2188@1,COG2188@2 NA|NA|NA K UTRA HOOMBAJD_01047 568703.LGG_00600 3.2e-220 770.8 Lactobacillaceae oxlT ko:K08177 ko00000,ko02000 2.A.1.11 Bacteria 1TPR9@1239,3F4XT@33958,4HB93@91061,COG2223@1,COG2223@2 NA|NA|NA P Major Facilitator Superfamily HOOMBAJD_01048 568703.LGG_00599 0.0 1140.9 Lactobacillaceae ko:K06147,ko:K18892 ko02010,map02010 M00708 ko00000,ko00001,ko00002,ko02000 3.A.1.106,3.A.1.109,3.A.1.135,3.A.1.21 Bacteria 1TP0B@1239,3F3PD@33958,4HA3S@91061,COG1132@1,COG1132@2 NA|NA|NA V ABC transporter HOOMBAJD_01049 568703.LGG_00598 0.0 1089.3 Lactobacillaceae XK27_09600 ko:K06147,ko:K18891 ko02010,map02010 M00708 ko00000,ko00001,ko00002,ko02000 3.A.1.106,3.A.1.109,3.A.1.135,3.A.1.21 Bacteria 1TP0B@1239,3F3SP@33958,4H9SC@91061,COG1132@1,COG1132@2 NA|NA|NA V ABC transporter, ATP-binding protein HOOMBAJD_01050 568703.LGG_00597 0.0 1526.5 Lactobacillaceae metE GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0003871,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006464,GO:0006479,GO:0006520,GO:0006555,GO:0006575,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008172,GO:0008213,GO:0008276,GO:0008652,GO:0008705,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016020,GO:0016053,GO:0016740,GO:0016741,GO:0019538,GO:0019752,GO:0030312,GO:0032259,GO:0034641,GO:0035999,GO:0036211,GO:0040007,GO:0042084,GO:0042085,GO:0042558,GO:0043170,GO:0043412,GO:0043414,GO:0043436,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046653,GO:0050667,GO:0051186,GO:0071704,GO:0071944,GO:0140096,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.1.14 ko:K00549 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 M00017 R04405,R09365 RC00035,RC00113,RC01241 ko00000,ko00001,ko00002,ko01000 iE2348C_1286.E2348C_4130,iECO103_1326.ECO103_4334,iECO111_1330.ECO111_4657,iECO26_1355.ECO26_4756,iECW_1372.ECW_m4131,iEKO11_1354.EKO11_4528,iPC815.YPO3788,iWFL_1372.ECW_m4131 Bacteria 1TP2H@1239,3F3VW@33958,4H9QC@91061,COG0620@1,COG0620@2 NA|NA|NA E Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation HOOMBAJD_01051 568703.LGG_00596 4e-164 583.9 Lactobacillaceae metF GO:0000166,GO:0003674,GO:0003824,GO:0004489,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006575,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009396,GO:0009987,GO:0016043,GO:0016053,GO:0016491,GO:0016645,GO:0016646,GO:0018130,GO:0019438,GO:0019752,GO:0022607,GO:0034641,GO:0036094,GO:0042398,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043436,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0048037,GO:0050660,GO:0050662,GO:0051186,GO:0051188,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:0071949,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 1.5.1.20 ko:K00297,ko:K21010 ko00670,ko00720,ko01100,ko01120,ko01200,ko01523,ko02025,map00670,map00720,map01100,map01120,map01200,map01523,map02025 M00377 R01224,R07168 RC00081 ko00000,ko00001,ko00002,ko01000 iPC815.YPO0117,iSBO_1134.SBO_3961 Bacteria 1TQFE@1239,3FB7R@33958,4HGHI@91061,COG0685@1,COG0685@2 NA|NA|NA C Methylenetetrahydrofolate reductase HOOMBAJD_01052 568703.LGG_00595 7.9e-146 523.1 Lactobacillaceae pdxK 2.7.1.35 ko:K00868 ko00750,ko01100,map00750,map01100 R00174,R01909,R02493 RC00002,RC00017 ko00000,ko00001,ko01000 Bacteria 1TRCR@1239,3F3V7@33958,4HHME@91061,COG2240@1,COG2240@2 NA|NA|NA H Phosphomethylpyrimidine kinase HOOMBAJD_01053 1423816.BACQ01000040_gene1616 6.2e-78 297.0 Lactobacillaceae ko:K16923 M00582 ko00000,ko00002,ko02000 3.A.1.28 Bacteria 1V52B@1239,3FBCH@33958,4HJY9@91061,COG4720@1,COG4720@2 NA|NA|NA S ECF-type riboflavin transporter, S component HOOMBAJD_01054 568703.LGG_00591 8.5e-145 519.6 Lactobacillaceae CcmA5 ko:K01990 M00254 ko00000,ko00002,ko02000 3.A.1 Bacteria 1TQIH@1239,3F5PG@33958,4HCT1@91061,COG1131@1,COG1131@2 NA|NA|NA V ABC transporter HOOMBAJD_01055 568703.LGG_00590 4.4e-300 1036.6 Lactobacillaceae Bacteria 1TPJG@1239,28HMX@1,2Z7WB@2,3F6T9@33958,4HBRI@91061 NA|NA|NA HOOMBAJD_01056 568703.LGG_00588 1.8e-168 598.6 Lactobacillaceae yicL Bacteria 1TR6G@1239,3F423@33958,4HAMD@91061,COG0697@1,COG0697@2 NA|NA|NA EG EamA-like transporter family HOOMBAJD_01057 568703.LGG_00587 0.0 1374.4 Lactobacillaceae XK27_00720 ko:K13730 ko05100,map05100 ko00000,ko00001 Bacteria 1UVV3@1239,3F8E0@33958,4I2C6@91061,COG4886@1,COG4886@2 NA|NA|NA S Leucine-rich repeat (LRR) protein HOOMBAJD_01058 568703.LGG_00585 2.3e-71 275.0 Lactobacillaceae Bacteria 1W54S@1239,3F5H0@33958,4IF30@91061,COG5492@1,COG5492@2 NA|NA|NA N WxL domain surface cell wall-binding HOOMBAJD_01065 568703.LGG_02500 3.6e-79 300.8 Lactobacillaceae ctsR GO:0006950,GO:0008150,GO:0010035,GO:0010038,GO:0042221,GO:0046686,GO:0046688,GO:0050896,GO:0097501,GO:1990169,GO:1990170 ko:K03708 ko00000,ko03000 Bacteria 1VAXT@1239,3F53E@33958,4HIFT@91061,COG4463@1,COG4463@2 NA|NA|NA K Belongs to the CtsR family HOOMBAJD_01066 568703.LGG_02499 0.0 1598.9 Lactobacillaceae clpC GO:0006950,GO:0008150,GO:0010035,GO:0010038,GO:0042221,GO:0046686,GO:0046688,GO:0050896,GO:0097501,GO:1990169,GO:1990170 ko:K03696 ko01100,map01100 ko00000,ko03110 Bacteria 1TPMU@1239,3F3RV@33958,4HACY@91061,COG0542@1,COG0542@2 NA|NA|NA O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE HOOMBAJD_01067 568703.LGG_02498 0.0 2377.1 Lactobacillaceae rpoB GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 ko:K03043 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 M00183 R00435,R00441,R00442,R00443 RC02795 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 Bacteria 1TP96@1239,3F4ET@33958,4H9PK@91061,COG0085@1,COG0085@2 NA|NA|NA K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates HOOMBAJD_01068 568703.LGG_02497 0.0 2416.3 Lactobacillaceae rpoC GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 ko:K03046 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 M00183 R00435,R00441,R00442,R00443 RC02795 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 Bacteria 1TNYT@1239,3F3KF@33958,4HA24@91061,COG0086@1,COG0086@2 NA|NA|NA K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates HOOMBAJD_01069 568703.LGG_02496 2.6e-83 314.7 Lactobacillaceae 3.4.23.43 ko:K02236 M00429 ko00000,ko00002,ko01000,ko02044 Bacteria 1U7QC@1239,29Q94@1,30B88@2,3FA0H@33958,4IHMP@91061 NA|NA|NA HOOMBAJD_01070 543734.LCABL_26780 6.1e-38 164.1 Lactobacillaceae Bacteria 1TQBI@1239,3F7WQ@33958,4HBAT@91061,COG4932@1,COG4932@2 NA|NA|NA M domain protein HOOMBAJD_01071 1423816.BACQ01000061_gene2308 0.0 2931.0 Lactobacillaceae Bacteria 1TQBI@1239,3F7WQ@33958,4HBAT@91061,COG4932@1,COG4932@2 NA|NA|NA M domain protein HOOMBAJD_01072 543734.LCABL_26780 1.4e-201 709.1 Lactobacillaceae Bacteria 1TQBI@1239,3F7WQ@33958,4HBAT@91061,COG4932@1,COG4932@2 NA|NA|NA M domain protein HOOMBAJD_01073 543734.LCABL_26780 1.9e-175 622.1 Lactobacillaceae Bacteria 1TQBI@1239,3F7WQ@33958,4HBAT@91061,COG4932@1,COG4932@2 NA|NA|NA M domain protein HOOMBAJD_01074 568703.LGG_02495 3.6e-70 270.8 Lactobacillaceae rpsL GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02950 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1V1FJ@1239,3F64B@33958,4HFMZ@91061,COG0048@1,COG0048@2 NA|NA|NA J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit HOOMBAJD_01075 1423732.BALS01000083_gene2031 8.4e-84 316.2 Lactobacillaceae rpsG GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006417,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015935,GO:0016020,GO:0016043,GO:0017148,GO:0019222,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030312,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065003,GO:0065007,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0080090,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904,GO:2000112,GO:2000113 ko:K02992 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1V1GG@1239,3F3RX@33958,4H9PA@91061,COG0049@1,COG0049@2 NA|NA|NA J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA HOOMBAJD_01076 568703.LGG_02493 0.0 1385.9 Lactobacillaceae fusA GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0019538,GO:0030312,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 ko:K02355 ko00000,ko03012,ko03029 Bacteria 1TPF9@1239,3F3JR@33958,4HAB8@91061,COG0480@1,COG0480@2 NA|NA|NA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome HOOMBAJD_01077 568703.LGG_02491 5.5e-197 693.3 Lactobacillaceae yfjR GO:0008150,GO:0043900,GO:0050789,GO:0050794,GO:0065007,GO:1900190 Bacteria 1VVQ0@1239,3FB7T@33958,4HW20@91061,COG2378@1,COG2378@2 NA|NA|NA K WYL domain HOOMBAJD_01078 568703.LGG_02490 1.7e-107 395.2 Lactobacillaceae ahpC 1.11.1.15 ko:K03386 ko04214,map04214 ko00000,ko00001,ko01000,ko04147 Bacteria 1TQU7@1239,3FCCT@33958,4HVUV@91061,COG0450@1,COG0450@2 NA|NA|NA O C-terminal domain of 1-Cys peroxiredoxin HOOMBAJD_01079 568703.LGG_02489 1.2e-68 265.8 Bacilli psiE ko:K13256 ko00000 Bacteria 1V9CG@1239,4HIMW@91061,COG3223@1,COG3223@2 NA|NA|NA S Phosphate-starvation-inducible E HOOMBAJD_01080 1423732.BALS01000005_gene1068 1.2e-49 202.2 Lactobacillaceae rpsJ GO:0001072,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006355,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0015935,GO:0019219,GO:0019222,GO:0019538,GO:0022626,GO:0022627,GO:0031323,GO:0031326,GO:0031554,GO:0031564,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043244,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0140110,GO:1901564,GO:1901566,GO:1901576,GO:1903506,GO:1990904,GO:2000112,GO:2001141 ko:K02946 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1V6C9@1239,3F6KC@33958,4HIKH@91061,COG0051@1,COG0051@2 NA|NA|NA J Involved in the binding of tRNA to the ribosomes HOOMBAJD_01081 568703.LGG_02487 3e-113 414.5 Lactobacillaceae rplC GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010604,GO:0010628,GO:0015934,GO:0016020,GO:0016043,GO:0019219,GO:0019222,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0031323,GO:0031325,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065003,GO:0065007,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0080090,GO:0090069,GO:0090070,GO:1901564,GO:1901566,GO:1901576,GO:1990904,GO:2000232,GO:2000234 ko:K02906 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1TPFT@1239,3F45I@33958,4HAEN@91061,COG0087@1,COG0087@2 NA|NA|NA J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit HOOMBAJD_01082 568703.LGG_02486 5.9e-109 400.2 Lactobacillaceae rplD GO:0001130,GO:0001217,GO:0003674,GO:0003676,GO:0003700,GO:0003723,GO:0003735,GO:0004857,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005844,GO:0005886,GO:0006355,GO:0006412,GO:0006417,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008428,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015934,GO:0016020,GO:0016043,GO:0017148,GO:0019219,GO:0019222,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0030234,GO:0030312,GO:0030371,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032069,GO:0032074,GO:0032268,GO:0032269,GO:0032991,GO:0032993,GO:0034248,GO:0034249,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042788,GO:0043043,GO:0043086,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045182,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050790,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0051252,GO:0051253,GO:0051336,GO:0051346,GO:0060255,GO:0060698,GO:0060699,GO:0060700,GO:0060701,GO:0060702,GO:0065003,GO:0065007,GO:0065009,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0080090,GO:0097159,GO:0098772,GO:0140110,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1902679,GO:1903506,GO:1903507,GO:1990904,GO:2000112,GO:2000113,GO:2001141 ko:K02926,ko:K16193 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1TPGW@1239,3F3QD@33958,4HB01@91061,COG0088@1,COG0088@2 NA|NA|NA J Forms part of the polypeptide exit tunnel HOOMBAJD_01083 568703.LGG_02485 2e-46 191.4 Lactobacillaceae rplW GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02892 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1VA4W@1239,3F6Z2@33958,4HKCV@91061,COG0089@1,COG0089@2 NA|NA|NA J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome HOOMBAJD_01084 568703.LGG_02484 3.9e-156 557.4 Lactobacillaceae rplB GO:0000027,GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046872,GO:0046914,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02886 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1TP9X@1239,3F3XI@33958,4HAE8@91061,COG0090@1,COG0090@2 NA|NA|NA J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity HOOMBAJD_01085 1423732.BALS01000005_gene1073 2.2e-47 194.5 Lactobacillaceae rpsS GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02965 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1V6CX@1239,3F6XP@33958,4HIG0@91061,COG0185@1,COG0185@2 NA|NA|NA J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA HOOMBAJD_01086 1423732.BALS01000005_gene1074 1.1e-54 219.2 Lactobacillaceae rplV GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005844,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0030312,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042788,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02890 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1V6PU@1239,3F6K6@33958,4HIK2@91061,COG0091@1,COG0091@2 NA|NA|NA J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome HOOMBAJD_01087 568703.LGG_02481 3.7e-109 401.0 Lactobacillaceae rpsC GO:0000028,GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030312,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02982 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1TPCP@1239,3F3Q8@33958,4HAUR@91061,COG0092@1,COG0092@2 NA|NA|NA J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation HOOMBAJD_01088 1423732.BALS01000005_gene1076 2.3e-75 288.1 Lactobacillaceae rplP GO:0000027,GO:0000049,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02878 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1V1AY@1239,3F653@33958,4HFPN@91061,COG0197@1,COG0197@2 NA|NA|NA J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs HOOMBAJD_01089 1423732.BALS01000005_gene1077 1.1e-24 118.6 Lactobacillaceae rpmC GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02904 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1VEME@1239,3F82Z@33958,4HNUP@91061,COG0255@1,COG0255@2 NA|NA|NA J Belongs to the universal ribosomal protein uL29 family HOOMBAJD_01090 1423732.BALS01000005_gene1078 1.4e-40 171.8 Lactobacillaceae rpsQ GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02961 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1V9YC@1239,3F7FX@33958,4HKDN@91061,COG0186@1,COG0186@2 NA|NA|NA J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA HOOMBAJD_01091 543734.LCABL_26600 2.1e-58 231.5 Lactobacillaceae rplN GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0071704,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02874 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1V3N0@1239,3F6GT@33958,4HGYR@91061,COG0093@1,COG0093@2 NA|NA|NA J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome HOOMBAJD_01092 568703.LGG_02476 2.4e-50 204.5 Lactobacillaceae rplX GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0030312,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02895 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1V9ZQ@1239,3F6X5@33958,4HKH9@91061,COG0198@1,COG0198@2 NA|NA|NA J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit HOOMBAJD_01093 568703.LGG_02475 1.1e-95 355.9 Lactobacillaceae rplE GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02931 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1TPE0@1239,3F3Q7@33958,4HBAX@91061,COG0094@1,COG0094@2 NA|NA|NA J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits HOOMBAJD_01094 543734.LCABL_26570 1e-66 259.2 Lactobacillaceae rpsH GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009894,GO:0009987,GO:0010467,GO:0010468,GO:0010608,GO:0015935,GO:0016043,GO:0019219,GO:0019222,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0031323,GO:0031329,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043487,GO:0043488,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0061013,GO:0065003,GO:0065007,GO:0065008,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903311,GO:1990904 ko:K02994 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1V3KK@1239,3F64E@33958,4HH32@91061,COG0096@1,COG0096@2 NA|NA|NA J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit HOOMBAJD_01095 568703.LGG_02472 2.3e-93 348.2 Lactobacillaceae rplF GO:0000027,GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0030312,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070180,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02933 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1V1FC@1239,3F4G5@33958,4HFQD@91061,COG0097@1,COG0097@2 NA|NA|NA J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center HOOMBAJD_01096 1423732.BALS01000005_gene1084 4.6e-58 230.3 Lactobacillaceae rplR GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02881 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1V6DM@1239,3F6KN@33958,4HIGF@91061,COG0256@1,COG0256@2 NA|NA|NA J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance HOOMBAJD_01097 568703.LGG_02470 1.2e-83 315.8 Lactobacillaceae rpsE GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990145,GO:1990904 ko:K02988 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1V1B1@1239,3F3VY@33958,4HFN4@91061,COG0098@1,COG0098@2 NA|NA|NA J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body HOOMBAJD_01098 1423732.BALS01000005_gene1086 1.7e-24 117.9 Lactobacillaceae rpmD GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 ko:K02907 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1VEG4@1239,3F7ZU@33958,4HNHF@91061,COG1841@1,COG1841@2 NA|NA|NA J Ribosomal protein L30 HOOMBAJD_01099 1423732.BALS01000005_gene1087 2.2e-62 245.0 Lactobacillaceae rplO GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02876 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1V3KE@1239,3F675@33958,4HFPW@91061,COG0200@1,COG0200@2 NA|NA|NA J Binds to the 23S rRNA HOOMBAJD_01100 568703.LGG_02467 9.8e-231 805.8 Lactobacillaceae secY GO:0002790,GO:0003674,GO:0005048,GO:0005215,GO:0005488,GO:0005575,GO:0005576,GO:0005623,GO:0005886,GO:0005887,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006616,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0022857,GO:0022884,GO:0031224,GO:0031226,GO:0031522,GO:0032940,GO:0032978,GO:0032991,GO:0033036,GO:0033218,GO:0033365,GO:0034613,GO:0040007,GO:0042277,GO:0042886,GO:0042887,GO:0043952,GO:0044425,GO:0044459,GO:0044464,GO:0045047,GO:0045184,GO:0046903,GO:0046907,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061024,GO:0065002,GO:0070727,GO:0070972,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:1904680 ko:K03076 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 ko00000,ko00001,ko00002,ko02044 3.A.5 Bacteria 1TPHB@1239,3F4FV@33958,4HAWH@91061,COG0201@1,COG0201@2 NA|NA|NA U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently HOOMBAJD_01101 568703.LGG_02466 1.4e-121 442.2 Lactobacillaceae adk GO:0003674,GO:0003824,GO:0004017,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576 2.7.4.3 ko:K00939 ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130 M00049 R00127,R01547,R11319 RC00002 ko00000,ko00001,ko00002,ko01000,ko04147 iHN637.CLJU_RS20110 Bacteria 1TP27@1239,3F3KB@33958,4HA89@91061,COG0563@1,COG0563@2 NA|NA|NA F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism HOOMBAJD_01102 1423732.BALS01000005_gene1090 1.4e-33 148.3 Lactobacillaceae infA GO:0001871,GO:0003674,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008150,GO:0009986,GO:0016020,GO:0030246,GO:0030247,GO:0030312,GO:0040007,GO:0043021,GO:0043022,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071944,GO:2001065 ko:K02518 ko00000,ko03012 Bacteria 1V9ZK@1239,3F7CW@33958,4HKF4@91061,COG0361@1,COG0361@2 NA|NA|NA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex HOOMBAJD_01103 543734.LCABL_26480 6.6e-14 82.0 Lactobacillaceae rpmJ GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02919 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1VK4F@1239,3F8TC@33958,4HR2X@91061,COG0257@1,COG0257@2 NA|NA|NA J Belongs to the bacterial ribosomal protein bL36 family HOOMBAJD_01104 568703.LGG_02463 2.1e-58 231.5 Lactobacillaceae rpsM GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0019538,GO:0022613,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02952 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1V3JH@1239,3F6GN@33958,4HGX6@91061,COG0099@1,COG0099@2 NA|NA|NA J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits HOOMBAJD_01105 543734.LCABL_26460 4e-63 247.3 Lactobacillaceae rpsK GO:0000028,GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0016043,GO:0016070,GO:0016072,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034660,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0048027,GO:0065003,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02948 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1V3IK@1239,3F67D@33958,4HH2T@91061,COG0100@1,COG0100@2 NA|NA|NA J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome HOOMBAJD_01106 568703.LGG_02461 3.6e-171 607.4 Lactobacillaceae rpoA GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 ko:K03040 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 M00183 R00435,R00441,R00442,R00443 RC02795 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 Bacteria 1TPR8@1239,3F3W6@33958,4H9R1@91061,COG0202@1,COG0202@2 NA|NA|NA K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates HOOMBAJD_01107 568703.LGG_02460 3.1e-60 237.7 Lactobacillaceae rplQ GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0030312,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02879,ko:K16193 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1V6JQ@1239,3F6GJ@33958,4HGX2@91061,COG0203@1,COG0203@2 NA|NA|NA J Ribosomal protein L17 HOOMBAJD_01108 568703.LGG_02459 9e-116 422.9 Lactobacillaceae Bacteria 1U7Q7@1239,2BKGG@1,32EXB@2,3FA0B@33958,4IHMI@91061 NA|NA|NA HOOMBAJD_01109 568703.LGG_02458 1.8e-153 548.5 Lactobacillaceae ecfA1 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006820,GO:0006855,GO:0008150,GO:0008509,GO:0008514,GO:0015075,GO:0015238,GO:0015711,GO:0015893,GO:0016020,GO:0022857,GO:0032217,GO:0032218,GO:0034220,GO:0035461,GO:0042221,GO:0042493,GO:0044464,GO:0050896,GO:0051179,GO:0051180,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0090482,GO:0098656 ko:K16784,ko:K16786,ko:K16787 ko02010,map02010 M00581,M00582 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.25,3.A.1.25.1,3.A.1.28,3.A.1.29,3.A.1.30,3.A.1.31,3.A.1.32,3.A.1.33,3.A.1.35 Bacteria 1TPH8@1239,3F3VD@33958,4H9R8@91061,COG1122@1,COG1122@2 NA|NA|NA P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates HOOMBAJD_01110 568703.LGG_02457 3.2e-158 564.3 Lactobacillaceae ecfA2 GO:0000166,GO:0003674,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006820,GO:0006855,GO:0008144,GO:0008150,GO:0008509,GO:0008514,GO:0015075,GO:0015238,GO:0015711,GO:0015893,GO:0016020,GO:0017076,GO:0022857,GO:0030554,GO:0032217,GO:0032218,GO:0032553,GO:0032555,GO:0032559,GO:0034220,GO:0035461,GO:0035639,GO:0036094,GO:0042221,GO:0042493,GO:0043167,GO:0043168,GO:0044464,GO:0050896,GO:0051179,GO:0051180,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0090482,GO:0097159,GO:0097367,GO:0098656,GO:1901265,GO:1901363 3.6.3.55 ko:K02068,ko:K06857,ko:K16784,ko:K16786,ko:K16787 ko02010,map02010 M00186,M00211,M00581,M00582 R10531 RC00002 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.25,3.A.1.25.1,3.A.1.28,3.A.1.29,3.A.1.30,3.A.1.31,3.A.1.32,3.A.1.33,3.A.1.35,3.A.1.6.2,3.A.1.6.4 Bacteria 1TPH8@1239,3F48E@33958,4HA7T@91061,COG1122@1,COG1122@2 NA|NA|NA P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates HOOMBAJD_01111 568703.LGG_02456 1.6e-143 515.4 Lactobacillaceae ecfT GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006820,GO:0006855,GO:0008150,GO:0008509,GO:0008514,GO:0015075,GO:0015238,GO:0015711,GO:0015893,GO:0016020,GO:0022857,GO:0032217,GO:0032218,GO:0034220,GO:0035461,GO:0042221,GO:0042493,GO:0044464,GO:0050896,GO:0051179,GO:0051180,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0090482,GO:0098656 ko:K02008,ko:K16783,ko:K16785 ko02010,map02010 M00245,M00246,M00581,M00582 ko00000,ko00001,ko00002,ko02000 3.A.1.18,3.A.1.22,3.A.1.23,3.A.1.25,3.A.1.25.1,3.A.1.28,3.A.1.29,3.A.1.30,3.A.1.31,3.A.1.32,3.A.1.33,3.A.1.35 Bacteria 1TQ0E@1239,3F3UW@33958,4H9VT@91061,COG0619@1,COG0619@2 NA|NA|NA U Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates HOOMBAJD_01112 568703.LGG_02455 4.2e-138 497.3 Lactobacillaceae truA GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 ko:K06173 ko00000,ko01000,ko03016 Bacteria 1TQUY@1239,3F4KC@33958,4HCFI@91061,COG0101@1,COG0101@2 NA|NA|NA J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs HOOMBAJD_01113 568703.LGG_02454 5.8e-135 486.9 Lactobacillaceae tipA ko:K21744 ko00000,ko03000 Bacteria 1TS6Z@1239,3FC68@33958,4HUDT@91061,COG0789@1,COG0789@2 NA|NA|NA K TipAS antibiotic-recognition domain HOOMBAJD_01114 568703.LGG_01996 1.4e-77 295.4 Lactobacillaceae rfbD 1.1.1.133,5.1.3.13 ko:K00067,ko:K01790 ko00521,ko00523,ko01130,map00521,map00523,map01130 M00793 R02777,R06514 RC00182,RC01531 ko00000,ko00001,ko00002,ko01000 Bacteria 1TP71@1239,3F4QS@33958,4HBXF@91061,COG1091@1,COG1091@2 NA|NA|NA M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose HOOMBAJD_01115 1423816.BACQ01000050_gene1844 1.6e-75 289.3 Lactobacillaceae cpsE Bacteria 1TP7M@1239,3F51J@33958,4HCBG@91061,COG2148@1,COG2148@2 NA|NA|NA M Bacterial sugar transferase HOOMBAJD_01116 568703.LGG_02037 2.4e-156 558.1 Lactobacillaceae brpA Bacteria 1TR1B@1239,3F3MQ@33958,4HA09@91061,COG1316@1,COG1316@2 NA|NA|NA K Cell envelope-like function transcriptional attenuator common domain protein HOOMBAJD_01117 568703.LGG_02036 7.6e-143 513.1 Lactobacillaceae ywqE 3.1.3.48 ko:K01104 ko00000,ko01000 Bacteria 1TQ1T@1239,3F3RT@33958,4HDZR@91061,COG4464@1,COG4464@2 NA|NA|NA GM PHP domain protein HOOMBAJD_01118 568703.LGG_02035 0.0 1375.9 Lactobacillaceae clpL ko:K04086 ko00000,ko03110 Bacteria 1TPMU@1239,3F43D@33958,4HA0V@91061,COG0542@1,COG0542@2 NA|NA|NA O associated with various cellular activities HOOMBAJD_01119 568703.LGG_02034 5.7e-65 253.4 Lactobacillaceae nrp 1.20.4.1 ko:K00537,ko:K16509 ko00000,ko01000 Bacteria 1V3QC@1239,3F9SP@33958,4HH0I@91061,COG1393@1,COG1393@2 NA|NA|NA P ArsC family HOOMBAJD_01120 568703.LGG_02032 0.0 1303.5 Lactobacillaceae fbp 3.1.3.11 ko:K04041 ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200 M00003,M00165,M00167 R00762,R04780 RC00017 ko00000,ko00001,ko00002,ko01000 Bacteria 1TPFU@1239,3F4MG@33958,4HBAN@91061,COG3855@1,COG3855@2 NA|NA|NA G phosphatase activity HOOMBAJD_01121 568703.LGG_02031 3.4e-144 517.7 Lactobacillaceae Bacteria 1TWZ5@1239,3F54A@33958,4HD8R@91061,COG1284@1,COG1284@2 NA|NA|NA S Uncharacterised 5xTM membrane BCR, YitT family COG1284 HOOMBAJD_01122 568703.LGG_02030 9.4e-116 423.3 Lactobacillaceae ylcC 3.4.22.70 ko:K07284 ko00000,ko01000,ko01002,ko01011 Bacteria 1VXZD@1239,3F9NX@33958,4HXV4@91061,COG3764@1,COG3764@2 NA|NA|NA M Sortase family HOOMBAJD_01123 568703.LGG_02028 4e-203 713.8 Lactobacillaceae ilvE 2.6.1.42 ko:K00826 ko00270,ko00280,ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00270,map00280,map00290,map00770,map01100,map01110,map01130,map01210,map01230 M00019,M00036,M00119,M00570 R01090,R01214,R02199,R10991 RC00006,RC00036 ko00000,ko00001,ko00002,ko01000,ko01007 Bacteria 1TQQI@1239,3F4BD@33958,4HASX@91061,COG0115@1,COG0115@2 NA|NA|NA E Branched-chain amino acid aminotransferase HOOMBAJD_01124 568703.LGG_02027 0.0 1458.4 Lactobacillaceae glgB GO:0000271,GO:0003674,GO:0003824,GO:0003844,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005975,GO:0005976,GO:0005977,GO:0005978,GO:0006073,GO:0006091,GO:0006112,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009250,GO:0009987,GO:0015980,GO:0016020,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0033554,GO:0033692,GO:0034637,GO:0034645,GO:0040007,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716,GO:0055114,GO:0071704,GO:0071944,GO:1901576 2.4.1.18,3.2.1.141,3.2.1.20 ko:K00700,ko:K01187,ko:K01236,ko:K17734 ko00052,ko00500,ko01100,ko01110,map00052,map00500,map01100,map01110 M00565 R00028,R00801,R00802,R02110,R06087,R06088,R09995,R11256 RC00028,RC00049,RC00077 ko00000,ko00001,ko00002,ko01000,ko01002,ko04147 CBM48,GH13,GH31 iAPECO1_1312.APECO1_3025,iECNA114_1301.ECNA114_3542,iECOK1_1307.ECOK1_3857,iECS88_1305.ECS88_3830,iECSF_1327.ECSF_3253,iJN678.glgB,iLF82_1304.LF82_0837,iNRG857_1313.NRG857_17030,iUTI89_1310.UTI89_C3941 Bacteria 1TP4M@1239,3F4KT@33958,4HAPM@91061,COG0296@1,COG0296@2 NA|NA|NA G Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position HOOMBAJD_01125 568703.LGG_02026 1.7e-197 695.3 Lactobacillaceae glgC 2.7.7.27 ko:K00975 ko00500,ko00520,ko01100,ko01110,ko02026,map00500,map00520,map01100,map01110,map02026 M00565 R00948 RC00002 ko00000,ko00001,ko00002,ko01000 Bacteria 1TNZW@1239,3F4IA@33958,4HAZX@91061,COG0448@1,COG0448@2 NA|NA|NA H Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans HOOMBAJD_01126 568703.LGG_02025 1.1e-198 699.1 Lactobacillaceae glgD 2.4.1.21,2.7.7.27 ko:K00703,ko:K00975 ko00500,ko00520,ko01100,ko01110,ko02026,map00500,map00520,map01100,map01110,map02026 M00565 R00948,R02421 RC00002,RC00005 ko00000,ko00001,ko00002,ko01000,ko01003 GT5 Bacteria 1TPZ3@1239,3F58E@33958,4H9UQ@91061,COG0448@1,COG0448@2 NA|NA|NA G Nucleotidyl transferase HOOMBAJD_01127 568703.LGG_02024 8.9e-286 988.8 Lactobacillaceae glgA GO:0003674,GO:0003824,GO:0016740,GO:0016757 2.4.1.21 ko:K00703 ko00500,ko01100,ko01110,ko02026,map00500,map01100,map01110,map02026 M00565 R02421 RC00005 ko00000,ko00001,ko00002,ko01000,ko01003 GT5 Bacteria 1TQ4M@1239,3F3PP@33958,4HAVA@91061,COG0297@1,COG0297@2 NA|NA|NA F Synthesizes alpha-1,4-glucan chains using ADP-glucose HOOMBAJD_01129 568703.LGG_02023 0.0 1601.6 Lactobacillaceae glgP GO:0000272,GO:0003674,GO:0003824,GO:0004645,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0005976,GO:0005977,GO:0005980,GO:0006073,GO:0006091,GO:0006112,GO:0008144,GO:0008150,GO:0008152,GO:0008184,GO:0009056,GO:0009057,GO:0009251,GO:0009987,GO:0015980,GO:0016052,GO:0016740,GO:0016757,GO:0016758,GO:0019842,GO:0030170,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044247,GO:0044248,GO:0044260,GO:0044262,GO:0044264,GO:0044275,GO:0044424,GO:0044464,GO:0048037,GO:0050662,GO:0055114,GO:0070279,GO:0071704,GO:0097159,GO:1901363,GO:1901575 2.4.1.1 ko:K00688 ko00500,ko01100,ko01110,ko02026,ko04217,ko04910,ko04922,ko04931,map00500,map01100,map01110,map02026,map04217,map04910,map04922,map04931 R02111 ko00000,ko00001,ko01000 GT35 iYO844.BSU30940 Bacteria 1TQAJ@1239,3F4Z1@33958,4H9XI@91061,COG0058@1,COG0058@2 NA|NA|NA G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties HOOMBAJD_01130 568703.LGG_02022 0.0 1232.2 Lactobacillaceae malQ 2.4.1.25,3.2.1.20,3.2.1.41 ko:K00705,ko:K01187,ko:K01200 ko00052,ko00500,ko01100,ko01110,map00052,map00500,map01100,map01110 R00028,R00801,R00802,R02111,R05196,R06087,R06088 RC00028,RC00049,RC00077 ko00000,ko00001,ko01000 CBM48,GH13,GH31,GH77 Bacteria 1TNZ0@1239,3F41N@33958,4HB67@91061,COG0366@1,COG0366@2 NA|NA|NA G Belongs to the glycosyl hydrolase 13 family HOOMBAJD_01131 568703.LGG_02021 2.3e-173 614.8 Lactobacillaceae 2.7.1.180 ko:K03734 ko00000,ko01000 Bacteria 1TR9C@1239,3F3QR@33958,4HHVC@91061,COG1477@1,COG1477@2 NA|NA|NA H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein HOOMBAJD_01132 568703.LGG_02020 1.4e-53 215.3 Lactobacillaceae arsR ko:K03892 ko00000,ko03000 Bacteria 1VFY4@1239,3F8JS@33958,4HP5T@91061,COG0640@1,COG0640@2 NA|NA|NA K helix_turn_helix, Arsenical Resistance Operon Repressor HOOMBAJD_01133 1423816.BACQ01000049_gene1827 3.4e-161 574.3 Bacilli yeaB Bacteria 1TSGY@1239,4H9WP@91061,COG0053@1,COG0053@2 NA|NA|NA P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family HOOMBAJD_01134 568703.LGG_02017 1e-240 839.0 Lactobacillaceae tyrS GO:0003674,GO:0003824,GO:0004812,GO:0004831,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006437,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.1 ko:K01866 ko00970,map00970 M00359,M00360 R02918 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 iAF1260.b1637,iBWG_1329.BWG_1452,iECDH10B_1368.ECDH10B_1771,iECDH1ME8569_1439.ECDH1ME8569_1581,iECH74115_1262.ECH74115_2349,iECIAI39_1322.ECIAI39_1418,iECNA114_1301.ECNA114_1685,iECO103_1326.ECO103_1778,iECO111_1330.ECO111_2107,iECO26_1355.ECO26_2366,iECSE_1348.ECSE_1760,iECSF_1327.ECSF_1500,iECSP_1301.ECSP_2202,iECUMN_1333.ECUMN_1928,iECW_1372.ECW_m1805,iECs_1301.ECs2346,iEKO11_1354.EKO11_2137,iETEC_1333.ETEC_1672,iEcDH1_1363.EcDH1_2003,iEcE24377_1341.EcE24377A_1847,iEcHS_1320.EcHS_A1713,iEcSMS35_1347.EcSMS35_1562,iEcolC_1368.EcolC_1992,iJO1366.b1637,iSFV_1184.SFV_1654,iSF_1195.SF1662,iSSON_1240.SSON_1519,iSbBS512_1146.SbBS512_E1829,iUMNK88_1353.UMNK88_2097,iWFL_1372.ECW_m1805,iY75_1357.Y75_RS08585 Bacteria 1TPGN@1239,3F48J@33958,4H9YV@91061,COG0162@1,COG0162@2 NA|NA|NA J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) HOOMBAJD_01135 568703.LGG_02016 1.1e-119 436.8 Lactobacillaceae spl ko:K21471 ko00000,ko01000,ko01002,ko01011 Bacteria 1UVYK@1239,3F5PQ@33958,4HDAX@91061,COG0791@1,COG0791@2 NA|NA|NA M NlpC/P60 family HOOMBAJD_01136 568703.LGG_02015 6.8e-66 256.5 Lactobacillaceae Bacteria 1VA4N@1239,3F7MY@33958,4HIIX@91061,COG0454@1,COG0454@2 NA|NA|NA K Acetyltransferase (GNAT) domain HOOMBAJD_01137 568703.LGG_02014 3.6e-111 407.5 Lactobacillaceae gmk2 2.7.4.8 ko:K00942 ko00230,ko01100,map00230,map01100 M00050 R00332,R02090 RC00002 ko00000,ko00001,ko00002,ko01000 Bacteria 1V8PW@1239,3F6N3@33958,4HJCB@91061,COG0194@1,COG0194@2 NA|NA|NA F Guanylate kinase HOOMBAJD_01138 568703.LGG_02013 1.8e-08 63.9 Lactobacillaceae Bacteria 1U8CS@1239,29QNJ@1,30BN7@2,3FAUD@33958,4IIAR@91061 NA|NA|NA HOOMBAJD_01139 568703.LGG_02012 2.1e-84 318.2 Lactobacillaceae zur GO:0000976,GO:0001067,GO:0001130,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032991,GO:0032993,GO:0043565,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2001141 ko:K02076,ko:K03711 ko00000,ko03000 Bacteria 1V6RI@1239,3F6W3@33958,4HIGM@91061,COG0735@1,COG0735@2 NA|NA|NA P Belongs to the Fur family HOOMBAJD_01141 568703.LGG_02010 1.4e-170 605.5 Lactobacillaceae Bacteria 1V7ET@1239,2C6F0@1,32RH8@2,3F4UC@33958,4HJDI@91061 NA|NA|NA HOOMBAJD_01142 568703.LGG_02009 4e-133 480.7 Lactobacillaceae glnQ 3.6.3.21 ko:K02028,ko:K10041 ko02010,map02010 M00228,M00236 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.3 Bacteria 1TNYD@1239,3F3QQ@33958,4H9WY@91061,COG1126@1,COG1126@2 NA|NA|NA E ABC transporter, ATP-binding protein HOOMBAJD_01144 568703.LGG_02008 3.4e-149 534.3 Lactobacillaceae glnH ko:K10039 ko02010,map02010 M00228 ko00000,ko00001,ko00002,ko02000 3.A.1.3 Bacteria 1TT11@1239,3F4GG@33958,4HAHV@91061,COG0834@1,COG0834@2 NA|NA|NA ET ABC transporter substrate-binding protein HOOMBAJD_01145 568703.LGG_02007 5.1e-108 397.1 Lactobacillaceae gluC GO:0003333,GO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006820,GO:0006865,GO:0008150,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015318,GO:0015711,GO:0015849,GO:0016020,GO:0022857,GO:0034220,GO:0044464,GO:0046942,GO:0046943,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098656,GO:1903825,GO:1905039 ko:K10006,ko:K10040 ko02010,map02010 M00228,M00233 ko00000,ko00001,ko00002,ko02000 3.A.1.3,3.A.1.3.9 Bacteria 1TQ5K@1239,3F3XW@33958,4HFBH@91061,COG0765@1,COG0765@2 NA|NA|NA P ABC transporter permease HOOMBAJD_01146 568703.LGG_02006 1.1e-110 406.0 Lactobacillaceae glnP GO:0003333,GO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006820,GO:0006865,GO:0008150,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015318,GO:0015711,GO:0015849,GO:0016020,GO:0022857,GO:0034220,GO:0044464,GO:0046942,GO:0046943,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098656,GO:1903825,GO:1905039 ko:K02029,ko:K10002,ko:K10040 ko02010,ko02020,map02010,map02020 M00228,M00230,M00236 ko00000,ko00001,ko00002,ko02000 3.A.1.3,3.A.1.3.19,3.A.1.3.4 Bacteria 1UJM4@1239,3F3WJ@33958,4HBAS@91061,COG0765@1,COG0765@2 NA|NA|NA P ABC transporter permease HOOMBAJD_01147 568703.LGG_02005 5.4e-175 620.2 Lactobacillaceae cps2D 5.1.3.2 ko:K01784 ko00052,ko00520,ko01100,map00052,map00520,map01100 M00361,M00362,M00632 R00291,R02984 RC00289 ko00000,ko00001,ko00002,ko01000 iSB619.SA_RS00780 Bacteria 1V34Y@1239,3F5GY@33958,4HCJE@91061,COG0451@1,COG0451@2 NA|NA|NA M RmlD substrate binding domain HOOMBAJD_01148 568703.LGG_02004 4.2e-256 890.2 Lactobacillaceae wcaJ ko:K03606 ko05111,map05111 ko00000,ko00001 Bacteria 1TP7M@1239,3F5WM@33958,4HB15@91061,COG2148@1,COG2148@2 NA|NA|NA M Bacterial sugar transferase HOOMBAJD_01149 568703.LGG_02001 7.7e-220 770.0 Lactobacillaceae ko:K07273 ko00000 Bacteria 1V3SH@1239,3F63N@33958,4HNR1@91061,COG3757@1,COG3757@2 NA|NA|NA M Glycosyl hydrolases family 25 HOOMBAJD_01150 568703.LGG_01999 2.3e-164 584.7 Lactobacillaceae rfbA GO:0000271,GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005975,GO:0005976,GO:0005996,GO:0006006,GO:0006139,GO:0006220,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008879,GO:0009058,GO:0009059,GO:0009117,GO:0009141,GO:0009147,GO:0009200,GO:0009211,GO:0009219,GO:0009225,GO:0009226,GO:0009262,GO:0009394,GO:0009987,GO:0016020,GO:0016051,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019299,GO:0019300,GO:0019305,GO:0019318,GO:0019319,GO:0019438,GO:0019637,GO:0019692,GO:0030312,GO:0033692,GO:0034637,GO:0034641,GO:0034645,GO:0034654,GO:0040007,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044271,GO:0044281,GO:0044283,GO:0044464,GO:0045226,GO:0046075,GO:0046364,GO:0046379,GO:0046383,GO:0046483,GO:0046872,GO:0055086,GO:0071704,GO:0071944,GO:0072527,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901576 2.7.7.24 ko:K00973 ko00521,ko00523,ko00525,ko01130,map00521,map00523,map00525,map01130 M00793 R02328 RC00002 ko00000,ko00001,ko00002,ko01000 iNJ661.Rv0334 Bacteria 1V301@1239,3F4F8@33958,4H9R0@91061,COG1209@1,COG1209@2 NA|NA|NA H Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis HOOMBAJD_01152 568703.LGG_01884 1.3e-85 322.4 Lactobacillaceae Bacteria 1U6BM@1239,29PA5@1,30A8A@2,3F7J0@33958,4IG39@91061 NA|NA|NA HOOMBAJD_01153 568703.LGG_01883 1.9e-91 341.7 Lactobacillaceae Bacteria 1U7EP@1239,29Q3J@1,30B27@2,3F9HJ@33958,4IHAJ@91061 NA|NA|NA S MucBP domain HOOMBAJD_01154 568703.LGG_01882 1.6e-117 428.7 Lactobacillaceae ywnB ko:K07118 ko00000 Bacteria 1TZ3T@1239,3F5K7@33958,4HVUN@91061,COG2910@1,COG2910@2 NA|NA|NA S NAD(P)H-binding HOOMBAJD_01157 568703.LGG_01881 3.5e-88 330.9 Lactobacillaceae Bacteria 1V1Z4@1239,3F91J@33958,4HKRE@91061,COG0703@1,COG0703@2 NA|NA|NA E AAA domain HOOMBAJD_01158 568703.LGG_01880 4.5e-119 434.1 Lactobacillaceae Bacteria 1UI5G@1239,3F6R2@33958,4ISEF@91061,COG2755@1,COG2755@2 NA|NA|NA E lipolytic protein G-D-S-L family HOOMBAJD_01159 568703.LGG_01879 1.7e-82 312.0 Lactobacillaceae feoA ko:K04758 ko00000,ko02000 Bacteria 1VEHC@1239,3F729@33958,4HPFS@91061,COG1918@1,COG1918@2 NA|NA|NA P FeoA HOOMBAJD_01160 568703.LGG_01878 0.0 1366.7 Lactobacillaceae feoB ko:K04759 ko00000,ko02000 9.A.8.1 Bacteria 1TP7E@1239,3F553@33958,4HBCS@91061,COG0370@1,COG0370@2 NA|NA|NA P transporter of a GTP-driven Fe(2 ) uptake system HOOMBAJD_01161 568703.LGG_01877 1.6e-24 117.9 Lactobacillaceae Bacteria 1U802@1239,2BP56@1,32HW1@2,3FADE@33958,4IHXF@91061 NA|NA|NA S Virus attachment protein p12 family HOOMBAJD_01162 568703.LGG_01876 0.0 1079.7 Lactobacillaceae pckG GO:0000003,GO:0001655,GO:0001822,GO:0001889,GO:0003006,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004457,GO:0004611,GO:0004613,GO:0005488,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0005829,GO:0005886,GO:0005975,GO:0005996,GO:0006006,GO:0006007,GO:0006066,GO:0006071,GO:0006082,GO:0006089,GO:0006090,GO:0006091,GO:0006094,GO:0006109,GO:0006111,GO:0006113,GO:0006139,GO:0006163,GO:0006464,GO:0006629,GO:0006631,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006735,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006873,GO:0006875,GO:0006879,GO:0006950,GO:0007028,GO:0007154,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007296,GO:0007610,GO:0008150,GO:0008152,GO:0008906,GO:0009056,GO:0009058,GO:0009062,GO:0009117,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009166,GO:0009167,GO:0009179,GO:0009185,GO:0009199,GO:0009205,GO:0009259,GO:0009267,GO:0009410,GO:0009605,GO:0009607,GO:0009636,GO:0009653,GO:0009719,GO:0009725,GO:0009790,GO:0009792,GO:0009887,GO:0009888,GO:0009889,GO:0009966,GO:0009967,GO:0009987,GO:0009991,GO:0010033,GO:0010106,GO:0010243,GO:0010646,GO:0010647,GO:0010675,GO:0010906,GO:0014070,GO:0014074,GO:0015036,GO:0015980,GO:0016020,GO:0016042,GO:0016043,GO:0016051,GO:0016052,GO:0016053,GO:0016054,GO:0016301,GO:0016310,GO:0016491,GO:0016614,GO:0016651,GO:0016667,GO:0016668,GO:0016740,GO:0016772,GO:0016773,GO:0016829,GO:0016830,GO:0016831,GO:0016999,GO:0017001,GO:0017144,GO:0018130,GO:0018991,GO:0019098,GO:0019222,GO:0019249,GO:0019318,GO:0019319,GO:0019320,GO:0019362,GO:0019400,GO:0019405,GO:0019438,GO:0019439,GO:0019516,GO:0019538,GO:0019541,GO:0019543,GO:0019563,GO:0019626,GO:0019637,GO:0019659,GO:0019660,GO:0019661,GO:0019666,GO:0019674,GO:0019693,GO:0019725,GO:0019751,GO:0019752,GO:0019953,GO:0022412,GO:0022414,GO:0023051,GO:0023056,GO:0030003,GO:0030145,GO:0030154,GO:0030312,GO:0030703,GO:0030855,GO:0031323,GO:0031667,GO:0031668,GO:0031669,GO:0031960,GO:0031974,GO:0032501,GO:0032502,GO:0032504,GO:0032787,GO:0032868,GO:0032869,GO:0032870,GO:0033554,GO:0033993,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0035690,GO:0036211,GO:0042221,GO:0042493,GO:0042592,GO:0042594,GO:0042737,GO:0043167,GO:0043169,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043255,GO:0043412,GO:0043434,GO:0043436,GO:0043687,GO:0043900,GO:0043903,GO:0043949,GO:0043950,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044267,GO:0044270,GO:0044271,GO:0044275,GO:0044281,GO:0044282,GO:0044283,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045471,GO:0046031,GO:0046034,GO:0046164,GO:0046174,GO:0046364,GO:0046365,GO:0046394,GO:0046395,GO:0046434,GO:0046459,GO:0046483,GO:0046496,GO:0046677,GO:0046683,GO:0046700,GO:0046872,GO:0046914,GO:0046916,GO:0047134,GO:0048468,GO:0048477,GO:0048513,GO:0048518,GO:0048522,GO:0048545,GO:0048562,GO:0048568,GO:0048583,GO:0048584,GO:0048598,GO:0048609,GO:0048646,GO:0048731,GO:0048732,GO:0048856,GO:0048869,GO:0048878,GO:0050789,GO:0050792,GO:0050794,GO:0050801,GO:0050896,GO:0051186,GO:0051384,GO:0051591,GO:0051701,GO:0051704,GO:0051707,GO:0051716,GO:0052173,GO:0052200,GO:0052564,GO:0052572,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0055086,GO:0055114,GO:0060429,GO:0061005,GO:0061008,GO:0062012,GO:0065007,GO:0065008,GO:0070013,GO:0070365,GO:0070887,GO:0071236,GO:0071310,GO:0071361,GO:0071375,GO:0071383,GO:0071384,GO:0071385,GO:0071396,GO:0071407,GO:0071417,GO:0071466,GO:0071495,GO:0071496,GO:0071548,GO:0071549,GO:0071704,GO:0071840,GO:0071944,GO:0072001,GO:0072071,GO:0072329,GO:0072330,GO:0072521,GO:0072524,GO:0075136,GO:0080090,GO:0097159,GO:0097237,GO:0097305,GO:0097306,GO:0097327,GO:0098771,GO:1901135,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901575,GO:1901576,GO:1901615,GO:1901616,GO:1901617,GO:1901652,GO:1901653,GO:1901654,GO:1901655,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902531,GO:1902533 4.1.1.32,4.1.1.49 ko:K01596,ko:K01610 ko00010,ko00020,ko00620,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko03320,ko04068,ko04151,ko04152,ko04910,ko04920,ko04922,ko04931,ko04964,map00010,map00020,map00620,map00710,map01100,map01110,map01120,map01130,map01200,map03320,map04068,map04151,map04152,map04910,map04920,map04922,map04931,map04964 M00003,M00170 R00341,R00431,R00726 RC00002,RC02741 ko00000,ko00001,ko00002,ko01000 iAF987.Gmet_2638 Bacteria 1UIM9@1239,3FBXE@33958,4HED4@91061,COG1274@1,COG1274@2 NA|NA|NA C Phosphoenolpyruvate carboxykinase HOOMBAJD_01163 568703.LGG_01875 1e-56 225.7 Lactobacillaceae Bacteria 1U7M8@1239,29MVS@1,30B68@2,3F9WC@33958,4IHID@91061 NA|NA|NA HOOMBAJD_01164 568703.LGG_01874 2.6e-232 810.8 Lactobacillaceae alfA 3.2.1.51 ko:K01206 ko00511,map00511 ko00000,ko00001,ko01000,ko04147 GH29 Bacteria 1UYIM@1239,3F5S7@33958,4HJ46@91061,COG3669@1,COG3669@2 NA|NA|NA G Alpha-L-fucosidase HOOMBAJD_01165 568703.LGG_01872 1.4e-259 901.7 Firmicutes ko:K03292,ko:K16210,ko:K16248 ko00000,ko02000 2.A.2,2.A.2.5 Bacteria 1TS1S@1239,COG2211@1,COG2211@2 NA|NA|NA G MFS/sugar transport protein HOOMBAJD_01166 568703.LGG_01871 2.1e-73 281.6 Lactobacillaceae Bacteria 1U6ZG@1239,29PS8@1,30AQG@2,3F8RT@33958,4IGTR@91061 NA|NA|NA S function, without similarity to other proteins HOOMBAJD_01167 568703.LGG_01870 1.4e-65 255.4 Lactobacillaceae Bacteria 1U666@1239,29P63@1,30A48@2,3F75Z@33958,4IFWC@91061 NA|NA|NA HOOMBAJD_01168 568703.LGG_01869 0.0 1449.1 Lactobacillaceae macB_3 ko:K02003,ko:K02004,ko:K05685 ko02010,map02010 M00258,M00709 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1,3.A.1.122.1,3.A.1.122.12 Bacteria 1TPBJ@1239,3F44P@33958,4HBK7@91061,COG0577@1,COG0577@2,COG1136@1,COG1136@2 NA|NA|NA V ABC transporter, ATP-binding protein HOOMBAJD_01169 568703.LGG_01868 3e-257 894.0 Lactobacillaceae dtpT GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K03305 ko00000 2.A.17 Bacteria 1TP81@1239,3F4WU@33958,4HAF2@91061,COG3104@1,COG3104@2 NA|NA|NA U amino acid peptide transporter HOOMBAJD_01170 568703.LGG_01867 6.3e-159 566.6 Lactobacillaceae yjjH Bacteria 1VHY9@1239,3F3SW@33958,4HPAR@91061,COG1409@1,COG1409@2 NA|NA|NA S Calcineurin-like phosphoesterase HOOMBAJD_01172 568703.LGG_01866 3.2e-262 910.6 Lactobacillaceae mga ko:K02538 ko00000,ko03000 Bacteria 1U47D@1239,3F986@33958,4IDYQ@91061,COG3711@1,COG3711@2 NA|NA|NA K Mga helix-turn-helix domain HOOMBAJD_01173 568703.LGG_01865 7.2e-218 764.2 Lactobacillaceae sprD Bacteria 1U47E@1239,3FC1G@33958,4HDDE@91061,COG1196@1,COG1196@2 NA|NA|NA D Domain of Unknown Function (DUF1542) HOOMBAJD_01174 568703.LGG_01865 4.7e-08 63.2 Lactobacillaceae sprD Bacteria 1U47E@1239,3FC1G@33958,4HDDE@91061,COG1196@1,COG1196@2 NA|NA|NA D Domain of Unknown Function (DUF1542) HOOMBAJD_01175 568703.LGG_01865 4.9e-86 326.6 Lactobacillaceae sprD Bacteria 1U47E@1239,3FC1G@33958,4HDDE@91061,COG1196@1,COG1196@2 NA|NA|NA D Domain of Unknown Function (DUF1542) HOOMBAJD_01176 568703.LGG_01864 0.0 1340.9 Lactobacillaceae yuxL 3.4.19.1 ko:K01303 ko00000,ko01000,ko01002 Bacteria 1TR2N@1239,3F59I@33958,4H9RR@91061,COG1506@1,COG1506@2 NA|NA|NA E Prolyl oligopeptidase family HOOMBAJD_01177 568703.LGG_01863 5e-137 493.8 Lactobacillaceae proC 1.5.1.2 ko:K00286 ko00330,ko01100,ko01110,ko01130,ko01230,map00330,map01100,map01110,map01130,map01230 M00015 R01248,R01251,R03291,R03293 RC00054,RC00083 ko00000,ko00001,ko00002,ko01000 Bacteria 1TP1E@1239,3F4SE@33958,4H9RV@91061,COG0345@1,COG0345@2 NA|NA|NA E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline HOOMBAJD_01178 568703.LGG_01862 1.7e-218 765.0 Lactobacillaceae nagA GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005515,GO:0006040,GO:0006044,GO:0006046,GO:0008150,GO:0008152,GO:0008448,GO:0009056,GO:0016787,GO:0016810,GO:0016811,GO:0019213,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0046348,GO:0046872,GO:0046914,GO:0046983,GO:0071704,GO:1901071,GO:1901072,GO:1901135,GO:1901136,GO:1901575 3.5.1.25 ko:K01443 ko00520,ko01130,map00520,map01130 R02059 RC00166,RC00300 ko00000,ko00001,ko01000 Bacteria 1TPFK@1239,3F40F@33958,4HC6C@91061,COG1820@1,COG1820@2 NA|NA|NA G Belongs to the metallo-dependent hydrolases superfamily. NagA family HOOMBAJD_01179 568703.LGG_01861 6.6e-125 453.4 Lactobacillaceae gntR1 ko:K03710,ko:K11922 ko00000,ko03000 Bacteria 1UYBW@1239,3F4D0@33958,4HDDG@91061,COG2188@1,COG2188@2 NA|NA|NA K UbiC transcription regulator-associated domain protein HOOMBAJD_01180 568703.LGG_01860 6.1e-274 949.5 Lactobacillaceae pncB GO:0001666,GO:0003674,GO:0003824,GO:0004516,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009605,GO:0009607,GO:0009628,GO:0009987,GO:0016020,GO:0016740,GO:0016757,GO:0016763,GO:0016874,GO:0016879,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019365,GO:0019438,GO:0019637,GO:0019674,GO:0034355,GO:0034641,GO:0034654,GO:0036293,GO:0043094,GO:0043173,GO:0043207,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044403,GO:0044419,GO:0044464,GO:0046483,GO:0046496,GO:0047280,GO:0050896,GO:0051186,GO:0051188,GO:0051701,GO:0051704,GO:0051707,GO:0055086,GO:0070482,GO:0071704,GO:0071944,GO:0072524,GO:0072525,GO:0075136,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.21 ko:K00763 ko00760,ko01100,map00760,map01100 R01724 RC00033 ko00000,ko00001,ko01000 iYO844.BSU31750 Bacteria 1TPDW@1239,3F3K7@33958,4HAI4@91061,COG1488@1,COG1488@2 NA|NA|NA F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP HOOMBAJD_01181 568703.LGG_01859 3.7e-221 773.9 Lactobacillaceae Bacteria 1V0GX@1239,3F4TH@33958,4HCXH@91061,COG1680@1,COG1680@2 NA|NA|NA V Beta-lactamase HOOMBAJD_01182 568703.LGG_01858 2.2e-151 541.6 Lactobacillaceae nadE GO:0003674,GO:0003824,GO:0003952,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008795,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016874,GO:0016879,GO:0016880,GO:0016884,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019365,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0033554,GO:0034355,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043094,GO:0043173,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046496,GO:0050896,GO:0051186,GO:0051188,GO:0051716,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.1.5 ko:K01916 ko00760,ko01100,map00760,map01100 M00115 R00189 RC00100 ko00000,ko00001,ko00002,ko01000 iECSE_1348.ECSE_1910,iECW_1372.ECW_m1909,iEKO11_1354.EKO11_2035,iETEC_1333.ETEC_1772,iEcE24377_1341.EcE24377A_1961,iSFV_1184.SFV_1480,iSF_1195.SF1486,iSFxv_1172.SFxv_1676,iSSON_1240.SSON_1418,iS_1188.S1603,iWFL_1372.ECW_m1909 Bacteria 1TQ38@1239,3F43Z@33958,4HA2R@91061,COG0171@1,COG0171@2 NA|NA|NA F Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source HOOMBAJD_01183 568703.LGG_01857 1.7e-215 755.0 Lactobacillaceae Bacteria 1V0GX@1239,3F4TH@33958,4HCXH@91061,COG1680@1,COG1680@2 NA|NA|NA V Beta-lactamase HOOMBAJD_01184 568703.LGG_01855 0.0 1662.5 Lactobacillaceae pacL 3.6.3.8 ko:K01537 ko00000,ko01000 3.A.3.2 Bacteria 1TPF5@1239,3F3KP@33958,4H9S5@91061,COG0474@1,COG0474@2 NA|NA|NA P P-type ATPase HOOMBAJD_01185 568703.LGG_01854 2.6e-71 274.6 Lactobacillaceae ko:K02029,ko:K02030 M00236 ko00000,ko00002,ko02000 3.A.1.3 Bacteria 1VFU9@1239,2E7AN@1,331U3@2,3FBB1@33958,4HY33@91061 NA|NA|NA HOOMBAJD_01186 568703.LGG_01853 7.5e-175 619.8 Lactobacillaceae XK27_08835 ko:K01989,ko:K05832 M00247 ko00000,ko00002,ko02000 Bacteria 1TPB0@1239,3F462@33958,4HESK@91061,COG2984@1,COG2984@2 NA|NA|NA S ABC transporter HOOMBAJD_01187 568703.LGG_01852 7.4e-129 466.8 Lactobacillaceae XK27_08840 ko:K05832 M00247 ko00000,ko00002,ko02000 Bacteria 1TPDJ@1239,3F40J@33958,4HBMY@91061,COG4120@1,COG4120@2 NA|NA|NA U Belongs to the binding-protein-dependent transport system permease family HOOMBAJD_01188 568703.LGG_01851 2.8e-129 468.0 Lactobacillaceae XK27_08845 ko:K05833 M00247 ko00000,ko00002,ko02000 Bacteria 1TPAN@1239,3F3NW@33958,4HCHC@91061,COG1101@1,COG1101@2 NA|NA|NA S ABC transporter, ATP-binding protein HOOMBAJD_01189 568703.LGG_01850 1.4e-83 315.5 Lactobacillaceae ydcK ko:K03095 ko00000 Bacteria 1V6NU@1239,3F703@33958,4HIHY@91061,COG3091@1,COG3091@2 NA|NA|NA S Belongs to the SprT family HOOMBAJD_01190 568703.LGG_01849 9.5e-80 302.8 Lactobacillaceae yodP 2.3.1.264 ko:K21935 R11701 ko00000,ko01000 Bacteria 1VEF8@1239,3F77Z@33958,4IFXF@91061,COG0454@1,COG0456@2 NA|NA|NA K FR47-like protein HOOMBAJD_01192 568703.LGG_01847 4.4e-101 374.0 Lactobacillaceae Bacteria 1VB4T@1239,3F497@33958,4HMUC@91061,COG4684@1,COG4684@2 NA|NA|NA S ECF transporter, substrate-specific component HOOMBAJD_01193 568703.LGG_01846 8.8e-212 742.7 Lactobacillaceae argE 3.5.1.18 ko:K01439 ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230 M00016 R02734 RC00064,RC00090 ko00000,ko00001,ko00002,ko01000 Bacteria 1TPMJ@1239,3F3N9@33958,4HB39@91061,COG0624@1,COG0624@2 NA|NA|NA E succinyl-diaminopimelate desuccinylase HOOMBAJD_01194 568703.LGG_01845 1.2e-157 562.4 Lactobacillaceae 5.1.3.3 ko:K01785 ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130 M00632 R01602,R10619 RC00563 ko00000,ko00001,ko00002,ko01000 Bacteria 1U7B1@1239,3F98X@33958,4IH61@91061,COG2017@1,COG2017@2 NA|NA|NA G Aldose 1-epimerase HOOMBAJD_01195 568703.LGG_01842 1.8e-101 375.2 Lactobacillaceae ko:K07448 ko00000,ko02048 Bacteria 1VBYF@1239,3F8C4@33958,4HM6M@91061,COG1787@1,COG1787@2 NA|NA|NA V Restriction endonuclease HOOMBAJD_01196 568703.LGG_01841 1.7e-159 568.5 Lactobacillaceae 3.2.1.52 ko:K12373 ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142 M00079 R00022,R06004,R11316 RC00049 ko00000,ko00001,ko00002,ko01000,ko03110 GH20 Bacteria 1VSC9@1239,3F4RS@33958,4HUQI@91061,COG1082@1,COG1082@2 NA|NA|NA G Xylose isomerase domain protein TIM barrel HOOMBAJD_01197 568703.LGG_01840 1.1e-47 195.7 Lactobacillaceae Bacteria 1U6HZ@1239,2B6X8@1,31ZX5@2,3F7YC@33958,4IGAA@91061 NA|NA|NA HOOMBAJD_01198 568703.LGG_01839 8e-208 729.6 Lactobacillaceae atoB 1.1.1.88,2.3.1.9 ko:K00054,ko:K00626 ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020 M00088,M00095,M00373,M00374,M00375 R00238,R01177,R02081 RC00004,RC00326,RC00644 ko00000,ko00001,ko00002,ko01000,ko04147 Bacteria 1TP07@1239,3F3Q5@33958,4H9RJ@91061,COG0183@1,COG0183@2 NA|NA|NA I Belongs to the thiolase family HOOMBAJD_01199 568703.LGG_01838 9.7e-212 742.7 Lactobacillaceae mvaA 1.1.1.34,1.1.1.88 ko:K00021,ko:K00054 ko00900,ko01100,ko01110,ko01130,ko04152,ko04976,map00900,map01100,map01110,map01130,map04152,map04976 M00095 R02081,R02082 RC00004,RC00644 ko00000,ko00001,ko00002,ko01000 Bacteria 1TPNY@1239,3F3YY@33958,4HBQ3@91061,COG1257@1,COG1257@2 NA|NA|NA C Belongs to the HMG-CoA reductase family HOOMBAJD_01200 568703.LGG_01837 2e-219 768.1 Lactobacillaceae mvaS 2.3.3.10 ko:K01641 ko00072,ko00280,ko00650,ko00900,ko01100,ko01110,ko01130,map00072,map00280,map00650,map00900,map01100,map01110,map01130 M00088,M00095 R01978 RC00004,RC00503 ko00000,ko00001,ko00002,ko01000 Bacteria 1TR4K@1239,3F425@33958,4HA67@91061,COG3425@1,COG3425@2 NA|NA|NA I Hydroxymethylglutaryl-CoA synthase HOOMBAJD_01202 1423732.BALS01000007_gene567 2.1e-48 198.0 Lactobacillaceae poxB 1.2.3.3,1.2.5.1 ko:K00156,ko:K00158 ko00620,ko01100,map00620,map01100 R00207,R03145 RC00860,RC02745 ko00000,ko00001,ko01000 Bacteria 1TQE8@1239,3F3R9@33958,4HBUS@91061,COG0028@1,COG0028@2 NA|NA|NA EH Belongs to the TPP enzyme family HOOMBAJD_01203 568703.LGG_01836 2.1e-271 941.0 Lactobacillaceae poxB 1.2.3.3,1.2.5.1 ko:K00156,ko:K00158 ko00620,ko01100,map00620,map01100 R00207,R03145 RC00860,RC02745 ko00000,ko00001,ko01000 Bacteria 1TQE8@1239,3F3R9@33958,4HBUS@91061,COG0028@1,COG0028@2 NA|NA|NA EH Belongs to the TPP enzyme family HOOMBAJD_01204 568703.LGG_01835 6.4e-79 300.1 Lactobacillaceae Bacteria 1V3SN@1239,3F6KR@33958,4HH4T@91061,COG3613@1,COG3613@2 NA|NA|NA F Nucleoside 2-deoxyribosyltransferase HOOMBAJD_01205 568703.LGG_01834 1.6e-252 878.2 Lactobacillaceae rumA 2.1.1.190,2.1.1.35 ko:K00557,ko:K03215 ko00000,ko01000,ko03009,ko03016 Bacteria 1TP4H@1239,3F4GQ@33958,4HA6M@91061,COG2265@1,COG2265@2 NA|NA|NA J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family HOOMBAJD_01206 568703.LGG_01833 3e-63 247.7 Lactobacillaceae Bacteria 1U7J8@1239,29Q60@1,30B4X@2,3F9T1@33958,4IHG5@91061 NA|NA|NA HOOMBAJD_01207 568703.LGG_01832 1.3e-290 1005.0 Lactobacillaceae frvR GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0018130,GO:0019438,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:1901360,GO:1901362,GO:1901576 ko:K02538,ko:K03483,ko:K09685,ko:K18531 ko00000,ko03000 Bacteria 1U7FC@1239,3F9IX@33958,4IHBC@91061,COG3711@1,COG3711@2 NA|NA|NA K Mga helix-turn-helix domain HOOMBAJD_01208 568703.LGG_01831 4.1e-139 500.7 Lactobacillaceae recX GO:0003674,GO:0005488,GO:0005515,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0019899,GO:0031668,GO:0033554,GO:0043086,GO:0044092,GO:0050790,GO:0050896,GO:0051716,GO:0065007,GO:0065009,GO:0071496 2.4.1.337 ko:K03565,ko:K19002 ko00561,ko01100,map00561,map01100 R10850 RC00005,RC00059 ko00000,ko00001,ko01000,ko01003,ko03400 GT4 Bacteria 1V72V@1239,3F4BY@33958,4HJ7R@91061,COG2137@1,COG2137@2 NA|NA|NA S Regulatory protein RecX HOOMBAJD_01209 568703.LGG_01830 1.4e-104 385.6 Lactobacillaceae ygaC ko:K07586 ko00000 Bacteria 1TRX8@1239,3F48S@33958,4H9NM@91061,COG3557@1,COG3557@2 NA|NA|NA J Belongs to the UPF0374 family HOOMBAJD_01210 568703.LGG_01829 2.8e-96 357.8 Lactobacillaceae Bacteria 1U6J7@1239,29NVN@1,30AEE@2,3F80T@33958,4IGBR@91061 NA|NA|NA HOOMBAJD_01211 568703.LGG_01828 8.6e-75 286.2 Lactobacillaceae ko:K02348 ko00000 Bacteria 1VA2J@1239,3F6HQ@33958,4HKF5@91061,COG2153@1,COG2153@2 NA|NA|NA S Acetyltransferase (GNAT) domain HOOMBAJD_01212 568703.LGG_01827 2.6e-206 724.5 Lactobacillaceae yueF GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944 Bacteria 1TQ84@1239,3F418@33958,4H9SR@91061,COG0628@1,COG0628@2 NA|NA|NA S AI-2E family transporter HOOMBAJD_01213 568703.LGG_01826 1.1e-242 845.5 Lactobacillaceae hlyX ko:K03699 ko00000,ko02042 Bacteria 1TPN0@1239,3F3KG@33958,4H9SB@91061,COG1253@1,COG1253@2 NA|NA|NA S Transporter associated domain HOOMBAJD_01214 568703.LGG_01825 3.6e-304 1050.0 Lactobacillaceae prfC GO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0016150,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 ko:K02837,ko:K07133 ko00000,ko03012 Bacteria 1TPYT@1239,3F489@33958,4HADS@91061,COG4108@1,COG4108@2 NA|NA|NA J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP HOOMBAJD_01215 568703.LGG_01824 4.3e-46 190.3 Lactobacillaceae XK27_09445 Bacteria 1VFRS@1239,2EBZ8@1,335YI@2,3F70G@33958,4HNUK@91061 NA|NA|NA S Domain of unknown function (DUF1827) HOOMBAJD_01216 568703.LGG_01823 0.0 1275.8 Lactobacillaceae clpE GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K03697 ko00000,ko03110 Bacteria 1TPMU@1239,3F3K9@33958,4HA0V@91061,COG0542@1,COG0542@2 NA|NA|NA O Belongs to the ClpA ClpB family HOOMBAJD_01217 1423816.BACQ01000003_gene57 2e-28 131.0 Firmicutes Bacteria 1VKXC@1239,2EI19@1,33BSS@2 NA|NA|NA HOOMBAJD_01218 1423732.BALS01000007_gene584 2.7e-39 167.5 Lactobacillaceae ptsH GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0043610,GO:0044424,GO:0044464,GO:0050789,GO:0065007 ko:K11189 ko00000,ko02000 4.A.2.1 Bacteria 1VA0R@1239,3F6XQ@33958,4HKGA@91061,COG1925@1,COG1925@2 NA|NA|NA G phosphocarrier protein HPR HOOMBAJD_01219 568703.LGG_01820 0.0 1108.6 Lactobacillaceae ptsI GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006810,GO:0008150,GO:0008643,GO:0008965,GO:0009401,GO:0016740,GO:0016772,GO:0016775,GO:0019197,GO:0032991,GO:0042802,GO:0043167,GO:0043169,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0051179,GO:0051234,GO:0071702 2.7.3.9 ko:K08483 ko02060,map02060 ko00000,ko00001,ko01000,ko02000 8.A.7 iB21_1397.B21_02277,iE2348C_1286.E2348C_2602,iEC042_1314.EC042_2625,iECBD_1354.ECBD_1265,iECB_1328.ECB_02316,iECD_1391.ECD_02316,iECH74115_1262.ECH74115_3647,iECIAI1_1343.ECIAI1_2474,iECIAI39_1322.ECIAI39_2562,iECO103_1326.ECO103_2935,iECO111_1330.ECO111_3146,iECO26_1355.ECO26_3469,iECP_1309.ECP_2440,iECSE_1348.ECSE_2707,iECSP_1301.ECSP_3364,iECUMN_1333.ECUMN_2738,iECW_1372.ECW_m2645,iECs_1301.ECs3288,iEKO11_1354.EKO11_1312,iEcE24377_1341.EcE24377A_2703,iEcHS_1320.EcHS_A2551,iEcSMS35_1347.EcSMS35_2571,iEcolC_1368.EcolC_1262,iLF82_1304.LF82_1770,iNRG857_1313.NRG857_12115,iSBO_1134.SBO_2440,iSDY_1059.SDY_2613,iSFV_1184.SFV_2468,iSF_1195.SF2471,iSFxv_1172.SFxv_2720,iSSON_1240.SSON_2505,iS_1188.S2617,iUMNK88_1353.UMNK88_3018,iWFL_1372.ECW_m2645,iZ_1308.Z3682 Bacteria 1TPK8@1239,3F3MS@33958,4H9VD@91061,COG1080@1,COG1080@2 NA|NA|NA G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) HOOMBAJD_01220 568703.LGG_01817 8.9e-254 882.5 Lactobacillaceae iolT ko:K06609 ko00000,ko02000 2.A.1.1.26 Bacteria 1TREV@1239,3F3ZS@33958,4HAN1@91061,COG0477@1,COG2814@2 NA|NA|NA EGP Major facilitator Superfamily HOOMBAJD_01222 568703.LGG_01815 1.6e-103 382.1 Lactobacillaceae thiT ko:K16789 ko00000,ko02000 2.A.88.3 Bacteria 1V6YE@1239,3F738@33958,4HIJE@91061,COG3859@1,COG3859@2 NA|NA|NA S Thiamine transporter protein (Thia_YuaJ) HOOMBAJD_01223 568703.LGG_01814 8.5e-79 299.7 Lactobacillaceae purE GO:0003674,GO:0003824,GO:0004638,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0016853,GO:0016866,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034023,GO:0034641,GO:0034654,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 5.4.99.18 ko:K01588 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 M00048 R07405 RC01947 ko00000,ko00001,ko00002,ko01000 iETEC_1333.ETEC_0575,iJN746.PP_5336,iPC815.YPO3076,iUTI89_1310.UTI89_C0551 Bacteria 1V1MV@1239,3F6P0@33958,4HFR7@91061,COG0041@1,COG0041@2 NA|NA|NA F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) HOOMBAJD_01224 568703.LGG_01813 2.7e-213 747.7 Lactobacillaceae purK GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 6.3.4.18 ko:K01589 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 M00048 R07404 RC01927 ko00000,ko00001,ko00002,ko01000 Bacteria 1TQCD@1239,3F3YV@33958,4H9M5@91061,COG0026@1,COG0026@2 NA|NA|NA F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) HOOMBAJD_01225 568703.LGG_01812 2.3e-133 481.5 Lactobacillaceae purC GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016874,GO:0016879,GO:0016881,GO:0044424,GO:0044444,GO:0044464 4.1.1.21,4.3.2.2,6.3.2.6 ko:K01587,ko:K01756,ko:K01923 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 M00048,M00049 R01083,R04209,R04559,R04591 RC00064,RC00162,RC00379,RC00444,RC00445,RC00590 ko00000,ko00001,ko00002,ko01000 iAF1260.b2476,iB21_1397.B21_02330,iBWG_1329.BWG_2240,iE2348C_1286.E2348C_2713,iEC042_1314.EC042_2677,iEC55989_1330.EC55989_2759,iECABU_c1320.ECABU_c27880,iECBD_1354.ECBD_1213,iECB_1328.ECB_02368,iECDH10B_1368.ECDH10B_2642,iECDH1ME8569_1439.ECDH1ME8569_2402,iECDH1ME8569_1439.EcDH1_1193,iECD_1391.ECD_02368,iECED1_1282.ECED1_2911,iECH74115_1262.ECH74115_3698,iECIAI1_1343.ECIAI1_2527,iECNA114_1301.ECNA114_2561,iECO103_1326.ECO103_2988,iECO111_1330.ECO111_3199,iECO26_1355.ECO26_3522,iECOK1_1307.ECOK1_2784,iECP_1309.ECP_2490,iECS88_1305.ECS88_2658,iECSE_1348.ECSE_2760,iECSF_1327.ECSF_2329,iECSP_1301.ECSP_3415,iECUMN_1333.ECUMN_2789,iECW_1372.ECW_m2698,iECs_1301.ECs3338,iEKO11_1354.EKO11_1259,iETEC_1333.ETEC_2581,iEcDH1_1363.EcDH1_1193,iEcE24377_1341.EcE24377A_2757,iEcHS_1320.EcHS_A2607,iEcSMS35_1347.EcSMS35_2623,iEcolC_1368.EcolC_1200,iG2583_1286.G2583_2999,iJN746.PP_1240,iJO1366.b2476,iJR904.b2476,iLF82_1304.LF82_1775,iNRG857_1313.NRG857_12360,iSFV_1184.SFV_2521,iSF_1195.SF2519,iSFxv_1172.SFxv_2773,iS_1188.S2669,iSbBS512_1146.SbBS512_E2848,iUMNK88_1353.UMNK88_3071,iWFL_1372.ECW_m2698,iY75_1357.Y75_RS12925,iYL1228.KPN_02810,iZ_1308.Z3735 Bacteria 1TP11@1239,3F44Z@33958,4H9U8@91061,COG0152@1,COG0152@2 NA|NA|NA F Belongs to the SAICAR synthetase family HOOMBAJD_01226 568703.LGG_01811 6.4e-41 172.9 Lactobacillaceae purS 6.3.2.6,6.3.5.3 ko:K01923,ko:K01952 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 M00048 R04463,R04591 RC00010,RC00064,RC00162,RC01160 ko00000,ko00001,ko00002,ko01000 iYO844.BSU06460 Bacteria 1VEH1@1239,3F81F@33958,4HP0E@91061,COG1828@1,COG1828@2 NA|NA|NA F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL HOOMBAJD_01227 568703.LGG_01810 3e-130 471.1 Lactobacillaceae purQ GO:0003674,GO:0003824,GO:0004642,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016020,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0040007,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.5.3 ko:K01952 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 M00048 R04463 RC00010,RC01160 ko00000,ko00001,ko00002,ko01000 Bacteria 1TP1B@1239,3F48D@33958,4HAKZ@91061,COG0047@1,COG0047@2 NA|NA|NA F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL HOOMBAJD_01228 568703.LGG_01809 0.0 1464.1 Lactobacillaceae purL GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0004642,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0017076,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046390,GO:0046483,GO:0046872,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.3.5.3 ko:K01952 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 M00048 R04463 RC00010,RC01160 ko00000,ko00001,ko00002,ko01000 Bacteria 1TPAS@1239,3F4IQ@33958,4HB3N@91061,COG0046@1,COG0046@2 NA|NA|NA F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL HOOMBAJD_01229 568703.LGG_01808 2.4e-278 964.1 Lactobacillaceae purF GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009507,GO:0009536,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464 2.4.2.14 ko:K00764 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 M00048 R01072 RC00010,RC02724,RC02752 ko00000,ko00001,ko00002,ko01000,ko01002 iSB619.SA_RS05225 Bacteria 1TPH3@1239,3F3U7@33958,4HAXU@91061,COG0034@1,COG0034@2 NA|NA|NA F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine HOOMBAJD_01230 568703.LGG_01807 1.3e-185 655.6 Lactobacillaceae purM GO:0003674,GO:0003824,GO:0004641,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016882,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.3.1,6.3.4.13 ko:K01933,ko:K11788 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 M00048 R04144,R04208 RC00090,RC00166,RC01100 ko00000,ko00001,ko00002,ko01000 iAF987.Gmet_1844,iECSF_1327.ECSF_2340 Bacteria 1TP9J@1239,3F4RT@33958,4HABW@91061,COG0150@1,COG0150@2 NA|NA|NA F Phosphoribosylformylglycinamidine cyclo-ligase HOOMBAJD_01231 568703.LGG_01806 1.1e-98 365.9 Lactobacillaceae purN 2.1.2.2 ko:K11175 ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130 M00048 R04325,R04326 RC00026,RC00197,RC01128 ko00000,ko00001,ko00002,ko01000 Bacteria 1V3RJ@1239,3F3UN@33958,4HGY5@91061,COG0299@1,COG0299@2 NA|NA|NA F Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate HOOMBAJD_01232 568703.LGG_01805 1.3e-287 995.0 Lactobacillaceae purH GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0044464,GO:0071944 2.1.2.3,3.5.4.10 ko:K00602 ko00230,ko00670,ko01100,ko01110,ko01130,ko01523,map00230,map00670,map01100,map01110,map01130,map01523 M00048 R01127,R04560 RC00026,RC00263,RC00456 ko00000,ko00001,ko00002,ko01000,ko04147 iJN678.purH Bacteria 1TPQ5@1239,3F4FD@33958,4H9YY@91061,COG0138@1,COG0138@2 NA|NA|NA F Bifunctional purine biosynthesis protein PurH HOOMBAJD_01233 568703.LGG_01803 1.1e-220 772.3 Lactobacillaceae purD 6.3.4.13 ko:K01945 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 M00048 R04144 RC00090,RC00166 ko00000,ko00001,ko00002,ko01000 iSB619.SA_RS05245,iYO844.BSU06530 Bacteria 1UHN9@1239,3F4Z8@33958,4HA70@91061,COG0151@1,COG0151@2 NA|NA|NA F Belongs to the GARS family HOOMBAJD_01234 568703.LGG_01802 2.7e-76 291.2 Lactobacillaceae copR Bacteria 1VA7Q@1239,3F7D0@33958,4HKGF@91061,COG3682@1,COG3682@2 NA|NA|NA K Copper transport repressor CopY TcrY HOOMBAJD_01235 568703.LGG_01801 0.0 1295.4 Lactobacillaceae copB 3.6.3.4 ko:K01533 R00086 RC00002 ko00000,ko01000 3.A.3.5 Bacteria 1TP5S@1239,3F4IX@33958,4HAI0@91061,COG2217@1,COG2217@2 NA|NA|NA P P-type ATPase HOOMBAJD_01236 568703.LGG_01800 3.2e-109 401.0 Lactobacillaceae nrdG GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008998,GO:0009058,GO:0009117,GO:0009165,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0015949,GO:0016491,GO:0016725,GO:0016728,GO:0018130,GO:0019438,GO:0019637,GO:0019692,GO:0031250,GO:0032991,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046385,GO:0046483,GO:0048037,GO:0051536,GO:0051539,GO:0051540,GO:0055086,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901576 1.97.1.4 ko:K04068 R04710 ko00000,ko01000 iE2348C_1286.E2348C_4563 Bacteria 1V1HG@1239,3F46H@33958,4HGJ9@91061,COG0602@1,COG0602@2 NA|NA|NA O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine HOOMBAJD_01237 568703.LGG_01799 2.8e-207 727.6 Lactobacillaceae Bacteria 1TSIC@1239,3FBXD@33958,4HCB6@91061,COG0642@1,COG2205@2 NA|NA|NA T PhoQ Sensor HOOMBAJD_01238 568703.LGG_01798 7.7e-123 446.8 Lactobacillaceae Bacteria 1TR32@1239,3F5NZ@33958,4HAUJ@91061,COG0745@1,COG0745@2 NA|NA|NA K response regulator HOOMBAJD_01239 568703.LGG_01796 2.6e-138 498.0 Lactobacillaceae bceA ko:K02003,ko:K11631,ko:K19079 ko01503,ko02010,ko02020,ko05150,map01503,map02010,map02020,map05150 M00258,M00314,M00730,M00732,M00737,M00738 ko00000,ko00001,ko00002,ko01504,ko02000 3.A.1,3.A.1.134.3,3.A.1.134.7 Bacteria 1TNZG@1239,3F5FY@33958,4H9UT@91061,COG1136@1,COG1136@2 NA|NA|NA V ABC transporter HOOMBAJD_01240 568703.LGG_01795 0.0 1260.0 Lactobacillaceae ko:K02004 M00258 ko00000,ko00002,ko02000 3.A.1 Bacteria 1TR2D@1239,3F5VK@33958,4H9SH@91061,COG0577@1,COG0577@2 NA|NA|NA V ABC transporter (permease) HOOMBAJD_01241 568703.LGG_01794 7.6e-91 339.7 Lactobacillaceae traP GO:0005575,GO:0016020 1.14.99.57,6.2.1.3 ko:K01897,ko:K21481 ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920 M00086 R01280 RC00004,RC00014 ko00000,ko00001,ko00002,ko01000,ko01004,ko04147 4.C.1.1 Bacteria 1U6YF@1239,3F8QA@33958,4IGSM@91061,COG2329@1,COG2329@2 NA|NA|NA S Antibiotic biosynthesis monooxygenase HOOMBAJD_01242 568703.LGG_01793 9.3e-138 496.1 Lactobacillaceae yhfI GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0031123,GO:0034414,GO:0034470,GO:0034641,GO:0034660,GO:0040007,GO:0042779,GO:0042780,GO:0042781,GO:0043170,GO:0043628,GO:0044237,GO:0044238,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1905267 Bacteria 1V1TF@1239,3F4U0@33958,4HFNV@91061,COG1234@1,COG1234@2 NA|NA|NA S Metallo-beta-lactamase superfamily HOOMBAJD_01243 543734.LCABL_19550 1.5e-65 255.4 Lactobacillaceae spxA 1.20.4.1 ko:K00537,ko:K16509 ko00000,ko01000 Bacteria 1V3QC@1239,3F6HJ@33958,4HH0I@91061,COG1393@1,COG1393@2 NA|NA|NA K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress HOOMBAJD_01244 568703.LGG_01791 5.1e-122 443.7 Lactobacillaceae mecA GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 ko:K16511 ko00000 Bacteria 1UZ7D@1239,3F5G4@33958,4HID6@91061,COG4862@1,COG4862@2 NA|NA|NA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis HOOMBAJD_01245 568703.LGG_01790 1.4e-304 1051.6 Lactobacillaceae glpQ 3.1.4.46 ko:K01126 ko00564,map00564 R01030,R01470 RC00017,RC00425 ko00000,ko00001,ko01000 Bacteria 1UG1C@1239,3F3SZ@33958,4HCPQ@91061,COG0584@1,COG0584@2,COG4781@1,COG4781@2 NA|NA|NA C phosphodiesterase HOOMBAJD_01246 568703.LGG_01789 1.2e-177 629.0 Lactobacillaceae pyrD GO:0003674,GO:0003824,GO:0004152,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006206,GO:0006207,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009987,GO:0016491,GO:0016627,GO:0016635,GO:0018130,GO:0019856,GO:0034641,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046112,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.3.1.14,1.3.98.1 ko:K00226,ko:K02823,ko:K17828 ko00240,ko01100,map00240,map01100 M00051 R01867,R01869 RC00051 ko00000,ko00001,ko00002,ko01000 Bacteria 1TPFV@1239,3FC4P@33958,4HBFE@91061,COG0167@1,COG0167@2 NA|NA|NA F Catalyzes the conversion of dihydroorotate to orotate HOOMBAJD_01247 568703.LGG_01788 7.9e-22 109.0 Lactobacillaceae Bacteria 1U8CT@1239,29QNK@1,30BN8@2,3FAUE@33958,4IIAS@91061 NA|NA|NA HOOMBAJD_01248 568703.LGG_01787 1.3e-66 258.8 Lactobacillaceae Bacteria 1U6R7@1239,2A8KV@1,30XP9@2,3F8CJ@33958,4IGII@91061 NA|NA|NA HOOMBAJD_01250 568703.LGG_01786 0.0 1109.0 Lactobacillaceae argS GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.19 ko:K01887 ko00970,map00970 M00359,M00360 R03646 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Bacteria 1TPEZ@1239,3F4DE@33958,4HAR3@91061,COG0018@1,COG0018@2 NA|NA|NA J Arginyl-tRNA synthetase HOOMBAJD_01251 568703.LGG_01785 5.3e-75 287.0 Lactobacillaceae argR GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0006355,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0019219,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032991,GO:0032993,GO:0043565,GO:0044212,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:2000112,GO:2001141 ko:K03402 ko00000,ko03000 Bacteria 1V1R7@1239,3FBR5@33958,4HN5H@91061,COG1438@1,COG1438@2 NA|NA|NA K Regulates arginine biosynthesis genes HOOMBAJD_01252 568703.LGG_01784 1.9e-155 555.1 Lactobacillaceae rluA GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 5.4.99.23 ko:K06180 ko00000,ko01000,ko03009 Bacteria 1TSM6@1239,3F50K@33958,4HA7M@91061,COG0564@1,COG0564@2 NA|NA|NA J Responsible for synthesis of pseudouridine from uracil HOOMBAJD_01253 568703.LGG_01783 0.0 1345.1 Lactobacillaceae pbp2A 2.4.1.129,3.4.16.4 ko:K03693,ko:K05365,ko:K05366,ko:K12555,ko:K21464 ko00550,ko01100,ko01501,map00550,map01100,map01501 R04519 RC00005,RC00049 ko00000,ko00001,ko01000,ko01003,ko01011 GT51 Bacteria 1TPM5@1239,3F49Q@33958,4H9SA@91061,COG0744@1,COG0744@2 NA|NA|NA M penicillin-binding protein HOOMBAJD_01254 568703.LGG_01782 1e-54 219.2 Lactobacillaceae yheA Bacteria 1V62T@1239,3FBP8@33958,4IRH3@91061,COG3679@1,COG3679@2 NA|NA|NA S Control of competence regulator ComK, YlbF/YmcA HOOMBAJD_01255 568703.LGG_01781 9.6e-183 646.0 Lactobacillaceae yhaM GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0031123,GO:0031125,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043628,GO:0044085,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 ko:K03698 ko00000,ko01000,ko03019 Bacteria 1TPIU@1239,3F4SF@33958,4HB1M@91061,COG3481@1,COG3481@2 NA|NA|NA S Metal dependent phosphohydrolases with conserved 'HD' motif. HOOMBAJD_01256 568703.LGG_01780 5.8e-158 563.5 Lactobacillaceae prsA 5.2.1.8 ko:K02597,ko:K07533 ko00000,ko01000,ko03110 Bacteria 1TX3R@1239,3F45W@33958,4HC85@91061,COG0760@1,COG0760@2 NA|NA|NA M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins HOOMBAJD_01257 568703.LGG_01779 7.4e-48 196.4 Lactobacillaceae yhaH Bacteria 1VM8M@1239,3F7TT@33958,4HR25@91061,COG4980@1,COG4980@2 NA|NA|NA S YtxH-like protein HOOMBAJD_01258 568703.LGG_01778 3.2e-74 284.3 Lactobacillaceae hit ko:K02503 ko00000,ko04147 Bacteria 1V9ZJ@1239,3F6K5@33958,4HIG2@91061,COG0537@1,COG0537@2 NA|NA|NA FG histidine triad HOOMBAJD_01259 568703.LGG_01777 1.7e-131 475.3 Lactobacillaceae ecsA ko:K01990 M00254 ko00000,ko00002,ko02000 3.A.1 Bacteria 1TQIH@1239,3F444@33958,4HA2B@91061,COG1131@1,COG1131@2 NA|NA|NA V ABC transporter, ATP-binding protein HOOMBAJD_01260 568703.LGG_01776 1.8e-223 781.6 Lactobacillaceae ecsB ko:K01992 M00254 ko00000,ko00002,ko02000 3.A.1 Bacteria 1V1VG@1239,3F4HH@33958,4HG1K@91061,COG4473@1,COG4473@2 NA|NA|NA U ABC transporter HOOMBAJD_01261 568703.LGG_01775 1.2e-148 532.3 Lactobacillaceae ytmP 2.7.1.89 ko:K07251 ko00730,ko01100,map00730,map01100 R02134 RC00002,RC00017 ko00000,ko00001,ko01000 Bacteria 1UMFY@1239,3F4GU@33958,4HBF9@91061,COG0510@1,COG0510@2 NA|NA|NA M Choline/ethanolamine kinase HOOMBAJD_01262 568703.LGG_01774 2.2e-119 434.9 Lactobacillaceae trmB GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008176,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0034708,GO:0036265,GO:0040007,GO:0043170,GO:0043412,GO:0043414,GO:0043527,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0106004,GO:0140098,GO:0140101,GO:1901360,GO:1902494,GO:1990234 2.1.1.297,2.1.1.33 ko:K02493,ko:K03439 R10806 RC00003,RC03279 ko00000,ko01000,ko03012,ko03016 Bacteria 1TQCA@1239,3F3QM@33958,4HC08@91061,COG0220@1,COG0220@2 NA|NA|NA J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA HOOMBAJD_01264 568703.LGG_01772 7.2e-55 219.5 Lactobacillaceae ytpP GO:0003674,GO:0003824,GO:0004791,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0015035,GO:0015036,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0016671,GO:0019725,GO:0033554,GO:0034599,GO:0042221,GO:0042592,GO:0044424,GO:0044444,GO:0044464,GO:0045454,GO:0047134,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748 2.7.1.180,5.3.4.1 ko:K01829,ko:K03671,ko:K03734,ko:K06196 ko04621,ko05418,map04621,map05418 ko00000,ko00001,ko01000,ko02000,ko03110 5.A.1.2 Bacteria 1VAS6@1239,3F72K@33958,4HKGM@91061,COG0526@1,COG0526@2 NA|NA|NA CO Thioredoxin HOOMBAJD_01265 568703.LGG_01771 6.9e-113 413.3 Lactobacillaceae pheT GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 ko:K01890,ko:K06878 ko00970,map00970 M00359,M00360 R03660 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Bacteria 1V7QA@1239,3FBJ0@33958,4HJBD@91061,COG0073@1,COG0073@2 NA|NA|NA J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily HOOMBAJD_01267 568703.LGG_01769 0.0 1343.2 Lactobacillaceae sftA ko:K03466 ko00000,ko03036 3.A.12 Bacteria 1TPJR@1239,3F441@33958,4HA1S@91061,COG1674@1,COG1674@2 NA|NA|NA D Belongs to the FtsK SpoIIIE SftA family HOOMBAJD_01268 568703.LGG_01768 4.1e-253 880.2 Lactobacillaceae mpl GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0016874,GO:0016879,GO:0016881,GO:0042802,GO:0044424,GO:0044464 6.3.2.4,6.3.2.45,6.3.2.8 ko:K01921,ko:K01924,ko:K02558 ko00471,ko00473,ko00550,ko01100,ko01502,map00471,map00473,map00550,map01100,map01502 R01150,R03193 RC00064,RC00141 ko00000,ko00001,ko01000,ko01011 iSDY_1059.SDY_4251 Bacteria 1TQ5H@1239,3F49J@33958,4HAR4@91061,COG0773@1,COG0773@2 NA|NA|NA M Belongs to the MurCDEF family HOOMBAJD_01269 568703.LGG_01767 4.5e-264 916.8 Bacilli ko:K02538 ko00000,ko03000 Bacteria 1V0R0@1239,4HE1S@91061,COG3711@1,COG3711@2 NA|NA|NA K Mga helix-turn-helix domain HOOMBAJD_01270 568703.LGG_01766 0.0 2128.2 Lactobacillaceae Bacteria 1TVFF@1239,3F9JA@33958,4I2CX@91061,COG5492@1,COG5492@2 NA|NA|NA N domain, Protein HOOMBAJD_01271 568703.LGG_01765 3.8e-137 494.2 Lactobacillaceae Bacteria 1U7AF@1239,29Q0J@1,30AZ1@2,3F97I@33958,4IH5E@91061 NA|NA|NA S WxL domain surface cell wall-binding HOOMBAJD_01273 568703.LGG_01763 3.1e-187 661.0 Lactobacillaceae Bacteria 1VCXS@1239,3F5HA@33958,4HKJG@91061,COG4072@1,COG4072@2 NA|NA|NA S Cell surface protein HOOMBAJD_01275 568703.LGG_01762 7.9e-118 429.9 Lactobacillaceae ybhL GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K06890 ko00000 Bacteria 1V9CJ@1239,3FBMQ@33958,4HM3D@91061,COG0670@1,COG0670@2 NA|NA|NA S Inhibitor of apoptosis-promoting Bax1 HOOMBAJD_01276 568703.LGG_01761 0.0 1717.6 Lactobacillaceae polA GO:0003674,GO:0003824,GO:0003887,GO:0004518,GO:0004527,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008409,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0018130,GO:0019438,GO:0030312,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0040007,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0071944,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901362,GO:1901576 2.7.7.7 ko:K02335 ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko01000,ko03032,ko03400 Bacteria 1TPKJ@1239,3F3ZA@33958,4H9S7@91061,COG0258@1,COG0258@2,COG0749@1,COG0749@2 NA|NA|NA L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity HOOMBAJD_01277 568703.LGG_01760 3.2e-158 564.3 Lactobacillaceae fpg 3.2.2.23,4.2.99.18 ko:K10563 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Bacteria 1TPM9@1239,3F43E@33958,4H9Q7@91061,COG0266@1,COG0266@2 NA|NA|NA L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates HOOMBAJD_01278 568703.LGG_01759 1.5e-101 375.6 Lactobacillaceae coaE 2.7.1.24 ko:K00859 ko00770,ko01100,map00770,map01100 M00120 R00130 RC00002,RC00078 ko00000,ko00001,ko00002,ko01000 Bacteria 1V6FS@1239,3F6WF@33958,4HII3@91061,COG0237@1,COG0237@2 NA|NA|NA F Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A HOOMBAJD_01279 568703.LGG_01758 3.3e-80 304.3 Lactobacillaceae nrdR GO:0000166,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008144,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0017076,GO:0019219,GO:0019222,GO:0030554,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 ko:K07738 ko00000,ko03000 Bacteria 1V3JA@1239,3F65S@33958,4HGXA@91061,COG1327@1,COG1327@2 NA|NA|NA K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes HOOMBAJD_01280 568703.LGG_01757 2.1e-249 867.8 Lactobacillaceae dnaB ko:K03346 ko00000,ko03032 Bacteria 1TSBB@1239,3F5D7@33958,4H9RI@91061,COG3611@1,COG3611@2 NA|NA|NA L replication initiation and membrane attachment HOOMBAJD_01281 568703.LGG_01756 2e-169 601.7 Lactobacillaceae dnaI GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0034641,GO:0034645,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576,GO:1990837 ko:K11144 ko00000,ko03032 Bacteria 1TPZX@1239,3F4JK@33958,4HABS@91061,COG1484@1,COG1484@2 NA|NA|NA L Primosomal protein DnaI HOOMBAJD_01282 568703.LGG_01754 0.0 1332.8 Lactobacillaceae thrS GO:0003674,GO:0003824,GO:0004812,GO:0004829,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006435,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.3 ko:K01868 ko00970,map00970 M00359,M00360 R03663 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Bacteria 1TP78@1239,3F3TC@33958,4HABZ@91061,COG0441@1,COG0441@2 NA|NA|NA J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) HOOMBAJD_01283 543734.LCABL_19200 2.3e-59 235.3 Lactobacillaceae yrgI 5.4.2.11 ko:K01834 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230 M00001,M00002,M00003 R01518 RC00536 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Bacteria 1V8SE@1239,3F86H@33958,4HJCU@91061,COG0406@1,COG0406@2 NA|NA|NA G Histidine phosphatase superfamily (branch 1) HOOMBAJD_01284 568703.LGG_01753 1.2e-64 252.3 Lactobacillaceae Bacteria 1U7IT@1239,29Q5P@1,30B4K@2,3F9S3@33958,4IHFJ@91061 NA|NA|NA HOOMBAJD_01285 568703.LGG_01752 5.9e-126 456.8 Lactobacillaceae Bacteria 1VJJ0@1239,2DMFR@1,32R83@2,3F9AJ@33958,4HQP8@91061 NA|NA|NA S SseB protein N-terminal domain HOOMBAJD_01286 568703.LGG_01751 3.6e-134 484.2 Lactobacillaceae cobB ko:K12410 ko00000,ko01000 Bacteria 1TQKD@1239,3F74B@33958,4HC4I@91061,COG0846@1,COG0846@2 NA|NA|NA K Sir2 family HOOMBAJD_01287 568703.LGG_01750 1.6e-231 808.5 Lactobacillaceae Bacteria 1UHNW@1239,3FCCP@33958,4IS4S@91061,COG0477@1,COG0477@2 NA|NA|NA EGP Major Facilitator Superfamily HOOMBAJD_01288 568703.LGG_01748 9e-72 276.2 Lactobacillaceae Bacteria 1VG8M@1239,3F6QY@33958,4HYHM@91061,COG1959@1,COG1959@2 NA|NA|NA K Transcriptional regulator HOOMBAJD_01289 568703.LGG_01747 8.9e-78 296.2 Lactobacillaceae infC GO:0000049,GO:0001731,GO:0002181,GO:0002183,GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006412,GO:0006413,GO:0006417,GO:0006446,GO:0006518,GO:0006807,GO:0006950,GO:0006996,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009266,GO:0009409,GO:0009628,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0016020,GO:0016043,GO:0019222,GO:0019538,GO:0022411,GO:0022607,GO:0022613,GO:0022618,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031334,GO:0032268,GO:0032270,GO:0032790,GO:0032984,GO:0032988,GO:0032991,GO:0034248,GO:0034250,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0043021,GO:0043022,GO:0043024,GO:0043043,GO:0043170,GO:0043254,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0045727,GO:0045948,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065003,GO:0065007,GO:0070992,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0080090,GO:0097159,GO:1901193,GO:1901195,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903008,GO:1904688,GO:1904690,GO:1990856,GO:1990904,GO:2000112,GO:2000765,GO:2000767 ko:K02520 ko00000,ko03012,ko03029 Bacteria 1V1RC@1239,3F4MS@33958,4HFUS@91061,COG0290@1,COG0290@2 NA|NA|NA J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins HOOMBAJD_01290 543734.LCABL_19160 9e-27 125.6 Lactobacillaceae rpmI GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 ko:K02916 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1VF5W@1239,3F7CQ@33958,4HNIQ@91061,COG0291@1,COG0291@2 NA|NA|NA J Belongs to the bacterial ribosomal protein bL35 family HOOMBAJD_01291 568703.LGG_01745 1.1e-56 225.7 Lactobacillaceae rplT GO:0000027,GO:0000900,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006355,GO:0006412,GO:0006417,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015934,GO:0016020,GO:0016043,GO:0017148,GO:0019219,GO:0019222,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0030371,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045182,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0051252,GO:0060255,GO:0065003,GO:0065007,GO:0070180,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0080090,GO:0090079,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903506,GO:1990904,GO:2000112,GO:2000113,GO:2001141 ko:K02887 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1V6DB@1239,3F6HZ@33958,4HH2W@91061,COG0292@1,COG0292@2 NA|NA|NA J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit HOOMBAJD_01292 568703.LGG_01744 3.4e-100 370.9 Lactobacillaceae yvdD 3.2.2.10 ko:K06966 ko00230,ko00240,map00230,map00240 R00182,R00510 RC00063,RC00318 ko00000,ko00001,ko01000 Bacteria 1UKED@1239,3F5U4@33958,4HE2X@91061,COG1611@1,COG1611@2 NA|NA|NA S Belongs to the LOG family HOOMBAJD_01293 568703.LGG_01743 1.3e-179 635.6 Lactobacillaceae 3.5.1.10 ko:K01433 ko00630,ko00670,map00630,map00670 R00944 RC00026,RC00111 ko00000,ko00001,ko01000 Bacteria 1V7QI@1239,3F69N@33958,4HJMD@91061,COG0604@1,COG0604@2 NA|NA|NA C Alcohol dehydrogenase GroES-like domain HOOMBAJD_01294 568703.LGG_01742 1.8e-121 441.8 Lactobacillaceae mhqD ko:K06999 ko00000 Bacteria 1TPBY@1239,3F6EM@33958,4HB45@91061,COG0400@1,COG0400@2 NA|NA|NA S Dienelactone hydrolase family HOOMBAJD_01295 568703.LGG_01741 4e-189 667.2 Lactobacillaceae mhqA 3.4.21.26 ko:K01322,ko:K15975 ko04614,map04614 ko00000,ko00001,ko01000,ko01002 Bacteria 1TP7I@1239,3F4PB@33958,4H9ND@91061,COG0346@1,COG0346@2 NA|NA|NA E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HOOMBAJD_01296 568703.LGG_01740 8e-168 596.3 Lactobacillaceae ykcA Bacteria 1VWUR@1239,3FB66@33958,4HXTS@91061,COG0346@1,COG0346@2 NA|NA|NA E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HOOMBAJD_01297 568703.LGG_01739 2.4e-95 354.8 Lactobacillaceae yqeG ko:K07015 ko00000 Bacteria 1V6KM@1239,3F46V@33958,4HGAV@91061,COG2179@1,COG2179@2 NA|NA|NA S HAD phosphatase, family IIIA HOOMBAJD_01298 568703.LGG_01738 4e-217 760.4 Lactobacillaceae yqeH GO:0003674,GO:0003824,GO:0003924,GO:0006275,GO:0008150,GO:0008156,GO:0009889,GO:0009890,GO:0009892,GO:0010556,GO:0010558,GO:0010605,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0019219,GO:0019222,GO:0022613,GO:0030174,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032297,GO:0042254,GO:0044085,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051052,GO:0051053,GO:0051171,GO:0051172,GO:0060255,GO:0065007,GO:0071840,GO:0080090,GO:0090329,GO:2000104,GO:2000112,GO:2000113 ko:K06948 ko00000,ko03009 Bacteria 1TPM2@1239,3F4JU@33958,4HAAF@91061,COG1161@1,COG1161@2 NA|NA|NA S Ribosome biogenesis GTPase YqeH HOOMBAJD_01299 568703.LGG_01737 1.1e-47 195.7 Lactobacillaceae yhbY GO:0000027,GO:0000028,GO:0000966,GO:0000967,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016072,GO:0022607,GO:0022613,GO:0022618,GO:0034470,GO:0034471,GO:0034622,GO:0034641,GO:0034660,GO:0042254,GO:0042255,GO:0042273,GO:0042274,GO:0043021,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:1901360,GO:1990275 ko:K07574 ko00000,ko03009 Bacteria 1VEGM@1239,3F7EW@33958,4HKC7@91061,COG1534@1,COG1534@2 NA|NA|NA J RNA-binding protein HOOMBAJD_01300 1423816.BACQ01000007_gene136 9.4e-118 429.5 Lactobacillaceae nadD GO:0000309,GO:0003674,GO:0003824,GO:0004515,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0040007,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.7.18,3.6.1.55 ko:K00969,ko:K03574 ko00760,ko01100,map00760,map01100 M00115 R00137,R03005 RC00002 ko00000,ko00001,ko00002,ko01000,ko03400 Bacteria 1V3SK@1239,3F4D6@33958,4HGXK@91061,COG1057@1,COG1057@2 NA|NA|NA H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) HOOMBAJD_01301 568703.LGG_01735 2.5e-109 401.4 Lactobacillaceae nadD 2.7.6.3,2.7.7.18 ko:K00950,ko:K00969,ko:K06950 ko00760,ko00790,ko01100,map00760,map00790,map01100 M00115,M00126,M00841 R00137,R03005,R03503 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 Bacteria 1V6Y1@1239,3F47C@33958,4HHRY@91061,COG1713@1,COG1713@2 NA|NA|NA H Hydrolase, HD family HOOMBAJD_01302 568703.LGG_01734 1.9e-59 235.0 Lactobacillaceae rsfS GO:0003674,GO:0005488,GO:0006417,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0017148,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0034248,GO:0034249,GO:0043021,GO:0043023,GO:0044087,GO:0044877,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0080090,GO:0090069,GO:0090071,GO:2000112,GO:2000113 ko:K09710 ko00000,ko03009 Bacteria 1VA2Z@1239,3F7QN@33958,4HKEJ@91061,COG0799@1,COG0799@2 NA|NA|NA J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation HOOMBAJD_01303 568703.LGG_01733 5.8e-140 503.4 Lactobacillaceae yqeM Bacteria 1TQUF@1239,3F4KM@33958,4HD2W@91061,COG0500@1,COG2226@2 NA|NA|NA Q Methyltransferase HOOMBAJD_01304 568703.LGG_01732 1.3e-207 728.8 Lactobacillaceae ylbM Bacteria 1TPP2@1239,3F3QC@33958,4HAZJ@91061,COG1323@1,COG1323@2 NA|NA|NA S Belongs to the UPF0348 family HOOMBAJD_01305 568703.LGG_01731 2.1e-94 351.7 Lactobacillaceae yceD GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0040007,GO:0044424,GO:0044444,GO:0044464 ko:K07040 ko00000 Bacteria 1VB08@1239,3F61Z@33958,4HME9@91061,COG1399@1,COG1399@2 NA|NA|NA S Uncharacterized ACR, COG1399 HOOMBAJD_01306 568703.LGG_01727 7.2e-272 942.6 Lactobacillaceae gnd GO:0003674,GO:0003824,GO:0004616,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006081,GO:0006082,GO:0006098,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009117,GO:0009987,GO:0016052,GO:0016054,GO:0016491,GO:0016614,GO:0016616,GO:0019362,GO:0019520,GO:0019521,GO:0019637,GO:0019682,GO:0019693,GO:0019752,GO:0032787,GO:0034641,GO:0042802,GO:0042803,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044262,GO:0044275,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046176,GO:0046177,GO:0046395,GO:0046483,GO:0046496,GO:0046983,GO:0051156,GO:0051186,GO:0055086,GO:0055114,GO:0071704,GO:0072329,GO:0072524,GO:1901135,GO:1901360,GO:1901564,GO:1901575 1.1.1.343,1.1.1.44 ko:K00033 ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200 M00004,M00006 R01528,R10221 RC00001,RC00539 ko00000,ko00001,ko00002,ko01000 iECS88_1305.ECS88_2128,iECW_1372.ECW_m2189,iEKO11_1354.EKO11_1765,iPC815.YPO1541,iWFL_1372.ECW_m2189 Bacteria 1TP4I@1239,3F3S8@33958,4H9NC@91061,COG0362@1,COG0362@2 NA|NA|NA H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH HOOMBAJD_01307 543734.LCABL_18980 7.9e-123 446.4 Lactobacillaceae Bacteria 1TS81@1239,3F421@33958,4H9NE@91061,COG0745@1,COG0745@2 NA|NA|NA K response regulator HOOMBAJD_01308 568703.LGG_01725 2.1e-288 997.7 Lactobacillaceae arlS GO:0003674,GO:0003824,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0043170,GO:0044238,GO:0070011,GO:0071704,GO:0140096,GO:1901564 2.7.13.3 ko:K18940 ko02020,map02020 M00716,M00717 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Bacteria 1TPSK@1239,3F3NU@33958,4HAH5@91061,COG5002@1,COG5002@2 NA|NA|NA T Histidine kinase HOOMBAJD_01309 568703.LGG_01724 4.5e-180 637.1 Lactobacillaceae yidC ko:K03217 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 ko00000,ko00001,ko00002,ko02044,ko03029 2.A.9 Bacteria 1TSDN@1239,3F3P3@33958,4HCC8@91061,COG0706@1,COG0706@2 NA|NA|NA U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins HOOMBAJD_01310 568703.LGG_01723 2.4e-46 191.0 Lactobacillaceae acyP GO:0003674,GO:0003824,GO:0003998,GO:0006950,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0016787,GO:0016817,GO:0016818,GO:0050896 3.6.1.7 ko:K01512 ko00620,ko00627,ko01120,map00620,map00627,map01120 R00317,R01421,R01515 RC00043 ko00000,ko00001,ko01000 iSB619.SA_RS07020,iSBO_1134.SBO_2263,iSF_1195.SF0969,iSFxv_1172.SFxv_1053,iS_1188.S1036 Bacteria 1VEM9@1239,3F81R@33958,4HNN7@91061,COG1254@1,COG1254@2 NA|NA|NA C Belongs to the acylphosphatase family HOOMBAJD_01311 568703.LGG_01721 1.8e-136 491.9 Lactobacillaceae spoU 2.1.1.185 ko:K03218,ko:K03437 ko00000,ko01000,ko03009,ko03016 Bacteria 1V3JP@1239,3F3NF@33958,4HCF5@91061,COG0566@1,COG0566@2 NA|NA|NA J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family HOOMBAJD_01312 1423732.BALS01000034_gene290 5.6e-94 350.1 Lactobacillaceae XK27_09705 6.1.1.14 ko:K01879,ko:K06950 ko00970,map00970 M00360 R03654 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Bacteria 1V4QX@1239,3F64N@33958,4HHW0@91061,COG1418@1,COG1418@2 NA|NA|NA S Metal dependent phosphohydrolases with conserved 'HD' motif. HOOMBAJD_01313 568703.LGG_01719 6.9e-68 263.1 Lactobacillaceae yodB Bacteria 1VBI7@1239,3F7FK@33958,4HKBR@91061,COG1733@1,COG1733@2 NA|NA|NA K Transcriptional regulator, HxlR family HOOMBAJD_01314 568703.LGG_01718 1.3e-201 708.8 Lactobacillaceae pheS GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.20 ko:K01889 ko00970,map00970 M00359,M00360 R03660 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Bacteria 1TPFW@1239,3F4NT@33958,4HAVN@91061,COG0016@1,COG0016@2 NA|NA|NA J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily HOOMBAJD_01315 568703.LGG_01717 0.0 1597.4 Lactobacillaceae pheT GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0030312,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0040007,GO:0042802,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 ko:K01890 ko00970,map00970 M00359,M00360 R03660 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 iG2583_1286.G2583_2160,iPC815.YPO2428 Bacteria 1TP98@1239,3F3V3@33958,4HAQ9@91061,COG0072@1,COG0072@2 NA|NA|NA J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily HOOMBAJD_01316 568703.LGG_01715 2.5e-206 724.5 Lactobacillaceae mltG ko:K07082 ko00000 Bacteria 1TS48@1239,3F4IG@33958,4HAUV@91061,COG1559@1,COG1559@2 NA|NA|NA S Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation HOOMBAJD_01317 568703.LGG_01714 1.2e-114 419.1 Lactobacillaceae udk GO:0003674,GO:0003824,GO:0004849,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006213,GO:0006220,GO:0006221,GO:0006222,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008655,GO:0009058,GO:0009112,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009173,GO:0009174,GO:0009218,GO:0009220,GO:0009224,GO:0009259,GO:0009260,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0043094,GO:0043097,GO:0043174,GO:0043771,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046035,GO:0046049,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.7.1.48 ko:K00876 ko00240,ko00983,ko01100,map00240,map00983,map01100 R00513,R00516,R00517,R00962,R00964,R00967,R00968,R00970,R01548,R01549,R01880,R02091,R02096,R02097,R02327,R02332,R02371,R02372,R08232 RC00002,RC00017 ko00000,ko00001,ko01000 iSBO_1134.SBO_0893 Bacteria 1TQ4V@1239,3F3KE@33958,4HAVR@91061,COG0572@1,COG0572@2 NA|NA|NA F Cytidine monophosphokinase HOOMBAJD_01318 568703.LGG_01713 9e-78 296.2 Lactobacillaceae greA GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0018130,GO:0019438,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:1901360,GO:1901362,GO:1901576 ko:K03624 ko00000,ko03021 Bacteria 1V44S@1239,3F4ZF@33958,4HGZU@91061,COG0782@1,COG0782@2 NA|NA|NA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides HOOMBAJD_01319 568703.LGG_01712 2.3e-122 444.9 Lactobacillaceae yvqF ko:K11622 ko02020,map02020 ko00000,ko00001 Bacteria 1V3D0@1239,3F5S1@33958,4HDIA@91061,COG4758@1,COG4758@2 NA|NA|NA S Cell wall-active antibiotics response 4TMS YvqF HOOMBAJD_01320 568703.LGG_01711 3e-182 644.4 Lactobacillaceae vraS 2.7.13.3 ko:K07673,ko:K07681,ko:K11617 ko02020,map02020 M00471,M00480,M00481,M00754 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Bacteria 1TPDG@1239,3FC2U@33958,4HC7E@91061,COG4585@1,COG4585@2 NA|NA|NA T Histidine kinase HOOMBAJD_01321 568703.LGG_01710 5.8e-115 420.2 Lactobacillaceae vraR ko:K07694,ko:K11618 ko02020,map02020 M00480,M00481,M00754 ko00000,ko00001,ko00002,ko02022 Bacteria 1TQ1U@1239,3F4DN@33958,4HA4B@91061,COG2197@1,COG2197@2 NA|NA|NA K helix_turn_helix, Lux Regulon HOOMBAJD_01322 568703.LGG_01709 1.4e-52 211.8 Lactobacillaceae yneR Bacteria 1VEQE@1239,3F7SB@33958,4HNU2@91061,COG4841@1,COG4841@2 NA|NA|NA S Belongs to the HesB IscA family HOOMBAJD_01323 568703.LGG_01708 0.0 1696.8 Lactobacillaceae Bacteria 1TRR1@1239,3FC7P@33958,4HCR9@91061,COG4485@1,COG4485@2 NA|NA|NA S Bacterial membrane protein YfhO HOOMBAJD_01324 568703.LGG_01706 0.0 1371.7 Lactobacillaceae pbp2b 3.4.16.4 ko:K00687,ko:K05515,ko:K12553,ko:K21465 ko00550,ko01100,ko01501,map00550,map01100,map01501 ko00000,ko00001,ko01000,ko01011 Bacteria 1TQHY@1239,3F3KH@33958,4HAFX@91061,COG0768@1,COG0768@2 NA|NA|NA M Penicillin-binding Protein HOOMBAJD_01325 568703.LGG_01705 1.1e-119 436.0 Lactobacillaceae gluP 3.4.21.105 ko:K19225 ko00000,ko01000,ko01002 Bacteria 1TQXT@1239,3F3WR@33958,4HCDF@91061,COG0705@1,COG0705@2 NA|NA|NA S Peptidase, S54 family HOOMBAJD_01326 568703.LGG_01704 1.1e-40 172.2 Lactobacillaceae yqgQ Bacteria 1VK83@1239,3F83I@33958,4HRG2@91061,COG4483@1,COG4483@2 NA|NA|NA S Bacterial protein of unknown function (DUF910) HOOMBAJD_01327 568703.LGG_01703 2e-177 628.2 Lactobacillaceae glk GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.7.1.2 ko:K00845 ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200 M00001,M00549 R00299,R01600,R01786 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 iSB619.SA_RS07790 Bacteria 1TPKW@1239,3F4F0@33958,4HBAU@91061,COG1940@1,COG1940@2 NA|NA|NA G Glucokinase HOOMBAJD_01328 568703.LGG_01702 3.7e-72 277.3 Lactobacillaceae yqhL Bacteria 1VAI7@1239,3F67E@33958,4HKCE@91061,COG0607@1,COG0607@2 NA|NA|NA P Rhodanese-like protein HOOMBAJD_01329 568703.LGG_01701 9.8e-25 118.6 Lactobacillaceae WQ51_02665 Bacteria 1VPEZ@1239,2C91M@1,33E1E@2,3F8C0@33958,4HRR2@91061 NA|NA|NA S Protein of unknown function (DUF3042) HOOMBAJD_01330 568703.LGG_01700 5.7e-180 636.7 Lactobacillaceae miaA GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 ko:K00791 ko00908,ko01100,ko01110,map00908,map01100,map01110 R01122 RC02820 ko00000,ko00001,ko01000,ko01006,ko03016 Bacteria 1TPSC@1239,3F3XS@33958,4HAVW@91061,COG0324@1,COG0324@2 NA|NA|NA F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) HOOMBAJD_01331 568703.LGG_01699 1e-240 839.0 Lactobacillaceae ynbB GO:0003674,GO:0003824,GO:0003962,GO:0004123,GO:0016740,GO:0016765,GO:0016829,GO:0016846 4.4.1.1 ko:K01758 ko00260,ko00270,ko00450,ko01100,ko01130,ko01230,map00260,map00270,map00450,map01100,map01130,map01230 M00338 R00782,R01001,R02408,R04770,R04930,R09366 RC00056,RC00069,RC00348,RC00382,RC00710,RC01209,RC01210,RC01245,RC02303 ko00000,ko00001,ko00002,ko01000,ko04147 Bacteria 1TQ88@1239,3F3PU@33958,4HAF5@91061,COG4100@1,COG4100@2 NA|NA|NA P aluminum resistance HOOMBAJD_01332 568703.LGG_01698 0.0 1370.9 Lactobacillaceae yaaO 4.1.1.17,4.1.1.19 ko:K01581,ko:K01585 ko00330,ko00480,ko01100,ko01110,ko01130,map00330,map00480,map01100,map01110,map01130 M00133,M00134 R00566,R00670 RC00299 ko00000,ko00001,ko00002,ko01000 Bacteria 1TNZ9@1239,3F3TV@33958,4HBGC@91061,COG1982@1,COG1982@2 NA|NA|NA E Orn/Lys/Arg decarboxylase, C-terminal domain HOOMBAJD_01333 568703.LGG_01697 1e-60 239.2 Lactobacillaceae glnR GO:0003674,GO:0005488,GO:0005515,GO:0006082,GO:0006355,GO:0006520,GO:0006541,GO:0006542,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0016053,GO:0019219,GO:0019222,GO:0019752,GO:0031323,GO:0031326,GO:0042802,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1903506,GO:2000112,GO:2001141 ko:K03713,ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 M00439 ko00000,ko00001,ko00002,ko02000,ko03000 3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25 Bacteria 1V6JE@1239,3F7RX@33958,4HKM6@91061,COG0789@1,COG0789@2 NA|NA|NA K Transcriptional regulator HOOMBAJD_01334 568703.LGG_01696 1.3e-262 911.8 Lactobacillaceae glnA 6.3.1.2 ko:K01915 ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727 R00253 RC00010,RC02798 ko00000,ko00001,ko01000,ko04147 Bacteria 1TNZA@1239,3F41A@33958,4HACE@91061,COG0174@1,COG0174@2 NA|NA|NA E glutamine synthetase HOOMBAJD_01335 568703.LGG_01695 0.0 1563.1 Lactobacillaceae pepX 3.4.14.11 ko:K01281 ko00000,ko01000,ko01002 Bacteria 1TT78@1239,3F44E@33958,4HBA0@91061,COG2936@1,COG2936@2 NA|NA|NA E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline HOOMBAJD_01336 568703.LGG_01694 6e-262 909.8 Lactobacillaceae ko:K06148 ko00000,ko02000 3.A.1 Bacteria 1V08F@1239,3F517@33958,4HTAU@91061,COG1132@1,COG1132@2 NA|NA|NA V ABC transporter transmembrane region HOOMBAJD_01338 568703.LGG_01693 1.4e-231 808.5 Lactobacillaceae ywhK Bacteria 1V841@1239,3F50M@33958,4HITC@91061,COG3391@1,COG3391@2 NA|NA|NA S Membrane HOOMBAJD_01339 568703.LGG_01692 4.1e-14 82.8 Lactobacillaceae Bacteria 1U87T@1239,29QJP@1,30BJ9@2,3FANH@33958,4II5H@91061 NA|NA|NA HOOMBAJD_01340 568703.LGG_01691 1.3e-32 145.2 Lactobacillaceae Bacteria 1U7X3@1239,29QDE@1,30BCP@2,3FAA2@33958,4IHUF@91061 NA|NA|NA HOOMBAJD_01341 1423732.BALS01000003_gene859 4.5e-49 200.3 Lactobacillaceae rplU GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02888 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1V9YH@1239,3F6WT@33958,4HIGK@91061,COG0261@1,COG0261@2 NA|NA|NA J This protein binds to 23S rRNA in the presence of protein L20 HOOMBAJD_01342 568703.LGG_01689 3.6e-55 220.7 Lactobacillaceae ysxB ko:K07584 ko00000 Bacteria 1VEQ9@1239,3F839@33958,4HNMV@91061,COG2868@1,COG2868@2 NA|NA|NA J Cysteine protease Prp HOOMBAJD_01343 543734.LCABL_18600 1.7e-47 194.9 Lactobacillaceae rpmA GO:0000027,GO:0001558,GO:0003674,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0030312,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0040008,GO:0042254,GO:0042255,GO:0042256,GO:0042273,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044877,GO:0048518,GO:0050789,GO:0050794,GO:0051128,GO:0065003,GO:0065007,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0090069,GO:0090070,GO:1901564,GO:1901566,GO:1901576,GO:1902626,GO:1990904 ko:K02899 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1V6HW@1239,3F6WU@33958,4HIMN@91061,COG0211@1,COG0211@2 NA|NA|NA J Belongs to the bacterial ribosomal protein bL27 family HOOMBAJD_01344 568703.LGG_01687 7e-203 713.0 Lactobacillaceae ypdF 3.4.11.9,3.4.13.9 ko:K01262,ko:K01271 ko00000,ko01000,ko01002 Bacteria 1TQ44@1239,3F4DR@33958,4HAT7@91061,COG0006@1,COG0006@2 NA|NA|NA E Creatinase/Prolidase N-terminal domain HOOMBAJD_01345 568703.LGG_01686 6.3e-102 376.7 Lactobacillaceae efp GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 ko:K02356 ko00000,ko03012 Bacteria 1TR8P@1239,3F422@33958,4H9YX@91061,COG0231@1,COG0231@2 NA|NA|NA J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase HOOMBAJD_01346 568703.LGG_01685 1.5e-72 278.9 Lactobacillaceae yqhY ko:K10947 ko00000,ko03000 Bacteria 1V4IC@1239,3F71X@33958,4HJ7T@91061,COG1302@1,COG1302@2 NA|NA|NA S Asp23 family, cell envelope-related function HOOMBAJD_01347 568703.LGG_01684 2e-66 258.5 Lactobacillaceae nusB ko:K03625 ko00000,ko03009,ko03021 Bacteria 1VA9B@1239,3F7KW@33958,4HKMU@91061,COG0781@1,COG0781@2 NA|NA|NA K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons HOOMBAJD_01348 568703.LGG_01683 1.9e-150 538.5 Lactobacillaceae folD GO:0003674,GO:0003824,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0019238,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114 1.5.1.5,3.5.4.9 ko:K01491 ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200 M00140,M00377 R01220,R01655 RC00202,RC00578 ko00000,ko00001,ko00002,ko01000 Bacteria 1TP1P@1239,3F46A@33958,4H9Q6@91061,COG0190@1,COG0190@2 NA|NA|NA F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate HOOMBAJD_01349 568703.LGG_01682 4.2e-245 853.6 Lactobacillaceae xseA 3.1.11.6 ko:K03601 ko03430,map03430 ko00000,ko00001,ko01000,ko03400 Bacteria 1TP4E@1239,3F4RE@33958,4HAN2@91061,COG1570@1,COG1570@2 NA|NA|NA L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides HOOMBAJD_01350 568703.LGG_01681 1.6e-32 144.8 Lactobacillaceae xseB 3.1.11.6 ko:K03602 ko03430,map03430 ko00000,ko00001,ko01000,ko03400 Bacteria 1VK9I@1239,3F81K@33958,4HNRB@91061,COG1722@1,COG1722@2 NA|NA|NA L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides HOOMBAJD_01351 568703.LGG_01680 6.3e-146 523.5 Lactobacillaceae ispA GO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044464,GO:0071704,GO:1901576 2.5.1.1,2.5.1.10,2.5.1.29,2.5.1.90 ko:K00795,ko:K02523,ko:K13789 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 M00364,M00366 R01658,R02003,R02061,R09248 RC00279 ko00000,ko00001,ko00002,ko01000,ko01006 Bacteria 1TPQY@1239,3F436@33958,4HA8E@91061,COG0142@1,COG0142@2 NA|NA|NA H Belongs to the FPP GGPP synthase family HOOMBAJD_01352 568703.LGG_01679 5.2e-153 547.0 Lactobacillaceae rrmJ 2.1.1.226,2.1.1.227 ko:K06442 ko00000,ko01000,ko03009 Bacteria 1TPE4@1239,3F45T@33958,4HAPY@91061,COG1189@1,COG1189@2 NA|NA|NA J Ribosomal RNA large subunit methyltransferase J HOOMBAJD_01353 568703.LGG_01678 2e-74 285.0 Lactobacillaceae argR GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0006355,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0019219,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032991,GO:0032993,GO:0043565,GO:0044212,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:2000112,GO:2001141 ko:K03402 ko00000,ko03000 Bacteria 1V1R7@1239,3F71C@33958,4HFY8@91061,COG1438@1,COG1438@2 NA|NA|NA K Regulates arginine biosynthesis genes HOOMBAJD_01354 568703.LGG_01677 5.7e-308 1062.8 Lactobacillaceae recN GO:0000724,GO:0000725,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0008152,GO:0009295,GO:0009314,GO:0009432,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0030312,GO:0031668,GO:0033554,GO:0034641,GO:0042802,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043590,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071496,GO:0071704,GO:0071944,GO:0090304,GO:1901360 ko:K03631,ko:K13582 ko04112,map04112 ko00000,ko00001,ko03400 Bacteria 1TP99@1239,3F43U@33958,4H9ZR@91061,COG0497@1,COG0497@2 NA|NA|NA L May be involved in recombinational repair of damaged DNA HOOMBAJD_01355 568703.LGG_01676 3e-50 204.1 Lactobacillaceae Bacteria 1U763@1239,29PXH@1,30AVW@2,3F90Y@33958,4IH0V@91061 NA|NA|NA HOOMBAJD_01356 568703.LGG_01675 1.5e-121 442.2 Lactobacillaceae rssA GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016787,GO:0044424,GO:0044444,GO:0044464 ko:K07001 ko00000 Bacteria 1UXU0@1239,3F92T@33958,4IBIE@91061,COG1752@1,COG1752@2 NA|NA|NA S Patatin-like phospholipase HOOMBAJD_01357 568703.LGG_01674 3.2e-115 421.0 Lactobacillaceae gmk GO:0003674,GO:0003824,GO:0004385,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009150,GO:0009161,GO:0009165,GO:0009167,GO:0009179,GO:0009185,GO:0009259,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042278,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046483,GO:0046710,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.4.8 ko:K00942 ko00230,ko01100,map00230,map01100 M00050 R00332,R02090 RC00002 ko00000,ko00001,ko00002,ko01000 iYO844.BSU15680 Bacteria 1TP0M@1239,3F3X9@33958,4HAYW@91061,COG0194@1,COG0194@2 NA|NA|NA F Essential for recycling GMP and indirectly, cGMP HOOMBAJD_01358 568703.LGG_01673 2.9e-35 154.1 Lactobacillaceae rpoZ GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0030312,GO:0030880,GO:0032774,GO:0032991,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0040007,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0061695,GO:0071704,GO:0071944,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234 2.7.7.6 ko:K03060 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 M00183 R00435,R00441,R00442,R00443 RC02795 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 Bacteria 1VK74@1239,3F81N@33958,4HNHS@91061,COG1758@1,COG1758@2 NA|NA|NA K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits HOOMBAJD_01359 568703.LGG_01672 1.8e-215 755.0 Lactobacillaceae coaBC 4.1.1.36,6.3.2.5 ko:K01598,ko:K13038 ko00770,ko01100,map00770,map01100 M00120 R03269,R04231 RC00064,RC00090,RC00822 ko00000,ko00001,ko00002,ko01000 Bacteria 1TPP3@1239,3F3XX@33958,4HAK8@91061,COG0452@1,COG0452@2 NA|NA|NA H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine HOOMBAJD_01360 568703.LGG_01671 0.0 1583.5 Lactobacillaceae priA GO:0003674,GO:0003678,GO:0003824,GO:0004003,GO:0004386,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006268,GO:0006270,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032392,GO:0032508,GO:0033554,GO:0034641,GO:0034645,GO:0042623,GO:0043138,GO:0043140,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0046483,GO:0050896,GO:0051276,GO:0051716,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360,GO:1901576 ko:K04066 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Bacteria 1TNYB@1239,3F3N8@33958,4H9WW@91061,COG1198@1,COG1198@2 NA|NA|NA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA HOOMBAJD_01361 568703.LGG_01670 6.5e-176 623.2 Lactobacillaceae fmt GO:0003674,GO:0003824,GO:0004479,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006464,GO:0006518,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043043,GO:0043170,GO:0043412,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.1.2.9 ko:K00604 ko00670,ko00970,map00670,map00970 R03940 RC00026,RC00165 ko00000,ko00001,ko01000 iSB619.SA_RS06010 Bacteria 1TQ32@1239,3F4N7@33958,4HART@91061,COG0223@1,COG0223@2 NA|NA|NA J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus HOOMBAJD_01362 568703.LGG_01669 3.3e-250 870.5 Lactobacillaceae sun GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008173,GO:0008649,GO:0008757,GO:0009383,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0030312,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.176 ko:K03500 ko00000,ko01000,ko03009 Bacteria 1TP3N@1239,3F45F@33958,4HBQ6@91061,COG0144@1,COG0144@2,COG0781@1,COG0781@2 NA|NA|NA J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA HOOMBAJD_01363 568703.LGG_01668 2e-135 488.4 Lactobacillaceae stp 3.1.3.16 ko:K20074 ko00000,ko01000,ko01009 Bacteria 1V6K5@1239,3F4UI@33958,4HCDR@91061,COG0631@1,COG0631@2 NA|NA|NA T phosphatase HOOMBAJD_01364 568703.LGG_01667 0.0 1112.1 Lactobacillaceae Bacteria 1TP3F@1239,3F4G6@33958,4H9KD@91061,COG0515@1,COG0515@2 NA|NA|NA KLT serine threonine protein kinase HOOMBAJD_01365 568703.LGG_01666 9e-167 592.8 Lactobacillaceae rsgA 3.1.3.100 ko:K06949 ko00730,ko01100,map00730,map01100 R00615,R02135 RC00002,RC00017 ko00000,ko00001,ko01000,ko03009 Bacteria 1TPSQ@1239,3F3XH@33958,4HA9W@91061,COG1162@1,COG1162@2 NA|NA|NA S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit HOOMBAJD_01366 568703.LGG_01665 1.5e-115 422.2 Lactobacillaceae rpe 5.1.3.1 ko:K01783,ko:K17195 ko00030,ko00040,ko00051,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00051,map00710,map01100,map01110,map01120,map01130,map01200,map01230 M00004,M00007 R01529,R09031 RC00540,RC03111 ko00000,ko00001,ko00002,ko01000 Bacteria 1TQK8@1239,3F4KX@33958,4H9RW@91061,COG0036@1,COG0036@2 NA|NA|NA G Belongs to the ribulose-phosphate 3-epimerase family HOOMBAJD_01367 568703.LGG_01664 1.4e-124 452.2 Lactobacillaceae thiN 2.7.6.2 ko:K00949 ko00730,ko01100,map00730,map01100 R00619 RC00002,RC00017 ko00000,ko00001,ko01000 Bacteria 1VA0W@1239,3F4N8@33958,4HHS1@91061,COG1564@1,COG1564@2 NA|NA|NA H thiamine pyrophosphokinase HOOMBAJD_01368 568703.LGG_01663 2.4e-26 124.0 Lactobacillaceae rpmB GO:0003674,GO:0003735,GO:0005198 ko:K02902 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1VEI2@1239,3F7ZN@33958,4HNIK@91061,COG0227@1,COG0227@2 NA|NA|NA J Belongs to the bacterial ribosomal protein bL28 family HOOMBAJD_01369 568703.LGG_01662 2.3e-57 228.0 Lactobacillaceae asp Bacteria 1V731@1239,3F72W@33958,4HIS4@91061,COG1302@1,COG1302@2 NA|NA|NA S Asp23 family, cell envelope-related function HOOMBAJD_01370 568703.LGG_01661 3.9e-285 986.9 Lactobacillaceae yloV ko:K07030 ko00000 Bacteria 1TQMX@1239,3F3X0@33958,4HBSE@91061,COG1461@1,COG1461@2 NA|NA|NA S DAK2 domain fusion protein YloV HOOMBAJD_01371 568703.LGG_01660 0.0 1327.8 Lactobacillaceae recG GO:0003674,GO:0003678,GO:0003724,GO:0003824,GO:0004003,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006725,GO:0006807,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0008186,GO:0009314,GO:0009379,GO:0009628,GO:0009987,GO:0010501,GO:0016020,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032392,GO:0032508,GO:0032991,GO:0033202,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048476,GO:0050896,GO:0051276,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0140097,GO:0140098,GO:1901360,GO:1902494 3.6.4.12 ko:K03655 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Bacteria 1TQ6I@1239,3F3JW@33958,4HAWN@91061,COG1200@1,COG1200@2 NA|NA|NA L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) HOOMBAJD_01372 568703.LGG_01659 1e-187 662.5 Lactobacillaceae plsX GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.3.1.15 ko:K03621 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 M00089 R00851,R09380 RC00004,RC00039,RC00041 ko00000,ko00001,ko00002,ko01000,ko01004 Bacteria 1TPXS@1239,3F4N9@33958,4HA0R@91061,COG0416@1,COG0416@2 NA|NA|NA I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA HOOMBAJD_01373 568703.LGG_01658 8.9e-37 159.1 Lactobacillaceae acpP GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 ko:K02078 ko00000,ko00001 Bacteria 1VEE3@1239,3F7F4@33958,4HNQ0@91061,COG0236@1,COG0236@2 NA|NA|NA IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis HOOMBAJD_01374 568703.LGG_01656 4.4e-194 683.7 Lactobacillaceae oppD GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K02031,ko:K02032,ko:K15583 ko01501,ko02010,ko02024,map01501,map02010,map02024 M00239,M00439 ko00000,ko00001,ko00002,ko02000 3.A.1.5,3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25 Bacteria 1TP6E@1239,3F41T@33958,4HA4E@91061,COG0444@1,COG0444@2 NA|NA|NA P Belongs to the ABC transporter superfamily HOOMBAJD_01375 568703.LGG_01655 1.4e-178 632.1 Lactobacillaceae oppF GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K02032,ko:K10823,ko:K12372,ko:K13892 ko01501,ko02010,ko02024,map01501,map02010,map02024 M00239,M00324,M00348,M00439 ko00000,ko00001,ko00002,ko02000 3.A.1.5,3.A.1.5.1,3.A.1.5.11,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25 Bacteria 1V36J@1239,3F4GM@33958,4H9YB@91061,COG4608@1,COG4608@2 NA|NA|NA P Belongs to the ABC transporter superfamily HOOMBAJD_01376 568703.LGG_01654 2.8e-174 617.8 Lactobacillaceae oppB ko:K02033,ko:K02034,ko:K13894 ko02010,ko02024,map02010,map02024 M00239,M00349 ko00000,ko00001,ko00002,ko02000 3.A.1.5,3.A.1.5.21,3.A.1.5.24 Bacteria 1TP1S@1239,3FCCU@33958,4HATR@91061,COG0601@1,COG0601@2 NA|NA|NA P ABC transporter permease HOOMBAJD_01377 568703.LGG_01653 8.2e-136 490.0 Lactobacillaceae oppC ko:K02034,ko:K15582 ko01501,ko02010,ko02024,map01501,map02010,map02024 M00239,M00439 ko00000,ko00001,ko00002,ko02000 3.A.1.5,3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25 Bacteria 1TP4R@1239,3FCB6@33958,4HA7I@91061,COG1173@1,COG1173@2 NA|NA|NA EP Binding-protein-dependent transport system inner membrane component HOOMBAJD_01378 568703.LGG_01652 0.0 1152.5 Lactobacillaceae oppA1 ko:K02035 ko02024,map02024 M00239 ko00000,ko00001,ko00002,ko02000 3.A.1.5 Bacteria 1TQ0N@1239,3F3KW@33958,4HARF@91061,COG0747@1,COG0747@2 NA|NA|NA E ABC transporter substrate-binding protein HOOMBAJD_01379 568703.LGG_01651 1.9e-124 451.8 Lactobacillaceae rnc GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 ko:K03685 ko03008,ko05205,map03008,map05205 ko00000,ko00001,ko01000,ko03009,ko03019,ko03036 Bacteria 1TPGC@1239,3F564@33958,4HAWU@91061,COG0571@1,COG0571@2 NA|NA|NA J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism HOOMBAJD_01380 568703.LGG_01650 0.0 1620.5 Lactobacillaceae smc ko:K03529 ko00000,ko03036 Bacteria 1TPJV@1239,3F478@33958,4HB89@91061,COG1196@1,COG1196@2 NA|NA|NA D Required for chromosome condensation and partitioning HOOMBAJD_01381 568703.LGG_01649 9.8e-183 646.0 Lactobacillaceae ftsY ko:K03110 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 ko00000,ko00001,ko00002,ko02044 3.A.5.1,3.A.5.2,3.A.5.7 Bacteria 1TPRI@1239,3F3YC@33958,4HA6A@91061,COG0552@1,COG0552@2 NA|NA|NA U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) HOOMBAJD_01382 568703.LGG_01648 3.3e-52 210.7 Lactobacillaceae Bacteria 1VPSM@1239,2EU16@1,33MI8@2,3F6QA@33958,4HS7T@91061 NA|NA|NA HOOMBAJD_01383 568703.LGG_01647 1.2e-23 115.2 Lactobacillaceae Bacteria 1U8B4@1239,29QMI@1,30BM6@2,3FASJ@33958,4II94@91061 NA|NA|NA HOOMBAJD_01384 568703.LGG_01645 3.7e-57 227.3 Lactobacillaceae ylxM GO:0003674,GO:0008150,GO:0030234,GO:0030695,GO:0050790,GO:0060589,GO:0065007,GO:0065009,GO:0098772 ko:K09787 ko00000 Bacteria 1VEGP@1239,3F7FG@33958,4HKK6@91061,COG2739@1,COG2739@2 NA|NA|NA S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein HOOMBAJD_01385 568703.LGG_01644 1.2e-229 802.4 Lactobacillaceae ffh GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0030312,GO:0040007,GO:0044464,GO:0071944 3.6.5.4 ko:K03106 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 ko00000,ko00001,ko00002,ko01000,ko02044 3.A.5.1,3.A.5.2,3.A.5.7,3.A.5.8,3.A.5.9 Bacteria 1TP06@1239,3F40R@33958,4H9T4@91061,COG0541@1,COG0541@2 NA|NA|NA U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY HOOMBAJD_01386 543734.LCABL_18150 1e-44 185.7 Lactobacillaceae rpsP GO:0000028,GO:0000217,GO:0000400,GO:0003674,GO:0003676,GO:0003677,GO:0003735,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006259,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0016787,GO:0016788,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02959 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011,ko03029 Bacteria 1VA0X@1239,3F6VV@33958,4HKNN@91061,COG0228@1,COG0228@2 NA|NA|NA J Belongs to the bacterial ribosomal protein bS16 family HOOMBAJD_01387 568703.LGG_01642 1.4e-37 161.8 Lactobacillaceae ylqC ko:K06960 ko00000 Bacteria 1VEG7@1239,3F829@33958,4HNX0@91061,COG1837@1,COG1837@2 NA|NA|NA S Belongs to the UPF0109 family HOOMBAJD_01388 568703.LGG_01641 7.6e-94 349.7 Lactobacillaceae rimM GO:0000028,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016072,GO:0022607,GO:0022613,GO:0022618,GO:0030490,GO:0034470,GO:0034622,GO:0034641,GO:0034660,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:1901360 ko:K02860 ko00000,ko03009 Bacteria 1V6HD@1239,3F74P@33958,4HH3H@91061,COG0806@1,COG0806@2 NA|NA|NA J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes HOOMBAJD_01389 568703.LGG_01640 8.1e-148 529.6 Lactobacillaceae trmD GO:0000287,GO:0001510,GO:0002939,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0040007,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0050518,GO:0052906,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228,4.6.1.12 ko:K00554,ko:K01770 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 M00096 R00597,R05637 RC00002,RC00003,RC00334,RC01440 ko00000,ko00001,ko00002,ko01000,ko03016 Bacteria 1TPBV@1239,3F3NP@33958,4HBFV@91061,COG0336@1,COG0336@2 NA|NA|NA J Belongs to the RNA methyltransferase TrmD family HOOMBAJD_01390 568703.LGG_01639 6.5e-57 226.5 Lactobacillaceae rplS GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070180,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02884 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1V6FT@1239,3F6K4@33958,4HIK3@91061,COG0335@1,COG0335@2 NA|NA|NA J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site HOOMBAJD_01391 568703.LGG_01638 1.1e-25 121.7 Lactobacillaceae Bacteria 1U7XM@1239,29QDP@1,30BCZ@2,3FAAR@33958,4IHV0@91061 NA|NA|NA HOOMBAJD_01392 568703.LGG_01637 1.1e-37 162.2 Lactobacillaceae ynzC Bacteria 1VEKJ@1239,3F87S@33958,4HNIB@91061,COG4224@1,COG4224@2 NA|NA|NA S UPF0291 protein HOOMBAJD_01393 568703.LGG_01636 4.8e-29 133.3 Lactobacillaceae yneF ko:K09976 ko00000 Bacteria 1VEJC@1239,3FCDQ@33958,4HNN9@91061,COG3763@1,COG3763@2 NA|NA|NA S UPF0154 protein HOOMBAJD_01394 568703.LGG_01635 0.0 1128.6 Lactobacillaceae mdlA GO:0000166,GO:0003674,GO:0005488,GO:0005524,GO:0005575,GO:0005623,GO:0005886,GO:0008144,GO:0016020,GO:0016021,GO:0017076,GO:0030554,GO:0031224,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044425,GO:0044464,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363 ko:K06148,ko:K18889 ko02010,map02010 M00707 ko00000,ko00001,ko00002,ko02000 3.A.1,3.A.1.106.13,3.A.1.106.5 Bacteria 1TP0B@1239,3F3PD@33958,4HA3S@91061,COG1132@1,COG1132@2 NA|NA|NA V ABC transporter HOOMBAJD_01395 568703.LGG_01634 0.0 1141.7 Lactobacillaceae mdlB GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005319,GO:0005488,GO:0005524,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006869,GO:0008144,GO:0008150,GO:0010876,GO:0015399,GO:0015405,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0030554,GO:0031224,GO:0032553,GO:0032555,GO:0032559,GO:0033036,GO:0034040,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0043167,GO:0043168,GO:0043492,GO:0044425,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363 ko:K06147,ko:K18890 ko02010,map02010 M00707 ko00000,ko00001,ko00002,ko02000 3.A.1.106,3.A.1.106.13,3.A.1.106.5,3.A.1.109,3.A.1.21 Bacteria 1TP0B@1239,3F3PD@33958,4HA3S@91061,COG1132@1,COG1132@2 NA|NA|NA V ABC transporter HOOMBAJD_01396 568703.LGG_01633 2.6e-138 498.0 Lactobacillaceae yejC Bacteria 1V46X@1239,3F4FJ@33958,4HI49@91061,COG4420@1,COG4420@2 NA|NA|NA S Protein of unknown function (DUF1003) HOOMBAJD_01397 568703.LGG_01632 7.2e-200 703.4 Lactobacillaceae bcaP ko:K03294 ko00000 2.A.3.2 Bacteria 1TQ4K@1239,3F3QY@33958,4HA66@91061,COG0531@1,COG0531@2 NA|NA|NA E Amino Acid HOOMBAJD_01398 568703.LGG_01631 2.2e-122 444.9 Lactobacillaceae plsC GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0008374,GO:0016020,GO:0016411,GO:0016740,GO:0016746,GO:0016747,GO:0042171,GO:0044464,GO:0071617,GO:0071944 2.3.1.51 ko:K00655 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 M00089 R02241,R09381 RC00004,RC00037,RC00039 ko00000,ko00001,ko00002,ko01000,ko01004 Bacteria 1U8N2@1239,3F4QB@33958,4HDQR@91061,COG0204@1,COG0204@2 NA|NA|NA I Acyltransferase HOOMBAJD_01399 568703.LGG_01630 1.4e-133 482.3 Lactobacillaceae yabB GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016740,GO:0016741,GO:0032259,GO:0044424,GO:0044444,GO:0044464 2.1.1.223 ko:K07461,ko:K15460 ko00000,ko01000,ko03016 Bacteria 1TQ25@1239,3F4C5@33958,4HA8W@91061,COG4123@1,COG4123@2 NA|NA|NA L Methyltransferase small domain HOOMBAJD_01400 568703.LGG_00812 4.3e-64 250.4 Lactobacillaceae yugI 5.3.1.9 ko:K01810,ko:K02945,ko:K07570,ko:K07571,ko:K19142 ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,ko03010,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200,map03010 M00001,M00004,M00114,M00178 R02739,R02740,R03321 RC00376,RC00563 br01610,ko00000,ko00001,ko00002,ko01000,ko02048,ko03011,ko04147 Bacteria 1VASQ@1239,3F6AN@33958,4HKSW@91061,COG1098@1,COG1098@2 NA|NA|NA J general stress protein HOOMBAJD_01401 568703.LGG_00811 3.8e-110 404.1 Lactobacillaceae ppiB GO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:0140096,GO:1901564 5.2.1.8 ko:K01802,ko:K03768 ko00000,ko01000,ko03110 Bacteria 1TRHW@1239,3F3TI@33958,4H9V0@91061,COG0652@1,COG0652@2 NA|NA|NA G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides HOOMBAJD_01402 568703.LGG_00810 6.7e-184 649.8 Lactobacillaceae trxB1 1.18.1.2,1.19.1.1 ko:K21567 ko00000,ko01000 Bacteria 1TRPN@1239,3F3NQ@33958,4H9V7@91061,COG0492@1,COG0492@2 NA|NA|NA C Ferredoxin--NADP reductase HOOMBAJD_01403 568703.LGG_00809 1.5e-86 325.5 Lactobacillaceae pgpA 3.1.3.27 ko:K01095 ko00564,ko01100,map00564,map01100 R02029 RC00017 ko00000,ko00001,ko01000 Bacteria 1V3I0@1239,3F6QT@33958,4HH4Y@91061,COG1267@1,COG1267@2 NA|NA|NA I Phosphatidylglycerophosphatase A HOOMBAJD_01404 568703.LGG_00808 8.9e-116 422.9 Lactobacillaceae dedA ko:K03975 ko00000 Bacteria 1UZ4P@1239,3F4KG@33958,4HG3F@91061,COG0586@1,COG0586@2 NA|NA|NA S SNARE-like domain protein HOOMBAJD_01405 568703.LGG_00807 6.1e-114 416.8 Lactobacillaceae Bacteria 1V7UW@1239,3F4YP@33958,4HHH4@91061,COG4478@1,COG4478@2 NA|NA|NA S Protein of unknown function (DUF1461) HOOMBAJD_01406 568703.LGG_00806 9.1e-144 516.2 Lactobacillaceae nagD 2.7.1.25,3.1.3.41 ko:K00860,ko:K01101 ko00230,ko00627,ko00920,ko01100,ko01120,map00230,map00627,map00920,map01100,map01120 M00176 R00509,R03024,R04928 RC00002,RC00078,RC00151 ko00000,ko00001,ko00002,ko01000 Bacteria 1TQGM@1239,3F49D@33958,4HA3R@91061,COG0647@1,COG0647@2 NA|NA|NA G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro HOOMBAJD_01407 568703.LGG_00805 4.7e-111 407.1 Lactobacillaceae yutD Bacteria 1VA85@1239,3F66P@33958,4HKF7@91061,COG4470@1,COG4470@2 NA|NA|NA S Protein of unknown function (DUF1027) HOOMBAJD_01408 568703.LGG_00804 5.7e-266 922.9 Lactobacillaceae yunD 3.1.3.5 ko:K01081 ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110 R00183,R00511,R00963,R01126,R01227,R01569,R01664,R01968,R02088,R02102,R02323,R02719,R03346 RC00017 ko00000,ko00001,ko01000 Bacteria 1TQCW@1239,3F4ZD@33958,4HAUC@91061,COG0737@1,COG0737@2 NA|NA|NA F Belongs to the 5'-nucleotidase family HOOMBAJD_01409 568703.LGG_00803 1.8e-115 421.8 Lactobacillaceae Bacteria 1V40Y@1239,3F4EX@33958,4HH4J@91061,COG4186@1,COG4186@2 NA|NA|NA S Calcineurin-like phosphoesterase HOOMBAJD_01410 568703.LGG_00802 1.3e-115 422.5 Lactobacillaceae yibF Bacteria 1TSWX@1239,3F3S6@33958,4HBKX@91061,COG5438@1,COG5438@2 NA|NA|NA S overlaps another CDS with the same product name HOOMBAJD_01411 568703.LGG_00801 2.9e-188 664.5 Lactobacillaceae yibE Bacteria 1TPEV@1239,3F3M9@33958,4HCP3@91061,COG5438@1,COG5438@2 NA|NA|NA S overlaps another CDS with the same product name HOOMBAJD_01412 568703.LGG_00800 2.1e-54 218.0 Lactobacillaceae Bacteria 1VX4A@1239,2C26E@1,3424N@2,3F70Q@33958,4HXT9@91061 NA|NA|NA HOOMBAJD_01413 568703.LGG_00799 1.2e-255 888.6 Lactobacillaceae ugpQ 3.1.4.46 ko:K01126 ko00564,map00564 R01030,R01470 RC00017,RC00425 ko00000,ko00001,ko01000 Bacteria 1UGF1@1239,3FC1S@33958,4H9QE@91061,COG0584@1,COG0584@2 NA|NA|NA C Glycerophosphoryl diester phosphodiesterase family HOOMBAJD_01414 568703.LGG_00798 1.2e-271 941.8 Lactobacillaceae pepV 3.5.1.18 ko:K01270,ko:K01439 ko00300,ko00480,ko01100,ko01120,ko01230,map00300,map00480,map01100,map01120,map01230 M00016 R00899,R02734,R04951 RC00064,RC00090,RC00096,RC00141 ko00000,ko00001,ko00002,ko01000,ko01002 Bacteria 1TPEG@1239,3F3UV@33958,4HC14@91061,COG0624@1,COG0624@2 NA|NA|NA E dipeptidase PepV HOOMBAJD_01415 568703.LGG_00797 1.7e-134 485.3 Lactobacillaceae birA 6.3.4.15 ko:K03524 ko00780,ko01100,map00780,map01100 R01074,R05145 RC00043,RC00070,RC00096,RC02896 ko00000,ko00001,ko01000,ko03000 Bacteria 1TQCU@1239,3F5HY@33958,4HB60@91061,COG0340@1,COG0340@2 NA|NA|NA H Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor HOOMBAJD_01416 568703.LGG_00796 8.1e-128 463.0 Lactobacillaceae yjjG GO:0003674,GO:0003824,GO:0005488,GO:0006139,GO:0006206,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008252,GO:0008253,GO:0008655,GO:0009058,GO:0009112,GO:0009410,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0018130,GO:0019438,GO:0019856,GO:0019859,GO:0030145,GO:0034641,GO:0034654,GO:0042221,GO:0042578,GO:0043094,GO:0043100,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046112,GO:0046483,GO:0046872,GO:0046914,GO:0050896,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 3.1.3.102,3.1.3.104,3.1.3.5,3.8.1.2 ko:K01560,ko:K07025,ko:K08723,ko:K20862 ko00230,ko00240,ko00361,ko00625,ko00740,ko00760,ko01100,ko01110,ko01120,map00230,map00240,map00361,map00625,map00740,map00760,map01100,map01110,map01120 M00125 R00183,R00511,R00548,R00963,R01126,R01227,R01569,R01664,R01968,R02088,R02102,R02323,R02719,R03346,R05287,R07280 RC00017,RC00697 ko00000,ko00001,ko00002,ko01000 iECNA114_1301.ECNA114_4614 Bacteria 1TRQ6@1239,3FBG9@33958,4HKAS@91061,COG1011@1,COG1011@2 NA|NA|NA S HAD-hyrolase-like HOOMBAJD_01417 568703.LGG_00794 0.0 1620.9 Lactobacillaceae pbp1B 2.4.1.129,3.4.16.4 ko:K03693,ko:K05365,ko:K05366,ko:K05367,ko:K12551,ko:K12555,ko:K21464 ko00550,ko01100,ko01501,map00550,map01100,map01501 R04519 RC00005,RC00049 ko00000,ko00001,ko01000,ko01003,ko01011 GT51 Bacteria 1TPM5@1239,3F4ZE@33958,4H9SA@91061,COG0744@1,COG0744@2 NA|NA|NA M Penicillin binding protein transpeptidase domain HOOMBAJD_01418 568703.LGG_00793 2.3e-179 634.8 Lactobacillaceae ccpA GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0032991,GO:0032993,GO:0043565,GO:0044212,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1990837,GO:2000112,GO:2000113,GO:2001141 ko:K02529 ko00000,ko03000 Bacteria 1TQ7K@1239,3F4AA@33958,4H9NG@91061,COG1609@1,COG1609@2 NA|NA|NA K catabolite control protein A HOOMBAJD_01419 568703.LGG_00792 2.8e-215 754.2 Lactobacillaceae pepQ 3.4.13.9 ko:K01271 ko00000,ko01000,ko01002 Bacteria 1TQ6R@1239,3F3X5@33958,4HA5I@91061,COG0006@1,COG0006@2 NA|NA|NA E Creatinase/Prolidase N-terminal domain HOOMBAJD_01420 568703.LGG_00791 5e-93 347.1 Lactobacillaceae niaR ko:K07105 ko00000 Bacteria 1V6EY@1239,3F7V1@33958,4HGYB@91061,COG1827@1,COG1827@2 NA|NA|NA S 3H domain HOOMBAJD_01421 568703.LGG_00790 1.9e-78 298.5 Lactobacillaceae ytxH Bacteria 1VFY7@1239,3F8GC@33958,4HNWV@91061,COG4980@1,COG4980@2 NA|NA|NA S YtxH-like protein HOOMBAJD_01424 568703.LGG_00787 1.8e-156 558.5 Lactobacillaceae ykuT GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0006810,GO:0006950,GO:0006970,GO:0008150,GO:0008381,GO:0009628,GO:0009987,GO:0015267,GO:0022803,GO:0022836,GO:0022857,GO:0033554,GO:0042802,GO:0050896,GO:0051179,GO:0051234,GO:0051716,GO:0055085,GO:0071214,GO:0071470,GO:0104004 ko:K22044 ko00000,ko02000 1.A.23.3 Bacteria 1TR9Z@1239,3F49U@33958,4HCB8@91061,COG0668@1,COG0668@2 NA|NA|NA M mechanosensitive ion channel HOOMBAJD_01425 568703.LGG_00786 1.9e-156 558.5 Lactobacillaceae XK27_00890 ko:K08974 ko00000 Bacteria 1UYD5@1239,3F4QH@33958,4HBE3@91061,COG2035@1,COG2035@2 NA|NA|NA S Domain of unknown function (DUF368) HOOMBAJD_01426 568703.LGG_00785 3e-84 317.8 Lactobacillaceae ykuL Bacteria 1VFAB@1239,3FBMW@33958,4HRWJ@91061,COG0517@1,COG0517@2 NA|NA|NA S CBS domain HOOMBAJD_01427 568703.LGG_00784 5.2e-133 480.3 Lactobacillaceae gla ko:K02440 ko00000,ko02000 1.A.8.1,1.A.8.2 Bacteria 1TP4T@1239,3FCCB@33958,4HE39@91061,COG0580@1,COG0580@2 NA|NA|NA U Major intrinsic protein HOOMBAJD_01428 568703.LGG_00783 4.1e-95 354.0 Lactobacillaceae ko:K07095 ko00000 Bacteria 1VA0U@1239,3F73R@33958,4HM24@91061,COG0622@1,COG0622@2 NA|NA|NA S Phosphoesterase HOOMBAJD_01429 568703.LGG_00782 2.2e-276 957.6 Lactobacillaceae murI GO:0000270,GO:0003674,GO:0003824,GO:0004857,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006022,GO:0006023,GO:0006024,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008657,GO:0008881,GO:0009056,GO:0009058,GO:0009059,GO:0009141,GO:0009143,GO:0009252,GO:0009273,GO:0009987,GO:0010911,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016854,GO:0016855,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0030203,GO:0030234,GO:0032780,GO:0034404,GO:0034641,GO:0034645,GO:0034654,GO:0034655,GO:0036361,GO:0042030,GO:0042546,GO:0042802,GO:0043086,GO:0043170,GO:0043462,GO:0044036,GO:0044038,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0047661,GO:0050790,GO:0051336,GO:0051346,GO:0055086,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0071944,GO:0072586,GO:0098772,GO:1901135,GO:1901137,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:2000371,GO:2000372 3.6.1.66,5.1.1.3 ko:K01776,ko:K02428 ko00230,ko00471,ko01100,map00230,map00471,map01100 R00260,R00426,R00720,R01855,R02100,R02720,R03531 RC00002,RC00302 ko00000,ko00001,ko01000,ko01011 iYO844.BSU28390 Bacteria 1TPPR@1239,3F446@33958,4HA46@91061,COG0127@1,COG0127@2,COG0796@1,COG0796@2 NA|NA|NA M Provides the (R)-glutamate required for cell wall biosynthesis HOOMBAJD_01430 568703.LGG_00781 3.3e-83 314.3 Lactobacillaceae yslB Bacteria 1VD7N@1239,3F7ZI@33958,4HKV3@91061,COG1719@1,COG1719@2 NA|NA|NA S Protein of unknown function (DUF2507) HOOMBAJD_01431 568703.LGG_00780 2.7e-246 857.4 Lactobacillaceae dltD ko:K03740 ko01503,ko02020,ko05150,map01503,map02020,map05150 M00725 ko00000,ko00001,ko00002,ko01504 Bacteria 1TSZU@1239,3F3WE@33958,4HC3H@91061,COG3966@1,COG3966@2 NA|NA|NA M Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) HOOMBAJD_01432 568703.LGG_00779 4e-37 160.2 Lactobacillaceae dltC GO:0000270,GO:0003674,GO:0005215,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0006810,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0022857,GO:0030203,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0051179,GO:0051234,GO:0055085,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 6.1.1.13 ko:K02078,ko:K14188 ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150 M00725 R02718 RC00037,RC00094 ko00000,ko00001,ko00002,ko01000,ko01504 Bacteria 1VFQI@1239,3F7Q1@33958,4HNIH@91061,COG0236@1,COG0236@2 NA|NA|NA J Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall HOOMBAJD_01433 568703.LGG_00778 1.8e-239 834.7 Lactobacillaceae dltB ko:K03739 ko01503,ko02020,ko05150,map01503,map02020,map05150 M00725 ko00000,ko00001,ko00002,ko01504 Bacteria 1TP52@1239,3F4KK@33958,4HBQG@91061,COG1696@1,COG1696@2 NA|NA|NA M MBOAT, membrane-bound O-acyltransferase family HOOMBAJD_01434 568703.LGG_00777 1.4e-294 1018.1 Lactobacillaceae dltA GO:0000166,GO:0000270,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0006810,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016208,GO:0016874,GO:0016879,GO:0016881,GO:0017076,GO:0022857,GO:0030203,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034645,GO:0036094,GO:0042546,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0051179,GO:0051234,GO:0055085,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.13 ko:K03367 ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150 M00725 R02718 RC00037,RC00094 ko00000,ko00001,ko00002,ko01000,ko01504 Bacteria 1TPTH@1239,3F49R@33958,4HAHU@91061,COG1020@1,COG1020@2 NA|NA|NA H Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall HOOMBAJD_01435 568703.LGG_00775 6.6e-53 213.0 Lactobacillaceae trxA GO:0003674,GO:0003824,GO:0004791,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0015035,GO:0015036,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0016671,GO:0019725,GO:0033554,GO:0034599,GO:0042221,GO:0042592,GO:0044424,GO:0044444,GO:0044464,GO:0045454,GO:0047134,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748 ko:K03671 ko04621,ko05418,map04621,map05418 ko00000,ko00001,ko03110 Bacteria 1VA3Y@1239,3F6Y3@33958,4HKKX@91061,COG3118@1,COG3118@2 NA|NA|NA O Belongs to the thioredoxin family HOOMBAJD_01436 568703.LGG_00774 0.0 1504.2 Lactobacillaceae mutS2 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 ko:K07456 ko03430,map03430 ko00000,ko00001,ko03400 Bacteria 1TP5W@1239,3F4DX@33958,4H9NZ@91061,COG1193@1,COG1193@2 NA|NA|NA L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity HOOMBAJD_01437 568703.LGG_00773 2.5e-92 344.7 Lactobacillaceae cvpA GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008152,GO:0009058,GO:0009403,GO:0009404,GO:0009987,GO:0016020,GO:0019748,GO:0044237,GO:0044249,GO:0044464,GO:0044550,GO:0071944 ko:K03558 ko00000 Bacteria 1V7U0@1239,3F6FV@33958,4HIUU@91061,COG1286@1,COG1286@2 NA|NA|NA S Colicin V production protein HOOMBAJD_01438 568703.LGG_00772 2e-36 157.9 Lactobacillaceae zapA GO:0000003,GO:0000278,GO:0000281,GO:0000910,GO:0000917,GO:0000921,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006996,GO:0007010,GO:0007049,GO:0008150,GO:0009987,GO:0016043,GO:0019954,GO:0022402,GO:0022414,GO:0022607,GO:0030428,GO:0031106,GO:0032153,GO:0032185,GO:0032505,GO:0032506,GO:0034622,GO:0042802,GO:0043093,GO:0043933,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0051301,GO:0061640,GO:0065003,GO:0070925,GO:0071840,GO:0090529,GO:1902410,GO:1903047 ko:K09888 ko00000,ko03036 Bacteria 1VFZS@1239,3F7ZA@33958,4HP4T@91061,COG3027@1,COG3027@2 NA|NA|NA D Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division HOOMBAJD_01439 568703.LGG_00771 2.3e-53 214.5 Lactobacillaceae yrzB Bacteria 1VAPW@1239,3F6X3@33958,4HKV7@91061,COG3906@1,COG3906@2 NA|NA|NA S Belongs to the UPF0473 family HOOMBAJD_01440 568703.LGG_00770 2.1e-73 281.6 Lactobacillaceae yqgF GO:0000966,GO:0000967,GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008296,GO:0008408,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0022613,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0040007,GO:0042254,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0140097,GO:1901360 ko:K07447 ko00000,ko01000 Bacteria 1V6ER@1239,3F6NI@33958,4HH04@91061,COG0816@1,COG0816@2 NA|NA|NA J Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA HOOMBAJD_01441 1423732.BALS01000001_gene1354 4e-43 180.3 Lactobacillaceae yrzL Bacteria 1VAC4@1239,3F7EG@33958,4HKD0@91061,COG4472@1,COG4472@2 NA|NA|NA S Belongs to the UPF0297 family HOOMBAJD_01442 568703.LGG_02944 5.3e-21 105.9 Lactobacillaceae Bacteria 1TT8V@1239,3F7HJ@33958,4HCE5@91061,COG2801@1,COG2801@2 NA|NA|NA L PFAM Integrase core domain HOOMBAJD_01443 568703.LGG_01138 1.1e-228 799.7 Bacilli Bacteria 1VB1N@1239,4HPVS@91061,COG4722@1,COG4722@2 NA|NA|NA S Phage tail protein HOOMBAJD_01444 39103.U5U708_9CAUD 3.6e-278 965.3 Siphoviridae GO:0008150,GO:0016032,GO:0019058,GO:0019068,GO:0044403,GO:0044419,GO:0051704,GO:0098003 Viruses 4QAK6@10239,4QKKV@10699,4QPBY@28883,4QUP9@35237 NA|NA|NA S peptidoglycan catabolic process HOOMBAJD_01445 1231336.L248_1700 3.1e-21 108.2 Lactobacillaceae Bacteria 1U768@1239,29PXI@1,30AVX@2,3F912@33958,4IH0Z@91061 NA|NA|NA HOOMBAJD_01446 947980.E9LUI9_9CAUD 1.2e-74 286.2 Siphoviridae Viruses 4QAYN@10239,4QKPS@10699,4QPCU@28883,4QUR7@35237 NA|NA|NA S Pfam:Phage_TTP_1 HOOMBAJD_01447 1231336.L248_1697 1.5e-30 139.0 Lactobacillaceae Bacteria 1U6G0@1239,29PDS@1,30ABY@2,3F7U0@33958,4IG81@91061 NA|NA|NA HOOMBAJD_01448 51369.P94214_9CAUD 2.9e-66 257.7 Siphoviridae Viruses 4QB1F@10239,4QKPW@10699,4QPSW@28883,4QUYH@35237 NA|NA|NA S exonuclease activity HOOMBAJD_01449 1231336.L248_1695 4e-40 170.6 Lactobacillaceae Bacteria 1U6TU@1239,2DKS7@1,30AKM@2,3F8H9@33958,4IGMN@91061 NA|NA|NA S Phage head-tail joining protein HOOMBAJD_01450 1231336.L248_1694 2.7e-26 124.8 Lactobacillaceae Bacteria 1U6JX@1239,2EEUA@1,30AEZ@2,3F824@33958,4IGCG@91061 NA|NA|NA S Phage gp6-like head-tail connector protein HOOMBAJD_01451 39103.U5U4N8_9CAUD 1e-21 109.0 Siphoviridae Viruses 4QAK6@10239,4QKP8@10699,4QPBY@28883,4QUP9@35237 NA|NA|NA S peptidase activity HOOMBAJD_01452 39103.U5U4N8_9CAUD 3.9e-202 710.7 Siphoviridae Viruses 4QAK6@10239,4QKP8@10699,4QPBY@28883,4QUP9@35237 NA|NA|NA S peptidase activity HOOMBAJD_01453 51369.Q8LTC1_9CAUD 6.8e-105 386.7 Siphoviridae GO:0003674,GO:0003824,GO:0005575,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016787,GO:0019012,GO:0019538,GO:0043170,GO:0044238,GO:0071704,GO:0140096,GO:1901564 Viruses 4QAK6@10239,4QKP8@10699,4QPBY@28883,4QUP9@35237 NA|NA|NA S peptidase activity HOOMBAJD_01454 39103.U5U764_9CAUD 2.5e-228 797.7 Siphoviridae Viruses 4QAYV@10239,4QKKX@10699,4QPU3@28883,4QUZ7@35237 NA|NA|NA S Phage portal protein HOOMBAJD_01456 51369.Q8LTC3_9CAUD 0.0 1125.5 Siphoviridae Viruses 4QBV3@10239,4QKW5@10699,4QPPJ@28883,4QW0W@35237 NA|NA|NA S Phage Terminase HOOMBAJD_01457 39103.U5U3Z1_9CAUD 8.7e-78 296.2 Caudovirales Viruses 4QBS6@10239,4QPP2@28883,4QUNW@35237 NA|NA|NA S Phage terminase, small subunit HOOMBAJD_01458 947980.E9LUN5_9CAUD 3.3e-72 278.5 Siphoviridae Viruses 4QAKE@10239,4QKTX@10699,4QPCE@28883,4QUP7@35237 NA|NA|NA S HNH endonuclease HOOMBAJD_01460 568703.LGG_01123 5.4e-31 139.8 Lactobacillaceae Bacteria 1U6SS@1239,2BWYP@1,30AJY@2,3F8F9@33958,4IGKB@91061 NA|NA|NA HOOMBAJD_01461 146269.A8YQN3_9CAUD 5.7e-86 324.7 Siphoviridae Viruses 4QCT4@10239,4QN4I@10699,4QQW8@28883,4QWIG@35237 NA|NA|NA HOOMBAJD_01462 146269.A8YQN2_9CAUD 2.8e-152 544.7 Siphoviridae Viruses 4QAXN@10239,4QM0D@10699,4QPV1@28883,4QVNW@35237 NA|NA|NA S D12 class N6 adenine-specific DNA methyltransferase HOOMBAJD_01463 543734.LCABL_05720 1.6e-76 292.0 Bacilli Bacteria 1W51N@1239,2DCNS@1,2ZESF@2,4I1NU@91061 NA|NA|NA HOOMBAJD_01465 1423816.BACQ01000027_gene952 3.1e-37 161.4 Bacteria Bacteria 2EGZP@1,33ART@2 NA|NA|NA S YopX protein HOOMBAJD_01466 1423732.BALS01000058_gene2832 3.6e-19 101.3 Lactobacillaceae Bacteria 1U7QY@1239,29Q9M@1,30B8Q@2,3FA1A@33958,4IHN8@91061 NA|NA|NA HOOMBAJD_01469 568703.LGG_01115 3.4e-33 148.3 Lactobacillaceae Bacteria 1U7JD@1239,29Q9Z@1,30B51@2,3F9TD@33958,4IHGC@91061 NA|NA|NA S Protein of unknown function (DUF1642) HOOMBAJD_01470 568703.LGG_01114 2.4e-26 124.0 Lactobacillaceae Bacteria 1U8C8@1239,29QN8@1,30BMV@2,3FATU@33958,4IIA7@91061 NA|NA|NA HOOMBAJD_01472 568703.LGG_01112 1.3e-54 218.8 Lactobacillaceae rusA Bacteria 1VF2H@1239,3F7S9@33958,4HJ0V@91061,COG4570@1,COG4570@2 NA|NA|NA L Endodeoxyribonuclease RusA HOOMBAJD_01474 146269.A8YQM1_9CAUD 5.5e-231 806.6 Siphoviridae Viruses 4QAWG@10239,4QKWY@10699,4QPII@28883,4QV6X@35237 NA|NA|NA S DNA helicase activity HOOMBAJD_01475 39103.U5U793_9CAUD 2.2e-143 515.0 Siphoviridae Viruses 4QAX8@10239,4QMNN@10699,4QPHH@28883,4QVB1@35237 NA|NA|NA S calcium ion binding HOOMBAJD_01476 39103.U5U726_9CAUD 2.8e-57 228.0 Siphoviridae Viruses 4QAU9@10239,4QKUJ@10699,4QQV4@28883,4QVR2@35237 NA|NA|NA S Single-strand binding protein family HOOMBAJD_01477 39103.U5U4M2_9CAUD 1.8e-119 435.3 Siphoviridae Viruses 4QFVV@10239,4QN2Q@10699,4QSUK@28883,4QYK6@35237 NA|NA|NA S Pfam:HNHc_6 HOOMBAJD_01478 1071400.LBUCD034_0925 3.4e-44 185.3 Lactobacillaceae Bacteria 1U40G@1239,2C9JF@1,32RPD@2,3F86Q@33958,4IFWA@91061 NA|NA|NA S ERF superfamily HOOMBAJD_01479 146269.A8YQL4_9CAUD 3.8e-79 300.8 Viruses Viruses 4QBBN@10239 NA|NA|NA S Siphovirus Gp157 HOOMBAJD_01484 1423816.BACQ01000027_gene970 5.5e-103 380.6 Lactobacillaceae ko:K07741 ko00000 Bacteria 1VFZC@1239,3FB3V@33958,4HWWU@91061,COG3645@1,COG3645@2,COG3646@1,COG3646@2 NA|NA|NA S Phage regulatory protein Rha (Phage_pRha) HOOMBAJD_01485 51369.O64369_9CAUD 3.8e-35 153.7 Siphoviridae Viruses 4QAQV@10239,4QKM5@10699,4QPCB@28883,4QUPK@35237 NA|NA|NA S sequence-specific DNA binding HOOMBAJD_01486 51369.O64370_9CAUD 5.2e-119 433.7 Siphoviridae Viruses 4QAQV@10239,4QKM5@10699,4QPCB@28883,4QUPK@35237 NA|NA|NA S sequence-specific DNA binding HOOMBAJD_01487 1423816.BACQ01000027_gene972 1.2e-67 263.1 Lactobacillaceae tcdC Bacteria 1V6RK@1239,2B0Y6@1,31TB7@2,3F920@33958,4HK0B@91061 NA|NA|NA HOOMBAJD_01489 543734.LCABL_10810 1.8e-20 104.8 Lactobacillaceae Bacteria 1U705@1239,29PSV@1,30AR2@2,3F8SY@33958,4IGUF@91061 NA|NA|NA HOOMBAJD_01490 557436.Lreu_0710 1.9e-34 152.9 Lactobacillaceae Bacteria 1W54N@1239,2DUF0@1,33QC9@2,3F7TI@33958,4I1B2@91061 NA|NA|NA HOOMBAJD_01491 1423732.BALS01000098_gene1435 1.7e-09 68.6 Lactobacillaceae Bacteria 1U7AM@1239,29Q0P@1,30AZ5@2,3F97Y@33958,4IH5K@91061 NA|NA|NA HOOMBAJD_01492 1423816.BACQ01000027_gene974 1.3e-210 738.8 Lactobacillaceae Bacteria 1TPE1@1239,3F3NJ@33958,4HA65@91061,COG0582@1,COG0582@2 NA|NA|NA L Belongs to the 'phage' integrase family HOOMBAJD_01494 568703.LGG_00393 7.1e-59 233.0 Lactobacillaceae manR ko:K02538 ko00000,ko03000 Bacteria 1TSGM@1239,3F482@33958,4HB3W@91061,COG3711@1,COG3711@2 NA|NA|NA K PRD domain HOOMBAJD_01495 568703.LGG_00394 1.4e-69 268.9 Bacilli manR 2.7.1.194,2.7.1.200,2.7.1.202 ko:K02538,ko:K02768,ko:K02769,ko:K02770,ko:K02773,ko:K02806,ko:K02821,ko:K03491 ko00051,ko00052,ko00053,ko01100,ko01120,ko02060,map00051,map00052,map00053,map01100,map01120,map02060 M00273,M00279,M00283,M00550 R03232,R05570,R07671 RC00017,RC03206 ko00000,ko00001,ko00002,ko01000,ko02000,ko03000 4.A.2.1,4.A.5.1,4.A.7.1 Bacteria 1VIS8@1239,4HPYD@91061,COG1762@1,COG1762@2 NA|NA|NA G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HOOMBAJD_01496 568703.LGG_00395 1.6e-76 292.0 Lactobacillaceae 2.7.1.194,2.7.1.200,2.7.1.202 ko:K02768,ko:K02769,ko:K02770,ko:K02773,ko:K02806,ko:K02821,ko:K03491 ko00051,ko00052,ko00053,ko01100,ko01120,ko02060,map00051,map00052,map00053,map01100,map01120,map02060 M00273,M00279,M00283,M00550 R03232,R05570,R07671 RC00017,RC03206 ko00000,ko00001,ko00002,ko01000,ko02000,ko03000 4.A.2.1,4.A.5.1,4.A.7.1 Bacteria 1V5TG@1239,3FCBE@33958,4HHQJ@91061,COG1762@1,COG1762@2 NA|NA|NA G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HOOMBAJD_01497 568703.LGG_00396 8.6e-48 196.1 Lactobacillaceae fruA 2.7.1.202 ko:K02768,ko:K02769,ko:K02770 ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060 M00273 R03232 RC00017,RC03206 ko00000,ko00001,ko00002,ko01000,ko02000 4.A.2.1 Bacteria 1VASC@1239,3F7K8@33958,4HKYF@91061,COG1445@1,COG1445@2 NA|NA|NA G PTS system, Lactose/Cellobiose specific IIB subunit HOOMBAJD_01498 568703.LGG_00397 9e-145 520.0 Lactobacillaceae ko:K02770 ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060 M00273 R03232 RC00017,RC03206 ko00000,ko00001,ko00002,ko02000 4.A.2.1 Bacteria 1TPKU@1239,3F52Q@33958,4H9XS@91061,COG1299@1,COG1299@2 NA|NA|NA G Phosphotransferase System HOOMBAJD_01499 568703.LGG_00398 6.1e-120 436.8 Lactobacillaceae tal 2.2.1.2 ko:K00616 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map01100,map01110,map01120,map01130,map01200,map01230 M00004,M00007 R01827 RC00439,RC00604 ko00000,ko00001,ko00002,ko01000 Bacteria 1TP4Q@1239,3F3X3@33958,4HA8G@91061,COG0176@1,COG0176@2 NA|NA|NA F Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway HOOMBAJD_01500 568703.LGG_00399 2.5e-129 468.0 Lactobacillaceae alsE GO:0003674,GO:0003824,GO:0004750,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006081,GO:0006098,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009052,GO:0009056,GO:0009117,GO:0009987,GO:0016052,GO:0016853,GO:0016854,GO:0016857,GO:0019313,GO:0019314,GO:0019316,GO:0019318,GO:0019320,GO:0019321,GO:0019323,GO:0019362,GO:0019637,GO:0019682,GO:0019693,GO:0034641,GO:0034700,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046365,GO:0046367,GO:0046483,GO:0046496,GO:0046872,GO:0051156,GO:0051186,GO:0055086,GO:0071704,GO:0072524,GO:1901135,GO:1901360,GO:1901564,GO:1901575 5.1.3.1 ko:K01783,ko:K17195 ko00030,ko00040,ko00051,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00051,map00710,map01100,map01110,map01120,map01130,map01200,map01230 M00004,M00007 R01529,R09031 RC00540,RC03111 ko00000,ko00001,ko00002,ko01000 iEcSMS35_1347.EcSMS35_4551 Bacteria 1TT1C@1239,3F5AN@33958,4HDTC@91061,COG0036@1,COG0036@2 NA|NA|NA G Ribulose-phosphate 3 epimerase family HOOMBAJD_01501 568703.LGG_00400 5e-78 297.0 Lactobacillaceae 2.7.1.194,2.7.1.200,2.7.1.202 ko:K02768,ko:K02769,ko:K02770,ko:K02773,ko:K02806,ko:K02821,ko:K03491 ko00051,ko00052,ko00053,ko01100,ko01120,ko02060,map00051,map00052,map00053,map01100,map01120,map02060 M00273,M00279,M00283,M00550 R03232,R05570,R07671 RC00017,RC03206 ko00000,ko00001,ko00002,ko01000,ko02000,ko03000 4.A.2.1,4.A.5.1,4.A.7.1 Bacteria 1VBX4@1239,3F6ZI@33958,4HQB6@91061,COG1762@1,COG1762@2 NA|NA|NA G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HOOMBAJD_01502 568703.LGG_00401 1.9e-43 181.4 Lactobacillaceae ulaB 2.7.1.194,2.7.1.200 ko:K02774,ko:K02822,ko:K03475 ko00052,ko00053,ko01100,ko01120,ko02060,map00052,map00053,map01100,map01120,map02060 M00279,M00283,M00550 R05570,R07671 RC00017,RC03206 ko00000,ko00001,ko00002,ko01000,ko02000 4.A.5.1,4.A.7.1 Bacteria 1VBT2@1239,3F7EB@33958,4HMYC@91061,COG3414@1,COG3414@2 NA|NA|NA G Phosphotransferase system galactitol-specific IIB component HOOMBAJD_01503 568703.LGG_00404 1.3e-180 639.4 Lactobacillaceae ulaA 2.7.1.194 ko:K02822,ko:K03475 ko00053,ko01100,ko01120,ko02060,map00053,map01100,map01120,map02060 M00283,M00550 R07671 RC00017,RC03206 ko00000,ko00001,ko00002,ko01000,ko02000 4.A.7.1 Bacteria 1TQK5@1239,3F4Y4@33958,4HBAD@91061,COG3037@1,COG3037@2 NA|NA|NA S PTS system sugar-specific permease component HOOMBAJD_01504 568703.LGG_00405 2.6e-160 571.2 Lactobacillaceae tktN 2.2.1.1 ko:K00615 ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230 M00004,M00007,M00165,M00167 R01067,R01641,R01830,R06590 RC00032,RC00226,RC00571,RC01560 ko00000,ko00001,ko00002,ko01000 Bacteria 1TT51@1239,3FCFN@33958,4HD97@91061,COG3959@1,COG3959@2 NA|NA|NA G Transketolase, thiamine diphosphate binding domain HOOMBAJD_01505 568703.LGG_00406 1.3e-190 672.2 Firmicutes tktC 2.2.1.1 ko:K00615 ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230 M00004,M00007,M00165,M00167 R01067,R01641,R01830,R06590 RC00032,RC00226,RC00571,RC01560 ko00000,ko00001,ko00002,ko01000 Bacteria 1V0K5@1239,COG3958@1,COG3958@2 NA|NA|NA G Transketolase HOOMBAJD_01506 568703.LGG_00407 1.4e-166 592.0 Lactobacillaceae gmuE 2.7.1.2,2.7.1.4 ko:K00845,ko:K00847 ko00010,ko00051,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00051,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200 M00001,M00549 R00299,R00760,R00867,R01600,R01786,R03920 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 Bacteria 1TQU4@1239,3F3K8@33958,4HA1C@91061,COG1940@1,COG1940@2 NA|NA|NA GK ROK family HOOMBAJD_01507 568703.LGG_00408 1.2e-132 479.2 Lactobacillaceae ko:K02530 ko00000,ko03000 Bacteria 1V097@1239,3F5GM@33958,4HGA7@91061,COG1349@1,COG1349@2 NA|NA|NA K DeoR C terminal sensor domain HOOMBAJD_01508 568703.LGG_00409 6e-61 240.0 Lactobacillaceae 2.7.1.194,2.7.1.200,2.7.1.202 ko:K02768,ko:K02769,ko:K02770,ko:K02773,ko:K02806,ko:K02821,ko:K03491 ko00051,ko00052,ko00053,ko01100,ko01120,ko02060,map00051,map00052,map00053,map01100,map01120,map02060 M00273,M00279,M00283,M00550 R03232,R05570,R07671 RC00017,RC03206 ko00000,ko00001,ko00002,ko01000,ko02000,ko03000 4.A.2.1,4.A.5.1,4.A.7.1 Bacteria 1V751@1239,3F781@33958,4HIRD@91061,COG1762@1,COG1762@2 NA|NA|NA GT Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HOOMBAJD_01509 568703.LGG_00410 4.1e-53 213.8 Lactobacillaceae fruA 2.7.1.202 ko:K02768,ko:K02769,ko:K02770 ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060 M00273 R03232 RC00017,RC03206 ko00000,ko00001,ko00002,ko01000,ko02000 4.A.2.1 Bacteria 1VASC@1239,3F7K8@33958,4HKYF@91061,COG1445@1,COG1445@2 NA|NA|NA G PTS system, Lactose/Cellobiose specific IIB subunit HOOMBAJD_01510 568703.LGG_00411 1.1e-163 582.8 Lactobacillaceae ko:K02770 ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060 M00273 R03232 RC00017,RC03206 ko00000,ko00001,ko00002,ko02000 4.A.2.1 Bacteria 1TPKU@1239,3F52Q@33958,4H9XS@91061,COG1299@1,COG1299@2 NA|NA|NA G Phosphotransferase System HOOMBAJD_01511 568703.LGG_00413 1.1e-150 539.3 Lactobacillaceae 4.1.2.13 ko:K01624 ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230 M00001,M00003,M00165,M00167,M00344,M00345 R01068,R01070,R01829,R02568 RC00438,RC00439,RC00603,RC00604 ko00000,ko00001,ko00002,ko01000 Bacteria 1TRQY@1239,3F6EG@33958,4HDJM@91061,COG0191@1,COG0191@2 NA|NA|NA G Fructose-bisphosphate aldolase class-II HOOMBAJD_01512 568703.LGG_00414 1.5e-169 602.1 Lactobacillaceae fba 4.1.2.13 ko:K01624 ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230 M00001,M00003,M00165,M00167,M00344,M00345 R01068,R01070,R01829,R02568 RC00438,RC00439,RC00603,RC00604 ko00000,ko00001,ko00002,ko01000 Bacteria 1TQ01@1239,3F58Z@33958,4HD42@91061,COG0191@1,COG0191@2 NA|NA|NA G Fructose-bisphosphate aldolase class-II HOOMBAJD_01513 568703.LGG_00415 1.8e-81 308.5 Lactobacillaceae 2.7.1.191 ko:K02794 ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060 M00276 R02630 RC00017,RC03206 ko00000,ko00001,ko00002,ko01000,ko02000 4.A.6.1 Bacteria 1V5VV@1239,3F67C@33958,4HVJT@91061,COG3444@1,COG3444@2 NA|NA|NA G PTS system sorbose subfamily IIB component HOOMBAJD_01514 568703.LGG_00416 4.4e-71 273.9 Lactobacillaceae 2.7.1.191 ko:K02793 ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060 M00276 R02630 RC00017,RC03206 ko00000,ko00001,ko00002,ko01000,ko02000 4.A.6.1 Bacteria 1VCJ2@1239,3F7TA@33958,4HPXK@91061,COG2893@1,COG2893@2 NA|NA|NA G PTS system fructose IIA component HOOMBAJD_01515 568703.LGG_00417 1e-309 1068.5 Lactobacillaceae ko:K02796,ko:K17466 ko00030,ko00051,ko00520,ko01100,ko01120,ko02060,map00030,map00051,map00520,map01100,map01120,map02060 M00276,M00610 R02630,R10407 RC00017,RC03206 ko00000,ko00001,ko00002,ko02000 4.A.6.1,4.A.6.1.17 Bacteria 1TQ5J@1239,3FC6B@33958,4HEQQ@91061,COG3715@1,COG3715@2,COG3716@1,COG3716@2 NA|NA|NA G PTS system sorbose-specific iic component HOOMBAJD_01516 568703.LGG_00418 7.9e-126 456.4 Lactobacillaceae tal 2.2.1.2 ko:K00616 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map01100,map01110,map01120,map01130,map01200,map01230 M00004,M00007 R01827 RC00439,RC00604 ko00000,ko00001,ko00002,ko01000 Bacteria 1TP4Q@1239,3F5F6@33958,4HA8G@91061,COG0176@1,COG0176@2 NA|NA|NA H Transaldolase/Fructose-6-phosphate aldolase HOOMBAJD_01517 568703.LGG_00419 3.7e-169 600.9 Lactobacillaceae ko:K02529 ko00000,ko03000 Bacteria 1TQ7K@1239,3FC5I@33958,4HFJ8@91061,COG1609@1,COG1609@2 NA|NA|NA K helix_turn _helix lactose operon repressor HOOMBAJD_01518 568703.LGG_00420 8.7e-170 602.8 Lactobacillaceae Bacteria 1V2J5@1239,3F975@33958,4HHM0@91061,COG0715@1,COG0715@2 NA|NA|NA P YhfZ C-terminal domain HOOMBAJD_01519 1158610.UC3_01139 7.3e-08 63.5 Enterococcaceae Bacteria 1UP04@1239,2BJ4V@1,32DDZ@2,4B427@81852,4IUW9@91061 NA|NA|NA HOOMBAJD_01520 568703.LGG_00422 3e-57 227.6 Lactobacillaceae yhfU Bacteria 1VA2X@1239,2CDRP@1,32N2F@2,3F9RI@33958,4HK7H@91061 NA|NA|NA S Protein of unknown function DUF2620 HOOMBAJD_01521 568703.LGG_00423 1e-192 679.5 Lactobacillaceae yhfT Bacteria 1TQKB@1239,2CGY9@1,2Z8E9@2,3F9QJ@33958,4HBZ1@91061 NA|NA|NA S Protein of unknown function HOOMBAJD_01522 568703.LGG_00424 1.4e-164 585.5 Lactobacillaceae php GO:0003674,GO:0005488,GO:0008270,GO:0043167,GO:0043169,GO:0046872,GO:0046914 ko:K07048 ko00000 Bacteria 1TS8I@1239,3F9C0@33958,4HC5T@91061,COG1735@1,COG1735@2 NA|NA|NA S Phosphotriesterase family HOOMBAJD_01523 568703.LGG_00425 2.2e-207 728.0 Lactobacillaceae bioF GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008710,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016740,GO:0016746,GO:0016747,GO:0017144,GO:0018130,GO:0019752,GO:0019842,GO:0030170,GO:0032787,GO:0034641,GO:0036094,GO:0042364,GO:0043167,GO:0043168,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0070279,GO:0071704,GO:0072330,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.3.1.47,2.8.1.6 ko:K00652,ko:K01012 ko00780,ko01100,map00780,map01100 M00123,M00573,M00577 R01078,R03210,R10124 RC00004,RC00039,RC00441,RC02725 ko00000,ko00001,ko00002,ko01000,ko01007 iEC55989_1330.EC55989_0819,iECO111_1330.ECO111_0837,iECO26_1355.ECO26_0902,iSDY_1059.SDY_0830 Bacteria 1UM77@1239,3F9K1@33958,4ITSX@91061,COG0156@1,COG0156@2 NA|NA|NA E Cys/Met metabolism PLP-dependent enzyme HOOMBAJD_01524 568703.LGG_00426 1.6e-221 775.0 Lactobacillaceae yhfX Bacteria 1TSX7@1239,3F9FA@33958,4HCY0@91061,COG3457@1,COG3457@2 NA|NA|NA E Alanine racemase, N-terminal domain HOOMBAJD_01525 568703.LGG_00427 8.2e-240 835.9 Lactobacillaceae yhfW GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008973,GO:0016853,GO:0016866,GO:0016868,GO:0044424,GO:0044444,GO:0044464 iAPECO1_1312.APECO1_3083,iEC55989_1330.EC55989_3785,iECED1_1282.ECED1_4038,iECIAI1_1343.ECIAI1_3518,iECOK1_1307.ECOK1_3793,iECS88_1305.ECS88_3765,iEcE24377_1341.EcE24377A_3849,iUMN146_1321.UM146_16955,iUTI89_1310.UTI89_C3878 Bacteria 1TP70@1239,3F9DI@33958,4HA5T@91061,COG1015@1,COG1015@2 NA|NA|NA G Metalloenzyme superfamily HOOMBAJD_01526 568703.LGG_00428 1.1e-158 565.8 Lactobacillaceae salL GO:0003674,GO:0003824,GO:0016740,GO:0016765 2.5.1.63,2.5.1.94 ko:K09134,ko:K21153,ko:K22205 ko00000,ko01000 Bacteria 1TSR3@1239,3F3JD@33958,4HAW6@91061,COG1912@1,COG1912@2 NA|NA|NA K S-adenosyl-l-methionine hydroxide adenosyltransferase HOOMBAJD_01527 568703.LGG_00429 2.7e-97 361.3 Lactobacillaceae ko:K16924,ko:K16927 M00582 ko00000,ko00002,ko02000 3.A.1.29,3.A.1.32 Bacteria 1V1GT@1239,3F5A7@33958,4HGAE@91061,COG4720@1,COG4720@2 NA|NA|NA S UPF0397 protein HOOMBAJD_01528 568703.LGG_00430 0.0 1112.4 Lactobacillaceae 3.6.3.24 ko:K02031,ko:K02032,ko:K10824,ko:K15587,ko:K16786,ko:K16787 ko02010,ko02024,map02010,map02024 M00239,M00440,M00582 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.25,3.A.1.28,3.A.1.29,3.A.1.30,3.A.1.31,3.A.1.32,3.A.1.33,3.A.1.35,3.A.1.5 Bacteria 1VRD0@1239,3FBXM@33958,4ISFN@91061,COG1123@1,COG4172@2 NA|NA|NA P ATP-binding cassette cobalt transporter HOOMBAJD_01529 568703.LGG_00431 8.5e-148 529.6 Lactobacillaceae cbiQ ko:K16785,ko:K16786,ko:K16787 ko02010,map02010 M00582 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.25,3.A.1.28,3.A.1.29,3.A.1.30,3.A.1.31,3.A.1.32,3.A.1.33,3.A.1.35 iSB619.SA_RS14165 Bacteria 1TPMV@1239,3F3Y9@33958,4HBTW@91061,COG0619@1,COG0619@2 NA|NA|NA P cobalt transport HOOMBAJD_01531 568703.LGG_00433 8.7e-212 742.7 Lactobacillaceae menC GO:0006732,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009233,GO:0009234,GO:0009987,GO:0042180,GO:0042181,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901661,GO:1901663 4.2.1.113 ko:K02549 ko00130,ko01100,ko01110,map00130,map01100,map01110 M00116 R04031 RC01053 ko00000,ko00001,ko00002,ko01000 iYO844.BSU30780 Bacteria 1TQMS@1239,3FB6U@33958,4HBMX@91061,COG4948@1,COG4948@2 NA|NA|NA H Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB) HOOMBAJD_01532 568703.LGG_00465 3.8e-224 783.9 Lactobacillaceae Bacteria 1UXYK@1239,3FCBT@33958,4HBU0@91061,COG2271@1,COG2271@2 NA|NA|NA G Major Facilitator Superfamily HOOMBAJD_01533 568703.LGG_00467 4e-240 837.0 Lactobacillaceae Bacteria 1TP2D@1239,3F5JT@33958,4HB9G@91061,COG0624@1,COG0624@2 NA|NA|NA E Peptidase family M20/M25/M40 HOOMBAJD_01534 568703.LGG_00392 1.6e-82 312.0 Lactobacillaceae Bacteria 1U7WF@1239,29FCS@1,302AF@2,3FA9B@33958,4IHTU@91061 NA|NA|NA HOOMBAJD_01535 568703.LGG_00391 4e-56 224.2 Lactobacillaceae Bacteria 1U8A3@1239,29QKZ@1,30BKK@2,3FARD@33958,4II81@91061 NA|NA|NA HOOMBAJD_01536 568703.LGG_00390 5.4e-40 169.9 Lactobacillaceae Bacteria 1VMY1@1239,3F814@33958,4HRA4@91061,COG1396@1,COG1396@2 NA|NA|NA K Helix-turn-helix XRE-family like proteins HOOMBAJD_01537 568703.LGG_00389 3.5e-29 133.7 Lactobacillaceae Bacteria 1U735@1239,2ATAB@1,31ITC@2,3F8WX@33958,4IGXP@91061 NA|NA|NA HOOMBAJD_01538 568703.LGG_00388 7.9e-105 386.3 Lactobacillaceae Bacteria 1VXXQ@1239,2DEN3@1,32U3P@2,3F73U@33958,4HXNG@91061 NA|NA|NA HOOMBAJD_01539 568703.LGG_00387 5.8e-71 273.5 Lactobacillaceae Bacteria 1V939@1239,3F7MR@33958,4HJRC@91061,COG1846@1,COG1846@2 NA|NA|NA K helix_turn_helix multiple antibiotic resistance protein HOOMBAJD_01540 568703.LGG_00386 7.6e-242 842.8 Lactobacillaceae ydiC1 Bacteria 1TPRN@1239,3F4D4@33958,4HBXJ@91061,COG0477@1,COG2814@2 NA|NA|NA EGP Major facilitator Superfamily HOOMBAJD_01541 543734.LCABL_03420 5.7e-93 347.4 Lactobacillaceae Bacteria 1UPZ6@1239,2AIFZ@1,33KBF@2,3F6BW@33958,4IVDJ@91061 NA|NA|NA HOOMBAJD_01542 543734.LCABL_03410 6.9e-63 247.3 Lactobacillaceae Bacteria 1U8J4@1239,29QRY@1,30BRT@2,3FB1I@33958,4IIH3@91061 NA|NA|NA HOOMBAJD_01543 543734.LCABL_03400 8.7e-80 303.5 Lactobacillaceae Bacteria 1U63C@1239,29P41@1,30A28@2,3F6Y1@33958,4IFSS@91061 NA|NA|NA HOOMBAJD_01544 1423732.BALS01000032_gene234 3.8e-87 327.8 Lactobacillaceae ko:K01990 M00254 ko00000,ko00002,ko02000 3.A.1 Bacteria 1V1P4@1239,3F4H6@33958,4I2PJ@91061,COG1131@1,COG1131@2 NA|NA|NA V AAA domain, putative AbiEii toxin, Type IV TA system HOOMBAJD_01545 543734.LCABL_03360 7.2e-52 210.3 Lactobacillaceae Bacteria 1U67I@1239,29P6Z@1,30A52@2,3F796@33958,4IFY3@91061 NA|NA|NA HOOMBAJD_01546 568703.LGG_00382 0.0 1246.9 Lactobacillaceae pbpC ko:K18149,ko:K21467 ko00550,ko01501,map00550,map01501 ko00000,ko00001,ko01011 Bacteria 1TPER@1239,3F5K3@33958,4IQSR@91061,COG0768@1,COG0768@2 NA|NA|NA M NTF2-like N-terminal transpeptidase domain HOOMBAJD_01547 568703.LGG_00380 1.2e-126 459.1 Lactobacillaceae Bacteria 1V564@1239,299D6@1,2ZWG2@2,3F6SE@33958,4HI66@91061 NA|NA|NA S Protein of unknown function (DUF2785) HOOMBAJD_01551 568703.LGG_00375 2.5e-36 159.1 Lactobacillaceae Bacteria 1U8FC@1239,29QQ0@1,30BPR@2,3FAX8@33958,4IID8@91061 NA|NA|NA HOOMBAJD_01552 568703.LGG_00374 1.1e-42 179.5 Firmicutes Bacteria 1VAWH@1239,COG3620@1,COG3620@2 NA|NA|NA K DNA-binding helix-turn-helix protein HOOMBAJD_01553 568703.LGG_00373 2.5e-164 584.7 Lactobacillaceae rbsK 2.7.1.15 ko:K00852 ko00030,map00030 R01051,R02750 RC00002,RC00017 ko00000,ko00001,ko01000 Bacteria 1TQRC@1239,3FB6B@33958,4HE6Z@91061,COG0524@1,COG0524@2 NA|NA|NA H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway HOOMBAJD_01554 543734.LCABL_03250 1.9e-159 568.5 Lactobacillaceae rbsB GO:0003674,GO:0005215,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006935,GO:0008150,GO:0008643,GO:0009605,GO:0015144,GO:0015145,GO:0015749,GO:0015750,GO:0015752,GO:0016020,GO:0016021,GO:0022857,GO:0030246,GO:0030288,GO:0030313,GO:0031224,GO:0031975,GO:0034219,GO:0036094,GO:0040011,GO:0042221,GO:0042330,GO:0042597,GO:0044425,GO:0044464,GO:0048029,GO:0050896,GO:0050918,GO:0051119,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944 ko:K10439 ko02010,ko02030,map02010,map02030 M00212 ko00000,ko00001,ko00002,ko02000 3.A.1.2.1,3.A.1.2.13,3.A.1.2.19 Bacteria 1TQ1B@1239,3FCEY@33958,4HCSN@91061,COG1879@1,COG1879@2 NA|NA|NA G Periplasmic binding protein domain HOOMBAJD_01555 1423816.BACQ01000062_gene2384 1e-152 546.2 Lactobacillaceae rbsC GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0008643,GO:0015144,GO:0015145,GO:0015146,GO:0015591,GO:0015749,GO:0015750,GO:0015752,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0032991,GO:0034219,GO:0043190,GO:0044425,GO:0044459,GO:0044464,GO:0051119,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:0098533,GO:0098796,GO:0098797,GO:1902494,GO:1902495,GO:1904949,GO:1990351 ko:K03549,ko:K10440 ko02010,map02010 M00212 ko00000,ko00001,ko00002,ko02000 2.A.72,3.A.1.2.1,3.A.1.2.13,3.A.1.2.19 iAF1260.b3750,iAPECO1_1312.APECO1_2713,iB21_1397.B21_03581,iBWG_1329.BWG_3441,iE2348C_1286.E2348C_4060,iEC042_1314.EC042_4137,iEC55989_1330.EC55989_4225,iECABU_c1320.ECABU_c42350,iECBD_1354.ECBD_4280,iECB_1328.ECB_03636,iECDH10B_1368.ECDH10B_3938,iECDH1ME8569_1439.ECDH1ME8569_3638,iECED1_1282.ECED1_4440,iECH74115_1262.ECH74115_5186,iECIAI1_1343.ECIAI1_3934,iECNA114_1301.ECNA114_3899,iECO103_1326.ECO103_4407,iECO111_1330.ECO111_4584,iECO26_1355.ECO26_4828,iECOK1_1307.ECOK1_4199,iECS88_1305.ECS88_4172,iECSE_1348.ECSE_4040,iECSF_1327.ECSF_3598,iECSP_1301.ECSP_4800,iECUMN_1333.ECUMN_4280,iECs_1301.ECs4692,iEcDH1_1363.EcDH1_4217,iEcE24377_1341.EcE24377A_4266,iEcHS_1320.EcHS_A3966,iEcSMS35_1347.EcSMS35_4118,iEcolC_1368.EcolC_4244,iJO1366.b3750,iJR904.b3750,iLF82_1304.LF82_1817,iNRG857_1313.NRG857_18675,iUMN146_1321.UM146_18940,iUMNK88_1353.UMNK88_4562,iUTI89_1310.UTI89_C4305,iY75_1357.Y75_RS18320,ic_1306.c4678 Bacteria 1TP72@1239,3F5NF@33958,4H9Y3@91061,COG1172@1,COG1172@2 NA|NA|NA U Belongs to the binding-protein-dependent transport system permease family HOOMBAJD_01556 1423816.BACQ01000062_gene2383 5.1e-268 929.9 Lactobacillaceae rbsA GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008144,GO:0008150,GO:0008643,GO:0015144,GO:0015145,GO:0015146,GO:0015399,GO:0015405,GO:0015407,GO:0015591,GO:0015608,GO:0015611,GO:0015749,GO:0015750,GO:0015752,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0030554,GO:0031224,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0034219,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0043167,GO:0043168,GO:0043190,GO:0043211,GO:0043492,GO:0044425,GO:0044459,GO:0044464,GO:0051119,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:0097159,GO:0097367,GO:0098533,GO:0098796,GO:0098797,GO:1901265,GO:1901363,GO:1902494,GO:1902495,GO:1904949,GO:1990351 3.6.3.17 ko:K10441,ko:K10542 ko02010,map02010 M00212,M00214 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.2.1,3.A.1.2.13,3.A.1.2.19,3.A.1.2.3 iEC55989_1330.EC55989_4224,iECSE_1348.ECSE_4039,iECW_1372.ECW_m4052,iEcE24377_1341.EcE24377A_4265,iWFL_1372.ECW_m4052,iYL1228.KPN_04154 Bacteria 1TP6I@1239,3FBUB@33958,4H9VK@91061,COG1129@1,COG1129@2 NA|NA|NA G ABC transporter HOOMBAJD_01557 543734.LCABL_03220 8.3e-61 239.6 Lactobacillaceae rbsD GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006014,GO:0006810,GO:0008150,GO:0008152,GO:0008643,GO:0009056,GO:0015144,GO:0015145,GO:0015146,GO:0015399,GO:0015405,GO:0015407,GO:0015591,GO:0015608,GO:0015611,GO:0015749,GO:0015750,GO:0015752,GO:0016052,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016866,GO:0016887,GO:0017111,GO:0019303,GO:0019321,GO:0019323,GO:0022804,GO:0022857,GO:0034219,GO:0042623,GO:0042626,GO:0042802,GO:0043211,GO:0043492,GO:0044238,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046365,GO:0051119,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071704,GO:1901575 5.4.99.62 ko:K06726 ko02010,map02010 R08247 RC02247 ko00000,ko00001,ko01000 iAF1260.b3748,iBWG_1329.BWG_3439,iECDH10B_1368.ECDH10B_3936,iECDH1ME8569_1439.ECDH1ME8569_3636,iECH74115_1262.ECH74115_5184,iECSP_1301.ECSP_4798,iECs_1301.ECs4690,iETEC_1333.ETEC_4039,iEcDH1_1363.EcDH1_4219,iJO1366.b3748,iJR904.b3748,iY75_1357.Y75_RS18330 Bacteria 1VA2V@1239,3F6GA@33958,4HIFW@91061,COG1869@1,COG1869@2 NA|NA|NA G Catalyzes the interconversion of beta-pyran and beta- furan forms of D-ribose HOOMBAJD_01558 568703.LGG_00372 1e-187 662.5 Lactobacillaceae rbsR ko:K02529 ko00000,ko03000 Bacteria 1TQ7K@1239,3F44Q@33958,4HE07@91061,COG1609@1,COG1609@2 NA|NA|NA K Periplasmic binding proteins and sugar binding domain of LacI family HOOMBAJD_01559 568703.LGG_00371 4.8e-271 939.9 Lactobacillaceae ko:K20265 ko02024,map02024 ko00000,ko00001,ko02000 2.A.3.7.1,2.A.3.7.3 Bacteria 1UYSD@1239,3F48U@33958,4IPMN@91061,COG0531@1,COG0531@2 NA|NA|NA E Amino acid permease HOOMBAJD_01560 568703.LGG_00370 5.3e-153 547.0 Lactobacillaceae thiD GO:0008150,GO:0040007 2.5.1.3,2.7.1.49,2.7.4.7,4.1.99.17 ko:K00941,ko:K03147,ko:K21219 ko00730,ko01100,map00730,map01100 M00127 R03223,R03471,R03472,R04509,R10712 RC00002,RC00017,RC00224,RC03251,RC03252,RC03255,RC03397 ko00000,ko00001,ko00002,ko01000 Bacteria 1TQ4A@1239,3F3NA@33958,4HAAH@91061,COG0351@1,COG0351@2 NA|NA|NA H Phosphomethylpyrimidine kinase HOOMBAJD_01561 568703.LGG_00369 7.5e-104 383.3 Lactobacillaceae thiE GO:0003674,GO:0003824,GO:0004789,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.3 ko:K00788 ko00730,ko01100,map00730,map01100 M00127 R03223,R10712 RC00224,RC03255,RC03397 ko00000,ko00001,ko00002,ko01000 Bacteria 1V3ZR@1239,3FB7Y@33958,4HH1E@91061,COG0352@1,COG0352@2 NA|NA|NA H Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) HOOMBAJD_01562 568703.LGG_00368 1.9e-150 538.5 Lactobacillaceae thiM 2.7.1.50 ko:K00878 ko00730,ko01100,map00730,map01100 M00127 R04448 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 Bacteria 1V1R6@1239,3F43J@33958,4HFTJ@91061,COG2145@1,COG2145@2 NA|NA|NA H Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ) HOOMBAJD_01563 568703.LGG_00367 2.4e-81 308.1 Lactobacillaceae thiW ko:K16786,ko:K16787 ko02010,map02010 M00582 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.25,3.A.1.28,3.A.1.29,3.A.1.30,3.A.1.31,3.A.1.32,3.A.1.33,3.A.1.35 Bacteria 1V6HH@1239,3F6M6@33958,4HHG6@91061,COG4732@1,COG4732@2 NA|NA|NA S Thiamine-precursor transporter protein (ThiW) HOOMBAJD_01564 568703.LGG_00366 1e-125 456.1 Lactobacillaceae tenA GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 3.5.99.2 ko:K03707 ko00730,ko01100,map00730,map01100 R02133,R09993 RC00224,RC00652,RC02832 ko00000,ko00001,ko01000,ko03000 Bacteria 1TPK0@1239,3FB7U@33958,4HCPF@91061,COG0819@1,COG0819@2 NA|NA|NA K Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway HOOMBAJD_01565 568703.LGG_00365 1.9e-110 405.2 Lactobacillaceae ko:K16785 ko02010,map02010 M00582 ko00000,ko00001,ko00002,ko02000 3.A.1.25,3.A.1.28,3.A.1.29,3.A.1.30,3.A.1.31,3.A.1.32,3.A.1.33,3.A.1.35 Bacteria 1TUDZ@1239,3F4FG@33958,4HCPC@91061,COG0619@1,COG0619@2 NA|NA|NA P cobalt transport HOOMBAJD_01566 568703.LGG_00364 3.7e-241 840.5 Lactobacillaceae ko:K02006,ko:K16784,ko:K16786,ko:K16787,ko:K16927 ko02010,map02010 M00245,M00246,M00581,M00582 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.18,3.A.1.22,3.A.1.23,3.A.1.25,3.A.1.25.1,3.A.1.28,3.A.1.29,3.A.1.30,3.A.1.31,3.A.1.32,3.A.1.33,3.A.1.35 Bacteria 1TPH8@1239,3FBS0@33958,4HAJM@91061,COG1122@1,COG1122@2 NA|NA|NA P ABC transporter HOOMBAJD_01567 568703.LGG_00363 5.7e-95 353.6 Lactobacillaceae ko:K16925 M00582 ko00000,ko00002,ko02000 3.A.1.30 Bacteria 1V2G5@1239,3FBNZ@33958,4IRFG@91061,COG4721@1,COG4721@2 NA|NA|NA S ABC-type cobalt transport system, permease component HOOMBAJD_01568 543734.LCABL_03340 2.8e-27 129.0 Lactobacillaceae Bacteria 1U8FC@1239,29QQ0@1,30BPR@2,3FAX8@33958,4IID8@91061 NA|NA|NA HOOMBAJD_01569 543734.LCABL_03330 4.2e-33 148.3 Lactobacillaceae Bacteria 1U8FC@1239,29QQ0@1,30BPR@2,3FAX8@33958,4IID8@91061 NA|NA|NA HOOMBAJD_01570 543734.LCABL_02930 1.5e-140 505.8 Lactobacillaceae XK27_08455 ko:K02795 ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060 M00276 R02630 RC00017,RC03206 ko00000,ko00001,ko00002,ko02000 4.A.6.1 Bacteria 1TSX0@1239,3F4X4@33958,4HBRB@91061,COG3715@1,COG3715@2 NA|NA|NA G PTS system sorbose-specific iic component HOOMBAJD_01571 568703.LGG_00337 8.1e-82 309.7 Lactobacillaceae manX_1 2.7.1.191 ko:K02794 ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060 M00276 R02630 RC00017,RC03206 ko00000,ko00001,ko00002,ko01000,ko02000 4.A.6.1 Bacteria 1V46G@1239,3FC7S@33958,4HHPN@91061,COG3444@1,COG3444@2 NA|NA|NA G PTS system sorbose subfamily IIB component HOOMBAJD_01572 568703.LGG_00336 0.0 1236.1 Lactobacillaceae bgaC 3.2.1.23 ko:K01190,ko:K12308 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 R01105,R01678,R03355,R04783,R06114 RC00049,RC00452 ko00000,ko00001,ko01000 Bacteria 1TSHK@1239,3F5XU@33958,4HBAR@91061,COG1874@1,COG1874@2 NA|NA|NA G Glycosyl hydrolases family 35 HOOMBAJD_01573 568703.LGG_00334 9.2e-225 785.8 Lactobacillaceae nagA 3.5.1.25 ko:K01443 ko00520,ko01130,map00520,map01130 R02059 RC00166,RC00300 ko00000,ko00001,ko01000 Bacteria 1TPFK@1239,3F40F@33958,4HC6C@91061,COG1820@1,COG1820@2 NA|NA|NA G Belongs to the metallo-dependent hydrolases superfamily. NagA family HOOMBAJD_01574 568703.LGG_00333 2.9e-218 764.2 Lactobacillaceae agaS GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0008643,GO:0009401,GO:0015144,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034219,GO:0044425,GO:0044459,GO:0044464,GO:0051119,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944 ko:K02082 ko00000,ko01000 Bacteria 1TQUT@1239,3F3YS@33958,4HDKQ@91061,COG2222@1,COG2222@2 NA|NA|NA G SIS domain HOOMBAJD_01575 568703.LGG_00332 9e-130 469.5 Lactobacillaceae XK27_08435 ko:K03710 ko00000,ko03000 Bacteria 1UYYY@1239,3F5F4@33958,4HGI6@91061,COG2188@1,COG2188@2 NA|NA|NA K UTRA HOOMBAJD_01576 568703.LGG_00331 4.1e-194 683.7 Lactobacillaceae manA 5.3.1.8 ko:K01809 ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130 M00114 R01819 RC00376 ko00000,ko00001,ko00002,ko01000 Bacteria 1VRGI@1239,3F40I@33958,4HBFW@91061,COG1482@1,COG1482@2 NA|NA|NA G mannose-6-phosphate isomerase HOOMBAJD_01577 568703.LGG_00330 2.2e-82 312.0 Lactobacillaceae Bacteria 1UFZH@1239,29V33@1,30GGE@2,3F5BQ@33958,4IF1H@91061 NA|NA|NA HOOMBAJD_01578 568703.LGG_00329 1.6e-238 831.6 Lactobacillaceae malE ko:K02027,ko:K05813 ko02010,map02010 M00198,M00207 ko00000,ko00001,ko00002,ko02000 3.A.1.1,3.A.1.1.3 Bacteria 1TSBD@1239,3F5HX@33958,4IQ65@91061,COG1653@1,COG1653@2 NA|NA|NA G Bacterial extracellular solute-binding protein HOOMBAJD_01579 568703.LGG_00328 0.0 1535.0 Lactobacillaceae dinG 3.1.12.1,3.6.4.12 ko:K07464,ko:K10844 ko03022,ko03420,map03022,map03420 M00290 ko00000,ko00001,ko00002,ko01000,ko02048,ko03021,ko03400 Bacteria 1TPNB@1239,3F473@33958,4HD6T@91061,COG1199@1,COG1199@2 NA|NA|NA KL DEAD_2 HOOMBAJD_01580 568703.LGG_00327 8.9e-119 433.0 Lactobacillaceae Bacteria 1VJZJ@1239,2EEPZ@1,338HP@2,3F55G@33958,4HR6K@91061 NA|NA|NA HOOMBAJD_01581 568703.LGG_00326 4.8e-154 550.4 Lactobacillaceae sepS16B Bacteria 1US2T@1239,28MN3@1,2ZAXQ@2,3F55K@33958,4HW4H@91061 NA|NA|NA HOOMBAJD_01582 936140.AEOT01000010_gene576 9.3e-235 819.3 Lactobacillaceae lacG GO:0003674,GO:0003824,GO:0004553,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0008422,GO:0015926,GO:0016787,GO:0016798,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:1901135,GO:1901657 3.2.1.85 ko:K01220 ko00052,ko01100,map00052,map01100 R03256 RC00049 ko00000,ko00001,ko01000 Bacteria 1TP19@1239,3FC7B@33958,4H9KU@91061,COG2723@1,COG2723@2 NA|NA|NA G Belongs to the glycosyl hydrolase 1 family HOOMBAJD_01583 1423732.BALS01000028_gene2284 5.2e-57 226.9 Lactobacillaceae lacF 2.7.1.196,2.7.1.205,2.7.1.207 ko:K02759,ko:K02786 ko00052,ko00500,ko01100,ko02060,map00052,map00500,map01100,map02060 M00275,M00281 R04393,R11170,R11172 RC00017,RC03206 ko00000,ko00001,ko00002,ko01000,ko02000 4.A.3.1,4.A.3.2 Bacteria 1VHIU@1239,3FCDJ@33958,4HNX4@91061,COG1447@1,COG1447@2 NA|NA|NA G PTS system, Lactose/Cellobiose specific IIA subunit HOOMBAJD_01584 1423732.BALS01000028_gene2283 2.1e-144 518.5 Lactobacillaceae ko:K02531,ko:K02538 ko00000,ko03000 Bacteria 1TT5A@1239,3F4SJ@33958,4HC5Y@91061,COG3711@1,COG3711@2 NA|NA|NA K CAT RNA binding domain HOOMBAJD_01585 1423732.BALS01000028_gene2282 5.5e-261 906.7 Lactobacillaceae lacE-1 2.7.1.196,2.7.1.205,2.7.1.207 ko:K02760,ko:K02787,ko:K02788 ko00052,ko00500,ko01100,ko02060,map00052,map00500,map01100,map02060 M00275,M00281 R04393,R11170,R11172 RC00017,RC03206 ko00000,ko00001,ko00002,ko01000,ko02000 4.A.3.1,4.A.3.2 Bacteria 1TQPV@1239,3F4DV@33958,4HC9I@91061,COG1440@1,COG1440@2,COG1455@1,COG1455@2 NA|NA|NA G Phosphotransferase system, EIIC HOOMBAJD_01586 568703.LGG_00325 3.2e-261 907.1 Lactobacillaceae nox 1.6.3.4 ko:K17869 ko00000,ko01000 Bacteria 1TPWW@1239,3F449@33958,4H9U7@91061,COG0446@1,COG0446@2 NA|NA|NA C NADH oxidase HOOMBAJD_01587 568703.LGG_00324 6.8e-143 514.2 Lactobacillaceae p75 ko:K21471 ko00000,ko01000,ko01002,ko01011 Bacteria 1VG0Z@1239,3F50V@33958,4HBE9@91061,COG0791@1,COG0791@2 NA|NA|NA M NlpC P60 family protein HOOMBAJD_01588 568703.LGG_00323 2.5e-127 461.5 Lactobacillaceae deoD GO:0003674,GO:0003824,GO:0004731,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006152,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009116,GO:0009164,GO:0009987,GO:0015949,GO:0016740,GO:0016757,GO:0016763,GO:0019439,GO:0019686,GO:0033554,GO:0034641,GO:0034655,GO:0034656,GO:0042278,GO:0042802,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:1901135,GO:1901136,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901657,GO:1901658 2.4.2.1,2.4.2.28 ko:K00772,ko:K03784 ko00230,ko00240,ko00270,ko00760,ko01100,ko01110,map00230,map00240,map00270,map00760,map01100,map01110 M00034 R01402,R01561,R01863,R01969,R02147,R02294,R02295,R02297,R02484,R02557,R02748,R08368,R10244 RC00033,RC00063,RC00122,RC02819 ko00000,ko00001,ko00002,ko01000 iAPECO1_1312.APECO1_1997,iB21_1397.B21_04226,iE2348C_1286.E2348C_4682,iEC042_1314.EC042_4881,iECABU_c1320.ECABU_c50190,iECBD_1354.ECBD_3636,iECB_1328.ECB_04260,iECD_1391.ECD_04260,iECED1_1282.ECED1_5255,iECIAI39_1322.ECIAI39_4916,iECNA114_1301.ECNA114_4626,iECO26_1355.ECO26_5590,iECOK1_1307.ECOK1_4950,iECP_1309.ECP_4768,iEcolC_1368.EcolC_3672,iLF82_1304.LF82_0467,iNRG857_1313.NRG857_22170,iPC815.YPO0440,iSFV_1184.SFV_4418,iSF_1195.SF4416,iSFxv_1172.SFxv_4809,iS_1188.S4687,iUMN146_1321.UM146_22680,iUMNK88_1353.UMNK88_5303,iUTI89_1310.UTI89_C5155,ic_1306.c5468 Bacteria 1TQPG@1239,3F4K1@33958,4HADM@91061,COG0813@1,COG0813@2 NA|NA|NA F Purine nucleoside phosphorylase HOOMBAJD_01589 568703.LGG_00322 4e-231 807.0 Lactobacillaceae deoB GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008973,GO:0016853,GO:0016866,GO:0016868,GO:0044424,GO:0044444,GO:0044464 5.4.2.7 ko:K01839 ko00030,ko00230,map00030,map00230 R01057,R02749 RC00408 ko00000,ko00001,ko01000 Bacteria 1TP70@1239,3F3Y4@33958,4H9RU@91061,COG1015@1,COG1015@2 NA|NA|NA G Phosphotransfer between the C1 and C5 carbon atoms of pentose HOOMBAJD_01590 568703.LGG_00321 1.5e-115 422.5 Lactobacillaceae deoC GO:0003674,GO:0003824,GO:0004139,GO:0005975,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009166,GO:0009262,GO:0009264,GO:0009987,GO:0016052,GO:0016829,GO:0016830,GO:0016832,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 4.1.2.4,5.4.2.8 ko:K01619,ko:K01840 ko00030,ko00051,ko00520,ko01100,ko01110,ko01130,map00030,map00051,map00520,map01100,map01110,map01130 M00114 R01066,R01818 RC00408,RC00436,RC00437 ko00000,ko00001,ko00002,ko01000 Bacteria 1TPAJ@1239,3F4M3@33958,4HAAJ@91061,COG0274@1,COG0274@2 NA|NA|NA F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate HOOMBAJD_01591 568703.LGG_00320 1e-232 812.4 Lactobacillaceae celB 2.7.1.207 ko:K02761,ko:K02787,ko:K02788 ko00052,ko00500,ko01100,ko02060,map00052,map00500,map01100,map02060 M00275,M00281 R04393,R11170,R11172 RC00017,RC03206 ko00000,ko00001,ko00002,ko01000,ko02000 4.A.3.1,4.A.3.2 Bacteria 1TP8D@1239,3FC6Y@33958,4HE28@91061,COG1455@1,COG1455@2 NA|NA|NA G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane HOOMBAJD_01592 568703.LGG_00319 4e-167 594.0 Lactobacillaceae Bacteria 1V8NG@1239,3F41V@33958,4HJ22@91061,COG4814@1,COG4814@2 NA|NA|NA S Alpha/beta hydrolase of unknown function (DUF915) HOOMBAJD_01593 568703.LGG_00649 1.9e-267 927.9 Lactobacillaceae celB GO:0005975,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016310,GO:0044237,GO:0044238,GO:0044262,GO:0046835,GO:0071704 2.7.1.196,2.7.1.205,2.7.1.207 ko:K02760,ko:K02761,ko:K02787,ko:K02788 ko00052,ko00500,ko01100,ko02060,map00052,map00500,map01100,map02060 M00275,M00281 R04393,R11170,R11172 RC00017,RC03206 ko00000,ko00001,ko00002,ko01000,ko02000 4.A.3.1,4.A.3.2 Bacteria 1TQPV@1239,3F4DV@33958,4HC9I@91061,COG1440@1,COG1440@2,COG1455@1,COG1455@2 NA|NA|NA G Phosphotransferase system, EIIC HOOMBAJD_01594 543734.LCABL_07280 8.1e-247 859.4 Lactobacillaceae lacG 3.2.1.85 ko:K01220 ko00052,ko01100,map00052,map01100 R03256 RC00049 ko00000,ko00001,ko01000 Bacteria 1TP19@1239,3FC7B@33958,4H9KU@91061,COG2723@1,COG2723@2 NA|NA|NA G Belongs to the glycosyl hydrolase 1 family HOOMBAJD_01595 568703.LGG_00652 1.9e-50 204.9 Lactobacillaceae lacF 2.7.1.196,2.7.1.205,2.7.1.207 ko:K02759,ko:K02786 ko00052,ko00500,ko01100,ko02060,map00052,map00500,map01100,map02060 M00275,M00281 R04393,R11170,R11172 RC00017,RC03206 ko00000,ko00001,ko00002,ko01000,ko02000 4.A.3.1,4.A.3.2 Bacteria 1V87W@1239,3FCDI@33958,4HJSY@91061,COG1447@1,COG1447@2 NA|NA|NA G PTS system, Lactose/Cellobiose specific IIA subunit HOOMBAJD_01596 568703.LGG_00653 6.2e-221 773.1 Lactobacillaceae galK GO:0005975,GO:0005996,GO:0006012,GO:0008150,GO:0008152,GO:0019318,GO:0044238,GO:0044281,GO:0071704 2.7.1.6 ko:K00849 ko00052,ko00520,ko01100,map00052,map00520,map01100 M00554,M00632 R01092 RC00002,RC00078 ko00000,ko00001,ko00002,ko01000,ko04147 Bacteria 1TPD0@1239,3F3Q9@33958,4HARP@91061,COG0153@1,COG0153@2 NA|NA|NA F Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P) HOOMBAJD_01597 568703.LGG_00654 2.1e-193 681.4 Lactobacillaceae galE 5.1.3.2 ko:K01784 ko00052,ko00520,ko01100,map00052,map00520,map01100 M00361,M00362,M00632 R00291,R02984 RC00289 ko00000,ko00001,ko00002,ko01000 Bacteria 1TQ7N@1239,3F3YF@33958,4H9U5@91061,COG1087@1,COG1087@2 NA|NA|NA M Belongs to the NAD(P)-dependent epimerase dehydratase family HOOMBAJD_01598 568703.LGG_00655 1.1e-283 981.9 Lactobacillaceae galT 2.7.7.12 ko:K00965 ko00052,ko00520,ko01100,ko04917,map00052,map00520,map01100,map04917 M00362,M00554,M00632 R00955 RC00002 ko00000,ko00001,ko00002,ko01000 Bacteria 1TPBN@1239,3F4D8@33958,4HAYJ@91061,COG4468@1,COG4468@2 NA|NA|NA G UDP-glucose--hexose-1-phosphate uridylyltransferase HOOMBAJD_01599 568703.LGG_00656 1.2e-161 575.9 Lactobacillaceae ko:K02529 ko00000,ko03000 Bacteria 1TPZJ@1239,3F3PB@33958,4HC9Z@91061,COG1609@1,COG1609@2 NA|NA|NA K Transcriptional regulator HOOMBAJD_01600 568703.LGG_00657 9.9e-191 672.5 Lactobacillaceae galM 5.1.3.3 ko:K01785 ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130 M00632 R01602,R10619 RC00563 ko00000,ko00001,ko00002,ko01000 Bacteria 1TQGJ@1239,3F48R@33958,4HADZ@91061,COG2017@1,COG2017@2 NA|NA|NA G Catalyzes the interconversion of alpha and beta anomers of maltose HOOMBAJD_01602 543734.LCABL_07380 3.3e-70 271.2 Lactobacillaceae 2.7.1.194,2.7.1.200,2.7.1.202,2.7.1.204 ko:K02768,ko:K02769,ko:K02770,ko:K02773,ko:K02806,ko:K02821,ko:K03491,ko:K11201,ko:K20112 ko00051,ko00052,ko00053,ko01100,ko01120,ko02060,map00051,map00052,map00053,map01100,map01120,map02060 M00273,M00279,M00283,M00306,M00550,M00807 R03232,R05570,R07671,R11171 RC00017,RC03206 ko00000,ko00001,ko00002,ko01000,ko02000,ko03000 4.A.2.1,4.A.5,4.A.5.1,4.A.7.1 Bacteria 1VBW9@1239,3FBMU@33958,4IR84@91061,COG1762@1,COG1762@2 NA|NA|NA G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HOOMBAJD_01603 1423816.BACQ01000077_gene2635 1.7e-48 198.4 Lactobacillaceae 2.7.1.200,2.7.1.204 ko:K02774,ko:K20113 ko00052,ko01100,ko02060,map00052,map01100,map02060 M00279,M00807 R05570,R11171 RC00017,RC03206 ko00000,ko00001,ko00002,ko01000,ko02000 4.A.5,4.A.5.1 Bacteria 1VACD@1239,3F732@33958,4HKHR@91061,COG3414@1,COG3414@2 NA|NA|NA G PTS system, Lactose/Cellobiose specific IIB subunit HOOMBAJD_01604 543734.LCABL_07400 2.3e-249 867.8 Lactobacillaceae gatC ko:K02775,ko:K20114 ko00052,ko01100,ko02060,map00052,map01100,map02060 M00279,M00807 R05570,R11171 RC00017,RC03206 ko00000,ko00001,ko00002,ko02000 4.A.5,4.A.5.1 Bacteria 1TQ10@1239,3FCCG@33958,4HBJG@91061,COG3775@1,COG3775@2 NA|NA|NA G PTS system sugar-specific permease component HOOMBAJD_01606 568703.LGG_00661 1.7e-28 131.3 Lactobacillaceae Bacteria 1U8CP@1239,29QNH@1,30BN4@2,3FAUA@33958,4IIAN@91061 NA|NA|NA HOOMBAJD_01607 568703.LGG_00662 4.1e-184 650.6 Lactobacillaceae Bacteria 1U7F7@1239,3F9IK@33958,4IHB6@91061,COG1680@1,COG1680@2 NA|NA|NA V Beta-lactamase HOOMBAJD_01608 568703.LGG_00663 3.2e-124 451.1 Lactobacillaceae Bacteria 1U95M@1239,28PTU@1,2ZCEZ@2,3F6AW@33958,4HMHN@91061 NA|NA|NA S Domain of unknown function (DUF4867) HOOMBAJD_01609 568703.LGG_00664 1.6e-174 618.6 Lactobacillaceae lacC 2.7.1.11,2.7.1.144,2.7.1.56 ko:K00882,ko:K00917,ko:K16370 ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130,map01200,map01230 M00001,M00345 R00756,R02071,R03236,R03237,R03238,R03239,R04779 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 Bacteria 1TR9H@1239,3F56E@33958,4HAGR@91061,COG1105@1,COG1105@2 NA|NA|NA H pfkB family carbohydrate kinase HOOMBAJD_01610 568703.LGG_00665 1.1e-181 642.5 Lactobacillaceae yihT GO:0003674,GO:0003824,GO:0006066,GO:0006082,GO:0006790,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016054,GO:0016829,GO:0016830,GO:0016832,GO:0019637,GO:0034308,GO:0042180,GO:0044237,GO:0044248,GO:0044273,GO:0044281,GO:0044282,GO:0061595,GO:0061720,GO:0071704,GO:1901135,GO:1901136,GO:1901575,GO:1901615,GO:1902776,GO:1902777 4.1.2.40,4.1.2.57 ko:K01635,ko:K01671 ko00052,ko01100,ko02024,map00052,map01100,map02024 R01069,R10760 RC00438,RC00439 ko00000,ko00001,ko01000 Bacteria 1TQRR@1239,3F3UA@33958,4HBS9@91061,COG3684@1,COG3684@2 NA|NA|NA G Belongs to the aldolase LacD family HOOMBAJD_01611 568703.LGG_00666 9.9e-94 349.4 Lactobacillaceae rpiB 2.1.1.222,2.1.1.64,5.3.1.26,5.3.1.6 ko:K00568,ko:K01808,ko:K01819 ko00030,ko00051,ko00052,ko00130,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00051,map00052,map00130,map00710,map01100,map01110,map01120,map01130,map01200,map01230 M00004,M00007,M00117,M00165,M00167 R01056,R03240,R04988,R05614,R08769,R08781,R09030 RC00003,RC00376,RC00392,RC00434,RC01895 ko00000,ko00001,ko00002,ko01000 Bacteria 1U9Y4@1239,3F41M@33958,4HE4C@91061,COG0698@1,COG0698@2 NA|NA|NA G Ribose/Galactose Isomerase HOOMBAJD_01612 568703.LGG_00667 6.1e-73 280.0 Lactobacillaceae lacA 5.3.1.26 ko:K01819 ko00052,ko01100,map00052,map01100 R03240 RC00376 ko00000,ko00001,ko01000 Bacteria 1V5VZ@1239,3F6CQ@33958,4HJK6@91061,COG0698@1,COG0698@2 NA|NA|NA G Ribose/Galactose Isomerase HOOMBAJD_01613 568703.LGG_00668 1.9e-141 508.4 Lactobacillaceae lacR ko:K02530 ko00000,ko03000 Bacteria 1V097@1239,3F5GM@33958,4HGA7@91061,COG1349@1,COG1349@2 NA|NA|NA K DeoR C terminal sensor domain HOOMBAJD_01614 568703.LGG_00669 5e-116 423.7 Lactobacillaceae gph 3.1.3.18 ko:K01091 ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130 R01334 RC00017 ko00000,ko00001,ko01000 Bacteria 1V7U6@1239,3F658@33958,4HJ9I@91061,COG0546@1,COG0546@2 NA|NA|NA S HAD hydrolase, family IA, variant HOOMBAJD_01615 568703.LGG_00670 3.4e-208 730.7 Lactobacillaceae sbcD ko:K03547 ko00000,ko03400 Bacteria 1TQY6@1239,3F4A9@33958,4HAKB@91061,COG0420@1,COG0420@2 NA|NA|NA L SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity HOOMBAJD_01616 568703.LGG_00671 0.0 1327.8 Lactobacillaceae sbcC ko:K03546 ko00000,ko03400 Bacteria 1TPCS@1239,3F3TE@33958,4H9Q3@91061,COG0419@1,COG0419@2 NA|NA|NA L Putative exonuclease SbcCD, C subunit HOOMBAJD_01617 568703.LGG_02284 5.8e-288 996.1 Lactobacillaceae 2.4.1.52 ko:K00712 ko00000,ko01000,ko01003 GT4 Bacteria 1UY71@1239,3FC1Q@33958,4HFBM@91061,COG0438@1,COG0438@2 NA|NA|NA M Glycosyl transferases group 1 HOOMBAJD_01618 568703.LGG_02285 3.3e-302 1043.5 Lactobacillaceae 2.4.1.52 ko:K00712 ko00000,ko01000,ko01003 GT4 Bacteria 1TR6K@1239,3F4P6@33958,4HGDG@91061,COG0438@1,COG0438@2 NA|NA|NA M An N-acetylglucosaminyl transferase that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon HOOMBAJD_01619 568703.LGG_02286 3.3e-261 907.1 Lactobacillaceae gabD 1.2.1.16,1.2.1.20,1.2.1.79 ko:K00135 ko00250,ko00310,ko00350,ko00650,ko00760,ko01100,ko01120,map00250,map00310,map00350,map00650,map00760,map01100,map01120 M00027 R00713,R00714,R02401 RC00080 ko00000,ko00001,ko00002,ko01000 Bacteria 1TP4S@1239,3F47F@33958,4H9MF@91061,COG1012@1,COG1012@2 NA|NA|NA C Belongs to the aldehyde dehydrogenase family HOOMBAJD_01620 568703.LGG_02287 2.7e-94 351.3 Lactobacillaceae yqaB Bacteria 1VEFC@1239,3F8WP@33958,4HQJP@91061,COG3981@1,COG3981@2 NA|NA|NA S Acetyltransferase (GNAT) domain HOOMBAJD_01621 568703.LGG_02288 1.3e-122 445.7 Lactobacillaceae rplA GO:0000027,GO:0000470,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006417,GO:0006446,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015934,GO:0016020,GO:0016043,GO:0016070,GO:0016072,GO:0017148,GO:0019222,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0030312,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045947,GO:0046483,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065003,GO:0065007,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0080090,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904,GO:2000112,GO:2000113 ko:K02863 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1TPTS@1239,3F3VQ@33958,4HAK4@91061,COG0081@1,COG0081@2 NA|NA|NA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release HOOMBAJD_01622 1423732.BALS01000030_gene86 4.8e-70 270.4 Lactobacillaceae rplK GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0006950,GO:0006996,GO:0007154,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009267,GO:0009605,GO:0009987,GO:0009991,GO:0010467,GO:0015934,GO:0015968,GO:0016043,GO:0019538,GO:0019843,GO:0022411,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0030312,GO:0031667,GO:0031668,GO:0031669,GO:0032984,GO:0032991,GO:0033554,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0042594,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050896,GO:0051716,GO:0065003,GO:0070925,GO:0071496,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02867 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1V1BS@1239,3F64I@33958,4HFQ0@91061,COG0080@1,COG0080@2 NA|NA|NA J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors HOOMBAJD_01623 568703.LGG_02290 0.0 1691.4 Lactobacillaceae mgtA GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008324,GO:0015075,GO:0015318,GO:0015399,GO:0015405,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0031224,GO:0031226,GO:0034220,GO:0042623,GO:0042625,GO:0042626,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043492,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0090662,GO:0098655,GO:0098660,GO:0099131,GO:0099132 3.6.3.2 ko:K01531 ko00000,ko01000 3.A.3.4 iSF_1195.SF4248 Bacteria 1TPF5@1239,3F4E0@33958,4HBQJ@91061,COG0474@1,COG0474@2 NA|NA|NA P COG0474 Cation transport ATPase HOOMBAJD_01624 568703.LGG_02292 2.1e-266 924.5 Lactobacillaceae nylA 3.5.1.4 ko:K01426 ko00330,ko00360,ko00380,ko00627,ko00643,ko01120,map00330,map00360,map00380,map00627,map00643,map01120 R02540,R03096,R03180,R03909,R05551,R05590 RC00010,RC00100,RC00950,RC01025 ko00000,ko00001,ko01000 Bacteria 1TPGJ@1239,3F4UM@33958,4HBE7@91061,COG0154@1,COG0154@2 NA|NA|NA J Belongs to the amidase family HOOMBAJD_01625 568703.LGG_02293 2.4e-90 338.2 Lactobacillaceae yvqK GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005525,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009235,GO:0009236,GO:0009987,GO:0016043,GO:0016740,GO:0016765,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019003,GO:0019438,GO:0019538,GO:0022607,GO:0030091,GO:0030554,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032559,GO:0032561,GO:0033013,GO:0033014,GO:0034641,GO:0035639,GO:0036094,GO:0042364,GO:0043167,GO:0043168,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0051186,GO:0051188,GO:0051259,GO:0051260,GO:0065003,GO:0070206,GO:0070207,GO:0071704,GO:0071840,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 1.2.1.88,1.5.5.2,2.5.1.17 ko:K00798,ko:K13821 ko00250,ko00330,ko00860,ko01100,ko01110,ko01130,map00250,map00330,map00860,map01100,map01110,map01130 M00122 R00245,R00707,R00708,R01253,R01492,R04444,R04445,R05051,R05220,R07268 RC00080,RC00083,RC00216,RC00242,RC00255,RC00533 ko00000,ko00001,ko00002,ko01000,ko03000 Bacteria 1V3PI@1239,3FBQY@33958,4IS1C@91061,COG2096@1,COG2096@2 NA|NA|NA S Cobalamin adenosyltransferase HOOMBAJD_01626 568703.LGG_02294 6.1e-86 323.6 Lactobacillaceae ko:K16924,ko:K16927 M00582 ko00000,ko00002,ko02000 3.A.1.29,3.A.1.32 Bacteria 1V5GD@1239,3F5H7@33958,4HI8Y@91061,COG4720@1,COG4720@2 NA|NA|NA S ECF transporter, substrate-specific component HOOMBAJD_01627 568703.LGG_02295 3.1e-63 247.7 Lactobacillaceae Bacteria 1VF26@1239,2DNM7@1,32Y2X@2,3F6AM@33958,4HP82@91061 NA|NA|NA S Domain of unknown function (DUF4430) HOOMBAJD_01628 568703.LGG_02296 0.0 1530.0 Lactobacillaceae rtpR 1.1.98.6,1.17.4.1,1.17.4.2 ko:K00525,ko:K00527,ko:K21636 ko00230,ko00240,ko01100,map00230,map00240,map01100 M00053 R02014,R02017,R02018,R02019,R02020,R02022,R02023,R02024,R04315,R11633,R11634,R11635,R11636 RC00013,RC00613 ko00000,ko00001,ko00002,ko01000,ko03400 Bacteria 1TT3U@1239,3F3VU@33958,4HFF1@91061,COG0209@1,COG0209@2 NA|NA|NA F ribonucleoside-triphosphate reductase activity HOOMBAJD_01629 568703.LGG_02297 5.9e-79 300.1 Lactobacillaceae Bacteria 1VETR@1239,3F6C3@33958,4HNTN@91061,COG3613@1,COG3613@2 NA|NA|NA F nucleoside 2-deoxyribosyltransferase HOOMBAJD_01630 568703.LGG_02298 2.9e-159 567.8 Lactobacillaceae Bacteria 1V910@1239,3F4RX@33958,4HF90@91061,COG4814@1,COG4814@2 NA|NA|NA S Alpha/beta hydrolase of unknown function (DUF915) HOOMBAJD_01631 568703.LGG_02299 1.5e-100 372.1 Lactobacillaceae nusG GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:1903506,GO:2000112,GO:2001141 ko:K02601 ko00000,ko03009,ko03021 Bacteria 1TR3P@1239,3F55W@33958,4HAJA@91061,COG0250@1,COG0250@2 NA|NA|NA K Participates in transcription elongation, termination and antitermination HOOMBAJD_01632 568703.LGG_02300 1.5e-22 111.3 Lactobacillaceae secE GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0008150,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0040007,GO:0044425,GO:0044459,GO:0044464,GO:0071944 ko:K03073 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 ko00000,ko00001,ko00002,ko02044 3.A.5.1,3.A.5.2 Bacteria 1VK48@1239,3F86Y@33958,4HR1W@91061,COG0690@1,COG0690@2 NA|NA|NA U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation HOOMBAJD_01633 568703.LGG_02301 8.5e-22 108.6 Lactobacillaceae rpmG ko:K02913 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1VFTQ@1239,3F83F@33958,4HR5Q@91061,COG0267@1,COG0267@2 NA|NA|NA J Belongs to the bacterial ribosomal protein bL33 family HOOMBAJD_01634 568703.LGG_02302 3.2e-170 604.4 Lactobacillaceae menA 2.5.1.74 ko:K02548 ko00130,ko01100,ko01110,map00130,map01100,map01110 M00116 R05617,R06858,R10757 RC02935,RC02936,RC03264 ko00000,ko00001,ko00002,ko01000,ko01006 Bacteria 1TSZV@1239,3F3JM@33958,4HA68@91061,COG1575@1,COG1575@2 NA|NA|NA H 1,4-dihydroxy-2-naphthoate HOOMBAJD_01635 568703.LGG_02303 1.1e-164 585.9 Lactobacillaceae menA 2.5.1.74 ko:K02548 ko00130,ko01100,ko01110,map00130,map01100,map01110 M00116 R05617,R06858,R10757 RC02935,RC02936,RC03264 ko00000,ko00001,ko00002,ko01000,ko01006 Bacteria 1TSZV@1239,3F6SN@33958,4HA68@91061,COG1575@1,COG1575@2 NA|NA|NA M UbiA prenyltransferase family HOOMBAJD_01637 568703.LGG_02304 5.4e-195 686.8 Lactobacillaceae apbE 2.7.1.180 ko:K03734 ko00000,ko01000 Bacteria 1TR9C@1239,3FB4B@33958,4HA6Y@91061,COG1477@1,COG1477@2 NA|NA|NA H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein HOOMBAJD_01638 568703.LGG_00339 2.5e-90 338.2 Lactobacillaceae manZ_1 ko:K02796 ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060 M00276 R02630 RC00017,RC03206 ko00000,ko00001,ko00002,ko02000 4.A.6.1 Bacteria 1UMKU@1239,3F434@33958,4HC75@91061,COG3716@1,COG3716@2 NA|NA|NA G PTS system mannose/fructose/sorbose family IID component HOOMBAJD_01639 568703.LGG_00340 7.8e-64 249.6 Lactobacillaceae XK27_08465 2.7.1.191 ko:K02793 ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060 M00276 R02630 RC00017,RC03206 ko00000,ko00001,ko00002,ko01000,ko02000 4.A.6.1 Bacteria 1VB8U@1239,3F7YU@33958,4HKV5@91061,COG2893@1,COG2893@2 NA|NA|NA G PTS system fructose IIA component HOOMBAJD_01640 568703.LGG_00341 3.4e-146 524.2 Lactobacillaceae lacC 2.7.1.11,2.7.1.144,2.7.1.56 ko:K00882,ko:K00917,ko:K16370 ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130,map01200,map01230 M00001,M00345 R00756,R02071,R03236,R03237,R03238,R03239,R04779 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 Bacteria 1TR9H@1239,3F9HC@33958,4HAGR@91061,COG1105@1,COG1105@2 NA|NA|NA F pfkB family carbohydrate kinase HOOMBAJD_01641 568703.LGG_00342 1.1e-147 529.3 Lactobacillaceae Bacteria 1TP2V@1239,3F63S@33958,4HCAG@91061,COG1028@1,COG1028@2 NA|NA|NA IQ KR domain HOOMBAJD_01642 568703.LGG_00343 6.1e-244 849.7 Lactobacillaceae gatC GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008150,GO:0008643,GO:0009401,GO:0015144,GO:0015791,GO:0015796,GO:0015850,GO:0016020,GO:0016740,GO:0016772,GO:0016773,GO:0022804,GO:0022857,GO:0034219,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:0090563,GO:0090584 ko:K02775 ko00052,ko01100,ko02060,map00052,map01100,map02060 M00279 R05570 RC00017,RC03206 ko00000,ko00001,ko00002,ko02000 4.A.5.1 iEcolC_1368.EcolC_1555,iYL1228.KPN_03550 Bacteria 1TQ10@1239,3F427@33958,4HA1Q@91061,COG3775@1,COG3775@2 NA|NA|NA G PTS system sugar-specific permease component HOOMBAJD_01643 568703.LGG_00345 1.1e-86 325.9 Lactobacillaceae 2.7.1.194,2.7.1.200,2.7.1.202 ko:K02768,ko:K02769,ko:K02770,ko:K02773,ko:K02806,ko:K02821,ko:K03491 ko00051,ko00052,ko00053,ko01100,ko01120,ko02060,map00051,map00052,map00053,map01100,map01120,map02060 M00273,M00279,M00283,M00550 R03232,R05570,R07671 RC00017,RC03206 ko00000,ko00001,ko00002,ko01000,ko02000,ko03000 4.A.2.1,4.A.5.1,4.A.7.1 Bacteria 1VAHC@1239,3F7MI@33958,4HIAB@91061,COG1762@1,COG1762@2 NA|NA|NA G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HOOMBAJD_01644 568703.LGG_00346 1.5e-46 191.8 Lactobacillaceae 2.7.1.194,2.7.1.200 ko:K02774,ko:K02822 ko00052,ko00053,ko01100,ko01120,ko02060,map00052,map00053,map01100,map01120,map02060 M00279,M00283,M00550 R05570,R07671 RC00017,RC03206 ko00000,ko00001,ko00002,ko01000,ko02000 4.A.5.1,4.A.7.1 Bacteria 1VH42@1239,3F7GA@33958,4IR9Z@91061,COG3414@1,COG3414@2 NA|NA|NA G PTS system, Lactose/Cellobiose specific IIB subunit HOOMBAJD_01645 568703.LGG_00347 1.7e-162 578.6 Lactobacillaceae Bacteria 1VN32@1239,2ESMM@1,33K66@2,3F9GP@33958,4I1KV@91061 NA|NA|NA HOOMBAJD_01647 568703.LGG_00348 1.6e-293 1014.6 Lactobacillaceae 2.4.1.52 ko:K00712 ko00000,ko01000,ko01003 GT4 Bacteria 1UY71@1239,3FC1Q@33958,4HFBM@91061,COG0438@1,COG0438@2 NA|NA|NA M Glycosyl transferases group 1 HOOMBAJD_01648 568703.LGG_00349 0.0 1098.2 Lactobacillaceae 2.4.1.52 ko:K00712 ko00000,ko01000,ko01003 GT4 Bacteria 1TR6K@1239,3F4P6@33958,4HGDG@91061,COG0438@1,COG0438@2 NA|NA|NA M An N-acetylglucosaminyl transferase that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon HOOMBAJD_01649 568703.LGG_00350 1.1e-205 722.6 Lactobacillaceae Bacteria 1VJ1K@1239,2E865@1,332JJ@2,3F662@33958,4IFBU@91061 NA|NA|NA S Uncharacterized protein conserved in bacteria (DUF2325) HOOMBAJD_01650 568703.LGG_00351 1.2e-230 805.4 Lactobacillaceae 4.4.1.8 ko:K00842,ko:K14155 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 R00782,R01286,R02408,R04941 RC00056,RC00069,RC00382,RC00488,RC00710,RC01245,RC02303 ko00000,ko00001,ko01000,ko01007 Bacteria 1TP5G@1239,3F4JX@33958,4H9PE@91061,COG1168@1,COG1168@2 NA|NA|NA E Aminotransferase, class I HOOMBAJD_01651 568703.LGG_00352 2.5e-200 704.5 Lactobacillaceae pepP 3.4.11.9,3.4.13.9 ko:K01262,ko:K01271 ko00000,ko01000,ko01002 Bacteria 1TQ44@1239,3F9GC@33958,4HV4S@91061,COG0006@1,COG0006@2 NA|NA|NA E Creatinase/Prolidase N-terminal domain HOOMBAJD_01652 568703.LGG_00353 1e-251 875.5 Lactobacillaceae 2.7.1.207 ko:K02761,ko:K02787,ko:K02788 ko00052,ko00500,ko01100,ko02060,map00052,map00500,map01100,map02060 M00275,M00281 R04393,R11170,R11172 RC00017,RC03206 ko00000,ko00001,ko00002,ko01000,ko02000 4.A.3.1,4.A.3.2 Bacteria 1TP8D@1239,3FC71@33958,4HEGS@91061,COG1455@1,COG1455@2 NA|NA|NA U The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane HOOMBAJD_01653 568703.LGG_00354 1.8e-59 235.0 Lactobacillaceae 2.7.1.196,2.7.1.205 ko:K02760 ko00500,ko02060,map00500,map02060 M00275 R11170,R11172 RC00017,RC03206 ko00000,ko00001,ko00002,ko01000,ko02000 4.A.3.2 Bacteria 1V6UA@1239,3F8G8@33958,4HK0J@91061,COG1440@1,COG1440@2 NA|NA|NA G PTS system, Lactose/Cellobiose specific IIB subunit HOOMBAJD_01654 568703.LGG_00355 9.5e-47 192.6 Lactobacillaceae 2.7.1.196,2.7.1.205 ko:K02759 ko00500,ko02060,map00500,map02060 M00275 R11170,R11172 RC00017,RC03206 ko00000,ko00001,ko00002,ko01000,ko02000 4.A.3.2 Bacteria 1VCDD@1239,3F7P9@33958,4HZCJ@91061,COG1447@1,COG1447@2 NA|NA|NA G PTS system, Lactose/Cellobiose specific IIA subunit HOOMBAJD_01655 568703.LGG_00356 2.2e-193 681.4 Lactobacillaceae ypdE GO:0003674,GO:0003824,GO:0004177,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0008238,GO:0016787,GO:0019538,GO:0043170,GO:0044238,GO:0070011,GO:0071704,GO:0140096,GO:1901564 Bacteria 1TNZT@1239,3F55I@33958,4H9SM@91061,COG1363@1,COG1363@2 NA|NA|NA E M42 glutamyl aminopeptidase HOOMBAJD_01656 568703.LGG_00357 0.0 1097.0 Lactobacillaceae 2.7.1.194,2.7.1.200,2.7.1.202 ko:K02768,ko:K02769,ko:K02770,ko:K02773,ko:K02806,ko:K02821,ko:K03491 ko00051,ko00052,ko00053,ko01100,ko01120,ko02060,map00051,map00052,map00053,map01100,map01120,map02060 M00273,M00279,M00283,M00550 R03232,R05570,R07671 RC00017,RC03206 ko00000,ko00001,ko00002,ko01000,ko02000,ko03000 4.A.2.1,4.A.5.1,4.A.7.1 Bacteria 1TS2U@1239,3F6RZ@33958,4HTK5@91061,COG1762@1,COG1762@2,COG3711@1,COG3711@2 NA|NA|NA GKT Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HOOMBAJD_01657 568703.LGG_00358 2.8e-235 820.8 Lactobacillaceae 3.4.11.4 ko:K01258 ko00000,ko01000,ko01002 Bacteria 1TP3A@1239,3F45V@33958,4HAZE@91061,COG2195@1,COG2195@2 NA|NA|NA E Cleaves the N-terminal amino acid of tripeptides HOOMBAJD_01658 568703.LGG_00359 1.1e-292 1011.9 Lactobacillaceae ko:K02035,ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 M00239,M00439 ko00000,ko00001,ko00002,ko02000 3.A.1.5,3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25 Bacteria 1TNYQ@1239,3F3JE@33958,4HAMK@91061,COG4166@1,COG4166@2 NA|NA|NA E ABC transporter, substratebinding protein HOOMBAJD_01659 568703.LGG_00360 2.2e-119 434.9 Lactobacillaceae ko:K06889 ko00000 Bacteria 1V3PW@1239,3F7G3@33958,4HGZK@91061,COG3153@1,COG3153@2 NA|NA|NA S Acetyltransferase (GNAT) family HOOMBAJD_01660 568703.LGG_02282 3.3e-25 122.9 Lactobacillaceae Bacteria 1W5A1@1239,2DE74@1,2ZKT0@2,3F4Z4@33958,4I0IZ@91061 NA|NA|NA HOOMBAJD_01661 568703.LGG_02281 5e-221 773.5 Lactobacillaceae yceI ko:K08369 ko00000,ko02000 2.A.1 Bacteria 1UHSG@1239,3FBXF@33958,4IS86@91061,COG2271@1,COG2271@2 NA|NA|NA G Sugar (and other) transporter HOOMBAJD_01662 568703.LGG_02280 6.8e-90 336.7 Lactobacillaceae Bacteria 1U7BG@1239,29Q17@1,30AZR@2,3F99Z@33958,4IH6H@91061 NA|NA|NA HOOMBAJD_01663 568703.LGG_02279 6.9e-150 536.6 Lactobacillaceae Bacteria 1V42X@1239,3F6TI@33958,4HI1M@91061,COG0454@1,COG0456@2 NA|NA|NA K acetyltransferase HOOMBAJD_01664 568703.LGG_02278 2.2e-224 784.6 Lactobacillaceae mdtG GO:0006810,GO:0006855,GO:0008150,GO:0015893,GO:0042221,GO:0042493,GO:0050896,GO:0051179,GO:0051234,GO:0055085 ko:K08161 ko00000,ko02000 2.A.1.2.20 Bacteria 1TRDJ@1239,3F3T5@33958,4H9Q9@91061,COG0477@1,COG2814@2 NA|NA|NA EGP Major facilitator Superfamily HOOMBAJD_01665 568703.LGG_02277 7.7e-83 313.2 Lactobacillaceae rplJ GO:0003674,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006417,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015934,GO:0016020,GO:0017148,GO:0019222,GO:0019538,GO:0022625,GO:0022626,GO:0030312,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0034641,GO:0034645,GO:0040007,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044877,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0071704,GO:0071944,GO:0080090,GO:1901564,GO:1901566,GO:1901576,GO:1990904,GO:2000112,GO:2000113 ko:K02864,ko:K02935 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1V3JJ@1239,3F4S4@33958,4HH0N@91061,COG0244@1,COG0244@2 NA|NA|NA J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors HOOMBAJD_01666 1423816.BACQ01000053_gene2056 3.8e-55 220.7 Lactobacillaceae rplL ko:K02935 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1V6EI@1239,3F6YA@33958,4HIGQ@91061,COG0222@1,COG0222@2 NA|NA|NA J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation HOOMBAJD_01667 568703.LGG_02275 1.7e-154 552.0 Lactobacillaceae prsA 5.2.1.8 ko:K02597,ko:K07533 ko00000,ko01000,ko03110 Bacteria 1VT0K@1239,3F4RW@33958,4I4BP@91061,COG0760@1,COG0760@2 NA|NA|NA M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins HOOMBAJD_01668 568703.LGG_02274 0.0 3339.7 Lactobacillaceae prtS 3.4.21.110,3.4.21.96 ko:K01361,ko:K08652,ko:K17734 ko00000,ko01000,ko01002,ko03110 Bacteria 1TPH1@1239,3F3M5@33958,4HBQH@91061,COG1404@1,COG1404@2 NA|NA|NA O Belongs to the peptidase S8 family HOOMBAJD_01669 568703.LGG_02273 3.3e-172 610.9 Lactobacillaceae ccpB 5.1.1.1 ko:K01775,ko:K05499 ko00473,ko01100,ko01502,map00473,map01100,map01502 R00401 RC00285 ko00000,ko00001,ko01000,ko01011,ko03000 Bacteria 1TQSQ@1239,3F4YI@33958,4HBNR@91061,COG1609@1,COG1609@2 NA|NA|NA K lacI family HOOMBAJD_01670 568703.LGG_02272 8.2e-67 259.6 Lactobacillaceae Bacteria 1U7NB@1239,2BJY6@1,32EAT@2,3F9XZ@33958,4IHJK@91061 NA|NA|NA HOOMBAJD_01671 568703.LGG_00831 6.9e-80 303.1 Lactobacillaceae perR GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0032991,GO:0032993,GO:0043565,GO:0044212,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1990837,GO:2000112,GO:2000113,GO:2001141 ko:K03711,ko:K09825 ko00000,ko03000 Bacteria 1V400@1239,3F67J@33958,4HHF8@91061,COG0735@1,COG0735@2 NA|NA|NA P Belongs to the Fur family HOOMBAJD_01672 568703.LGG_00830 0.0 1297.3 Lactobacillaceae ltaS GO:0005575,GO:0005576 2.7.8.20 ko:K01138,ko:K19005 ko00561,ko01100,map00561,map01100 R05081,R10849 RC00017 ko00000,ko00001,ko01000 Bacteria 1TRMA@1239,3F3R7@33958,4H9S0@91061,COG1368@1,COG1368@2 NA|NA|NA M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily HOOMBAJD_01673 568703.LGG_00829 5.1e-44 183.3 Lactobacillaceae ykuJ Bacteria 1VKD0@1239,3F82V@33958,4HRGC@91061,COG4703@1,COG4703@2 NA|NA|NA S Protein of unknown function (DUF1797) HOOMBAJD_01674 568703.LGG_00828 1.2e-219 768.8 Lactobacillaceae patA 2.6.1.1 ko:K00812,ko:K00841,ko:K10907 ko00220,ko00250,ko00270,ko00300,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00300,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230 M00525 R00355,R00694,R00734,R00896,R02433,R02619,R04467,R05052 RC00006 ko00000,ko00001,ko00002,ko01000,ko01007 Bacteria 1TP0J@1239,3F3MX@33958,4HA13@91061,COG0436@1,COG0436@2 NA|NA|NA E Aminotransferase HOOMBAJD_01675 568703.LGG_00827 6.5e-166 590.1 Lactobacillaceae mprF ko:K07027 ko00000,ko02000 4.D.2 Bacteria 1UY7Z@1239,3F3UR@33958,4HCG6@91061,COG0392@1,COG0392@2 NA|NA|NA I Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms HOOMBAJD_01676 568703.LGG_00826 1e-195 689.1 Lactobacillaceae cpoA GO:0003674,GO:0003824,GO:0006629,GO:0006643,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016740,GO:0016757,GO:0016758,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0046467,GO:0071704,GO:1901576 ko:K13678 R10865 RC00005,RC00049 ko00000,ko01000,ko01003 GT4 Bacteria 1TPSS@1239,3F47X@33958,4HB9F@91061,COG0438@1,COG0438@2 NA|NA|NA M Glycosyltransferase, group 1 family protein HOOMBAJD_01677 568703.LGG_00825 1.5e-230 805.1 Lactobacillaceae mgs GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006629,GO:0006643,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016740,GO:0016757,GO:0016758,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0046467,GO:0046872,GO:0071704,GO:1901576 2.4.1.337 ko:K19002 ko00561,ko01100,map00561,map01100 R10850 RC00005,RC00059 ko00000,ko00001,ko01000,ko01003 GT4 Bacteria 1TPTA@1239,3F4H5@33958,4HA41@91061,COG0438@1,COG0438@2 NA|NA|NA M Glycosyltransferase, group 1 family protein HOOMBAJD_01678 568703.LGG_00824 1.2e-296 1025.0 Lactobacillaceae ybeC Bacteria 1TPJH@1239,3F4AR@33958,4HC13@91061,COG0531@1,COG0531@2 NA|NA|NA E amino acid HOOMBAJD_01679 568703.LGG_00823 1.3e-93 349.0 Lactobacillaceae sigH ko:K03088,ko:K03091,ko:K12296 ko02020,ko02024,map02020,map02024 ko00000,ko00001,ko03000,ko03021 Bacteria 1TP55@1239,3FBRS@33958,4HAHR@91061,COG1595@1,COG1595@2 NA|NA|NA K Sigma-70 region 2 HOOMBAJD_01709 568703.LGG_01999 8.9e-164 582.8 Lactobacillaceae rfbA GO:0000271,GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005975,GO:0005976,GO:0005996,GO:0006006,GO:0006139,GO:0006220,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008879,GO:0009058,GO:0009059,GO:0009117,GO:0009141,GO:0009147,GO:0009200,GO:0009211,GO:0009219,GO:0009225,GO:0009226,GO:0009262,GO:0009394,GO:0009987,GO:0016020,GO:0016051,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019299,GO:0019300,GO:0019305,GO:0019318,GO:0019319,GO:0019438,GO:0019637,GO:0019692,GO:0030312,GO:0033692,GO:0034637,GO:0034641,GO:0034645,GO:0034654,GO:0040007,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044271,GO:0044281,GO:0044283,GO:0044464,GO:0045226,GO:0046075,GO:0046364,GO:0046379,GO:0046383,GO:0046483,GO:0046872,GO:0055086,GO:0071704,GO:0071944,GO:0072527,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901576 2.7.7.24 ko:K00973 ko00521,ko00523,ko00525,ko01130,map00521,map00523,map00525,map01130 M00793 R02328 RC00002 ko00000,ko00001,ko00002,ko01000 iNJ661.Rv0334 Bacteria 1V301@1239,3F4F8@33958,4H9R0@91061,COG1209@1,COG1209@2 NA|NA|NA H Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis HOOMBAJD_01710 235909.GK3319 9.5e-71 273.5 Geobacillus cpsE Bacteria 1TP7M@1239,1WGHX@129337,4HCBG@91061,COG2148@1,COG2148@2 NA|NA|NA M Bacterial sugar transferase HOOMBAJD_01711 543734.LCABL_22270 4.2e-121 441.0 Lactobacillaceae ko:K07011 ko00000 Bacteria 1VAE1@1239,3F941@33958,4HM9Y@91061,COG1216@1,COG1216@2 NA|NA|NA S Glycosyltransferase like family 2 HOOMBAJD_01712 543734.LCABL_22280 6.1e-226 790.0 Lactobacillaceae cps1C Bacteria 1TP7R@1239,3F48Q@33958,4HC84@91061,COG2244@1,COG2244@2 NA|NA|NA S Membrane protein involved in the export of O-antigen and teichoic acid HOOMBAJD_01713 568703.LGG_00022 1.3e-265 921.8 Lactobacillaceae Bacteria 1TRUS@1239,3F5ZY@33958,4HCCQ@91061,COG3039@1,COG3039@2 NA|NA|NA L Transposase DDE domain HOOMBAJD_01714 543734.LCABL_22300 6.4e-147 527.3 Lactobacillaceae Bacteria 1W1D2@1239,2DY4C@1,3483I@2,3FAUV@33958,4HYAM@91061 NA|NA|NA S O-antigen ligase like membrane protein HOOMBAJD_01715 543734.LCABL_22310 1.8e-112 412.5 Lactobacillaceae Bacteria 1VVRP@1239,3FBSG@33958,4HGSR@91061,COG0463@1,COG0463@2 NA|NA|NA M Glycosyltransferase like family 2 HOOMBAJD_01716 543734.LCABL_22320 3e-170 604.7 Lactobacillaceae wcoF Bacteria 1TR6R@1239,3F7BB@33958,4HEIZ@91061,COG0438@1,COG0438@2 NA|NA|NA M Glycosyl transferases group 1 HOOMBAJD_01717 543734.LCABL_22330 1.4e-191 675.6 Lactobacillaceae rgpAc ko:K12996 ko00000,ko01000,ko01003,ko01005 GT4 Bacteria 1TR0Y@1239,3F5EQ@33958,4IPU2@91061,COG0438@1,COG0438@2 NA|NA|NA M Domain of unknown function (DUF1972) HOOMBAJD_01719 568703.LGG_02052 8.7e-115 419.9 Lactobacillaceae ywqD 2.7.10.1 ko:K08252,ko:K16554 ko05111,map05111 ko00000,ko00001,ko01000,ko02000 8.A.3.1 Bacteria 1TS4R@1239,3F4BM@33958,4HCEN@91061,COG0489@1,COG0489@2 NA|NA|NA D Capsular exopolysaccharide family HOOMBAJD_01720 568703.LGG_02053 4e-138 497.7 Lactobacillaceae epsB Bacteria 1UZCR@1239,3F4M5@33958,4HE26@91061,COG3944@1,COG3944@2 NA|NA|NA M biosynthesis protein HOOMBAJD_01721 568703.LGG_02054 2.8e-131 474.6 Lactobacillaceae Bacteria 1UI5G@1239,3F652@33958,4ISEF@91061,COG2755@1,COG2755@2 NA|NA|NA E lipolytic protein G-D-S-L family HOOMBAJD_01722 568703.LGG_02057 1.1e-81 309.3 Lactobacillaceae ccl GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 Bacteria 1V22G@1239,3F6CG@33958,4HGG2@91061,COG4708@1,COG4708@2 NA|NA|NA S QueT transporter HOOMBAJD_01723 568703.LGG_02058 3.5e-126 457.6 Lactobacillaceae Bacteria 1U8IC@1239,3F4X3@33958,4HC26@91061,COG1028@1,COG1028@2 NA|NA|NA IQ Enoyl-(Acyl carrier protein) reductase HOOMBAJD_01724 568703.LGG_02059 2.4e-36 157.5 Lactobacillaceae XK27_01315 Bacteria 1VFBF@1239,2E68Y@1,330X0@2,3F810@33958,4HP3V@91061 NA|NA|NA S Protein of unknown function (DUF2829) HOOMBAJD_01725 568703.LGG_02060 5e-48 196.8 Lactobacillaceae Bacteria 1V3D7@1239,3F83A@33958,4IGD5@91061,COG1396@1,COG1396@2 NA|NA|NA K Cro/C1-type HTH DNA-binding domain HOOMBAJD_01726 568703.LGG_02061 1.9e-115 421.8 Lactobacillaceae gpm5 3.1.3.3,5.4.2.11 ko:K01834,ko:K22305 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230 M00001,M00002,M00003 R00582,R01518 RC00017,RC00536 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Bacteria 1V6ES@1239,3F4IS@33958,4HGZI@91061,COG0406@1,COG0406@2 NA|NA|NA G Phosphoglycerate mutase family HOOMBAJD_01727 568703.LGG_02062 2.6e-180 637.9 Lactobacillaceae oppF ko:K02032,ko:K10823 ko01501,ko02010,ko02024,map01501,map02010,map02024 M00239,M00439 ko00000,ko00001,ko00002,ko02000 3.A.1.5,3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25 Bacteria 1V36J@1239,3F4GM@33958,4H9YB@91061,COG4608@1,COG4608@2 NA|NA|NA P Belongs to the ABC transporter superfamily HOOMBAJD_01728 568703.LGG_02063 1.9e-197 694.9 Lactobacillaceae oppD ko:K02031,ko:K02032,ko:K15583 ko01501,ko02010,ko02024,map01501,map02010,map02024 M00239,M00439 ko00000,ko00001,ko00002,ko02000 3.A.1.5,3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25 Bacteria 1TP6E@1239,3F41T@33958,4HA4E@91061,COG0444@1,COG0444@2 NA|NA|NA P Belongs to the ABC transporter superfamily HOOMBAJD_01729 568703.LGG_02064 3.1e-176 624.4 Lactobacillaceae oppC ko:K02034,ko:K15582 ko01501,ko02010,ko02024,map01501,map02010,map02024 M00239,M00439 ko00000,ko00001,ko00002,ko02000 3.A.1.5,3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25 Bacteria 1TP4R@1239,3F3W3@33958,4H9PZ@91061,COG1173@1,COG1173@2 NA|NA|NA EP ABC-type dipeptide oligopeptide nickel transport systems, permease components HOOMBAJD_01730 568703.LGG_02065 6.1e-163 580.1 Lactobacillaceae oppB ko:K02033,ko:K15581 ko01501,ko02010,ko02024,map01501,map02010,map02024 M00239,M00439 ko00000,ko00001,ko00002,ko02000 3.A.1.5,3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25 Bacteria 1TP1S@1239,3F42T@33958,4HA2S@91061,COG0601@1,COG0601@2 NA|NA|NA P ABC-type dipeptide oligopeptide nickel transport systems, permease components HOOMBAJD_01731 568703.LGG_02066 1.6e-304 1051.2 Lactobacillaceae oppA ko:K02035,ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 M00239,M00439 ko00000,ko00001,ko00002,ko02000 3.A.1.5,3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25 Bacteria 1TNYQ@1239,3F3JE@33958,4HAMK@91061,COG4166@1,COG4166@2 NA|NA|NA E ABC transporter, substratebinding protein HOOMBAJD_01732 568703.LGG_02067 1.7e-252 878.2 Lactobacillaceae Bacteria 1VSAB@1239,3FCCN@33958,4HECQ@91061,COG0477@1,COG2814@2 NA|NA|NA EGP Major facilitator Superfamily HOOMBAJD_01733 568703.LGG_02068 2.2e-99 368.2 Lactobacillaceae efp GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 ko:K02356 ko00000,ko03012 Bacteria 1TR8P@1239,3F4EW@33958,4H9YX@91061,COG0231@1,COG0231@2 NA|NA|NA J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase HOOMBAJD_01734 568703.LGG_02069 5.2e-130 470.3 Lactobacillaceae yrjD ko:K00782 ko00000 Bacteria 1UZAK@1239,3F4UV@33958,4HH3R@91061,COG1556@1,COG1556@2 NA|NA|NA S LUD domain HOOMBAJD_01735 568703.LGG_02070 3.6e-290 1003.4 Lactobacillaceae lutB ko:K18929 ko00000 iSF_1195.SF0259,iSFxv_1172.SFxv_0274,iS_1188.S0280 Bacteria 1TREQ@1239,3F4IV@33958,4H9UI@91061,COG1139@1,COG1139@2 NA|NA|NA C 4Fe-4S dicluster domain HOOMBAJD_01736 568703.LGG_02071 1.4e-147 528.9 Lactobacillaceae lutA GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 ko:K18928 ko00000 iEC042_1314.EC042_0340,iEcSMS35_1347.EcSMS35_0338 Bacteria 1TPFC@1239,3F4GX@33958,4HAKC@91061,COG0247@1,COG0247@2 NA|NA|NA C Cysteine-rich domain HOOMBAJD_01737 568703.LGG_02073 9.1e-101 372.9 Lactobacillaceae Bacteria 1U7F5@1239,2AYWY@1,30B2F@2,3F9II@33958,4IHB5@91061 NA|NA|NA HOOMBAJD_01738 568703.LGG_02074 2.1e-52 211.5 Lactobacillaceae chbA GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006810,GO:0008150,GO:0008643,GO:0009401,GO:0009987,GO:0015144,GO:0016043,GO:0016740,GO:0016772,GO:0016773,GO:0022607,GO:0022804,GO:0022857,GO:0034219,GO:0043933,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0051179,GO:0051234,GO:0051259,GO:0051260,GO:0055085,GO:0065003,GO:0071702,GO:0071840,GO:0090563,GO:0090566,GO:1901264,GO:1902815 2.7.1.196,2.7.1.205 ko:K02759 ko00500,ko02060,map00500,map02060 M00275 R11170,R11172 RC00017,RC03206 ko00000,ko00001,ko00002,ko01000,ko02000 4.A.3.2 iECABU_c1320.ECABU_c17610,iECOK1_1307.ECOK1_1683,iECUMN_1333.ECUMN_2025,iNRG857_1313.NRG857_07575,iUMN146_1321.UM146_09345 Bacteria 1VEGE@1239,3FA0Y@33958,4HM37@91061,COG1447@1,COG1447@2 NA|NA|NA G PTS system, Lactose/Cellobiose specific IIA subunit HOOMBAJD_01739 568703.LGG_02075 9.4e-211 739.2 Lactobacillaceae ko:K09963 ko00000 Bacteria 1TRIY@1239,3F4FK@33958,4H9V2@91061,COG3589@1,COG3589@2 NA|NA|NA S Bacterial protein of unknown function (DUF871) HOOMBAJD_01740 568703.LGG_02076 3e-69 267.7 Lactobacillaceae Bacteria 1VEZ0@1239,2DQNY@1,337UX@2,3F875@33958,4HPE2@91061 NA|NA|NA S Domain of unknown function (DUF3284) HOOMBAJD_01741 568703.LGG_02078 8.4e-268 929.1 Lactobacillaceae celB GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008150,GO:0016020,GO:0044464,GO:0051179,GO:0051234,GO:0071702,GO:0071944,GO:1901264,GO:1902815 2.7.1.207 ko:K02761,ko:K02787,ko:K02788 ko00052,ko00500,ko01100,ko02060,map00052,map00500,map01100,map02060 M00275,M00281 R04393,R11170,R11172 RC00017,RC03206 ko00000,ko00001,ko00002,ko01000,ko02000 4.A.3.1,4.A.3.2 iECABU_c1320.ECABU_c19930 Bacteria 1TP8D@1239,3F4VG@33958,4H9W2@91061,COG1455@1,COG1455@2 NA|NA|NA G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane HOOMBAJD_01742 568703.LGG_02079 0.0 1513.4 Lactobacillaceae rafA 3.2.1.22 ko:K07407 ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603 R01101,R01103,R01104,R01194,R01329,R02926,R03634,R04019,R04470,R05549,R05961,R06091 RC00049,RC00059,RC00451 ko00000,ko00001,ko01000 Bacteria 1TQF4@1239,3F3RU@33958,4HA5R@91061,COG3345@1,COG3345@2 NA|NA|NA G alpha-galactosidase HOOMBAJD_01743 568703.LGG_02080 2.9e-131 474.6 Lactobacillaceae ko:K09861 ko00000 Bacteria 1TR33@1239,3F4KR@33958,4HFN2@91061,COG3022@1,COG3022@2 NA|NA|NA S Belongs to the UPF0246 family HOOMBAJD_01744 568703.LGG_02081 2.6e-132 478.0 Lactobacillaceae XK27_05520 Bacteria 1TPHH@1239,3F56B@33958,4HCHE@91061,COG3860@1,COG3860@2 NA|NA|NA S Uncharacterized protein conserved in bacteria (DUF2087) HOOMBAJD_01745 568703.LGG_02082 0.0 1682.2 Lactobacillaceae VPA1266 3.1.11.5 ko:K01144,ko:K03581 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Bacteria 1TPZH@1239,3F5WR@33958,4HATQ@91061,COG0507@1,COG0507@2 NA|NA|NA L Helix-hairpin-helix containing domain HOOMBAJD_01746 568703.LGG_02083 1.8e-107 395.2 Lactobacillaceae Bacteria 1U7BQ@1239,2AGPG@1,316X2@2,3F9AE@33958,4IH6V@91061 NA|NA|NA HOOMBAJD_01747 568703.LGG_02085 2e-101 375.2 Lactobacillaceae Bacteria 1U7CC@1239,29Q1U@1,30B0E@2,3F9CG@33958,4IH7Q@91061 NA|NA|NA S WxL domain surface cell wall-binding HOOMBAJD_01748 568703.LGG_02086 1e-145 522.7 Lactobacillaceae frlD GO:0003674,GO:0003824,GO:0005975,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0019200,GO:0044237,GO:0044238,GO:0044262,GO:0046835,GO:0071704 2.7.1.218 ko:K10710 R08124 RC00002,RC00017 ko00000,ko01000 iECs_1301.ECs4224,iETEC_1333.ETEC_3624 Bacteria 1TSST@1239,3F7U3@33958,4HGU3@91061,COG0524@1,COG0524@2 NA|NA|NA G pfkB family carbohydrate kinase HOOMBAJD_01749 568703.LGG_02087 5.7e-286 990.3 Bacilli Bacteria 1TQBV@1239,4HDPI@91061,COG1409@1,COG1409@2,COG4632@1,COG4632@2 NA|NA|NA G Phosphodiester glycosidase HOOMBAJD_01751 568703.LGG_02088 1.2e-288 998.4 Lactobacillaceae apc3 3.5.2.9 ko:K01469 ko00480,map00480 R00251 RC00553 ko00000,ko00001,ko01000 Bacteria 1TQVB@1239,3F4TR@33958,4HB8X@91061,COG0145@1,COG0145@2 NA|NA|NA EQ Hydantoinase/oxoprolinase N-terminal region HOOMBAJD_01752 568703.LGG_02089 6.9e-206 723.0 Lactobacillaceae ko:K09703 ko00000 Bacteria 1TR39@1239,3F5F2@33958,4HC1C@91061,COG3535@1,COG3535@2 NA|NA|NA S Protein of unknown function (DUF917) HOOMBAJD_01753 568703.LGG_02090 3.5e-222 777.3 Bacilli ko:K10974 ko00000,ko02000 2.A.39.1 Bacteria 1TTBN@1239,4HD25@91061,COG1457@1,COG1457@2 NA|NA|NA F Permease for cytosine/purines, uracil, thiamine, allantoin HOOMBAJD_01754 568703.LGG_02091 1.3e-116 426.0 Lactobacillaceae Bacteria 1U7G9@1239,29Q4F@1,30B35@2,3F9KY@33958,4IHCF@91061 NA|NA|NA HOOMBAJD_01755 904293.HMPREF9176_1736 3.4e-65 255.8 Bacilli hsdS 3.1.21.3 ko:K01154 ko00000,ko01000,ko02048 Bacteria 1TPHR@1239,4HFEJ@91061,COG0732@1,COG0732@2 NA|NA|NA V Type I restriction modification DNA specificity domain HOOMBAJD_01756 543734.LCABL_22720 2e-166 591.7 Lactobacillaceae Bacteria 1TPE1@1239,3FC9T@33958,4HDHJ@91061,COG0582@1,COG0582@2 NA|NA|NA L Belongs to the 'phage' integrase family HOOMBAJD_01757 1410633.JHWR01000006_gene1091 2.7e-54 219.5 unclassified Lachnospiraceae 3.1.21.3 ko:K01154 ko00000,ko01000,ko02048 Bacteria 1TP5N@1239,24DRR@186801,27NA4@186928,COG0732@1,COG0732@2 NA|NA|NA V Type I restriction modification DNA specificity domain HOOMBAJD_01758 1267003.KB911374_gene820 1.9e-215 755.4 Lactobacillaceae hsdM 2.1.1.72 ko:K03427 ko00000,ko01000,ko02048 Bacteria 1TPGZ@1239,3F4HM@33958,4HA1J@91061,COG0286@1,COG0286@2 NA|NA|NA V type I restriction-modification system HOOMBAJD_01759 349123.Lreu23DRAFT_3224 0.0 1268.4 Lactobacillaceae hsdR 3.1.21.3 ko:K01153 ko00000,ko01000,ko02048 Bacteria 1TP7S@1239,3F50Q@33958,4HB5A@91061,COG0610@1,COG0610@2 NA|NA|NA V Subunit R is required for both nuclease and ATPase activities, but not for modification HOOMBAJD_01760 568703.LGG_02101 7e-212 743.0 Lactobacillaceae ykiI Bacteria 1VRUF@1239,2DSXT@1,32UTZ@2,3FB9G@33958,4HTM0@91061 NA|NA|NA HOOMBAJD_01761 568703.LGG_02102 0.0 1209.1 Lactobacillaceae pip ko:K01421 ko00000 Bacteria 1TQ15@1239,3F3Y3@33958,4H9T9@91061,COG1511@1,COG1511@2 NA|NA|NA V domain protein HOOMBAJD_01762 1423732.BALS01000016_gene1697 0.0 1161.0 Lactobacillaceae scrA 2.7.1.211 ko:K02808,ko:K02809,ko:K02810 ko00500,ko02060,map00500,map02060 M00269 R00811 RC00017,RC03206 ko00000,ko00001,ko00002,ko01000,ko02000 4.A.1.2.1,4.A.1.2.10,4.A.1.2.12,4.A.1.2.9 Bacteria 1TP5X@1239,3F458@33958,4HA0I@91061,COG1263@1,COG1263@2,COG1264@1,COG1264@2,COG2190@1,COG2190@2 NA|NA|NA G phosphotransferase system HOOMBAJD_01763 568703.LGG_02105 0.0 1152.1 Lactobacillaceae malA 3.2.1.10,3.2.1.20 ko:K01182,ko:K01187 ko00052,ko00500,ko01100,map00052,map00500,map01100 R00028,R00801,R00802,R01718,R01791,R06087,R06088,R06199 RC00028,RC00049,RC00059,RC00077,RC00451 ko00000,ko00001,ko01000 GH13,GH31 Bacteria 1TP53@1239,3F41I@33958,4HA1G@91061,COG0366@1,COG0366@2 NA|NA|NA G Alpha amylase, catalytic domain protein HOOMBAJD_01764 568703.LGG_02106 1.5e-175 622.1 Lactobacillaceae 5.1.1.1 ko:K01775,ko:K02529,ko:K05499 ko00473,ko01100,ko01502,map00473,map01100,map01502 R00401 RC00285 ko00000,ko00001,ko01000,ko01011,ko03000 Bacteria 1TRHK@1239,3F5FI@33958,4HB9P@91061,COG1609@1,COG1609@2 NA|NA|NA K Periplasmic binding proteins and sugar binding domain of LacI family HOOMBAJD_01765 568703.LGG_02107 3e-297 1026.9 Lactobacillaceae scrB 3.2.1.26 ko:K01193 ko00052,ko00500,ko01100,map00052,map00500,map01100 R00801,R00802,R02410,R03635,R03921,R06088 RC00028,RC00077 ko00000,ko00001,ko01000 GH32 Bacteria 1TPAE@1239,3F4UD@33958,4H9Y7@91061,COG1621@1,COG1621@2 NA|NA|NA G invertase HOOMBAJD_01767 568703.LGG_02108 7.8e-160 569.7 Lactobacillaceae azoB Bacteria 1UY7W@1239,3F4M7@33958,4HDIS@91061,COG0702@1,COG0702@2 NA|NA|NA GM NmrA-like family HOOMBAJD_01768 568703.LGG_02109 6.5e-234 816.2 Lactobacillaceae cfa 2.1.1.317,2.1.1.79 ko:K00574,ko:K20238 ko00000,ko01000 Bacteria 1TSG4@1239,3F3PA@33958,4HDKI@91061,COG2230@1,COG2230@2 NA|NA|NA M cyclopropane-fatty-acyl-phospholipid synthase HOOMBAJD_01769 568703.LGG_02110 2e-143 515.0 Lactobacillaceae accA 2.1.3.15,6.4.1.2 ko:K01962,ko:K01963 ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212 M00082,M00376 R00742,R04386 RC00040,RC00253,RC00367 ko00000,ko00001,ko00002,ko01000 Bacteria 1UHNS@1239,3F496@33958,4HA4C@91061,COG0825@1,COG0825@2 NA|NA|NA I alpha subunit HOOMBAJD_01770 568703.LGG_02111 5.3e-150 537.0 Lactobacillaceae accD 2.1.3.15,6.4.1.2 ko:K01962,ko:K01963 ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212 M00082,M00376 R00742,R04386 RC00040,RC00253,RC00367 ko00000,ko00001,ko00002,ko01000 Bacteria 1TP4U@1239,3F3T6@33958,4HAI7@91061,COG0777@1,COG0777@2 NA|NA|NA I Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA HOOMBAJD_01771 568703.LGG_02112 3.6e-260 903.7 Lactobacillaceae accC GO:0003674,GO:0003824,GO:0004075,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010565,GO:0016053,GO:0016874,GO:0016879,GO:0019216,GO:0019217,GO:0019222,GO:0019752,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032787,GO:0042304,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045717,GO:0045833,GO:0045922,GO:0046394,GO:0046890,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051055,GO:0062012,GO:0062014,GO:0065007,GO:0071704,GO:0072330,GO:0080090,GO:1901576 6.3.4.14,6.4.1.2 ko:K01961 ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212 M00082,M00376 R00742,R04385 RC00040,RC00253,RC00367 ko00000,ko00001,ko00002,ko01000 iSF_1195.SF3294 Bacteria 1TP16@1239,3F3PT@33958,4HARK@91061,COG0439@1,COG0439@2 NA|NA|NA I Acetyl-CoA carboxylase biotin carboxylase subunit HOOMBAJD_01772 568703.LGG_02113 1.2e-76 292.4 Lactobacillaceae fabZ 3.5.1.108,4.2.1.59 ko:K02372,ko:K16363 ko00061,ko00540,ko00780,ko01100,ko01212,map00061,map00540,map00780,map01100,map01212 M00060,M00083,M00572 R04428,R04535,R04537,R04544,R04568,R04587,R04954,R04965,R07764,R10117,R10121 RC00166,RC00300,RC00831,RC01095 ko00000,ko00001,ko00002,ko01000,ko01004,ko01005 Bacteria 1V6EX@1239,3F5EE@33958,4HGX1@91061,COG0764@1,COG0764@2 NA|NA|NA I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs HOOMBAJD_01773 568703.LGG_02114 1.1e-43 183.0 Lactobacillaceae accB 2.3.1.12,4.1.1.3 ko:K00627,ko:K01571,ko:K02160 ko00010,ko00020,ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00010,map00020,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212 M00082,M00307,M00376 R00209,R00217,R00742,R02569 RC00004,RC00040,RC00367,RC02742,RC02857 br01601,ko00000,ko00001,ko00002,ko01000,ko02000 3.B.1.1.1 Bacteria 1VAB7@1239,3F7M1@33958,4HKCS@91061,COG0511@1,COG0511@2 NA|NA|NA I first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA HOOMBAJD_01774 568703.LGG_02115 2e-222 778.1 Lactobacillaceae fabF 2.3.1.179 ko:K09458 ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212 M00083,M00572 R04355,R04726,R04952,R04957,R04960,R04963,R04968,R07762,R10115,R10119 RC00039,RC02728,RC02729,RC02888 ko00000,ko00001,ko00002,ko01000,ko01004 Bacteria 1TPA7@1239,3F51H@33958,4H9SD@91061,COG0304@1,COG0304@2 NA|NA|NA I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP HOOMBAJD_01775 568703.LGG_02116 2.8e-126 458.0 Lactobacillaceae Bacteria 1TP76@1239,3F4RI@33958,4HAA6@91061,COG1028@1,COG1028@2 NA|NA|NA IQ reductase HOOMBAJD_01776 568703.LGG_02117 8.5e-165 586.3 Lactobacillaceae fabD 2.3.1.39 ko:K00645 ko00061,ko00333,ko01100,ko01130,ko01212,map00061,map00333,map01100,map01130,map01212 M00082 R01626,R11671 RC00004,RC00039,RC02727 ko00000,ko00001,ko00002,ko01000,ko01004 Bacteria 1TPB7@1239,3F3W9@33958,4HBCU@91061,COG0331@1,COG0331@2 NA|NA|NA I Malonyl CoA-acyl carrier protein transacylase HOOMBAJD_01777 568703.LGG_02118 2.6e-172 611.3 Lactobacillaceae fabK 1.3.1.9 ko:K02371 ko00061,ko01100,ko01212,map00061,map01100,map01212 M00083 R04429,R04724,R04955,R04958,R04961,R04966,R04969,R07765 RC00052,RC00076 ko00000,ko00001,ko00002,ko01000,ko01004 iHN637.CLJU_RS20775 Bacteria 1TPC3@1239,3F4PC@33958,4H9T0@91061,COG2070@1,COG2070@2 NA|NA|NA S Nitronate monooxygenase HOOMBAJD_01778 568703.LGG_02119 4.5e-33 146.7 Lactobacillaceae acpP GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 ko:K02078 ko00000,ko00001 Bacteria 1VGIY@1239,3F7ZJ@33958,4HP0V@91061,COG0236@1,COG0236@2 NA|NA|NA IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis HOOMBAJD_01779 568703.LGG_02120 1.8e-173 615.1 Lactobacillaceae fabH 2.3.1.180 ko:K00648 ko00061,ko01100,ko01212,map00061,map01100,map01212 M00082,M00083 R10707 RC00004,RC02729,RC02888 ko00000,ko00001,ko00002,ko01000,ko01004 Bacteria 1TP0K@1239,3F3XP@33958,4HATK@91061,COG0332@1,COG0332@2 NA|NA|NA I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids HOOMBAJD_01780 1423732.BALS01000016_gene1714 2.1e-76 291.6 Lactobacillaceae marR Bacteria 1V6GY@1239,3FC7M@33958,4IR3W@91061,COG1846@1,COG1846@2 NA|NA|NA K Winged helix DNA-binding domain HOOMBAJD_01781 568703.LGG_02122 9e-72 276.2 Lactobacillaceae fabZ 3.5.1.108,4.2.1.59 ko:K02372,ko:K16363 ko00061,ko00540,ko00780,ko01100,ko01212,map00061,map00540,map00780,map01100,map01212 M00060,M00083,M00572 R04428,R04535,R04537,R04544,R04568,R04587,R04954,R04965,R07764,R10117,R10121 RC00166,RC00300,RC00831,RC01095 ko00000,ko00001,ko00002,ko01000,ko01004,ko01005 Bacteria 1V3UN@1239,3F77T@33958,4HHYD@91061,COG0764@1,COG0764@2 NA|NA|NA I FabA-like domain HOOMBAJD_01782 568703.LGG_02123 2.2e-190 671.4 Bacteria Bacteria COG2267@1,COG2267@2 NA|NA|NA I carboxylic ester hydrolase activity HOOMBAJD_01783 568703.LGG_02124 3.5e-227 793.9 Lactobacillaceae bdhA ko:K00100,ko:K19955 ko00650,ko01120,map00650,map01120 R03544,R03545 RC00087 ko00000,ko00001,ko01000 Bacteria 1TPS3@1239,3F4VF@33958,4H9TR@91061,COG1979@1,COG1979@2 NA|NA|NA C Iron-containing alcohol dehydrogenase HOOMBAJD_01784 568703.LGG_02126 7.1e-62 243.0 Lactobacillaceae Bacteria 1VVR4@1239,3FBBI@33958,4HWD0@91061,COG0607@1,COG0607@2 NA|NA|NA P Rhodanese-like domain HOOMBAJD_01785 568703.LGG_02127 5.7e-84 317.0 Lactobacillaceae yetL GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0044212,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2000112,GO:2001141 ko:K15973 ko00000,ko03000 Bacteria 1VK0M@1239,3FBM5@33958,4IR3X@91061,COG1846@1,COG1846@2 NA|NA|NA K helix_turn_helix multiple antibiotic resistance protein HOOMBAJD_01786 1231336.L248_1933 3.5e-80 305.1 Lactobacillaceae 2.7.7.65 ko:K18967 ko00000,ko01000,ko02000 9.B.34.1.1 Bacteria 1UIYT@1239,3F4WX@33958,4ISXH@91061,COG2199@1,COG2199@2 NA|NA|NA T diguanylate cyclase activity HOOMBAJD_01787 1231336.L248_1934 5.3e-202 711.1 Lactobacillaceae ydaN GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K20541 ko00000,ko02000 4.D.3.1.6 Bacteria 1V0RQ@1239,28HGC@1,2Z7S8@2,3F5HU@33958,4HF26@91061 NA|NA|NA S Bacterial cellulose synthase subunit HOOMBAJD_01788 1231336.L248_1935 1.6e-182 645.6 Lactobacillaceae ydaM Bacteria 1TRCI@1239,3FC1R@33958,4HAAK@91061,COG1215@1,COG1215@2 NA|NA|NA M Glycosyl transferase family group 2 HOOMBAJD_01789 1231336.L248_1936 5.8e-81 308.5 Lactobacillaceae Bacteria 1V2SR@1239,3F58K@33958,4HG5T@91061,COG5298@1,COG5298@2 NA|NA|NA S Protein conserved in bacteria HOOMBAJD_01790 1231336.L248_1937 8.6e-74 284.6 Lactobacillaceae Bacteria 1UKIC@1239,28NCT@1,2ZBFR@2,3F5BU@33958,4HF21@91061 NA|NA|NA HOOMBAJD_01791 1122147.AUEH01000034_gene658 2.1e-80 306.2 Lactobacillaceae Bacteria 1V4ZT@1239,3F5GF@33958,4HG8R@91061,COG3405@1,COG3405@2 NA|NA|NA G Belongs to the glycosyl hydrolase 8 (cellulase D) family HOOMBAJD_01792 1231336.L248_0527 5.3e-58 231.9 Lactobacillaceae 2.7.7.65 ko:K18967 ko00000,ko01000,ko02000 9.B.34.1.1 Bacteria 1V5VN@1239,3FBXZ@33958,4HHPQ@91061,COG2199@1,COG3706@2 NA|NA|NA T diguanylate cyclase HOOMBAJD_01793 1423775.BAMN01000001_gene2587 5.7e-162 577.4 Lactobacillaceae nox Bacteria 1TPWW@1239,3F449@33958,4H9U7@91061,COG0446@1,COG0446@2 NA|NA|NA C NADH oxidase HOOMBAJD_01794 913848.AELK01000103_gene836 3.7e-72 278.1 Lactobacillaceae yliE GO:0003674,GO:0003824,GO:0008081,GO:0016787,GO:0016788,GO:0042578,GO:0071111 Bacteria 1V6YK@1239,3F5HI@33958,4HIIM@91061,COG2200@1,COG2200@2 NA|NA|NA T Putative diguanylate phosphodiesterase HOOMBAJD_01795 568703.LGG_02128 4.3e-26 123.2 Lactobacillaceae Bacteria 1U7W4@1239,2AI31@1,318GU@2,3FA8Y@33958,4IHTI@91061 NA|NA|NA HOOMBAJD_01796 568703.LGG_02129 3.7e-67 260.8 Lactobacillaceae ko:K18909 M00705 ko00000,ko00002,ko01504,ko03000 Bacteria 1VMZX@1239,3FBM2@33958,4HMTC@91061,COG1846@1,COG1846@2 NA|NA|NA K MarR family HOOMBAJD_01797 1423734.JCM14202_162 1.2e-10 73.9 Lactobacillaceae Bacteria 1UYJN@1239,3FBEE@33958,4HF8I@91061,COG4640@1,COG4640@2 NA|NA|NA S response to antibiotic HOOMBAJD_01798 568703.LGG_02131 2.6e-159 568.2 Lactobacillaceae Bacteria 1V856@1239,3F5Y5@33958,4HVCY@91061,COG0627@1,COG0627@2 NA|NA|NA S Putative esterase HOOMBAJD_01799 568703.LGG_02132 6.4e-183 646.7 Bacilli Bacteria 1W533@1239,28USJ@1,2ZGWS@2,4I1UJ@91061 NA|NA|NA HOOMBAJD_01800 568703.LGG_02134 3.5e-103 380.9 Lactobacillaceae rmaB Bacteria 1VF51@1239,3F725@33958,4HM7R@91061,COG1846@1,COG1846@2 NA|NA|NA K Transcriptional regulator, MarR family HOOMBAJD_01801 568703.LGG_02136 1.3e-84 318.9 Lactobacillaceae Bacteria 1U7WX@1239,3F4BS@33958,4HHQT@91061,COG1051@1,COG1051@2 NA|NA|NA F NUDIX domain HOOMBAJD_01802 568703.LGG_02138 3.5e-131 474.2 Lactobacillaceae gpmA GO:0001871,GO:0003674,GO:0003824,GO:0004619,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006109,GO:0006139,GO:0006140,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009894,GO:0009986,GO:0009987,GO:0010675,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016866,GO:0016868,GO:0017144,GO:0018130,GO:0019219,GO:0019220,GO:0019222,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0030246,GO:0030247,GO:0031323,GO:0031329,GO:0032787,GO:0034248,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0043455,GO:0043456,GO:0043470,GO:0043471,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046538,GO:0046700,GO:0046939,GO:0050789,GO:0050794,GO:0051171,GO:0051174,GO:0051186,GO:0051188,GO:0051193,GO:0051196,GO:0055086,GO:0060255,GO:0062012,GO:0065007,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0080090,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1902031,GO:2001065 5.4.2.11 ko:K01834 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230 M00001,M00002,M00003 R01518 RC00536 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Bacteria 1TQFP@1239,3F3SK@33958,4HAW7@91061,COG0588@1,COG0588@2 NA|NA|NA G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate HOOMBAJD_01803 568703.LGG_02140 4.4e-125 454.5 Lactobacillaceae Bacteria 1VIMB@1239,3F7Z9@33958,4HP7R@91061,COG4640@1,COG4640@2 NA|NA|NA S zinc-ribbon domain HOOMBAJD_01804 568703.LGG_02141 2e-197 694.9 Lactobacillaceae pbpX1 Bacteria 1V4BS@1239,3F3QN@33958,4HJRT@91061,COG1680@1,COG1680@2 NA|NA|NA V Beta-lactamase HOOMBAJD_01805 568703.LGG_02142 1.5e-181 642.1 Lactobacillaceae Bacteria 1TSBK@1239,3F46E@33958,4HBYJ@91061,COG0628@1,COG0628@2 NA|NA|NA K AI-2E family transporter HOOMBAJD_01806 568703.LGG_02143 1.1e-127 462.6 Lactobacillaceae srtA 3.4.22.70 ko:K07284 ko00000,ko01000,ko01002,ko01011 Bacteria 1V4ZG@1239,3FBG7@33958,4HMUE@91061,COG3764@1,COG3764@2 NA|NA|NA M Sortase family HOOMBAJD_01807 568703.LGG_02144 1.5e-65 255.4 Lactobacillaceae gtcA GO:0000166,GO:0003674,GO:0003824,GO:0003870,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0008883,GO:0009058,GO:0009987,GO:0016020,GO:0016410,GO:0016491,GO:0016620,GO:0016740,GO:0016746,GO:0016747,GO:0016748,GO:0016749,GO:0016903,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0036094,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044464,GO:0046148,GO:0046483,GO:0048037,GO:0050661,GO:0050662,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:0071944,GO:0097159,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 Bacteria 1VESW@1239,3F4GH@33958,4HNK7@91061,COG2246@1,COG2246@2 NA|NA|NA S Teichoic acid glycosylation protein HOOMBAJD_01808 568703.LGG_02145 0.0 1142.5 Lactobacillaceae poxB 1.2.3.3,1.2.5.1 ko:K00156,ko:K00158 ko00620,ko01100,map00620,map01100 R00207,R03145 RC00860,RC02745 ko00000,ko00001,ko01000 Bacteria 1TQE8@1239,3F3R9@33958,4HBUS@91061,COG0028@1,COG0028@2 NA|NA|NA EH Belongs to the TPP enzyme family HOOMBAJD_01809 568703.LGG_02146 1.6e-168 598.6 Lactobacillaceae gbuC ko:K02001,ko:K02002 ko02010,map02010 M00208 ko00000,ko00001,ko00002,ko02000 3.A.1.12 Bacteria 1TP82@1239,3F4B3@33958,4H9MM@91061,COG2113@1,COG2113@2 NA|NA|NA E glycine betaine HOOMBAJD_01810 568703.LGG_02147 8.3e-122 443.4 Lactobacillaceae proW ko:K02001,ko:K02002 ko02010,map02010 M00208 ko00000,ko00001,ko00002,ko02000 3.A.1.12 Bacteria 1UHRI@1239,3F4W7@33958,4IS7D@91061,COG4176@1,COG4176@2 NA|NA|NA E glycine betaine HOOMBAJD_01811 568703.LGG_02148 6.5e-221 773.1 Lactobacillaceae gbuA 3.6.3.32 ko:K02000 ko02010,map02010 M00208 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.12 Bacteria 1UHNE@1239,3FC38@33958,4HA9P@91061,COG4175@1,COG4175@2 NA|NA|NA E glycine betaine HOOMBAJD_01812 568703.LGG_02149 4.4e-132 477.2 Lactobacillaceae sfsA ko:K06206 ko00000 Bacteria 1V1GZ@1239,3F4KV@33958,4HCPN@91061,COG1489@1,COG1489@2 NA|NA|NA S Belongs to the SfsA family HOOMBAJD_01813 568703.LGG_02151 1.6e-66 258.8 Lactobacillaceae usp1 Bacteria 1U62R@1239,3F6W5@33958,4IFRW@91061,COG0589@1,COG0589@2 NA|NA|NA T Universal stress protein family HOOMBAJD_01814 568703.LGG_02152 1.8e-250 871.3 Lactobacillaceae yxbA 6.3.1.12 ko:K17810 ko00000,ko01000 Bacteria 1TQPN@1239,3F3S7@33958,4HAB0@91061,COG3919@1,COG3919@2 NA|NA|NA S ATP-grasp enzyme HOOMBAJD_01815 568703.LGG_02153 3.4e-155 554.3 Lactobacillaceae thrB 2.7.1.39,4.2.3.1 ko:K00872,ko:K01733 ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230 M00018 R01466,R01771,R05086 RC00002,RC00017,RC00526 ko00000,ko00001,ko00002,ko01000 Bacteria 1TRWS@1239,3F44T@33958,4HCQN@91061,COG0083@1,COG0083@2 NA|NA|NA F Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate HOOMBAJD_01816 568703.LGG_02154 1.4e-281 974.9 Lactobacillaceae thrC 4.2.3.1 ko:K01733 ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230 M00018 R01466,R05086 RC00017,RC00526 ko00000,ko00001,ko00002,ko01000 iHN637.CLJU_RS16355,iIT341.HP0098 Bacteria 1TPR0@1239,3F3UF@33958,4H9R7@91061,COG0498@1,COG0498@2 NA|NA|NA E Threonine synthase HOOMBAJD_01817 568703.LGG_02155 1.3e-229 802.0 Lactobacillaceae hom 1.1.1.3 ko:K00003 ko00260,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00270,map00300,map01100,map01110,map01120,map01130,map01230 M00017,M00018 R01773,R01775 RC00087 ko00000,ko00001,ko00002,ko01000 iSB619.SA_RS06610 Bacteria 1TQ2H@1239,3F5BM@33958,4HBAP@91061,COG0460@1,COG0460@2 NA|NA|NA E homoserine dehydrogenase HOOMBAJD_01818 568703.LGG_02156 6.7e-251 872.8 Lactobacillaceae yclM 2.7.2.4 ko:K00928 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 M00016,M00017,M00018,M00033,M00525,M00526,M00527 R00480 RC00002,RC00043 ko00000,ko00001,ko00002,ko01000 Bacteria 1TPQJ@1239,3F48V@33958,4HAEP@91061,COG0527@1,COG0527@2 NA|NA|NA E Belongs to the aspartokinase family HOOMBAJD_01819 568703.LGG_02157 5.8e-166 590.9 Lactobacillaceae yqiK GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0016020,GO:0044424,GO:0044444,GO:0044464,GO:0071944 ko:K03110,ko:K07192,ko:K07487,ko:K15125,ko:K18682 ko02024,ko03018,ko03060,ko03070,ko04910,ko05133,map02024,map03018,map03060,map03070,map04910,map05133 M00335 ko00000,ko00001,ko00002,ko00536,ko01000,ko02044,ko03019,ko03036,ko04131,ko04147 3.A.5.1,3.A.5.2,3.A.5.7 Bacteria 1TQDT@1239,3F5TM@33958,4HA0C@91061,COG2268@1,COG2268@2 NA|NA|NA S SPFH domain / Band 7 family HOOMBAJD_01820 568703.LGG_02158 5.7e-68 263.5 Lactobacillaceae Bacteria 1VQB2@1239,2ESCD@1,33JX6@2,3F9Y6@33958,4HT0C@91061 NA|NA|NA HOOMBAJD_01821 543734.LCABL_23370 1.5e-154 552.4 Lactobacillaceae pfoS ko:K07035 ko00000 Bacteria 1TS5F@1239,3FCB3@33958,4HC4N@91061,COG3641@1,COG3641@2 NA|NA|NA S Phosphotransferase system, EIIC HOOMBAJD_01822 568703.LGG_02163 5.9e-180 636.7 Lactobacillaceae ldhA 1.1.1.28 ko:K03778 ko00620,ko01120,map00620,map01120 R00704 RC00044 ko00000,ko00001,ko01000 Bacteria 1TSZ6@1239,3F4US@33958,4HCIS@91061,COG1052@1,COG1052@2 NA|NA|NA CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family HOOMBAJD_01823 568703.LGG_02164 4.2e-217 760.4 Lactobacillaceae patA 2.6.1.1,2.6.1.57 ko:K00812,ko:K00832,ko:K00841,ko:K10907 ko00220,ko00250,ko00270,ko00300,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00300,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230 M00024,M00025,M00034,M00040,M00525 R00355,R00694,R00734,R00896,R01731,R02433,R02619,R04467,R05052,R07396,R10845 RC00006,RC00036 ko00000,ko00001,ko00002,ko01000,ko01007 Bacteria 1TP0J@1239,3F3MX@33958,4HA13@91061,COG0436@1,COG0436@2 NA|NA|NA E Aminotransferase HOOMBAJD_01824 568703.LGG_02167 6.2e-126 456.8 Lactobacillaceae WQ51_05710 Bacteria 1TPN2@1239,3F4J7@33958,4HHYG@91061,COG2013@1,COG2013@2 NA|NA|NA S Mitochondrial biogenesis AIM24 HOOMBAJD_01825 568703.LGG_02168 6e-143 513.5 Lactobacillaceae Bacteria 1U3PB@1239,3F73K@33958,4HB4W@91061,COG0596@1,COG0596@2 NA|NA|NA S Alpha/beta hydrolase family HOOMBAJD_01826 568703.LGG_02169 2.3e-102 378.3 Lactobacillaceae Bacteria 1VZUX@1239,3F6GF@33958,4HY3K@91061,COG1309@1,COG1309@2 NA|NA|NA K Bacterial regulatory proteins, tetR family HOOMBAJD_01827 568703.LGG_02170 1.2e-171 609.8 Bacilli XK27_06930 ko:K01421 ko00000 Bacteria 1TQ15@1239,4H9T9@91061,COG1511@1,COG1511@2 NA|NA|NA V domain protein HOOMBAJD_01828 568703.LGG_02174 2.1e-171 608.2 Bacilli yeaB Bacteria 1TSGY@1239,4H9WP@91061,COG0053@1,COG0053@2 NA|NA|NA P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family HOOMBAJD_01829 568703.LGG_02175 0.0 1283.1 Lactobacillaceae asnB 6.3.5.4 ko:K01953 ko00250,ko01100,ko01110,map00250,map01100,map01110 R00578 RC00010 ko00000,ko00001,ko01000,ko01002 Bacteria 1TRPB@1239,3F3NT@33958,4HAIP@91061,COG0367@1,COG0367@2 NA|NA|NA E Asparagine synthase HOOMBAJD_01830 568703.LGG_02180 5.2e-206 723.4 Lactobacillaceae Bacteria 1VMH1@1239,2EQYH@1,33II5@2,3F5E7@33958,4HUIK@91061 NA|NA|NA S Calcineurin-like phosphoesterase HOOMBAJD_01831 568703.LGG_02181 1.5e-161 575.5 Lactobacillaceae menA 2.5.1.74 ko:K02548 ko00130,ko01100,ko01110,map00130,map01100,map01110 M00116 R05617,R06858,R10757 RC02935,RC02936,RC03264 ko00000,ko00001,ko00002,ko01000,ko01006 Bacteria 1TSZV@1239,3F3JM@33958,4HA68@91061,COG1575@1,COG1575@2 NA|NA|NA H 1,4-dihydroxy-2-naphthoate HOOMBAJD_01832 568703.LGG_02182 7.3e-175 619.8 Lactobacillaceae hepT 2.5.1.30,2.5.1.90 ko:K00805,ko:K02523 ko00900,ko01110,map00900,map01110 R09247,R09248 RC00279 ko00000,ko00001,ko01000,ko01006 Bacteria 1TR0U@1239,3F4GC@33958,4H9RH@91061,COG0142@1,COG0142@2 NA|NA|NA H Belongs to the FPP GGPP synthase family HOOMBAJD_01833 568703.LGG_02183 1.2e-222 778.9 Lactobacillaceae ackA GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.7.2.1 ko:K00925 ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200 M00357,M00579 R00315,R01353 RC00002,RC00043 ko00000,ko00001,ko00002,ko01000 iNJ661.Rv0409 Bacteria 1TQ22@1239,3F48Z@33958,4HA7K@91061,COG0282@1,COG0282@2 NA|NA|NA F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction HOOMBAJD_01834 568703.LGG_02184 8.8e-167 592.8 Lactobacillaceae natA ko:K01990 M00254 ko00000,ko00002,ko02000 3.A.1 Bacteria 1TR06@1239,3F465@33958,4H9RX@91061,COG4152@1,COG4152@2 NA|NA|NA S ABC transporter HOOMBAJD_01835 568703.LGG_02185 1.6e-209 735.3 Lactobacillaceae ysdA ko:K01992 M00254 ko00000,ko00002,ko02000 3.A.1 Bacteria 1TXRK@1239,3F3KA@33958,4HC9K@91061,COG1668@1,COG1668@2 NA|NA|NA CP ABC-2 family transporter protein HOOMBAJD_01836 568703.LGG_02186 8.1e-64 249.6 Lactobacillaceae ko:K07978,ko:K07979 ko00000,ko03000 Bacteria 1V9ZC@1239,3F78Z@33958,4HKSY@91061,COG1725@1,COG1725@2 NA|NA|NA K helix_turn_helix gluconate operon transcriptional repressor HOOMBAJD_01837 568703.LGG_02187 4.9e-162 577.0 Lactobacillaceae CcmA ko:K01990 M00254 ko00000,ko00002,ko02000 3.A.1 Bacteria 1TPZR@1239,3F4BW@33958,4HB36@91061,COG1131@1,COG1131@2 NA|NA|NA V ABC transporter HOOMBAJD_01838 568703.LGG_02188 5.7e-115 420.2 Lactobacillaceae VPA0052 Bacteria 1UG9X@1239,3F8XZ@33958,4IGYH@91061,COG1835@1,COG1835@2 NA|NA|NA I ABC-2 family transporter protein HOOMBAJD_01839 568703.LGG_02189 5.8e-146 523.5 Lactobacillaceae Bacteria 1TRQC@1239,3F4FH@33958,4HD7P@91061,COG1028@1,COG1028@2 NA|NA|NA IQ reductase HOOMBAJD_01840 1423732.BALS01000018_gene1810 9.3e-259 899.0 Lactobacillaceae bglH 3.2.1.86 ko:K01223 ko00010,ko00500,map00010,map00500 R00839,R05133,R05134 RC00049,RC00171,RC00714 ko00000,ko00001,ko01000 GT1 Bacteria 1TP19@1239,3F3PQ@33958,4HA1W@91061,COG2723@1,COG2723@2 NA|NA|NA G Belongs to the glycosyl hydrolase 1 family HOOMBAJD_01841 568703.LGG_02192 0.0 1142.5 Lactobacillaceae bglP 2.7.1.199,2.7.1.208,2.7.1.211 ko:K02755,ko:K02756,ko:K02757,ko:K02790,ko:K02791,ko:K02808,ko:K02809,ko:K02810 ko00010,ko00500,ko00520,ko02060,map00010,map00500,map00520,map02060 M00266,M00269,M00271 R00811,R02738,R04111 RC00017,RC03206 ko00000,ko00001,ko00002,ko01000,ko02000 4.A.1.1.3,4.A.1.2.1,4.A.1.2.10,4.A.1.2.11,4.A.1.2.12,4.A.1.2.2,4.A.1.2.5,4.A.1.2.6,4.A.1.2.9 Bacteria 1TP5X@1239,3F458@33958,4HA0I@91061,COG1263@1,COG1263@2,COG1264@1,COG1264@2,COG2190@1,COG2190@2 NA|NA|NA G phosphotransferase system HOOMBAJD_01842 568703.LGG_02194 1.7e-159 568.5 Lactobacillaceae licT ko:K02531,ko:K02538,ko:K03488 ko00000,ko03000 Bacteria 1TT5A@1239,3F4SJ@33958,4HC5Y@91061,COG3711@1,COG3711@2 NA|NA|NA K CAT RNA binding domain HOOMBAJD_01843 568703.LGG_02195 3.2e-284 983.8 Lactobacillaceae cydC ko:K06147,ko:K06148 ko00000,ko02000 3.A.1,3.A.1.106,3.A.1.109,3.A.1.21 Bacteria 1UHQP@1239,3F5XV@33958,4HC57@91061,COG1132@1,COG1132@2 NA|NA|NA V ABC transporter transmembrane region HOOMBAJD_01844 568703.LGG_02196 6.1e-310 1069.3 Lactobacillaceae cydD ko:K06148 ko00000,ko02000 3.A.1 Bacteria 1TQ1P@1239,3F4VY@33958,4HCDA@91061,COG4988@1,COG4988@2 NA|NA|NA CO ABC transporter transmembrane region HOOMBAJD_01845 568703.LGG_02197 1.7e-75 288.5 Lactobacillaceae ynhH Bacteria 1VCR8@1239,3FBC0@33958,4HKP0@91061,COG5341@1,COG5341@2 NA|NA|NA S NusG domain II HOOMBAJD_01846 568703.LGG_02198 2.8e-170 604.7 Lactobacillaceae Bacteria 1V2YC@1239,3F6TH@33958,4HFNB@91061,COG3409@1,COG3409@2 NA|NA|NA M Peptidoglycan-binding domain 1 protein HOOMBAJD_01848 568703.LGG_02205 0.0 1138.3 Lactobacillaceae cydD ko:K16012 ko02010,map02010 ko00000,ko00001,ko02000 3.A.1.129 Bacteria 1UHN5@1239,3F4PG@33958,4HAAB@91061,COG4987@1,COG4987@2 NA|NA|NA CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC HOOMBAJD_01849 568703.LGG_02206 0.0 1139.4 Lactobacillaceae cydD GO:0003674,GO:0003824,GO:0005215,GO:0005319,GO:0006810,GO:0006869,GO:0008150,GO:0010876,GO:0015399,GO:0015405,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0033036,GO:0034040,GO:0042623,GO:0042626,GO:0043492,GO:0051179,GO:0051234,GO:0055085,GO:0071702 ko:K16013 ko02010,map02010 ko00000,ko00001,ko02000 3.A.1.129 Bacteria 1TQ1P@1239,3F451@33958,4HAN0@91061,COG4988@1,COG4988@2 NA|NA|NA CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD HOOMBAJD_01850 568703.LGG_02207 6.5e-182 643.3 Lactobacillaceae cydB GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009060,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016491,GO:0016679,GO:0016682,GO:0019646,GO:0020037,GO:0022900,GO:0022904,GO:0031224,GO:0031226,GO:0032991,GO:0044237,GO:0044425,GO:0044459,GO:0044464,GO:0045333,GO:0046906,GO:0048037,GO:0055114,GO:0070069,GO:0071944,GO:0097159,GO:1901363 1.10.3.14 ko:K00426 ko00190,ko01100,ko02020,map00190,map01100,map02020 M00153 R11325 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.4.3 iECABU_c1320.ECABU_c10120,iLF82_1304.LF82_0101,iNRG857_1313.NRG857_04455,iPC815.YPO1118,iYO844.BSU38750,ic_1306.c1120 Bacteria 1TRYV@1239,3F40S@33958,4H9KF@91061,COG1294@1,COG1294@2 NA|NA|NA C Cytochrome d ubiquinol oxidase subunit II HOOMBAJD_01851 568703.LGG_02208 1.8e-278 964.5 Lactobacillaceae cydA GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009060,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016491,GO:0016679,GO:0016682,GO:0019646,GO:0020037,GO:0022900,GO:0022904,GO:0031224,GO:0031226,GO:0032991,GO:0044237,GO:0044425,GO:0044459,GO:0044464,GO:0045333,GO:0046906,GO:0048037,GO:0055114,GO:0070069,GO:0071944,GO:0097159,GO:1901363 1.10.3.14 ko:K00425 ko00190,ko01100,ko02020,map00190,map01100,map02020 M00153 R11325 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.4.3 iPC815.YPO1117,iSBO_1134.SBO_2253,iSFxv_1172.SFxv_0621,iS_1188.S0577,iSbBS512_1146.SbBS512_E2337 Bacteria 1TRH4@1239,3F4MJ@33958,4HA19@91061,COG1271@1,COG1271@2 NA|NA|NA C ubiquinol oxidase HOOMBAJD_01852 568703.LGG_02209 4.1e-237 827.0 Lactobacillaceae pdp GO:0003674,GO:0003824,GO:0004645,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0009032,GO:0016740,GO:0016757,GO:0016758,GO:0016763,GO:0044424,GO:0044444,GO:0044464 2.4.2.2,2.4.2.4 ko:K00756,ko:K00758 ko00240,ko00983,ko01100,ko05219,map00240,map00983,map01100,map05219 R01570,R01876,R02296,R02484,R08222,R08230 RC00063 ko00000,ko00001,ko01000 iHN637.CLJU_RS08925 Bacteria 1TPCH@1239,3F45P@33958,4H9NP@91061,COG0213@1,COG0213@2 NA|NA|NA F pyrimidine-nucleoside phosphorylase HOOMBAJD_01853 568703.LGG_02210 6.5e-174 616.7 Lactobacillaceae add 3.5.4.4 ko:K01488,ko:K02029 ko00230,ko01100,ko05340,map00230,map01100,map05340 M00236 R01560,R02556 RC00477 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.3 iHN637.CLJU_RS13960 Bacteria 1U44B@1239,3F5RC@33958,4HCES@91061,COG1816@1,COG1816@2 NA|NA|NA F Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism HOOMBAJD_01854 568703.LGG_02211 1.7e-37 161.4 Lactobacillaceae Bacteria 1W1YJ@1239,2900D@1,2ZMQP@2,3F8VC@33958,4I01F@91061 NA|NA|NA HOOMBAJD_01855 568703.LGG_02212 4.9e-87 327.0 Lactobacillaceae Bacteria 1U5KG@1239,2CCK1@1,309S4@2,3F64Y@33958,4IFBA@91061 NA|NA|NA HOOMBAJD_01856 568703.LGG_02213 2.7e-24 117.1 Lactobacillaceae Bacteria 1U786@1239,29PYW@1,30AXC@2,3F93Q@33958,4IH32@91061 NA|NA|NA HOOMBAJD_01857 568703.LGG_02214 5.2e-162 577.0 Lactobacillaceae yicL Bacteria 1TR6G@1239,3F423@33958,4HAMD@91061,COG0697@1,COG0697@2 NA|NA|NA EG EamA-like transporter family HOOMBAJD_01858 568703.LGG_02215 1.9e-112 411.8 Lactobacillaceae tag 3.2.2.20 ko:K01246 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Bacteria 1UYWG@1239,3F5KA@33958,4HGWW@91061,COG2818@1,COG2818@2 NA|NA|NA L glycosylase HOOMBAJD_01859 568703.LGG_02217 4.2e-77 293.9 Lactobacillaceae usp5 ko:K03499,ko:K06149 ko00000,ko02000 2.A.38.1,2.A.38.4 Bacteria 1VEJR@1239,3F4Z0@33958,4HNHG@91061,COG0589@1,COG0589@2 NA|NA|NA T universal stress protein HOOMBAJD_01860 568703.LGG_02218 4.7e-64 250.4 Lactobacillaceae Bacteria 1U7J6@1239,29Q5Z@1,30B4V@2,3F9SW@33958,4IHG0@91061 NA|NA|NA K Helix-turn-helix XRE-family like proteins HOOMBAJD_01861 568703.LGG_02220 4.9e-145 520.4 Lactobacillaceae ptp3 3.1.3.48 ko:K01104 ko00000,ko01000 Bacteria 1VBGE@1239,3FBJY@33958,4HN6J@91061,COG2365@1,COG2365@2 NA|NA|NA T Tyrosine phosphatase family HOOMBAJD_01862 568703.LGG_02221 1.3e-223 781.9 Lactobacillaceae queG GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0016491,GO:0018130,GO:0019438,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0052693,GO:0055086,GO:0055114,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 1.17.99.6 ko:K18979 ko00000,ko01000,ko03016 Bacteria 1TP6Q@1239,3F5I3@33958,4HAEW@91061,COG1600@1,COG1600@2 NA|NA|NA C Domain of unknown function (DUF1730) HOOMBAJD_01863 568703.LGG_02222 4.1e-62 243.8 Lactobacillaceae Bacteria 1U6FN@1239,29PE3@1,30ABP@2,3F7TB@33958,4IG7M@91061 NA|NA|NA HOOMBAJD_01864 568703.LGG_02223 1.4e-87 328.9 Lactobacillaceae bioY GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0042802,GO:0044464,GO:0071944 ko:K03523 ko02010,map02010 M00581,M00582 ko00000,ko00001,ko00002,ko02000 2.A.88.1,2.A.88.2 Bacteria 1VAAD@1239,3F6YG@33958,4HI8T@91061,COG1268@1,COG1268@2 NA|NA|NA S BioY family HOOMBAJD_01866 568703.LGG_02224 4.2e-102 377.5 Lactobacillaceae ko:K15256 ko00000,ko01000,ko03016 Bacteria 1U7E4@1239,3F9GA@33958,4IHA0@91061,COG0500@1,COG0500@2 NA|NA|NA Q methyltransferase HOOMBAJD_01867 568703.LGG_02225 2.6e-98 365.5 Lactobacillaceae Bacteria 1VB6H@1239,3F66H@33958,4I1GZ@91061,COG3103@1,COG3103@2 NA|NA|NA T Sh3 type 3 domain protein HOOMBAJD_01868 568703.LGG_02226 3.9e-113 414.1 Lactobacillaceae yfeJ 6.3.5.2 ko:K01951 ko00230,ko00983,ko01100,map00230,map00983,map01100 M00050 R01230,R01231,R08244 RC00010,RC00204 ko00000,ko00001,ko00002,ko01000,ko01002 Bacteria 1UAH0@1239,3F4AV@33958,4HHTX@91061,COG0518@1,COG0518@2 NA|NA|NA F glutamine amidotransferase HOOMBAJD_01869 568703.LGG_02227 8e-137 493.0 Lactobacillaceae Bacteria 1VAHN@1239,3FBBD@33958,4HY6J@91061,COG4295@1,COG4295@2 NA|NA|NA S Uncharacterized protein conserved in bacteria (DUF2263) HOOMBAJD_01870 568703.LGG_02228 4.9e-257 893.3 Lactobacillaceae yhdP ko:K03699,ko:K06189 ko00000,ko02000,ko02042 9.A.40.1.2 Bacteria 1TPN0@1239,3F3TX@33958,4H9SB@91061,COG1253@1,COG1253@2 NA|NA|NA S Transporter associated domain HOOMBAJD_01871 568703.LGG_02229 7.2e-144 516.5 Lactobacillaceae Bacteria 1VSYU@1239,3F4J2@33958,4HU15@91061,COG4814@1,COG4814@2 NA|NA|NA S Alpha beta hydrolase HOOMBAJD_01872 568703.LGG_02230 2.5e-194 684.5 Lactobacillaceae Bacteria 1V08V@1239,3F5QM@33958,4IRX9@91061,COG3594@1,COG3594@2 NA|NA|NA I Acyltransferase HOOMBAJD_01873 568703.LGG_02231 2.4e-262 911.0 Lactobacillaceae lmrB Bacteria 1TPRN@1239,3F4A2@33958,4H9VV@91061,COG0477@1,COG2814@2 NA|NA|NA EGP Major facilitator Superfamily HOOMBAJD_01874 568703.LGG_02232 4.4e-83 313.9 Lactobacillaceae Bacteria 1U5T4@1239,2C9UQ@1,309VR@2,3F6FU@33958,4IFH1@91061 NA|NA|NA S Domain of unknown function (DUF4811) HOOMBAJD_01875 568703.LGG_02233 4.2e-95 354.0 Lactobacillaceae maf GO:0000278,GO:0000281,GO:0000910,GO:0000917,GO:0005575,GO:0005623,GO:0007049,GO:0008150,GO:0009987,GO:0016043,GO:0022402,GO:0022607,GO:0030428,GO:0032506,GO:0044085,GO:0044464,GO:0051301,GO:0061640,GO:0071840,GO:0090529,GO:1902410,GO:1903047 ko:K06287 ko00000 Bacteria 1V6FH@1239,3F65C@33958,4HIMK@91061,COG0424@1,COG0424@2 NA|NA|NA D nucleoside-triphosphate diphosphatase activity HOOMBAJD_01876 568703.LGG_02234 0.0 1255.7 Lactobacillaceae mutL GO:0000166,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008144,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0030554,GO:0032300,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033554,GO:0034641,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363,GO:1990391 ko:K03572 ko03430,map03430 ko00000,ko00001,ko03400 Bacteria 1TPGK@1239,3F3PK@33958,4HB34@91061,COG0323@1,COG0323@2 NA|NA|NA L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex HOOMBAJD_01877 568703.LGG_02235 0.0 1656.7 Lactobacillaceae mutS GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 ko:K03555 ko03430,map03430 ko00000,ko00001,ko03400 Bacteria 1TPRJ@1239,3F4A5@33958,4HA63@91061,COG0249@1,COG0249@2 NA|NA|NA L that it carries out the mismatch recognition step. This protein has a weak ATPase activity HOOMBAJD_01878 568703.LGG_02236 0.0 1143.3 Lactobacillaceae ydaO GO:0003333,GO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0006865,GO:0008150,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015179,GO:0015291,GO:0015297,GO:0015318,GO:0015711,GO:0015807,GO:0015849,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0046942,GO:0046943,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098656,GO:1902475,GO:1903825,GO:1905039 Bacteria 1TQE1@1239,3F44Y@33958,4HAZH@91061,COG0531@1,COG0531@2 NA|NA|NA E amino acid HOOMBAJD_01879 568703.LGG_02238 1.1e-56 225.7 Lactobacillaceae Bacteria 1W3MW@1239,2EUB0@1,33MTD@2,3F7TK@33958,4HZUX@91061 NA|NA|NA S Domain of unknown function (DUF1827) HOOMBAJD_01880 568703.LGG_02239 4.5e-294 1016.5 Lactobacillaceae groL GO:0001817,GO:0001819,GO:0001871,GO:0002791,GO:0002793,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009986,GO:0009987,GO:0016465,GO:0030246,GO:0030247,GO:0032677,GO:0032757,GO:0032879,GO:0032880,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0044764,GO:0046812,GO:0048518,GO:0048522,GO:0050707,GO:0050708,GO:0050714,GO:0050715,GO:0050789,GO:0050794,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051082,GO:0051222,GO:0051223,GO:0051239,GO:0051240,GO:0051704,GO:0061077,GO:0065007,GO:0070201,GO:0090087,GO:0098630,GO:0098743,GO:0101031,GO:1903530,GO:1903532,GO:1904951,GO:1990220,GO:2000482,GO:2000484,GO:2001065 ko:K04077 ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152 ko00000,ko00001,ko03019,ko03029,ko03110,ko04147 Bacteria 1TP1T@1239,3F3MM@33958,4HA38@91061,COG0459@1,COG0459@2 NA|NA|NA O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions HOOMBAJD_01881 1423732.BALS01000008_gene814 6.7e-44 183.0 Lactobacillaceae groS GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006355,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010033,GO:0010468,GO:0010556,GO:0016020,GO:0016032,GO:0016465,GO:0019058,GO:0019068,GO:0019219,GO:0019222,GO:0019899,GO:0030312,GO:0031323,GO:0031326,GO:0032991,GO:0033554,GO:0034605,GO:0035375,GO:0035966,GO:0040007,GO:0042221,GO:0042802,GO:0043167,GO:0043169,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046677,GO:0046872,GO:0050789,GO:0050794,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0051171,GO:0051252,GO:0051704,GO:0051716,GO:0060255,GO:0061077,GO:0065007,GO:0071944,GO:0080090,GO:0101031,GO:1903506,GO:1990220,GO:2000112,GO:2001141 ko:K04078 ko00000,ko03029,ko03110 Bacteria 1V9ZM@1239,3F7CZ@33958,4HKEK@91061,COG0234@1,COG0234@2 NA|NA|NA O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter HOOMBAJD_01882 568703.LGG_02241 7.2e-110 403.3 Lactobacillaceae ydiL ko:K07052 ko00000 Bacteria 1UZGJ@1239,3F5JU@33958,4HFCB@91061,COG1266@1,COG1266@2 NA|NA|NA S CAAX protease self-immunity HOOMBAJD_01883 568703.LGG_02242 3.7e-196 690.6 Lactobacillaceae brpA Bacteria 1TR1B@1239,3F3MQ@33958,4HA09@91061,COG1316@1,COG1316@2 NA|NA|NA K Cell envelope-like function transcriptional attenuator common domain protein HOOMBAJD_01884 568703.LGG_02244 1.2e-183 649.0 Lactobacillaceae Bacteria 1U6YM@1239,2DKT0@1,30APV@2,3F8QM@33958,4IGSU@91061 NA|NA|NA HOOMBAJD_01885 568703.LGG_02245 9.7e-158 562.8 Lactobacillaceae ytrB ko:K01990,ko:K16921 ko02010,map02010 M00254,M00584 ko00000,ko00001,ko00002,ko02000 3.A.1 Bacteria 1TPQW@1239,3FC3A@33958,4HA3P@91061,COG1131@1,COG1131@2 NA|NA|NA V ABC transporter HOOMBAJD_01886 568703.LGG_02246 1e-60 239.2 Lactobacillaceae ytrA ko:K07978,ko:K07979 ko00000,ko03000 Bacteria 1VFD0@1239,3F7AX@33958,4HNIT@91061,COG1725@1,COG1725@2 NA|NA|NA K helix_turn_helix gluconate operon transcriptional repressor HOOMBAJD_01887 568703.LGG_02247 2.8e-117 427.9 Lactobacillaceae rex ko:K01926 ko00000,ko03000 Bacteria 1TSMR@1239,3F40G@33958,4HB7Q@91061,COG2344@1,COG2344@2 NA|NA|NA K Modulates transcription in response to changes in cellular NADH NAD( ) redox state HOOMBAJD_01888 568703.LGG_02248 0.0 1263.1 Lactobacillaceae uup ko:K06158 ko00000,ko03012 Bacteria 1TPAX@1239,3F3QI@33958,4HBVV@91061,COG0488@1,COG0488@2 NA|NA|NA S ABC transporter, ATP-binding protein HOOMBAJD_01889 568703.LGG_02249 1.6e-49 201.8 Lactobacillaceae 2.7.1.196,2.7.1.205 ko:K02760 ko00500,ko02060,map00500,map02060 M00275 R11170,R11172 RC00017,RC03206 ko00000,ko00001,ko00002,ko01000,ko02000 4.A.3.2 Bacteria 1VADE@1239,3F6GU@33958,4HKG9@91061,COG1440@1,COG1440@2 NA|NA|NA G PTS system, Lactose/Cellobiose specific IIB subunit HOOMBAJD_01890 568703.LGG_02250 1.8e-187 661.8 Lactobacillaceae tsaD GO:0000287,GO:0000408,GO:0002949,GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005488,GO:0005506,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006508,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0019538,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0070011,GO:0070525,GO:0071704,GO:0090304,GO:0140030,GO:0140032,GO:0140096,GO:1901360,GO:1901564 2.3.1.234 ko:K01409,ko:K03070 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 R10648 RC00070,RC00416 ko00000,ko00001,ko00002,ko01000,ko02044,ko03016 3.A.5.1,3.A.5.10,3.A.5.2,3.A.5.4 Bacteria 1TQDR@1239,3F4AX@33958,4HANB@91061,COG0533@1,COG0533@2 NA|NA|NA J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction HOOMBAJD_01891 568703.LGG_02251 2.3e-98 364.8 Lactobacillaceae rimI 2.3.1.128 ko:K03789 ko00000,ko01000,ko03009 Bacteria 1V6KU@1239,3F522@33958,4HIKU@91061,COG0454@1,COG0456@2 NA|NA|NA K Ribosomal-protein-alanine acetyltransferase HOOMBAJD_01892 568703.LGG_02252 5.3e-130 470.3 Lactobacillaceae yeaZ GO:0002949,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006508,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0019538,GO:0034470,GO:0034641,GO:0034660,GO:0042802,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070011,GO:0070525,GO:0071704,GO:0090304,GO:0140096,GO:1901360,GO:1901564 2.3.1.234 ko:K01409,ko:K14742 R10648 RC00070,RC00416 ko00000,ko01000,ko03016 Bacteria 1V4YX@1239,3F3WV@33958,4HHD7@91061,COG1214@1,COG1214@2 NA|NA|NA O Universal bacterial protein YeaZ HOOMBAJD_01893 568703.LGG_02253 7e-119 433.3 Lactobacillaceae Bacteria 1U7CF@1239,2AQ5J@1,31FAY@2,3F9CK@33958,4IH7T@91061 NA|NA|NA HOOMBAJD_01894 568703.LGG_02255 7.3e-89 333.2 Lactobacillaceae folT 2.7.13.3 ko:K02478,ko:K07704 ko02020,map02020 M00492 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Bacteria 1VB87@1239,3FBSH@33958,4ISET@91061,COG3275@1,COG3275@2 NA|NA|NA T ECF transporter, substrate-specific component HOOMBAJD_01895 568703.LGG_02256 1.5e-180 638.6 Lactobacillaceae ansA 3.5.1.1 ko:K01424 ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110 R00485 RC00010,RC02798 ko00000,ko00001,ko01000 Bacteria 1TPP9@1239,3F3XA@33958,4H9YJ@91061,COG0252@1,COG0252@2 NA|NA|NA EJ Asparaginase HOOMBAJD_01896 568703.LGG_02257 1.3e-142 512.3 Lactobacillaceae fat 3.1.2.21 ko:K01071 ko00061,ko01100,map00061,map01100 R04014,R08157,R08158 RC00014,RC00039 ko00000,ko00001,ko01000,ko01004 Bacteria 1V3RB@1239,3F41B@33958,4HHJ4@91061,COG3884@1,COG3884@2 NA|NA|NA I Acyl-ACP thioesterase HOOMBAJD_01897 568703.LGG_02258 1.7e-151 542.0 Lactobacillaceae rsmI GO:0000154,GO:0000451,GO:0000453,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044464,GO:0046483,GO:0070677,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.198 ko:K07056 ko00000,ko01000,ko03009 Bacteria 1TP6U@1239,3F4AI@33958,4HAH8@91061,COG0313@1,COG0313@2 NA|NA|NA H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA HOOMBAJD_01898 1423816.BACQ01000053_gene2040 1.7e-57 228.4 Lactobacillaceae yabA GO:0003674,GO:0005488,GO:0005515,GO:0042802 Bacteria 1VA1F@1239,3F864@33958,4HKND@91061,COG4467@1,COG4467@2 NA|NA|NA L Involved in initiation control of chromosome replication HOOMBAJD_01899 568703.LGG_02260 1.3e-174 619.0 Lactobacillaceae holB 2.7.7.7 ko:K02341 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Bacteria 1TRVS@1239,3F50D@33958,4HA3T@91061,COG0470@1,COG0470@2 NA|NA|NA L DNA polymerase III HOOMBAJD_01900 568703.LGG_02261 7.8e-52 209.5 Lactobacillaceae yaaQ Bacteria 1V6NI@1239,3F6VW@33958,4HIHA@91061,COG3870@1,COG3870@2 NA|NA|NA S Cyclic-di-AMP receptor HOOMBAJD_01901 568703.LGG_02262 2.2e-114 418.3 Lactobacillaceae tmk GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.9 ko:K00943 ko00240,ko01100,map00240,map01100 M00053 R02094,R02098 RC00002 ko00000,ko00001,ko00002,ko01000 iSB619.SA_RS02535 Bacteria 1V1HE@1239,3F4JR@33958,4HGWR@91061,COG0125@1,COG0125@2 NA|NA|NA F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis HOOMBAJD_01902 568703.LGG_02263 8.7e-38 162.5 Lactobacillaceae Bacteria 1U6HS@1239,2DKQT@1,30ADD@2,3F7Y1@33958,4IGA3@91061 NA|NA|NA S Protein of unknown function (DUF2508) HOOMBAJD_01903 568703.LGG_02264 5.6e-109 400.2 Lactobacillaceae recR GO:0000731,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009987,GO:0018130,GO:0019438,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:1901360,GO:1901362,GO:1901576 ko:K06187 ko03440,map03440 ko00000,ko00001,ko03400 Bacteria 1TR87@1239,3F4JQ@33958,4HAZR@91061,COG0353@1,COG0353@2 NA|NA|NA L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO HOOMBAJD_01904 568703.LGG_02265 1.5e-33 148.7 Lactobacillaceae yaaK ko:K09747 ko00000 Bacteria 1VA1S@1239,3F7F3@33958,4HKH3@91061,COG0718@1,COG0718@2 NA|NA|NA S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection HOOMBAJD_01905 568703.LGG_02266 0.0 1084.7 Lactobacillaceae dnaX GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901576 2.7.7.7 ko:K02341,ko:K02343 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Bacteria 1TPS9@1239,3F3P2@33958,4HAUE@91061,COG2812@1,COG2812@2 NA|NA|NA L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity HOOMBAJD_01906 568703.LGG_02267 8.9e-87 326.2 Lactobacillaceae tadA GO:0002097,GO:0002100,GO:0006139,GO:0006382,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016553,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 3.5.4.33 ko:K11991 R10223 RC00477 ko00000,ko01000,ko03016 Bacteria 1V3HZ@1239,3F6IS@33958,4HH7S@91061,COG0590@1,COG0590@2 NA|NA|NA F Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) HOOMBAJD_01907 568703.LGG_02268 4.7e-49 200.3 Lactobacillaceae Bacteria 1VKX3@1239,2EMDH@1,33F2E@2,3F709@33958,4HR5Y@91061 NA|NA|NA HOOMBAJD_01908 568703.LGG_02269 3.4e-106 391.0 Lactobacillaceae rsmC GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016740,GO:0016741,GO:0032259,GO:0044424,GO:0044464 2.1.1.172 ko:K00564 R07234 RC00003 ko00000,ko01000,ko03009 Bacteria 1V1BG@1239,3F4NU@33958,4HHCA@91061,COG2813@1,COG2813@2 NA|NA|NA J Methyltransferase HOOMBAJD_01909 568703.LGG_02270 0.0 1687.9 Lactobacillaceae mprF GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 2.3.2.3 ko:K07027,ko:K14205 ko01503,ko02020,ko05150,map01503,map02020,map05150 M00726 ko00000,ko00001,ko00002,ko01000,ko01504,ko02000 2.A.1.3.37,4.D.2 iYO844.BG12900 Bacteria 1TQI2@1239,3F3PY@33958,4HBHU@91061,COG0392@1,COG0392@2,COG2898@1,COG2898@2 NA|NA|NA S Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms HOOMBAJD_01911 714313.LSA_10740 1.7e-55 221.9 Lactobacillaceae ypaA ko:K08987 ko00000 Bacteria 1VAVU@1239,3F7NA@33958,4HQHN@91061,COG3759@1,COG3759@2 NA|NA|NA S Protein of unknown function (DUF1304) HOOMBAJD_01912 1122149.BACN01000113_gene2019 2.8e-66 258.1 Lactobacillaceae Bacteria 1TQ93@1239,3F4RD@33958,4HDNZ@91061,COG3464@1,COG3464@2 NA|NA|NA L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein HOOMBAJD_01913 862514.HMPREF0623_1599 9.1e-32 142.1 Lactobacillaceae yxaB ko:K19426 ko00000,ko01000 Bacteria 1V5MK@1239,3F5ZU@33958,4HB4G@91061,COG5039@1,COG5039@2 NA|NA|NA GM Polysaccharide pyruvyl transferase HOOMBAJD_01914 1423734.JCM14202_2807 2.3e-159 568.5 Lactobacillaceae repA Bacteria 1VHQA@1239,2DP1C@1,3304N@2,3F55E@33958,4HPY6@91061 NA|NA|NA S Replication initiator protein A HOOMBAJD_01915 1423743.JCM14108_3253 8.7e-44 182.6 Lactobacillaceae relB ko:K07473 ko00000,ko02048 Bacteria 1VGJW@1239,3F72D@33958,4HR7A@91061,COG3077@1,COG3077@2 NA|NA|NA L Addiction module antitoxin, RelB DinJ family HOOMBAJD_01916 1423780.LOT_2224 1.6e-85 322.0 Lactobacillaceae Bacteria 1VQDB@1239,2EHZR@1,33BR8@2,3F5IT@33958,4HRJT@91061 NA|NA|NA HOOMBAJD_01917 1423807.BACO01000083_gene2425 8.9e-41 172.6 Lactobacillaceae Bacteria 1VKZC@1239,2EJES@1,33D5R@2,3F6Y2@33958,4HRGI@91061 NA|NA|NA HOOMBAJD_01918 1122149.BACN01000108_gene2024 1.7e-23 114.8 Lactobacillaceae Bacteria 1U69C@1239,29P8B@1,30A6E@2,3F7CM@33958,4IG0H@91061 NA|NA|NA HOOMBAJD_01919 1423780.LOT_2221 0.0 1290.4 Lactobacillaceae Bacteria 1VQWC@1239,3F4DP@33958,4HD6B@91061,COG0507@1,COG0507@2 NA|NA|NA L MobA MobL family protein HOOMBAJD_01920 1423732.BALS01000046_gene2623 6.2e-257 892.9 Lactobacillaceae ykgC GO:0000302,GO:0000305,GO:0001101,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0010035,GO:0016491,GO:0016667,GO:0019725,GO:0042221,GO:0042592,GO:0044424,GO:0044464,GO:0045454,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1901530,GO:1901700,GO:1990748 1.16.1.1,1.8.1.7 ko:K00383,ko:K00520,ko:K21739 ko00480,ko04918,map00480,map04918 R00094,R00115 RC00011 ko00000,ko00001,ko01000 Bacteria 1TP1W@1239,3FC6T@33958,4HBZF@91061,COG1249@1,COG1249@2 NA|NA|NA C Pyridine nucleotide-disulfide oxidoreductase HOOMBAJD_01921 1423732.BALS01000046_gene2622 4.9e-59 233.8 Lactobacillaceae Bacteria 1TQBI@1239,3F6PI@33958,4HBAT@91061,COG4932@1,COG4932@2 NA|NA|NA M Cna protein B-type domain HOOMBAJD_01922 543734.LCABL_21400 2.6e-31 141.7 Lactobacillaceae Bacteria 1U84X@1239,29QI6@1,30BHM@2,3FAJ4@33958,4II2D@91061 NA|NA|NA HOOMBAJD_01923 543734.LCABL_21410 5.3e-37 159.8 Lactobacillaceae mntH GO:0008150,GO:0009987,GO:0010035,GO:0010038,GO:0010039,GO:0042221,GO:0050896,GO:0051716,GO:0070887,GO:0071241,GO:0071248,GO:0071281 ko:K03322 ko00000,ko02000 2.A.55.2.6,2.A.55.3 Bacteria 1TPT1@1239,3FA6C@33958,4HAEA@91061,COG1914@1,COG1914@2 NA|NA|NA P Natural resistance-associated macrophage protein HOOMBAJD_01924 511437.Lbuc_1192 1e-162 579.3 Lactobacillaceae corA ko:K03284 ko00000,ko02000 1.A.35.1,1.A.35.3 Bacteria 1TPI8@1239,3F4B8@33958,4HE7S@91061,COG0598@1,COG0598@2 NA|NA|NA P CorA-like Mg2+ transporter protein HOOMBAJD_01925 1423816.BACQ01000069_gene2568 7e-56 223.0 Lactobacillaceae tnp2PF3 Bacteria 1VXWA@1239,3F7AF@33958,4HXG3@91061,COG3293@1,COG3293@2 NA|NA|NA L Transposase DDE domain HOOMBAJD_01926 568703.LGG_01149 6e-82 310.1 Lactobacillaceae guaD GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0016070,GO:0034641,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 3.5.4.12,3.5.4.3,3.5.4.33 ko:K01487,ko:K01493,ko:K11991 ko00230,ko00240,ko01100,map00230,map00240,map01100 M00429 R01663,R01676,R10223 RC00074,RC00204,RC00477 ko00000,ko00001,ko00002,ko01000,ko02044,ko03016 Bacteria 1V7G0@1239,3F6S6@33958,4HMR9@91061,COG0590@1,COG0590@2 NA|NA|NA FJ MafB19-like deaminase HOOMBAJD_01927 568703.LGG_01148 5.5e-172 610.1 Lactobacillaceae yceM 1.1.1.18,1.1.1.369 ko:K00010,ko:K03810 ko00521,ko00562,ko01100,ko01120,ko01130,map00521,map00562,map01100,map01120,map01130 R01183,R09951 RC00182 ko00000,ko00001,ko01000 Bacteria 1UZRV@1239,3F4BX@33958,4HEWB@91061,COG0673@1,COG0673@2 NA|NA|NA S Oxidoreductase family, NAD-binding Rossmann fold HOOMBAJD_01928 568703.LGG_01147 3.3e-230 803.9 Lactobacillaceae wbbX ko:K20444 ko00000,ko01000,ko01005,ko02000 4.D.1.3 GT2,GT4 Bacteria 1VIZB@1239,3F9Q1@33958,4HU4N@91061,COG0438@1,COG0438@2 NA|NA|NA M Glycosyl transferases group 1 HOOMBAJD_01929 568703.LGG_01146 7.1e-77 293.9 Lactobacillaceae yttA 2.7.13.3 ko:K07184,ko:K07777,ko:K12065,ko:K13527 ko02020,ko03050,map02020,map03050 M00342,M00478 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022,ko02044,ko03051 3.A.7.11.1 Bacteria 1VH0K@1239,3FBX9@33958,4ITND@91061,COG2433@1,COG2433@2 NA|NA|NA S Pfam Transposase IS66 HOOMBAJD_01930 568703.LGG_01145 2e-115 422.2 Lactobacillaceae ko:K15051 ko00000 Bacteria 1TR37@1239,3F4MB@33958,4HHHQ@91061,COG2169@1,COG2169@2 NA|NA|NA F DNA/RNA non-specific endonuclease HOOMBAJD_01931 568703.LGG_01144 6.6e-47 193.0 Lactobacillaceae ycnE GO:0003674,GO:0003824 3.1.1.29 ko:K01056 ko00000,ko01000,ko03012 Bacteria 1VG4T@1239,3F7H6@33958,4HPNQ@91061,COG1359@1,COG1359@2 NA|NA|NA S Antibiotic biosynthesis monooxygenase HOOMBAJD_01933 568703.LGG_01085 7.3e-258 896.0 Lactobacillaceae pgi GO:0003674,GO:0003824,GO:0004347,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0005996,GO:0006006,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046031,GO:0046034,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576 5.3.1.9 ko:K01810 ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200 M00001,M00004,M00114 R02739,R02740,R03321 RC00376,RC00563 ko00000,ko00001,ko00002,ko01000,ko04147 iLJ478.TM1385 Bacteria 1TP29@1239,3F3XK@33958,4H9VI@91061,COG0166@1,COG0166@2 NA|NA|NA G Belongs to the GPI family HOOMBAJD_01934 568703.LGG_01084 1e-151 542.7 Lactobacillaceae glcU ko:K05340 ko00000,ko02000 2.A.7.5 Bacteria 1TQBN@1239,3F4K2@33958,4HAVH@91061,COG4975@1,COG4975@2 NA|NA|NA U sugar transport HOOMBAJD_01935 568703.LGG_01083 3.9e-110 404.1 Lactobacillaceae vanZ Bacteria 1VK3A@1239,3F5EN@33958,4HPCD@91061,COG4767@1,COG4767@2 NA|NA|NA V VanZ like family HOOMBAJD_01936 568703.LGG_01082 0.0 1417.1 Lactobacillaceae ltaS GO:0005575,GO:0005576 2.7.8.20 ko:K01138,ko:K19005 ko00561,ko01100,map00561,map01100 R05081,R10849 RC00017 ko00000,ko00001,ko01000 Bacteria 1TRMA@1239,3F3R7@33958,4H9S0@91061,COG1368@1,COG1368@2 NA|NA|NA M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily HOOMBAJD_01937 568703.LGG_01081 1.4e-128 465.7 Lactobacillaceae Bacteria 1U7B2@1239,29Z4F@1,30M23@2,3F98Y@33958,4IH62@91061 NA|NA|NA HOOMBAJD_01938 568703.LGG_01080 3.4e-103 380.9 Lactobacillaceae Bacteria 1U77H@1239,29PYD@1,30AWT@2,3F92N@33958,4IH2B@91061 NA|NA|NA HOOMBAJD_01939 568703.LGG_00768 6.1e-210 736.5 Lactobacillaceae Bacteria 1U65R@1239,29P5T@1,30A3Y@2,3F74N@33958,4IFVK@91061 NA|NA|NA HOOMBAJD_01940 568703.LGG_00767 0.0 1743.0 Lactobacillaceae alaS GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 ko:K01872 ko00970,map00970 M00359,M00360 R03038 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Bacteria 1TPK6@1239,3F3QS@33958,4H9XC@91061,COG0013@1,COG0013@2 NA|NA|NA J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain HOOMBAJD_01941 568703.LGG_00765 2.4e-170 604.7 Lactobacillaceae Bacteria 1UJCK@1239,295Z0@1,2ZT9T@2,3F63F@33958,4IT5A@91061 NA|NA|NA HOOMBAJD_01942 568703.LGG_00764 8.1e-249 865.9 Lactobacillaceae cshB GO:0000166,GO:0003674,GO:0003676,GO:0003723,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006807,GO:0006950,GO:0008026,GO:0008144,GO:0008150,GO:0008152,GO:0008186,GO:0009266,GO:0009295,GO:0009409,GO:0009628,GO:0009987,GO:0010501,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043590,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0070035,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:1901265,GO:1901360,GO:1901363 3.6.4.13 ko:K05592,ko:K18692 ko03018,map03018 ko00000,ko00001,ko01000,ko03009,ko03019 Bacteria 1TPAP@1239,3F4FQ@33958,4HA98@91061,COG0513@1,COG0513@2 NA|NA|NA JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures HOOMBAJD_01943 568703.LGG_00763 1.6e-177 628.6 Lactobacillaceae nrnA GO:0008150,GO:0040007 3.1.13.3,3.1.3.7 ko:K06881 ko00920,ko01100,ko01120,map00920,map01100,map01120 R00188,R00508 RC00078 ko00000,ko00001,ko01000,ko03400 Bacteria 1TPXX@1239,3F4FC@33958,4H9ZW@91061,COG0618@1,COG0618@2 NA|NA|NA S DHHA1 domain protein HOOMBAJD_01944 568703.LGG_00762 5.2e-240 836.6 Lactobacillaceae ytoI Bacteria 1TPU6@1239,3F41P@33958,4HB62@91061,COG4109@1,COG4109@2 NA|NA|NA K DRTGG domain HOOMBAJD_01945 568703.LGG_00318 1.6e-49 201.8 Lactobacillaceae yvdC Bacteria 1V6C5@1239,3F7EC@33958,4HM7F@91061,COG1694@1,COG1694@2 NA|NA|NA S MazG nucleotide pyrophosphohydrolase domain HOOMBAJD_01946 568703.LGG_00317 1.8e-122 445.3 Lactobacillaceae livF ko:K01996 ko02010,ko02024,map02010,map02024 M00237 ko00000,ko00001,ko00002,ko02000 3.A.1.4 Bacteria 1TPW4@1239,3F3RP@33958,4HABJ@91061,COG0410@1,COG0410@2 NA|NA|NA E ABC transporter HOOMBAJD_01947 568703.LGG_00316 8.1e-140 503.1 Lactobacillaceae livG ko:K01995,ko:K01998 ko02010,ko02024,map02010,map02024 M00237 ko00000,ko00001,ko00002,ko02000 3.A.1.4 Bacteria 1TR0P@1239,3F4IH@33958,4HASG@91061,COG0411@1,COG0411@2 NA|NA|NA E Branched-chain amino acid ATP-binding cassette transporter HOOMBAJD_01948 568703.LGG_00315 1.7e-120 439.1 Lactobacillaceae livM ko:K01995,ko:K01998 ko02010,ko02024,map02010,map02024 M00237 ko00000,ko00001,ko00002,ko02000 3.A.1.4 Bacteria 1TPMZ@1239,3F44M@33958,4HBB8@91061,COG4177@1,COG4177@2 NA|NA|NA E Branched-chain amino acid transport system / permease component HOOMBAJD_01949 568703.LGG_00314 6.7e-151 540.0 Lactobacillaceae livH ko:K01997 ko02010,ko02024,map02010,map02024 M00237 ko00000,ko00001,ko00002,ko02000 3.A.1.4 Bacteria 1TR24@1239,3F56V@33958,4HBFZ@91061,COG0559@1,COG0559@2 NA|NA|NA U Branched-chain amino acid transport system / permease component HOOMBAJD_01950 568703.LGG_00313 2.4e-212 744.6 Lactobacillaceae livJ ko:K01999 ko02010,ko02024,map02010,map02024 M00237 ko00000,ko00001,ko00002,ko02000 3.A.1.4 Bacteria 1TPQ2@1239,3F591@33958,4H9PI@91061,COG0683@1,COG0683@2 NA|NA|NA E Receptor family ligand binding region HOOMBAJD_01951 568703.LGG_00312 5.9e-74 283.5 Lactobacillaceae Bacteria 1V6P0@1239,3F63I@33958,4HJ1Y@91061,COG3610@1,COG3610@2 NA|NA|NA S Threonine/Serine exporter, ThrE HOOMBAJD_01952 568703.LGG_00311 2.8e-132 478.0 Lactobacillaceae thrE Bacteria 1TSE8@1239,3F4XE@33958,4HBW1@91061,COG2966@1,COG2966@2 NA|NA|NA S Putative threonine/serine exporter HOOMBAJD_01953 1423816.BACQ01000062_gene2320 2.9e-43 181.0 Lactobacillaceae trxC ko:K03671 ko04621,ko05418,map04621,map05418 ko00000,ko00001,ko03110 Bacteria 1VA3Y@1239,3F7I4@33958,4HKKX@91061,COG3118@1,COG3118@2 NA|NA|NA O Belongs to the thioredoxin family HOOMBAJD_01954 1423732.BALS01000046_gene2613 2.3e-51 208.0 Lactobacillaceae lacF 2.7.1.196,2.7.1.205,2.7.1.207 ko:K02759,ko:K02786 ko00052,ko00500,ko01100,ko02060,map00052,map00500,map01100,map02060 M00275,M00281 R04393,R11170,R11172 RC00017,RC03206 ko00000,ko00001,ko00002,ko01000,ko02000 4.A.3.1,4.A.3.2 Bacteria 1V87W@1239,3FCDI@33958,4HJSY@91061,COG1447@1,COG1447@2 NA|NA|NA G PTS system, Lactose/Cellobiose specific IIA subunit HOOMBAJD_01955 543734.LCABL_07280 3e-286 990.3 Lactobacillaceae lacG 3.2.1.85 ko:K01220 ko00052,ko01100,map00052,map01100 R03256 RC00049 ko00000,ko00001,ko01000 Bacteria 1TP19@1239,3FC7B@33958,4H9KU@91061,COG2723@1,COG2723@2 NA|NA|NA G Belongs to the glycosyl hydrolase 1 family HOOMBAJD_01956 1423816.BACQ01000070_gene2576 0.0 1112.4 Lactobacillaceae celB GO:0005975,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016310,GO:0044237,GO:0044238,GO:0044262,GO:0046835,GO:0071704 2.7.1.196,2.7.1.205,2.7.1.207 ko:K02760,ko:K02787,ko:K02788 ko00052,ko00500,ko01100,ko02060,map00052,map00500,map01100,map02060 M00275,M00281 R04393,R11170,R11172 RC00017,RC03206 ko00000,ko00001,ko00002,ko01000,ko02000 4.A.3.1,4.A.3.2 Bacteria 1TQPV@1239,3F4DV@33958,4HC9I@91061,COG1440@1,COG1440@2,COG1455@1,COG1455@2 NA|NA|NA G Phosphotransferase system, EIIC HOOMBAJD_01957 543734.LCABL_07260 3e-151 541.2 Lactobacillaceae lacT ko:K02531,ko:K02538,ko:K03488 ko00000,ko03000 Bacteria 1VS0S@1239,3F6AX@33958,4HTFM@91061,COG3711@1,COG3711@2 NA|NA|NA K PRD domain HOOMBAJD_01958 1423732.BALS01000046_gene2619 4.2e-50 203.8 Lactobacillaceae epsG 2.4.1.293 ko:K00786,ko:K17250 ko00000,ko01000,ko01003 GT2 Bacteria 1VVRP@1239,3FBSG@33958,4HGSR@91061,COG0463@1,COG0463@2 NA|NA|NA M Glycosyltransferase like family 2 HOOMBAJD_01959 1140001.I571_00001 6.8e-20 102.4 Firmicutes Bacteria 1VI2S@1239,2ED6K@1,3373A@2 NA|NA|NA S the current gene model (or a revised gene model) may contain one or more premature stops and or frameshifts HOOMBAJD_01960 568703.LGG_00307 2.4e-71 274.6 Lactobacillaceae Bacteria 1VB4V@1239,2DX7X@1,32V2Y@2,3F76M@33958,4HKWS@91061 NA|NA|NA S COG NOG38524 non supervised orthologous group HOOMBAJD_01962 568703.LGG_00302 6.1e-35 152.9 Lactobacillaceae Bacteria 1VG42@1239,2EG09@1,339SB@2,3F8E8@33958,4HRC7@91061 NA|NA|NA HOOMBAJD_01963 543734.LCABL_21480 6.8e-127 459.9 Lactobacillaceae tnp ko:K07498 ko00000 Bacteria 1TTKR@1239,3F4NE@33958,4HCB4@91061,COG3316@1,COG3316@2 NA|NA|NA L DDE domain HOOMBAJD_01965 1122147.AUEH01000046_gene2921 1.7e-101 375.9 Lactobacillaceae ko:K03496 ko00000,ko03036,ko04812 Bacteria 1TP8S@1239,3F4QA@33958,4HCBZ@91061,COG1192@1,COG1192@2 NA|NA|NA D CobQ CobB MinD ParA nucleotide binding domain protein HOOMBAJD_01966 1423732.BALS01000115_gene22 2.3e-95 356.3 Lactobacillaceae repE Bacteria 1UBUD@1239,3F57X@33958,4HB0A@91061,COG1959@1,COG1959@2 NA|NA|NA K Primase C terminal 1 (PriCT-1) HOOMBAJD_01968 568703.LGG_00362 0.0 1137.5 Lactobacillaceae nisT ko:K06147 ko00000,ko02000 3.A.1.106,3.A.1.109,3.A.1.21 Bacteria 1TPZP@1239,3F53S@33958,4HDMH@91061,COG1132@1,COG1132@2 NA|NA|NA V ABC transporter HOOMBAJD_01969 13249.RPRC013476-PA 2.4e-08 63.9 Paraneoptera DNAH3 GO:0000003,GO:0000226,GO:0001578,GO:0003341,GO:0003674,GO:0003774,GO:0003777,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005856,GO:0005858,GO:0005875,GO:0005929,GO:0005930,GO:0006928,GO:0006996,GO:0007010,GO:0007017,GO:0007018,GO:0007320,GO:0007618,GO:0007620,GO:0008150,GO:0008569,GO:0009605,GO:0009612,GO:0009628,GO:0009987,GO:0010996,GO:0015630,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019953,GO:0022414,GO:0022607,GO:0030030,GO:0030031,GO:0030286,GO:0032501,GO:0032504,GO:0032838,GO:0032991,GO:0034622,GO:0035082,GO:0036156,GO:0036159,GO:0042623,GO:0042995,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044422,GO:0044424,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044447,GO:0044463,GO:0044464,GO:0044703,GO:0044706,GO:0044782,GO:0045503,GO:0045505,GO:0046692,GO:0048609,GO:0050896,GO:0051704,GO:0051959,GO:0060271,GO:0065003,GO:0070286,GO:0070925,GO:0071840,GO:0097014,GO:0099568,GO:0120025,GO:0120031,GO:0120036,GO:0120038,GO:1902494,GO:1990939 ko:K10408 ko05016,map05016 ko00000,ko00001,ko04812 Arthropoda 38EZQ@33154,3BFZQ@33208,3CR7W@33213,3E7ET@33342,3SK10@50557,41XG1@6656,COG5245@1,KOG3595@2759 NA|NA|NA Z Dynein heavy chain, N-terminal region 2 HOOMBAJD_01970 568703.LGG_01389 1.5e-218 765.4 Lactobacillaceae rpsA 1.17.7.4 ko:K02945,ko:K03527 ko00900,ko01100,ko01110,ko01130,ko03010,map00900,map01100,map01110,map01130,map03010 M00096,M00178 R05884,R08210 RC01137,RC01487 br01610,ko00000,ko00001,ko00002,ko01000,ko03011 Bacteria 1TQ9N@1239,3F4DQ@33958,4H9PX@91061,COG0539@1,COG0539@2 NA|NA|NA J Ribosomal protein S1 HOOMBAJD_01971 568703.LGG_01390 2.6e-244 850.9 Lactobacillaceae der GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0030312,GO:0040007,GO:0044464,GO:0071944 1.1.1.399,1.1.1.95 ko:K00058,ko:K03977 ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230 M00020 R01513 RC00031 ko00000,ko00001,ko00002,ko01000,ko03009,ko04147 Bacteria 1TPNM@1239,3F4V0@33958,4HAJ6@91061,COG1160@1,COG1160@2 NA|NA|NA S GTPase that plays an essential role in the late steps of ribosome biogenesis HOOMBAJD_01972 568703.LGG_01391 2e-40 171.4 Lactobacillaceae hup ko:K03530 ko00000,ko03032,ko03036,ko03400 Bacteria 1V9XQ@1239,3F6YN@33958,4HKF2@91061,COG0776@1,COG0776@2 NA|NA|NA L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions HOOMBAJD_01973 568703.LGG_01392 1.3e-235 822.0 Lactobacillaceae Bacteria 1TT97@1239,3F3ND@33958,4HAIA@91061,COG0457@1,COG0457@2 NA|NA|NA S Tetratricopeptide repeat protein HOOMBAJD_01974 568703.LGG_01393 1.1e-148 532.7 Lactobacillaceae ypjC Bacteria 1TRAU@1239,3F44R@33958,4H9UY@91061,COG1284@1,COG1284@2 NA|NA|NA S Uncharacterised 5xTM membrane BCR, YitT family COG1284 HOOMBAJD_01975 568703.LGG_01394 8.1e-224 782.7 Lactobacillaceae cca 2.7.7.19,2.7.7.72 ko:K00970,ko:K00974 ko03013,ko03018,map03013,map03018 R09382,R09383,R09384,R09386 RC00078 ko00000,ko00001,ko01000,ko03016,ko03019 Bacteria 1TQ2A@1239,3F3VH@33958,4HB2W@91061,COG0617@1,COG0617@2 NA|NA|NA J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate HOOMBAJD_01976 568703.LGG_01395 9.6e-85 319.3 Lactobacillaceae Bacteria 1V54W@1239,2A42J@1,30SMC@2,3F3R1@33958,4HGI5@91061 NA|NA|NA HOOMBAJD_01977 568703.LGG_01396 0.0 1136.3 Lactobacillaceae yfmR ko:K15738 ko00000,ko02000 3.A.1.120.6 Bacteria 1TPAX@1239,3FC7W@33958,4H9TK@91061,COG0488@1,COG0488@2 NA|NA|NA S ABC transporter, ATP-binding protein HOOMBAJD_01978 568703.LGG_01397 1.9e-191 674.9 Lactobacillaceae thyA GO:0003674,GO:0003824,GO:0004799,GO:0006139,GO:0006220,GO:0006221,GO:0006231,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0009056,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009125,GO:0009129,GO:0009130,GO:0009131,GO:0009157,GO:0009159,GO:0009162,GO:0009165,GO:0009166,GO:0009176,GO:0009177,GO:0009178,GO:0009219,GO:0009221,GO:0009223,GO:0009262,GO:0009263,GO:0009264,GO:0009265,GO:0009394,GO:0009987,GO:0016740,GO:0016741,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0032259,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042083,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046073,GO:0046078,GO:0046079,GO:0046385,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0072529,GO:0090407,GO:1901135,GO:1901136,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 2.1.1.45 ko:K00560 ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523 M00053 R02101 RC00219,RC00332 ko00000,ko00001,ko00002,ko01000 Bacteria 1TSIR@1239,3F3SB@33958,4H9QS@91061,COG0207@1,COG0207@2 NA|NA|NA F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis HOOMBAJD_01979 568703.LGG_01398 6.7e-92 343.2 Lactobacillaceae folA 1.5.1.3,1.5.1.47,2.1.1.45,3.5.4.12 ko:K00287,ko:K00560,ko:K01493,ko:K05896,ko:K17364 ko00240,ko00670,ko00790,ko01100,ko01523,map00240,map00670,map00790,map01100,map01523 M00053,M00126,M00429,M00840 R00936,R00937,R00939,R00940,R01663,R02101,R02235,R02236,R03388,R11765 RC00074,RC00109,RC00110,RC00158,RC00219,RC00332,RC01584 ko00000,ko00001,ko00002,ko01000,ko02044,ko03036 Bacteria 1VB80@1239,3F6Y4@33958,4HIGJ@91061,COG0262@1,COG0262@2 NA|NA|NA H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis HOOMBAJD_01980 568703.LGG_01399 5.3e-113 413.7 Lactobacillaceae hly ko:K11068 ko00000,ko02042 Bacteria 1TSFK@1239,3F578@33958,4HAT2@91061,COG1272@1,COG1272@2 NA|NA|NA S protein, hemolysin III HOOMBAJD_01981 568703.LGG_01400 2.3e-148 531.6 Lactobacillaceae DegV Bacteria 1TRZ4@1239,3F4CW@33958,4HBR8@91061,COG1307@1,COG1307@2 NA|NA|NA S EDD domain protein, DegV family HOOMBAJD_01982 568703.LGG_01401 7.8e-157 559.7 Lactobacillaceae ypmR GO:0003674,GO:0003824,GO:0004620,GO:0004622,GO:0016298,GO:0016787,GO:0016788,GO:0052689 Bacteria 1V1HR@1239,3F4N0@33958,4HDXS@91061,COG2755@1,COG2755@2 NA|NA|NA E GDSL-like Lipase/Acylhydrolase HOOMBAJD_01983 568703.LGG_01402 1.5e-112 412.1 Lactobacillaceae ypmS Bacteria 1VF0K@1239,3F5K5@33958,4HIYN@91061,COG4698@1,COG4698@2 NA|NA|NA S Uncharacterized protein conserved in bacteria (DUF2140) HOOMBAJD_01984 568703.LGG_01403 2.1e-96 358.2 Lactobacillaceae msrA 1.8.4.11,1.8.4.12 ko:K07304,ko:K12267 ko00000,ko01000 Bacteria 1V1MJ@1239,3FBG0@33958,4HG4U@91061,COG0225@1,COG0225@2 NA|NA|NA C Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine HOOMBAJD_01985 568703.LGG_01404 2.3e-40 171.0 Lactobacillaceae yozE Bacteria 1VFI4@1239,3F7ZP@33958,4HR7P@91061,COG4479@1,COG4479@2 NA|NA|NA S Belongs to the UPF0346 family HOOMBAJD_01986 568703.LGG_01405 8e-258 896.0 Lactobacillaceae ctpA 3.4.21.102 ko:K03797 ko00000,ko01000,ko01002 Bacteria 1TPBI@1239,3F3SS@33958,4HAKE@91061,COG0793@1,COG0793@2 NA|NA|NA M Belongs to the peptidase S41A family HOOMBAJD_01987 568703.LGG_01406 4.4e-55 220.3 Lactobacillaceae Bacteria 1VA3N@1239,2DMTK@1,32TKW@2,3FC0V@33958,4HMQA@91061 NA|NA|NA HOOMBAJD_01989 568703.LGG_01407 5.3e-130 470.3 Lactobacillaceae Bacteria 1VU2U@1239,28K10@1,2Z9QW@2,3F4AC@33958,4HVDF@91061 NA|NA|NA S Domain of unknown function (DUF4918) HOOMBAJD_01990 568703.LGG_01408 1.8e-156 558.5 Lactobacillaceae ylqF GO:0003674,GO:0003824,GO:0003924,GO:0008150,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0022613,GO:0042254,GO:0044085,GO:0071840 ko:K14540 ko00000,ko03009 Bacteria 1TQGK@1239,3F3MI@33958,4HA4D@91061,COG1161@1,COG1161@2 NA|NA|NA S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity HOOMBAJD_01991 568703.LGG_01409 2.1e-137 495.0 Lactobacillaceae rnhB GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 ko:K03470 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 Bacteria 1V1D6@1239,3F3JC@33958,4HB7M@91061,COG0164@1,COG0164@2 NA|NA|NA L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids HOOMBAJD_01992 568703.LGG_01410 6.6e-145 520.0 Lactobacillaceae dprA GO:0007154,GO:0008150,GO:0009292,GO:0009294,GO:0009605,GO:0009987,GO:0009991,GO:0030420,GO:0031668,GO:0044764,GO:0050896,GO:0051704,GO:0051716,GO:0071496 ko:K04096 ko00000 Bacteria 1TPP7@1239,3F41U@33958,4HGWM@91061,COG0758@1,COG0758@2 NA|NA|NA LU DNA protecting protein DprA HOOMBAJD_01993 568703.LGG_01411 0.0 1333.2 Lactobacillaceae topA 5.99.1.2 ko:K03168 ko00000,ko01000,ko03032,ko03400 Bacteria 1TPUS@1239,3F3VS@33958,4HA6C@91061,COG0550@1,COG0550@2 NA|NA|NA L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone HOOMBAJD_01994 568703.LGG_01412 5e-251 873.2 Lactobacillaceae trmFO GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 2.1.1.74 ko:K04094 ko00000,ko01000,ko03016,ko03036 Bacteria 1TP67@1239,3F3WW@33958,4HB27@91061,COG1206@1,COG1206@2 NA|NA|NA J Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs HOOMBAJD_01995 568703.LGG_01413 7.5e-166 589.7 Lactobacillaceae xerC ko:K03733,ko:K04763 ko00000,ko03036 Bacteria 1TPQB@1239,3F44K@33958,4HARA@91061,COG4974@1,COG4974@2 NA|NA|NA D Belongs to the 'phage' integrase family. XerC subfamily HOOMBAJD_01996 568703.LGG_01414 5.5e-92 343.6 Lactobacillaceae hslV GO:0000166,GO:0000287,GO:0000502,GO:0003674,GO:0003824,GO:0004175,GO:0004298,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0006950,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009266,GO:0009376,GO:0009408,GO:0009628,GO:0009987,GO:0016043,GO:0016787,GO:0017076,GO:0019538,GO:0019904,GO:0022607,GO:0030163,GO:0030554,GO:0031597,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0034214,GO:0035639,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046872,GO:0050896,GO:0051259,GO:0051603,GO:0065003,GO:0070003,GO:0070011,GO:0071704,GO:0071840,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1904949,GO:1905368,GO:1905369 3.4.25.2 ko:K01419 ko00000,ko01000,ko01002 Bacteria 1TPXK@1239,3F4HS@33958,4H9PD@91061,COG5405@1,COG5405@2 NA|NA|NA O Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery HOOMBAJD_01997 568703.LGG_01416 1.1e-256 892.1 Lactobacillaceae hslU GO:0000166,GO:0000287,GO:0000502,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0006950,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009266,GO:0009376,GO:0009408,GO:0009628,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0019904,GO:0022607,GO:0030554,GO:0031597,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0034214,GO:0035639,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043335,GO:0043933,GO:0044085,GO:0044238,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046872,GO:0050896,GO:0051259,GO:0065003,GO:0071704,GO:0071840,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1902494,GO:1904949,GO:1905368,GO:1905369 ko:K03667 ko00000,ko03110 Bacteria 1TPKQ@1239,3F3WB@33958,4HA83@91061,COG1220@1,COG1220@2 NA|NA|NA O this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis HOOMBAJD_01998 568703.LGG_01417 9.6e-174 615.9 Lactobacillaceae lacX 5.1.3.3 ko:K01785 ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130 M00632 R01602,R10619 RC00563 ko00000,ko00001,ko00002,ko01000 Bacteria 1U26T@1239,3F3KT@33958,4HA4J@91061,COG2017@1,COG2017@2 NA|NA|NA G Aldose 1-epimerase HOOMBAJD_01999 568703.LGG_01418 3.4e-109 401.0 Lactobacillaceae plsY GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 2.3.1.15,3.5.1.104 ko:K08591,ko:K22278 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 M00089 R00851,R09380 RC00004,RC00039,RC00041 ko00000,ko00001,ko00002,ko01000,ko01004 Bacteria 1VA3J@1239,3F543@33958,4HC55@91061,COG0344@1,COG0344@2 NA|NA|NA I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP HOOMBAJD_02000 568703.LGG_01419 0.0 1297.3 Lactobacillaceae parE GO:0003674,GO:0003824,GO:0003916,GO:0003918,GO:0005575,GO:0006139,GO:0006259,GO:0006265,GO:0006725,GO:0006807,GO:0006996,GO:0007059,GO:0008094,GO:0008150,GO:0008152,GO:0009295,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016887,GO:0017111,GO:0034335,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0051276,GO:0061505,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360 5.99.1.3 ko:K02470,ko:K02622 ko00000,ko01000,ko02048,ko03032,ko03036,ko03400 Bacteria 1TQCF@1239,3F430@33958,4H9UC@91061,COG0187@1,COG0187@2 NA|NA|NA L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule HOOMBAJD_02001 568703.LGG_01420 0.0 1572.0 Lactobacillaceae parC GO:0005575,GO:0005622,GO:0005623,GO:0009330,GO:0032991,GO:0044424,GO:0044464 5.99.1.3 ko:K02469,ko:K02621 ko00000,ko01000,ko02048,ko03032,ko03036,ko03400 Bacteria 1TRE7@1239,3F3MJ@33958,4HAQB@91061,COG0188@1,COG0188@2 NA|NA|NA L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule HOOMBAJD_02002 568703.LGG_01421 0.0 1543.5 Lactobacillaceae pflB 2.3.1.54 ko:K00656 ko00620,ko00640,ko00650,ko01100,ko01120,map00620,map00640,map00650,map01100,map01120 R00212,R06987 RC00004,RC01181,RC02742,RC02833 ko00000,ko00001,ko01000 Bacteria 1TPTF@1239,3F53K@33958,4H9RD@91061,COG1882@1,COG1882@2 NA|NA|NA C Pyruvate formate lyase-like HOOMBAJD_02003 568703.LGG_01422 4.3e-171 607.1 Lactobacillaceae pflA GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0018307,GO:0019538,GO:0033554,GO:0036211,GO:0043170,GO:0043364,GO:0043365,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0050896,GO:0051536,GO:0051539,GO:0051540,GO:0051716,GO:0055114,GO:0070283,GO:0071704,GO:1901564 1.97.1.4 ko:K04069 R04710 ko00000,ko01000 iECOK1_1307.ECOK1_0925,iEcE24377_1341.EcE24377A_0980,iEcSMS35_1347.EcSMS35_2219,iYL1228.KPN_00930 Bacteria 1TPK2@1239,3F472@33958,4HACV@91061,COG1180@1,COG1180@2 NA|NA|NA C Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine HOOMBAJD_02004 568703.LGG_01423 2.3e-181 641.3 Lactobacillaceae Bacteria 1UYRT@1239,3FBIB@33958,4IQQ1@91061,COG0583@1,COG0583@2 NA|NA|NA K LysR substrate binding domain HOOMBAJD_02005 568703.LGG_01424 9.5e-172 609.4 Lactobacillaceae ppaC GO:0003674,GO:0003824,GO:0004427,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006793,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0044237,GO:0044424,GO:0044464 3.6.1.1 ko:K15986 ko00190,map00190 ko00000,ko00001,ko01000 Bacteria 1TPH6@1239,3F3PJ@33958,4H9T8@91061,COG1227@1,COG1227@2 NA|NA|NA C inorganic pyrophosphatase HOOMBAJD_02006 568703.LGG_01425 9.8e-208 729.2 Lactobacillaceae xerS GO:0000150,GO:0003674,GO:0003824,GO:0006139,GO:0006259,GO:0006310,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008907,GO:0009009,GO:0009037,GO:0009987,GO:0015074,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0140097,GO:1901360 ko:K04763 ko00000,ko03036 Bacteria 1URNQ@1239,3FBHV@33958,4HEPI@91061,COG4974@1,COG4974@2 NA|NA|NA L Belongs to the 'phage' integrase family HOOMBAJD_02007 568703.LGG_01426 0.0 1243.0 Lactobacillaceae ysaB ko:K02004,ko:K19084 ko02010,ko02020,map02010,map02020 M00258,M00731,M00737 ko00000,ko00001,ko00002,ko02000 3.A.1,3.A.1.134 Bacteria 1TR2D@1239,3FBRY@33958,4H9SH@91061,COG0577@1,COG0577@2 NA|NA|NA V FtsX-like permease family HOOMBAJD_02008 568703.LGG_01427 1e-134 486.1 Lactobacillaceae XK27_05695 ko:K02003 M00258 ko00000,ko00002,ko02000 3.A.1 Bacteria 1TNZG@1239,3F3MG@33958,4H9UT@91061,COG1136@1,COG1136@2 NA|NA|NA V ABC transporter, ATP-binding protein HOOMBAJD_02009 568703.LGG_01428 4.7e-174 617.1 Lactobacillaceae Bacteria 1TQSG@1239,3FBXK@33958,4ITPK@91061,COG0642@1,COG0642@2 NA|NA|NA T Histidine kinase-like ATPases HOOMBAJD_02010 568703.LGG_01429 2.8e-128 464.5 Lactobacillaceae Bacteria 1TR32@1239,3FC95@33958,4HIBI@91061,COG0745@1,COG0745@2 NA|NA|NA T Transcriptional regulatory protein, C terminal HOOMBAJD_02011 568703.LGG_01430 1.4e-218 765.4 Lactobacillaceae ko:K08217 br01600,ko00000,ko01504,ko02000 2.A.1.21.1,2.A.1.21.22 Bacteria 1UHRM@1239,3FBXB@33958,4ISTP@91061,COG0477@1,COG0477@2 NA|NA|NA EGP Transmembrane secretion effector HOOMBAJD_02012 568703.LGG_01431 1.3e-66 258.8 Lactobacillaceae msi198 Bacteria 1UI3A@1239,3F83Y@33958,4ISBV@91061,COG0454@1,COG0456@2 NA|NA|NA K Acetyltransferase (GNAT) domain HOOMBAJD_02013 568703.LGG_01432 5.9e-70 270.0 Lactobacillaceae Bacteria 1UVU0@1239,3F7S8@33958,4IG71@91061,COG0454@1,COG0456@2 NA|NA|NA K Acetyltransferase (GNAT) domain HOOMBAJD_02014 568703.LGG_01433 2.6e-112 411.4 Lactobacillaceae nfnB GO:0000166,GO:0003674,GO:0003824,GO:0004155,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0010181,GO:0016491,GO:0016645,GO:0016646,GO:0016651,GO:0016657,GO:0018545,GO:0018973,GO:0018974,GO:0019326,GO:0019439,GO:0032553,GO:0036094,GO:0042537,GO:0042802,GO:0043167,GO:0043168,GO:0044237,GO:0044248,GO:0044424,GO:0044444,GO:0044464,GO:0046256,GO:0046260,GO:0046263,GO:0048037,GO:0050662,GO:0055114,GO:0071704,GO:0072490,GO:0072491,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901575 1.5.1.34 ko:K10679 ko00633,ko01120,map00633,map01120 R08014,R08017,R08042 RC00250 ko00000,ko00001,ko01000 iECUMN_1333.ECUMN_0668,iEcSMS35_1347.EcSMS35_0596,iJN746.PP_2432,iYO844.BSU07830 Bacteria 1UYJU@1239,3F9QI@33958,4HYXD@91061,COG0778@1,COG0778@2 NA|NA|NA C Nitroreductase family HOOMBAJD_02015 568703.LGG_01434 9.2e-147 526.2 Lactobacillaceae Bacteria 1TQDQ@1239,3F585@33958,4HCBR@91061,COG0179@1,COG0179@2 NA|NA|NA Q Fumarylacetoacetate (FAA) hydrolase family HOOMBAJD_02016 568703.LGG_01435 5.9e-205 719.9 Lactobacillaceae hisC 2.6.1.9 ko:K00817 ko00340,ko00350,ko00360,ko00400,ko00401,ko00960,ko01100,ko01110,ko01130,ko01230,map00340,map00350,map00360,map00400,map00401,map00960,map01100,map01110,map01130,map01230 M00026 R00694,R00734,R03243 RC00006,RC00888 ko00000,ko00001,ko00002,ko01000,ko01007 Bacteria 1TPUV@1239,3F466@33958,4HA1H@91061,COG0079@1,COG0079@2 NA|NA|NA E Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily HOOMBAJD_02017 568703.LGG_01436 6e-52 209.9 Lactobacillaceae hisE GO:0000105,GO:0000287,GO:0003674,GO:0003824,GO:0004636,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009605,GO:0009607,GO:0009987,GO:0016053,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019752,GO:0030312,GO:0034641,GO:0040007,GO:0043167,GO:0043169,GO:0043207,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044403,GO:0044419,GO:0044464,GO:0046394,GO:0046483,GO:0046872,GO:0050896,GO:0051701,GO:0051704,GO:0051707,GO:0052803,GO:0071704,GO:0071944,GO:0075136,GO:0075139,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 3.5.4.19,3.6.1.31,5.3.1.16 ko:K01523,ko:K01814,ko:K11755 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 M00026 R04035,R04037,R04640 RC00002,RC00945,RC01055 ko00000,ko00001,ko00002,ko01000 iSB619.SA_RS14110,iYO844.BSU34860 Bacteria 1VB6S@1239,3F7V5@33958,4HKDY@91061,COG0140@1,COG0140@2 NA|NA|NA E phosphoribosyl-ATP diphosphatase activity HOOMBAJD_02018 568703.LGG_01437 1.8e-56 224.9 Lactobacillaceae hisI GO:0000105,GO:0003674,GO:0003824,GO:0004635,GO:0004636,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016462,GO:0016787,GO:0016810,GO:0016814,GO:0016817,GO:0016818,GO:0018130,GO:0019238,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 3.5.4.19,3.5.4.25,3.6.1.31,5.3.1.16 ko:K01496,ko:K01497,ko:K01814,ko:K11755 ko00340,ko00740,ko00790,ko01100,ko01110,ko01230,ko02024,map00340,map00740,map00790,map01100,map01110,map01230,map02024 M00026,M00125 R00425,R04035,R04037,R04640 RC00002,RC00293,RC00945,RC01055,RC02504 ko00000,ko00001,ko00002,ko01000 iECNA114_1301.ECNA114_0880,iECW_1372.ECW_m2186,iEKO11_1354.EKO11_1768,iHN637.CLJU_RS05760,iSB619.SA_RS14110,iUMN146_1321.UM146_06665,iWFL_1372.ECW_m2186 Bacteria 1UYNA@1239,3F73W@33958,4HA9R@91061,COG0139@1,COG0139@2 NA|NA|NA E Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP HOOMBAJD_02019 568703.LGG_01438 1.6e-132 478.8 Lactobacillaceae hisF GO:0000105,GO:0000107,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009382,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0032991,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494,GO:1990234 3.5.4.19,3.6.1.31 ko:K01663,ko:K02500,ko:K11755 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 M00026 R04035,R04037,R04558 RC00002,RC00010,RC01055,RC01190,RC01943 ko00000,ko00001,ko00002,ko01000 iECO111_1330.ECO111_2749,iEcolC_1368.EcolC_1617,iHN637.CLJU_RS05755,iLJ478.TM1036,iSB619.SA_RS14115,iYL1228.KPN_02481 Bacteria 1TP0W@1239,3F3XV@33958,4HAAM@91061,COG0107@1,COG0107@2 NA|NA|NA E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit HOOMBAJD_02020 568703.LGG_01439 1.5e-135 488.8 Lactobacillaceae hisA GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.16 ko:K01814 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 M00026 R04640 RC00945 ko00000,ko00001,ko00002,ko01000 iAF987.Gmet_0388 Bacteria 1V1IR@1239,3F5YT@33958,4HACP@91061,COG0106@1,COG0106@2 NA|NA|NA E 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase HOOMBAJD_02021 568703.LGG_01440 2.6e-112 411.4 Lactobacillaceae hisH ko:K02501 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 M00026 R04558 RC00010,RC01190,RC01943 ko00000,ko00001,ko00002,ko01000 Bacteria 1TQT0@1239,3FBCG@33958,4HHSP@91061,COG0118@1,COG0118@2 NA|NA|NA E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR HOOMBAJD_02022 568703.LGG_01441 6.3e-105 386.7 Lactobacillaceae hisB GO:0000105,GO:0003674,GO:0003824,GO:0004401,GO:0004424,GO:0005488,GO:0005515,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0040007,GO:0042578,GO:0042802,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.23,2.6.1.9,3.1.3.15,4.2.1.19 ko:K00013,ko:K00817,ko:K01089,ko:K01693 ko00340,ko00350,ko00360,ko00400,ko00401,ko00960,ko01100,ko01110,ko01130,ko01230,map00340,map00350,map00360,map00400,map00401,map00960,map01100,map01110,map01130,map01230 M00026 R00694,R00734,R01158,R01163,R03012,R03013,R03243,R03457 RC00006,RC00017,RC00099,RC00242,RC00463,RC00888,RC00932 ko00000,ko00001,ko00002,ko01000,ko01007 iECO111_1330.ECO111_2746,iECS88_1305.ECS88_2121,iJN746.PP_0289,iLJ478.TM1039,iSB619.SA_RS14130,iUMNK88_1353.UMNK88_2570 Bacteria 1TRH7@1239,3F4TQ@33958,4HCFG@91061,COG0131@1,COG0131@2 NA|NA|NA E imidazoleglycerol-phosphate dehydratase HOOMBAJD_02023 568703.LGG_01443 2.3e-224 784.6 Lactobacillaceae hisD GO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019752,GO:0030145,GO:0034641,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046872,GO:0046914,GO:0052803,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.23,1.1.1.308 ko:K00013,ko:K15509 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 M00026 R01158,R01163,R03012 RC00099,RC00242,RC00463 ko00000,ko00001,ko00002,ko01000 Bacteria 1TPAW@1239,3F40P@33958,4H9XK@91061,COG0141@1,COG0141@2 NA|NA|NA E Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine HOOMBAJD_02024 568703.LGG_01444 1.6e-109 402.1 Lactobacillaceae hisG GO:0000105,GO:0003674,GO:0003824,GO:0003879,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.17 ko:K00765,ko:K02502 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 M00026 R01071 RC02819,RC03200 ko00000,ko00001,ko00002,ko01000 Bacteria 1TSVZ@1239,3F4WT@33958,4H9MH@91061,COG0040@1,COG0040@2 NA|NA|NA F Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity HOOMBAJD_02025 568703.LGG_01445 1e-215 755.7 Lactobacillaceae hisZ 2.4.2.17,6.1.1.21 ko:K00765,ko:K01892,ko:K02502 ko00340,ko00970,ko01100,ko01110,ko01230,map00340,map00970,map01100,map01110,map01230 M00026,M00359,M00360 R01071,R03655 RC00055,RC00523,RC02819,RC03200 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Bacteria 1TPZZ@1239,3F4W1@33958,4HBBA@91061,COG3705@1,COG3705@2 NA|NA|NA E Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine HOOMBAJD_02026 568703.LGG_01446 2.6e-205 721.1 Lactobacillaceae hisC 2.6.1.9 ko:K00817 ko00340,ko00350,ko00360,ko00400,ko00401,ko00960,ko01100,ko01110,ko01130,ko01230,map00340,map00350,map00360,map00400,map00401,map00960,map01100,map01110,map01130,map01230 M00026 R00694,R00734,R03243 RC00006,RC00888 ko00000,ko00001,ko00002,ko01000,ko01007 Bacteria 1TPUV@1239,3F97T@33958,4HA1H@91061,COG0079@1,COG0079@2 NA|NA|NA E Cys/Met metabolism PLP-dependent enzyme HOOMBAJD_02027 568703.LGG_01447 1.5e-100 372.1 Lactobacillaceae 3.6.1.13 ko:K01515 ko00230,map00230 R01054 RC00002 ko00000,ko00001,ko01000 Bacteria 1VXC7@1239,3F45R@33958,4HX58@91061,COG0494@1,COG0494@2 NA|NA|NA L Belongs to the Nudix hydrolase family HOOMBAJD_02028 568703.LGG_01448 3.2e-161 574.3 Lactobacillaceae degV Bacteria 1TRM7@1239,3F40W@33958,4HBIR@91061,COG1307@1,COG1307@2 NA|NA|NA S EDD domain protein, DegV family HOOMBAJD_02029 543734.LCABL_26300 1.7e-06 60.5 Lactobacillaceae Bacteria 1U82X@1239,2BQ3C@1,32IXT@2,3FAGQ@33958,4II0B@91061 NA|NA|NA HOOMBAJD_02030 568703.LGG_01450 0.0 1119.0 Lactobacillaceae FbpA ko:K12341 ko03070,map03070 ko00000,ko00001,ko02044 1.B.40.1.1 Bacteria 1TQ8A@1239,3F3PS@33958,4H9UF@91061,COG1293@1,COG1293@2 NA|NA|NA K Fibronectin-binding protein HOOMBAJD_02031 568703.LGG_01451 6.2e-51 206.5 Lactobacillaceae Bacteria 1VJNA@1239,3F7BG@33958,4I1AJ@91061,COG1694@1,COG1694@2 NA|NA|NA S MazG-like family HOOMBAJD_02032 568703.LGG_01452 5.9e-192 676.8 Lactobacillaceae pfoS ko:K07035 ko00000 Bacteria 1TS5F@1239,3FCB4@33958,4HAK5@91061,COG3641@1,COG3641@2 NA|NA|NA S Phosphotransferase system, EIIC HOOMBAJD_02033 543734.LCABL_16640 1.5e-171 609.0 Lactobacillaceae pfoS ko:K07035 ko00000 Bacteria 1TS5F@1239,3FCB4@33958,4HAK5@91061,COG3641@1,COG3641@2 NA|NA|NA S Phosphotransferase system, EIIC HOOMBAJD_02034 543734.LCABL_16650 1.5e-164 585.5 Lactobacillaceae panE 1.1.1.169 ko:K00077 ko00770,ko01100,ko01110,map00770,map01100,map01110 M00119 R02472 RC00726 ko00000,ko00001,ko00002,ko01000 Bacteria 1UM1M@1239,3FCCS@33958,4HBPD@91061,COG1893@1,COG1893@2 NA|NA|NA H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid HOOMBAJD_02035 543734.LCABL_16660 1.1e-181 642.9 Lactobacillaceae bfmBB 2.3.1.168,2.3.1.61 ko:K00658,ko:K09699 ko00020,ko00280,ko00310,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00280,map00310,map00640,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00032,M00036 R02570,R02571,R02662,R03174,R04097,R08549,R10998 RC00004,RC02727,RC02833,RC02870 br01601,ko00000,ko00001,ko00002,ko01000 Bacteria 1TQSH@1239,3F7YX@33958,4HBSU@91061,COG0508@1,COG0508@2 NA|NA|NA C 2-oxoacid dehydrogenases acyltransferase (catalytic domain) HOOMBAJD_02036 543734.LCABL_16670 9.1e-173 612.8 Lactobacillaceae bfmBAB 1.2.4.1,1.2.4.4 ko:K00162,ko:K00167,ko:K21417 ko00010,ko00020,ko00280,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00280,map00620,map00640,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230 M00036,M00307 R00014,R00209,R01699,R03270,R07599,R07600,R07601,R07602,R07603,R07604,R10996,R10997 RC00004,RC00027,RC00627,RC02742,RC02743,RC02744,RC02882,RC02883,RC02949,RC02953 br01601,ko00000,ko00001,ko00002,ko01000 iYO844.BSU24040 Bacteria 1TP3J@1239,3F4TD@33958,4HAP6@91061,COG0022@1,COG0022@2 NA|NA|NA C Transketolase, pyrimidine binding domain HOOMBAJD_02037 543734.LCABL_16680 3.1e-173 614.4 Lactobacillaceae bfmBAA 1.2.4.4 ko:K00166 ko00280,ko00640,ko01100,ko01110,ko01130,map00280,map00640,map01100,map01110,map01130 M00036 R07599,R07600,R07601,R07602,R07603,R07604,R10996,R10997 RC00027,RC00627,RC02743,RC02883,RC02949,RC02953 br01601,ko00000,ko00001,ko00002,ko01000 iSB619.SA_RS07640 Bacteria 1TQDG@1239,3F55B@33958,4HBEQ@91061,COG1071@1,COG1071@2 NA|NA|NA C Dehydrogenase E1 component HOOMBAJD_02038 543734.LCABL_16690 1.7e-228 798.5 Lactobacillaceae lpdA GO:0000166,GO:0003674,GO:0003824,GO:0004148,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008150,GO:0008152,GO:0009987,GO:0015036,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0016667,GO:0016668,GO:0019725,GO:0019899,GO:0032991,GO:0035375,GO:0036094,GO:0040007,GO:0042592,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0045254,GO:0045454,GO:0048037,GO:0050660,GO:0050662,GO:0050789,GO:0050794,GO:0051287,GO:0055114,GO:0065007,GO:0065008,GO:0070404,GO:0071944,GO:0097159,GO:1901265,GO:1901363,GO:1902494,GO:1990204 1.8.1.4 ko:K00382 ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00036,M00307,M00532 R00209,R01221,R01698,R03815,R07618,R08549 RC00004,RC00022,RC00583,RC02742,RC02833,RC02834 br01601,ko00000,ko00001,ko00002,ko01000,ko04147 Bacteria 1TP1W@1239,3F5YW@33958,4H9Z5@91061,COG1249@1,COG1249@2 NA|NA|NA C 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HOOMBAJD_02039 543734.LCABL_16700 4.1e-177 627.5 Lactobacillaceae buk 2.7.2.7 ko:K00929 ko00650,ko01100,map00650,map01100 R01688 RC00002,RC00043 ko00000,ko00001,ko01000 Bacteria 1TPKE@1239,3F6TG@33958,4H9QV@91061,COG3426@1,COG3426@2 NA|NA|NA C Acetokinase family HOOMBAJD_02040 543734.LCABL_16710 1.3e-107 396.0 Lactobacillaceae pta 2.3.1.19,2.3.1.8 ko:K00625,ko:K00634,ko:K13788 ko00430,ko00620,ko00640,ko00650,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00650,map00680,map00720,map01100,map01120,map01200 M00357,M00579 R00230,R00921,R01174 RC00004,RC02746,RC02816 ko00000,ko00001,ko00002,ko01000 Bacteria 1TRQU@1239,3F7SC@33958,4HBSK@91061,COG0280@1,COG0280@2 NA|NA|NA C Phosphate acetyl/butaryl transferase HOOMBAJD_02041 568703.LGG_01453 9e-113 412.9 Lactobacillaceae pyrE 2.4.2.10,4.1.1.23 ko:K00762,ko:K01591,ko:K13421 ko00240,ko00983,ko01100,map00240,map00983,map01100 M00051 R00965,R01870,R08231 RC00063,RC00409,RC00611 ko00000,ko00001,ko00002,ko01000 iYO844.BSU15560 Bacteria 1V1BZ@1239,3F487@33958,4HFV7@91061,COG0461@1,COG0461@2 NA|NA|NA F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) HOOMBAJD_02042 568703.LGG_01454 7.2e-127 459.9 Lactobacillaceae pyrF GO:0003674,GO:0003824,GO:0004590,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0015949,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019856,GO:0034641,GO:0034654,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046112,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.23 ko:K01591 ko00240,ko01100,map00240,map01100 M00051 R00965 RC00409 ko00000,ko00001,ko00002,ko01000 iECO103_1326.ECO103_1444,iECSF_1327.ECSF_1264,iSFV_1184.SFV_1294,iSF_1195.SF1285,iSFxv_1172.SFxv_1457,iS_1188.S1368,ic_1306.c1750 Bacteria 1TPPH@1239,3F47Y@33958,4HAJ2@91061,COG0284@1,COG0284@2 NA|NA|NA F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) HOOMBAJD_02043 568703.LGG_01455 1.9e-150 538.5 Lactobacillaceae pyrD GO:0003674,GO:0003824,GO:0004152,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016627,GO:0016635,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019856,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046112,GO:0046390,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.3.1.14,1.3.98.1 ko:K00226,ko:K02823,ko:K17828 ko00240,ko01100,map00240,map01100 M00051 R01867,R01869 RC00051 ko00000,ko00001,ko00002,ko01000 iYO844.BSU15540 Bacteria 1TPFV@1239,3F4PJ@33958,4HA5H@91061,COG0167@1,COG0167@2 NA|NA|NA F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily HOOMBAJD_02044 568703.LGG_01456 0.0 2053.5 Lactobacillaceae carB GO:0000050,GO:0003674,GO:0003824,GO:0004087,GO:0004088,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016884,GO:0019627,GO:0019752,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.5.5 ko:K01955 ko00240,ko00250,ko01100,map00240,map00250,map01100 M00051 R00256,R00575,R01395,R10948,R10949 RC00002,RC00010,RC00043,RC02750,RC02798,RC03314 ko00000,ko00001,ko00002,ko01000 Bacteria 1TPID@1239,3F3MD@33958,4HAEY@91061,COG0458@1,COG0458@2 NA|NA|NA F Carbamoyl-phosphate synthase HOOMBAJD_02045 568703.LGG_01457 1e-209 735.7 Lactobacillaceae carA GO:0000050,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005951,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0019627,GO:0019752,GO:0032991,GO:0034641,GO:0040007,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494 6.3.5.5 ko:K01955,ko:K01956 ko00240,ko00250,ko01100,map00240,map00250,map01100 M00051 R00256,R00575,R01395,R10948,R10949 RC00002,RC00010,RC00043,RC02750,RC02798,RC03314 ko00000,ko00001,ko00002,ko01000 iNJ661.Rv1383,iYO844.BSU15510 Bacteria 1TQ8N@1239,3F43R@33958,4H9Z0@91061,COG0505@1,COG0505@2 NA|NA|NA F Carbamoyl-phosphate synthetase glutamine chain HOOMBAJD_02046 568703.LGG_01458 1.4e-237 828.6 Lactobacillaceae pyrC GO:0003674,GO:0003824,GO:0004038,GO:0004151,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006144,GO:0006145,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016787,GO:0016810,GO:0016812,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0040007,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046113,GO:0046390,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.5.2.3 ko:K01465 ko00240,ko01100,map00240,map01100 M00051 R01993 RC00632 ko00000,ko00001,ko00002,ko01000 Bacteria 1TPQM@1239,3F3S3@33958,4HA90@91061,COG0044@1,COG0044@2 NA|NA|NA F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily HOOMBAJD_02047 568703.LGG_01459 7.3e-180 636.3 Lactobacillaceae pyrB GO:0003674,GO:0003824,GO:0004070,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016020,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0030312,GO:0034641,GO:0034654,GO:0040007,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0071944,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.3.2 ko:K00608,ko:K00609 ko00240,ko00250,ko01100,map00240,map00250,map01100 M00051 R01397 RC00064,RC02850 ko00000,ko00001,ko00002,ko01000 iYO844.BSU15490 Bacteria 1TQ96@1239,3F4BQ@33958,4H9M6@91061,COG0540@1,COG0540@2 NA|NA|NA F Belongs to the ATCase OTCase family HOOMBAJD_02048 568703.LGG_01460 2.2e-235 821.2 Lactobacillaceae pyrP ko:K02824,ko:K16169 ko00000,ko02000 2.A.40.1.1,2.A.40.1.2,2.A.40.3.1 iLJ478.TM0819 Bacteria 1TQKX@1239,3F3UJ@33958,4HAEU@91061,COG2233@1,COG2233@2 NA|NA|NA F Permease HOOMBAJD_02049 568703.LGG_01461 1.3e-90 339.0 Lactobacillaceae pyrR GO:0003674,GO:0003700,GO:0003824,GO:0004845,GO:0005575,GO:0005618,GO:0005623,GO:0006139,GO:0006220,GO:0006221,GO:0006355,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008655,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019637,GO:0019693,GO:0030312,GO:0031323,GO:0031326,GO:0034641,GO:0034654,GO:0043094,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044464,GO:0046390,GO:0046483,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0055086,GO:0060255,GO:0065007,GO:0071704,GO:0071944,GO:0072527,GO:0072528,GO:0080090,GO:0090407,GO:0140110,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1903506,GO:2000112,GO:2001141 2.4.2.9 ko:K02825 ko00240,ko01100,map00240,map01100 R00966 RC00063 ko00000,ko00001,ko01000,ko03000 iHN637.CLJU_RS05275 Bacteria 1V3GV@1239,3F4SR@33958,4HGYE@91061,COG2065@1,COG2065@2 NA|NA|NA F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant HOOMBAJD_02051 568703.LGG_01463 3e-170 604.4 Lactobacillaceae rluD GO:0000027,GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022607,GO:0022613,GO:0022618,GO:0031118,GO:0034470,GO:0034622,GO:0034641,GO:0034660,GO:0042254,GO:0042255,GO:0042273,GO:0043170,GO:0043412,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:1901360 5.4.99.23 ko:K06180 ko00000,ko01000,ko03009 iE2348C_1286.E2348C_2868,iECED1_1282.ECED1_3035,iECSF_1327.ECSF_2432 Bacteria 1TPCM@1239,3F3P6@33958,4HBG2@91061,COG0564@1,COG0564@2 NA|NA|NA J Responsible for synthesis of pseudouridine from uracil HOOMBAJD_02052 568703.LGG_01464 1.2e-81 309.3 Lactobacillaceae lspA 3.4.23.36 ko:K03101 ko03060,map03060 ko00000,ko00001,ko01000,ko01002 Bacteria 1VA9R@1239,3F66R@33958,4HIR4@91061,COG0597@1,COG0597@2 NA|NA|NA MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins HOOMBAJD_02053 568703.LGG_01465 0.0 1099.3 Lactobacillaceae fhs GO:0003674,GO:0003824,GO:0004329,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006144,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009112,GO:0009113,GO:0009256,GO:0009257,GO:0009396,GO:0009987,GO:0016053,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0016874,GO:0016879,GO:0018130,GO:0019238,GO:0019438,GO:0019752,GO:0034641,GO:0042398,GO:0042440,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046112,GO:0046148,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:0072522,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.3 ko:K01938 ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200 M00140,M00377 R00943 RC00026,RC00111 ko00000,ko00001,ko00002,ko01000 Bacteria 1TP6N@1239,3F3U6@33958,4HA2X@91061,COG2759@1,COG2759@2 NA|NA|NA F Belongs to the formate--tetrahydrofolate ligase family HOOMBAJD_02054 568703.LGG_01466 1.4e-63 248.8 Lactobacillaceae Bacteria 1UUT0@1239,2BF1V@1,328TS@2,3F9TN@33958,4IHGJ@91061 NA|NA|NA S Family of unknown function (DUF5322) HOOMBAJD_02055 568703.LGG_01467 2.5e-68 264.6 Lactobacillaceae rnhA 3.1.26.4 ko:K03469 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 Bacteria 1VH2B@1239,3F7JC@33958,4HIY9@91061,COG0328@1,COG0328@2 NA|NA|NA L Ribonuclease HI HOOMBAJD_02056 568703.LGG_01468 5.7e-109 400.2 Lactobacillaceae XK27_02070 ko:K07078 ko00000 Bacteria 1V1CR@1239,3F576@33958,4HD6W@91061,COG3560@1,COG3560@2 NA|NA|NA S Nitroreductase family HOOMBAJD_02057 568703.LGG_01469 7.5e-280 969.1 Lactobacillaceae cls GO:0003674,GO:0003824,GO:0005575,GO:0006629,GO:0006644,GO:0006650,GO:0006655,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0008808,GO:0009058,GO:0009987,GO:0016020,GO:0016740,GO:0016772,GO:0016780,GO:0019637,GO:0030572,GO:0032048,GO:0032049,GO:0032502,GO:0043934,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0045017,GO:0046471,GO:0046474,GO:0046486,GO:0071704,GO:0090407,GO:1901576 ko:K06131 ko00564,ko01100,map00564,map01100 R07390 RC00017 ko00000,ko00001,ko01000 Bacteria 1TPKY@1239,3F3SF@33958,4H9TI@91061,COG1502@1,COG1502@2 NA|NA|NA I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol HOOMBAJD_02058 568703.LGG_01471 3.7e-54 217.2 Lactobacillaceae Bacteria 1U6RT@1239,29PM1@1,30AJ7@2,3F8DQ@33958,4IGJ9@91061 NA|NA|NA HOOMBAJD_02059 568703.LGG_01472 5.7e-272 943.0 Lactobacillaceae Bacteria 1TVHZ@1239,2C9BC@1,2ZI2Q@2,3F96P@33958,4I07N@91061 NA|NA|NA K Mga helix-turn-helix domain HOOMBAJD_02060 568703.LGG_01473 4.5e-38 163.3 Lactobacillaceae nrdH GO:0003674,GO:0003824,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009893,GO:0009987,GO:0016491,GO:0019222,GO:0019725,GO:0022900,GO:0042592,GO:0043085,GO:0044093,GO:0044237,GO:0045454,GO:0048518,GO:0050789,GO:0050790,GO:0050794,GO:0051341,GO:0051353,GO:0055114,GO:0065007,GO:0065008,GO:0065009 ko:K06191 ko00000 Bacteria 1VEFX@1239,3F874@33958,4HNUX@91061,COG0695@1,COG0695@2 NA|NA|NA O Glutaredoxin HOOMBAJD_02061 568703.LGG_01474 0.0 1459.1 Lactobacillaceae nrdE 1.17.4.1 ko:K00525 ko00230,ko00240,ko01100,map00230,map00240,map01100 M00053 R02017,R02018,R02019,R02024 RC00613 ko00000,ko00001,ko00002,ko01000,ko03400 iYO844.BSU17380 Bacteria 1TPFH@1239,3F3XG@33958,4H9X0@91061,COG0209@1,COG0209@2 NA|NA|NA F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides HOOMBAJD_02062 568703.LGG_01475 4e-189 667.2 Lactobacillaceae nrdF 1.17.4.1 ko:K00526 ko00230,ko00240,ko01100,map00230,map00240,map01100 M00053 R02017,R02018,R02019,R02024 RC00613 ko00000,ko00001,ko00002,ko01000,ko03400 Bacteria 1TQTH@1239,3F3P1@33958,4H9WX@91061,COG0208@1,COG0208@2 NA|NA|NA F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides HOOMBAJD_02063 568703.LGG_01476 9.1e-164 582.8 Lactobacillaceae Bacteria 1TP77@1239,3F3VP@33958,4HAZB@91061,COG0583@1,COG0583@2 NA|NA|NA K Transcriptional regulator HOOMBAJD_02064 568703.LGG_01478 0.0 1279.2 Lactobacillaceae pepO 3.4.24.71 ko:K01415,ko:K07386 ko00000,ko01000,ko01002,ko04147 Bacteria 1TQTA@1239,3F4CX@33958,4HDSF@91061,COG3590@1,COG3590@2 NA|NA|NA O Peptidase family M13 HOOMBAJD_02065 568703.LGG_01479 4.8e-193 680.2 Lactobacillaceae lplA 6.3.1.20 ko:K03800 ko00785,ko01100,map00785,map01100 R07770,R07771,R11143 RC00043,RC00070,RC00090,RC00992,RC02896 ko00000,ko00001,ko01000 Bacteria 1TQ5U@1239,3F4UZ@33958,4H9P6@91061,COG0095@1,COG0095@2 NA|NA|NA H Lipoate-protein ligase HOOMBAJD_02066 568703.LGG_01480 5.6e-33 146.4 Lactobacillaceae Bacteria 1U71A@1239,2CDEF@1,30AS2@2,3F8UP@33958,4IGVR@91061 NA|NA|NA HOOMBAJD_02067 568703.LGG_01481 7.8e-174 616.3 Lactobacillaceae pdxB 1.1.1.399,1.1.1.95 ko:K00058 ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230 M00020 R01513 RC00031 ko00000,ko00001,ko00002,ko01000,ko04147 Bacteria 1TSDK@1239,3F4DF@33958,4HAW5@91061,COG0111@1,COG0111@2 NA|NA|NA EH D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain HOOMBAJD_02068 568703.LGG_01482 1.4e-217 761.9 Lactobacillaceae rlmL GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0008990,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016423,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.173,2.1.1.264 ko:K07444,ko:K12297 R07234 RC00003 ko00000,ko01000,ko03009 Bacteria 1TP0X@1239,3F3NZ@33958,4HBKY@91061,COG0116@1,COG0116@2 NA|NA|NA L Belongs to the methyltransferase superfamily HOOMBAJD_02070 568703.LGG_01484 1.8e-66 258.5 Lactobacillaceae gpsB ko:K04074 ko00000,ko03036 Bacteria 1VEQ4@1239,3F6VZ@33958,4HNP1@91061,COG3599@1,COG3599@2 NA|NA|NA D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation HOOMBAJD_02071 568703.LGG_01485 1.9e-106 391.7 Lactobacillaceae ypsA Bacteria 1V6SM@1239,3F4MR@33958,4HJGM@91061,COG4474@1,COG4474@2 NA|NA|NA S Belongs to the UPF0398 family HOOMBAJD_02072 568703.LGG_01486 1.5e-120 438.7 Lactobacillaceae recU GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360 ko:K03700 ko00000,ko03400 Bacteria 1V3S4@1239,3F4DG@33958,4HGZ7@91061,COG3331@1,COG3331@2 NA|NA|NA L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation HOOMBAJD_02073 568703.LGG_01487 0.0 1333.9 Lactobacillaceae ponA GO:0005575,GO:0005576 2.4.1.129,3.4.16.4 ko:K03693,ko:K05365,ko:K05366,ko:K12555,ko:K21464 ko00550,ko01100,ko01501,map00550,map01100,map01501 R04519 RC00005,RC00049 ko00000,ko00001,ko01000,ko01003,ko01011 GT51 Bacteria 1TPM5@1239,3F424@33958,4H9SA@91061,COG0744@1,COG0744@2 NA|NA|NA M penicillin-binding protein 1A HOOMBAJD_02074 568703.LGG_01488 1.5e-85 322.0 Lactobacillaceae comEB 3.5.4.12 ko:K01493 ko00240,ko01100,map00240,map01100 M00429 R01663 RC00074 ko00000,ko00001,ko00002,ko01000,ko02044 Bacteria 1V3PU@1239,3F6BF@33958,4HCDG@91061,COG2131@1,COG2131@2 NA|NA|NA F ComE operon protein 2 HOOMBAJD_02075 568703.LGG_01489 9.7e-115 419.5 Lactobacillaceae nth 4.2.99.18 ko:K10773 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Bacteria 1TRAK@1239,3F42U@33958,4HATD@91061,COG0177@1,COG0177@2 NA|NA|NA L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate HOOMBAJD_02076 568703.LGG_01490 6.2e-111 406.8 Lactobacillaceae dnaD ko:K02086 ko00000 Bacteria 1V283@1239,3F4FF@33958,4HFP3@91061,COG3935@1,COG3935@2 NA|NA|NA L DnaD domain protein HOOMBAJD_02077 568703.LGG_01491 1.2e-257 895.2 Lactobacillaceae asnS GO:0003674,GO:0003824,GO:0004812,GO:0004816,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006421,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.22 ko:K01893 ko00970,map00970 M00359,M00360 R03648 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Bacteria 1TP38@1239,3F4EK@33958,4H9YH@91061,COG0017@1,COG0017@2 NA|NA|NA J Asparaginyl-tRNA synthetase HOOMBAJD_02078 568703.LGG_01492 2.4e-220 771.2 Lactobacillaceae aspB GO:0003674,GO:0003824,GO:0008483,GO:0016740,GO:0016769,GO:0047297 2.6.1.1,2.6.1.14 ko:K00812,ko:K22457 ko00220,ko00250,ko00270,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230 R00355,R00694,R00734,R00896,R01346,R02433,R02619,R05052 RC00006,RC00025 ko00000,ko00001,ko01000,ko01007 iHN637.CLJU_RS06550 Bacteria 1TP0J@1239,3F3MX@33958,4HA13@91061,COG0436@1,COG0436@2 NA|NA|NA E Aminotransferase HOOMBAJD_02079 568703.LGG_01493 2.1e-85 321.6 Lactobacillaceae ypmB Bacteria 1VA2H@1239,3F4MM@33958,4HNMM@91061,COG5353@1,COG5353@2 NA|NA|NA S Protein conserved in bacteria HOOMBAJD_02080 568703.LGG_01495 0.0 1809.7 Lactobacillaceae dinG GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008408,GO:0009058,GO:0009059,GO:0009360,GO:0009987,GO:0016020,GO:0016787,GO:0016788,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0042575,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0044776,GO:0045004,GO:0045005,GO:0046483,GO:0050896,GO:0051716,GO:0061695,GO:0071704,GO:0071944,GO:0090304,GO:0090305,GO:1901360,GO:1901576,GO:1902494,GO:1990234 2.7.7.7,3.6.4.12 ko:K02342,ko:K03722 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Bacteria 1TQHQ@1239,3F4KA@33958,4HB2Y@91061,COG0847@1,COG0847@2,COG1199@1,COG1199@2 NA|NA|NA L helicase involved in DNA repair and perhaps also replication HOOMBAJD_02081 568703.LGG_01496 0.0 2364.3 Lactobacillaceae addA 3.6.4.12 ko:K16898 ko00000,ko01000,ko03400 Bacteria 1TQ35@1239,3F3Z0@33958,4HA64@91061,COG1074@1,COG1074@2 NA|NA|NA L ATP-dependent helicase nuclease subunit A HOOMBAJD_02082 568703.LGG_01497 0.0 2292.3 Lactobacillaceae rexB GO:0003674,GO:0003678,GO:0003824,GO:0004003,GO:0004386,GO:0004518,GO:0004519,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016788,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032392,GO:0032508,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051276,GO:0051716,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0140097,GO:1901360 3.1.21.3,3.6.4.12 ko:K01153,ko:K16899 ko00000,ko01000,ko02048,ko03400 Bacteria 1TQJW@1239,3F3RS@33958,4HAY6@91061,COG3857@1,COG3857@2 NA|NA|NA L The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity HOOMBAJD_02083 568703.LGG_01498 1.2e-166 592.4 Lactobacillaceae mvk 1.1.1.88,2.3.3.10,2.7.1.36 ko:K00054,ko:K00869,ko:K01641 ko00072,ko00280,ko00650,ko00900,ko01100,ko01110,ko01130,ko04146,map00072,map00280,map00650,map00900,map01100,map01110,map01130,map04146 M00088,M00095 R01978,R02081,R02245 RC00002,RC00004,RC00017,RC00503,RC00644 ko00000,ko00001,ko00002,ko01000 Bacteria 1TT5C@1239,3F3TW@33958,4HAQQ@91061,COG1577@1,COG1577@2 NA|NA|NA I mevalonate kinase HOOMBAJD_02084 568703.LGG_01499 1.6e-177 628.6 Lactobacillaceae mvaD 4.1.1.33 ko:K01597 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 M00095 R01121 RC00453 ko00000,ko00001,ko00002,ko01000 Bacteria 1TQXR@1239,3F4B5@33958,4HAM6@91061,COG3407@1,COG3407@2 NA|NA|NA I diphosphomevalonate decarboxylase HOOMBAJD_02085 568703.LGG_01500 3.1e-195 687.6 Lactobacillaceae fni 1.1.1.88,5.3.3.2 ko:K00054,ko:K01823 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 M00095,M00096,M00364,M00365,M00366,M00367 R01123,R02081 RC00004,RC00455,RC00644 ko00000,ko00001,ko00002,ko01000 Bacteria 1TQZ3@1239,3F3UY@33958,4HAMV@91061,COG1304@1,COG1304@2 NA|NA|NA C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP) HOOMBAJD_02086 568703.LGG_01501 8e-257 892.5 Lactobacillaceae rsmF GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008173,GO:0008649,GO:0008757,GO:0009383,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.176,2.1.1.178 ko:K03500,ko:K11392 ko00000,ko01000,ko03009 Bacteria 1TPGQ@1239,3F492@33958,4HCHQ@91061,COG0144@1,COG0144@2,COG3270@1,COG3270@2 NA|NA|NA J NOL1 NOP2 sun family protein HOOMBAJD_02087 568703.LGG_01502 1.8e-173 615.1 Lactobacillaceae Bacteria 1VNCY@1239,2EPHD@1,33H40@2,3F495@33958,4HYY7@91061 NA|NA|NA HOOMBAJD_02088 568703.LGG_01504 1e-139 502.7 Lactobacillaceae Bacteria 1VQQ8@1239,2E39Q@1,32Y99@2,3F4UX@33958,4HRY1@91061 NA|NA|NA HOOMBAJD_02089 568703.LGG_01505 9.7e-61 239.2 Lactobacillaceae yitW ko:K02612 ko00360,ko01120,map00360,map01120 R09838 RC02690 ko00000,ko00001 Bacteria 1V9YV@1239,3F7D5@33958,4HKC6@91061,COG2151@1,COG2151@2 NA|NA|NA S Iron-sulfur cluster assembly protein HOOMBAJD_02090 568703.LGG_01506 7.3e-26 122.5 Lactobacillaceae dmpI GO:0003674,GO:0003824,GO:0006725,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0044237 5.3.2.6 ko:K01821 ko00362,ko00621,ko00622,ko01100,ko01120,ko01220,map00362,map00621,map00622,map01100,map01120,map01220 M00569 R03966,R05389 RC01040,RC01355 ko00000,ko00001,ko00002,ko01000 Bacteria 1VKD5@1239,3F83T@33958,4HRBS@91061,COG1942@1,COG1942@2 NA|NA|NA G Belongs to the 4-oxalocrotonate tautomerase family HOOMBAJD_02091 568703.LGG_01507 1.9e-270 937.9 Bacteria ko:K06147,ko:K06148 ko00000,ko02000 3.A.1,3.A.1.106,3.A.1.109,3.A.1.21 Bacteria COG1132@1,COG1132@2 NA|NA|NA V (ABC) transporter HOOMBAJD_02092 568703.LGG_01508 2.6e-308 1063.9 Bacilli Bacteria 1TRCZ@1239,4HCDT@91061,COG1132@1,COG1132@2 NA|NA|NA V ABC transporter transmembrane region HOOMBAJD_02093 568703.LGG_01509 2.8e-148 531.2 Lactobacillaceae yqfO GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 3.5.4.16 ko:K22391 ko00790,ko01100,map00790,map01100 M00126 R00428,R04639,R05046,R05048 RC00263,RC00294,RC00323,RC00945,RC01188 ko00000,ko00001,ko00002,ko01000 Bacteria 1TQ27@1239,3F3ZD@33958,4H9NY@91061,COG0327@1,COG0327@2 NA|NA|NA S Belongs to the GTP cyclohydrolase I type 2 NIF3 family HOOMBAJD_02094 568703.LGG_01510 2.3e-125 454.9 Lactobacillaceae trmK GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016426,GO:0016429,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.217 ko:K06967 ko00000,ko01000,ko03016 Bacteria 1V3I4@1239,3F4GT@33958,4HHIM@91061,COG2384@1,COG2384@2 NA|NA|NA S SAM-dependent methyltransferase HOOMBAJD_02095 568703.LGG_01511 4.1e-194 684.1 Lactobacillaceae sigA GO:0000988,GO:0000990,GO:0001098,GO:0001101,GO:0001108,GO:0001666,GO:0002791,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006355,GO:0006950,GO:0008150,GO:0009266,GO:0009405,GO:0009408,GO:0009410,GO:0009415,GO:0009628,GO:0009889,GO:0009891,GO:0009893,GO:0010035,GO:0010468,GO:0010556,GO:0010557,GO:0010565,GO:0010604,GO:0010628,GO:0016020,GO:0016987,GO:0019216,GO:0019217,GO:0019219,GO:0019222,GO:0019899,GO:0030312,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032879,GO:0032880,GO:0036293,GO:0040007,GO:0042221,GO:0043175,GO:0043254,GO:0044087,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050708,GO:0050789,GO:0050794,GO:0050896,GO:0051046,GO:0051049,GO:0051128,GO:0051171,GO:0051173,GO:0051223,GO:0051252,GO:0051254,GO:0051704,GO:0060255,GO:0062012,GO:0065007,GO:0070063,GO:0070201,GO:0070482,GO:0071944,GO:0080090,GO:0090087,GO:0097159,GO:0140110,GO:1901363,GO:1901700,GO:1902680,GO:1903506,GO:1903508,GO:1903530,GO:2000112,GO:2000142,GO:2001141 ko:K03086,ko:K03087 ko02026,ko05111,map02026,map05111 ko00000,ko00001,ko03021 Bacteria 1TPD6@1239,3F4CF@33958,4HB1H@91061,COG0568@1,COG0568@2 NA|NA|NA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth HOOMBAJD_02096 568703.LGG_01512 0.0 1152.9 Lactobacillaceae dnaG ko:K02316 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 Bacteria 1TQ0X@1239,3F3N1@33958,4HAG2@91061,COG0358@1,COG0358@2 NA|NA|NA L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication HOOMBAJD_02097 568703.LGG_01513 0.0 1292.3 Lactobacillaceae glyS GO:0003674,GO:0003824,GO:0004812,GO:0004820,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006426,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046983,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.14 ko:K01879,ko:K14164 ko00970,map00970 M00360 R03654 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 iAPECO1_1312.APECO1_2891,iE2348C_1286.E2348C_3810,iECABU_c1320.ECABU_c40010,iECED1_1282.ECED1_4242,iECH74115_1262.ECH74115_4934,iECNA114_1301.ECNA114_3710,iECOK1_1307.ECOK1_4005,iECP_1309.ECP_3661,iECS88_1305.ECS88_3976,iECSF_1327.ECSF_3393,iECSP_1301.ECSP_4554,iECs_1301.ECs4442,iG2583_1286.G2583_4300,iJN678.glyS,iUMN146_1321.UM146_17960,iUTI89_1310.UTI89_C4099,ic_1306.c4378 Bacteria 1TNZ7@1239,3F4G8@33958,4H9NT@91061,COG0751@1,COG0751@2 NA|NA|NA J Glycyl-tRNA synthetase beta subunit HOOMBAJD_02098 568703.LGG_01514 1.8e-175 621.7 Lactobacillaceae glyQ GO:0003674,GO:0003824,GO:0004812,GO:0004820,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016874,GO:0016875,GO:0044424,GO:0044444,GO:0044464,GO:0046983,GO:0140098,GO:0140101 6.1.1.14 ko:K01878,ko:K14164 ko00970,map00970 M00360 R03654 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 iAF1260.b3560,iAF987.Gmet_2942,iJO1366.b3560,iPC815.YPO4072,iY75_1357.Y75_RS19360 Bacteria 1TPW8@1239,3F3T8@33958,4HBCF@91061,COG0752@1,COG0752@2 NA|NA|NA J glycyl-tRNA synthetase alpha subunit HOOMBAJD_02099 568703.LGG_01545 1.7e-93 348.6 Lactobacillaceae 2.3.1.128,5.2.1.8 ko:K03768,ko:K03790 ko00000,ko01000,ko03009,ko03110 Bacteria 1V4ZB@1239,3FCAZ@33958,4HHG0@91061,COG1670@1,COG1670@2 NA|NA|NA J Acetyltransferase (GNAT) domain HOOMBAJD_02101 568703.LGG_01547 5.7e-124 450.3 Lactobacillaceae ko:K01990 M00254 ko00000,ko00002,ko02000 3.A.1 Bacteria 1TPZR@1239,3F7PH@33958,4HK33@91061,COG1131@1,COG1131@2 NA|NA|NA V ATPases associated with a variety of cellular activities HOOMBAJD_02102 568703.LGG_01548 6e-54 216.5 Lactobacillaceae Bacteria 1VZDC@1239,2C8G2@1,348DR@2,3F740@33958,4HZ47@91061 NA|NA|NA HOOMBAJD_02103 568703.LGG_01549 5.8e-149 533.5 Lactobacillaceae recO GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009295,GO:0009987,GO:0033554,GO:0034641,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043590,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360 ko:K03584 ko03440,map03440 ko00000,ko00001,ko03400 Bacteria 1UZ19@1239,3F56P@33958,4HAHI@91061,COG1381@1,COG1381@2 NA|NA|NA L Involved in DNA repair and RecF pathway recombination HOOMBAJD_02104 568703.LGG_01550 6.2e-168 596.7 Lactobacillaceae era GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006275,GO:0008150,GO:0008156,GO:0009889,GO:0009890,GO:0009892,GO:0010556,GO:0010558,GO:0010605,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019003,GO:0019219,GO:0019222,GO:0030174,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032297,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0045934,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051052,GO:0051053,GO:0051171,GO:0051172,GO:0051302,GO:0051781,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:0090329,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:2000104,GO:2000112,GO:2000113 ko:K03595,ko:K06883 ko00000,ko03009,ko03029 Bacteria 1TP3R@1239,3F3WQ@33958,4H9WF@91061,COG1159@1,COG1159@2 NA|NA|NA S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism HOOMBAJD_02105 568703.LGG_01551 1.8e-63 248.4 Lactobacillaceae cdd GO:0003674,GO:0003824,GO:0004126,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006213,GO:0006216,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009056,GO:0009116,GO:0009119,GO:0009164,GO:0009972,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0019239,GO:0019439,GO:0034641,GO:0034655,GO:0034656,GO:0042454,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046087,GO:0046131,GO:0046133,GO:0046135,GO:0046483,GO:0046700,GO:0046872,GO:0046914,GO:0055086,GO:0071704,GO:0072527,GO:0072529,GO:1901135,GO:1901136,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901657,GO:1901658 2.4.2.2,3.5.4.5 ko:K00756,ko:K01489 ko00240,ko00983,ko01100,map00240,map00983,map01100 R01570,R01876,R01878,R02296,R02484,R02485,R08221 RC00063,RC00074,RC00514 ko00000,ko00001,ko01000 iSB619.SA_RS07895,iYO844.BSU25300 Bacteria 1V6IP@1239,3F7RM@33958,4HIJ3@91061,COG0295@1,COG0295@2 NA|NA|NA F This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis HOOMBAJD_02106 568703.LGG_01552 1.5e-65 255.4 Lactobacillaceae dgkA 2.7.1.107,2.7.1.66 ko:K00887,ko:K00901 ko00550,ko00561,ko00564,ko01100,ko01110,ko04070,ko04072,ko05231,map00550,map00561,map00564,map01100,map01110,map04070,map04072,map05231 R02240,R05626 RC00002,RC00017 ko00000,ko00001,ko01000 iAF987.Gmet_2369,iSB619.SA_RS07900 Bacteria 1VEGR@1239,3F7DC@33958,4HNKN@91061,COG0818@1,COG0818@2 NA|NA|NA M Diacylglycerol kinase HOOMBAJD_02107 568703.LGG_01553 3.1e-83 314.3 Lactobacillaceae ybeY GO:0000469,GO:0000478,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0005488,GO:0006139,GO:0006355,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0016072,GO:0016151,GO:0016787,GO:0016788,GO:0016892,GO:0016894,GO:0019219,GO:0019222,GO:0019538,GO:0022613,GO:0030490,GO:0031323,GO:0031326,GO:0031554,GO:0031564,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042274,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043244,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1903506,GO:2000112,GO:2001141 2.6.99.2,3.5.4.5 ko:K01489,ko:K03474,ko:K03595,ko:K07042 ko00240,ko00750,ko00983,ko01100,map00240,map00750,map00983,map01100 M00124 R01878,R02485,R05838,R08221 RC00074,RC00514,RC01476 ko00000,ko00001,ko00002,ko01000,ko03009,ko03029 Bacteria 1V6BU@1239,3F516@33958,4HIIE@91061,COG0319@1,COG0319@2 NA|NA|NA S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA HOOMBAJD_02108 568703.LGG_01554 2.9e-179 634.4 Lactobacillaceae phoH GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K06217 ko00000 Bacteria 1TP35@1239,3F4E7@33958,4HBD5@91061,COG1702@1,COG1702@2 NA|NA|NA T phosphate starvation-inducible protein PhoH HOOMBAJD_02109 568703.LGG_01555 1.6e-68 265.4 Lactobacillaceae yqeY ko:K09117 ko00000 Bacteria 1V6F2@1239,3F6I0@33958,4HIQP@91061,COG1610@1,COG1610@2 NA|NA|NA S YqeY-like protein HOOMBAJD_02110 568703.LGG_01556 2.9e-21 107.1 Lactobacillaceae rpsU GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02970 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1VEHU@1239,3F81Y@33958,4HNPV@91061,COG0828@1,COG0828@2 NA|NA|NA J Belongs to the bacterial ribosomal protein bS21 family HOOMBAJD_02111 568703.LGG_01557 7.2e-155 553.1 Lactobacillaceae yqfL 2.7.11.33,2.7.4.28 ko:K09773 ko00000,ko01000 Bacteria 1TPG0@1239,3F3WK@33958,4HB0Q@91061,COG1806@1,COG1806@2 NA|NA|NA F Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation HOOMBAJD_02112 568703.LGG_01558 1.8e-167 595.1 Lactobacillaceae nfo GO:0003674,GO:0003824,GO:0003906,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008081,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016788,GO:0033554,GO:0034641,GO:0042578,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 3.1.21.2 ko:K01151 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Bacteria 1TP1D@1239,3F42I@33958,4HB4F@91061,COG0648@1,COG0648@2 NA|NA|NA L Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin HOOMBAJD_02113 568703.LGG_01559 4.4e-169 600.5 Lactobacillaceae yitT Bacteria 1TRBT@1239,3F3PH@33958,4HBPR@91061,COG1284@1,COG1284@2 NA|NA|NA S Uncharacterised 5xTM membrane BCR, YitT family COG1284 HOOMBAJD_02114 568703.LGG_01560 8.3e-81 306.2 Lactobacillaceae msrB 1.8.4.11,1.8.4.12 ko:K07305,ko:K12267 ko00000,ko01000 Bacteria 1UPN0@1239,3F6H4@33958,4HGWN@91061,COG0229@1,COG0229@2 NA|NA|NA O peptide methionine sulfoxide reductase HOOMBAJD_02115 568703.LGG_01561 0.0 1217.6 Lactobacillaceae aspS 6.1.1.12 ko:K01876 ko00970,map00970 M00359,M00360 R05577 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Bacteria 1TPCN@1239,3F4PE@33958,4HACD@91061,COG0173@1,COG0173@2 NA|NA|NA J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp) HOOMBAJD_02116 568703.LGG_01562 3.2e-242 844.0 Lactobacillaceae hisS 6.1.1.21 ko:K01892 ko00970,map00970 M00359,M00360 R03655 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Bacteria 1TP3D@1239,3F3M3@33958,4HAM2@91061,COG0124@1,COG0124@2 NA|NA|NA J histidyl-tRNA synthetase HOOMBAJD_02117 568703.LGG_01563 6.7e-268 929.5 Lactobacillaceae Bacteria 1VUTX@1239,2DV5N@1,33U6G@2,3FBQP@33958,4HVQT@91061 NA|NA|NA HOOMBAJD_02118 568703.LGG_01564 6.6e-159 566.6 Lactobacillaceae ko:K01990 M00254 ko00000,ko00002,ko02000 3.A.1 Bacteria 1TRJH@1239,3F52V@33958,4HFS1@91061,COG1131@1,COG1131@2 NA|NA|NA V ABC transporter HOOMBAJD_02119 568703.LGG_01565 9.1e-80 302.8 Lactobacillaceae Bacteria 1V5XZ@1239,3FCAY@33958,4HHN5@91061,COG0537@1,COG0537@2 NA|NA|NA FG adenosine 5'-monophosphoramidase activity HOOMBAJD_02120 568703.LGG_01566 2e-247 861.3 Lactobacillaceae lytH GO:0005575,GO:0005623,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464 3.5.1.28,6.1.1.12 ko:K01448,ko:K01876,ko:K21472 ko00970,ko01503,map00970,map01503 M00359,M00360,M00727 R04112,R05577 RC00055,RC00064,RC00141,RC00523 ko00000,ko00001,ko00002,ko01000,ko01002,ko01007,ko01011,ko03016,ko03029,ko03036 Bacteria 1UYPW@1239,3F4F4@33958,4HBVT@91061,COG0860@1,COG0860@2,COG3807@1,COG3807@2 NA|NA|NA M N-acetylmuramoyl-L-alanine amidase HOOMBAJD_02121 568703.LGG_01567 1.2e-114 419.1 Lactobacillaceae 3.1.3.18 ko:K01091,ko:K07025 ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130 R01334 RC00017 ko00000,ko00001,ko01000 Bacteria 1V3DR@1239,3F741@33958,4HGMU@91061,COG0546@1,COG0546@2 NA|NA|NA J HAD-hyrolase-like HOOMBAJD_02122 568703.LGG_01568 1e-75 289.3 Lactobacillaceae dtd GO:0002161,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051499,GO:0051500,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106026,GO:0106074,GO:0140098,GO:0140101,GO:1901360 ko:K07560 ko00000,ko01000,ko03016 Bacteria 1V6GH@1239,3F6GK@33958,4HINN@91061,COG1490@1,COG1490@2 NA|NA|NA J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality HOOMBAJD_02123 568703.LGG_01569 0.0 1477.2 Lactobacillaceae relA GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0008728,GO:0008893,GO:0009116,GO:0009117,GO:0009119,GO:0009150,GO:0009259,GO:0009605,GO:0009987,GO:0009991,GO:0015969,GO:0016020,GO:0016740,GO:0016772,GO:0016778,GO:0016787,GO:0016788,GO:0016794,GO:0019637,GO:0019693,GO:0030312,GO:0031667,GO:0033865,GO:0033875,GO:0034032,GO:0034035,GO:0034641,GO:0042278,GO:0042578,GO:0042594,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0046128,GO:0046483,GO:0050896,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:1901068,GO:1901135,GO:1901360,GO:1901564,GO:1901657 2.7.6.5 ko:K00951 ko00230,map00230 R00429 RC00002,RC00078 ko00000,ko00001,ko01000 iHN637.CLJU_RS16615,iYO844.BSU27600 Bacteria 1TNYZ@1239,3F44F@33958,4HBX7@91061,COG0317@1,COG0317@2 NA|NA|NA KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance HOOMBAJD_02124 568703.LGG_01570 5.3e-53 213.4 Lactobacillaceae Bacteria 1U70F@1239,2DKTI@1,30ARB@2,3F8T9@33958,4IGUR@91061 NA|NA|NA HOOMBAJD_02125 568703.LGG_01571 5e-128 463.8 Lactobacillaceae rsmE GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016436,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070042,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.193 ko:K09761 ko00000,ko01000,ko03009 Bacteria 1V1CT@1239,3F64Z@33958,4HH8P@91061,COG1385@1,COG1385@2 NA|NA|NA J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit HOOMBAJD_02126 568703.LGG_01572 1.1e-172 612.5 Lactobacillaceae prmA ko:K02687 ko00000,ko01000,ko03009 Bacteria 1TPKI@1239,3F47Z@33958,4HAMF@91061,COG2264@1,COG2264@2 NA|NA|NA J Ribosomal protein L11 methyltransferase HOOMBAJD_02127 568703.LGG_01573 1e-76 292.7 Lactobacillaceae XK27_03960 Bacteria 1VFZQ@1239,2E0MY@1,32W75@2,3F6FP@33958,4HKWR@91061 NA|NA|NA S Protein of unknown function (DUF3013) HOOMBAJD_02128 568703.LGG_01574 3.2e-112 411.0 Lactobacillaceae mpg GO:0003674,GO:0003824,GO:0003905,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 3.2.2.21 ko:K03652 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Bacteria 1V1E6@1239,3FC7N@33958,4HJ10@91061,COG2094@1,COG2094@2 NA|NA|NA L Belongs to the DNA glycosylase MPG family HOOMBAJD_02129 568703.LGG_01575 3.1e-37 160.6 Lactobacillaceae Bacteria 1U7TK@1239,29QBB@1,30BAI@2,3FA5R@33958,4IHR2@91061 NA|NA|NA HOOMBAJD_02130 568703.LGG_01576 2e-62 245.0 Lactobacillaceae Bacteria 1W0J9@1239,3F8AZ@33958,4HYK1@91061,COG5294@1,COG5294@2 NA|NA|NA S Protein of unknown function (DUF1093) HOOMBAJD_02131 568703.LGG_01577 8.9e-26 122.1 Lactobacillaceae Bacteria 1U7XK@1239,29QDN@1,30BCY@2,3FAAQ@33958,4IHUZ@91061 NA|NA|NA HOOMBAJD_02132 1423732.BALS01000048_gene2568 3.2e-61 241.1 Lactobacillaceae Bacteria 1U6BX@1239,29PAD@1,30A8I@2,3F7JN@33958,4IG3I@91061 NA|NA|NA HOOMBAJD_02134 1423816.BACQ01000009_gene270 4.4e-17 95.1 Lactobacillaceae Bacteria 1VASR@1239,3F7F6@33958,4HH3I@91061,COG3064@1,COG3064@2 NA|NA|NA M Host cell surface-exposed lipoprotein HOOMBAJD_02135 568703.LGG_01594 8.5e-145 519.6 Lactobacillaceae hutG 3.5.3.8 ko:K01479 ko00340,ko01100,map00340,map01100 M00045 R02285 RC00221,RC00681 ko00000,ko00001,ko00002,ko01000 Bacteria 1V6B3@1239,3F6V6@33958,4HQ4E@91061,COG3741@1,COG3741@2 NA|NA|NA E N-formylglutamate amidohydrolase HOOMBAJD_02136 568703.LGG_01595 1.2e-54 218.8 Lactobacillaceae XK27_08430 Bacteria 1VIJK@1239,2ED3T@1,3370N@2,3F765@33958,4HPGM@91061 NA|NA|NA S Staphylococcal protein of unknown function (DUF960) HOOMBAJD_02137 568703.LGG_01596 3.7e-90 337.4 Lactobacillaceae ybaK ko:K03976 ko00000,ko01000,ko03016 Bacteria 1V6JF@1239,3F5H1@33958,4HHVB@91061,COG2606@1,COG2606@2 NA|NA|NA S Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily HOOMBAJD_02138 1423732.BALS01000003_gene959 2e-94 351.7 Lactobacillaceae apt GO:0003674,GO:0003824,GO:0003999,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006144,GO:0006168,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009113,GO:0009987,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0034641,GO:0034654,GO:0042440,GO:0043094,GO:0043096,GO:0043101,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046083,GO:0046084,GO:0046112,GO:0046148,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.4.2.7 ko:K00759 ko00230,ko01100,map00230,map01100 R00190,R01229,R04378 RC00063 ko00000,ko00001,ko01000,ko04147 Bacteria 1V1BV@1239,3F4DB@33958,4HFUA@91061,COG0503@1,COG0503@2 NA|NA|NA F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis HOOMBAJD_02139 568703.LGG_01598 0.0 1474.9 Lactobacillaceae recJ ko:K07462 ko03410,ko03430,ko03440,map03410,map03430,map03440 ko00000,ko00001,ko01000,ko03400 Bacteria 1TPXE@1239,3F42C@33958,4H9UP@91061,COG0608@1,COG0608@2 NA|NA|NA L Single-stranded-DNA-specific exonuclease RecJ HOOMBAJD_02140 568703.LGG_01599 7.1e-62 243.0 Lactobacillaceae Bacteria 1U6KN@1239,29PHG@1,30AFM@2,3F83U@33958,4IGDE@91061 NA|NA|NA HOOMBAJD_02141 568703.LGG_01600 2e-80 305.1 Lactobacillaceae 6.3.3.2 ko:K01934 ko00670,ko01100,map00670,map01100 R02301 RC00183 ko00000,ko00001,ko01000 Bacteria 1V6S0@1239,3F9AG@33958,4HKKR@91061,COG4405@1,COG4405@2 NA|NA|NA S ASCH HOOMBAJD_02142 568703.LGG_01601 5.9e-32 142.9 Lactobacillaceae Bacteria 1U7VD@1239,2AI13@1,318EQ@2,3FA82@33958,4IHST@91061 NA|NA|NA HOOMBAJD_02143 568703.LGG_01602 0.0 1186.4 Lactobacillaceae lepA ko:K03596 ko05134,map05134 ko00000,ko00001 Bacteria 1TP0G@1239,3F3Z1@33958,4HASA@91061,COG0481@1,COG0481@2 NA|NA|NA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner HOOMBAJD_02144 568703.LGG_01603 1.7e-186 658.7 Lactobacillaceae dnaJ ko:K03686 ko00000,ko03029,ko03110 Bacteria 1TP00@1239,3F490@33958,4H9KA@91061,COG0484@1,COG0484@2 NA|NA|NA O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins HOOMBAJD_02145 568703.LGG_01604 1e-286 992.3 Lactobacillaceae dnaK GO:0001871,GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0008150,GO:0009986,GO:0030246,GO:0030247,GO:0044464,GO:0051704,GO:0098630,GO:0098743,GO:2001065 ko:K04043 ko03018,ko04212,ko05152,map03018,map04212,map05152 ko00000,ko00001,ko03019,ko03029,ko03110,ko04147 1.A.33.1 Bacteria 1TP1J@1239,3F48C@33958,4HA9S@91061,COG0443@1,COG0443@2 NA|NA|NA O Heat shock 70 kDa protein HOOMBAJD_02146 568703.LGG_01605 5.2e-99 367.1 Lactobacillaceae grpE GO:0000166,GO:0000774,GO:0001871,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006950,GO:0007154,GO:0008150,GO:0009266,GO:0009267,GO:0009408,GO:0009605,GO:0009628,GO:0009986,GO:0009987,GO:0009991,GO:0016043,GO:0017076,GO:0019904,GO:0022607,GO:0030234,GO:0030246,GO:0030247,GO:0030312,GO:0030554,GO:0031667,GO:0031668,GO:0031669,GO:0032991,GO:0033554,GO:0036094,GO:0040007,GO:0042594,GO:0042802,GO:0042803,GO:0043933,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0046983,GO:0050790,GO:0050896,GO:0051082,GO:0051716,GO:0060589,GO:0060590,GO:0065003,GO:0065007,GO:0065009,GO:0071496,GO:0071840,GO:0071944,GO:0097159,GO:0098772,GO:1901265,GO:1901363,GO:2001065 ko:K03687 ko00000,ko03029,ko03110 Bacteria 1V6G2@1239,3F4DY@33958,4HIRK@91061,COG0576@1,COG0576@2 NA|NA|NA O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ HOOMBAJD_02147 568703.LGG_01606 1.9e-192 678.3 Lactobacillaceae hrcA GO:0005575,GO:0005623,GO:0005886,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016020,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0044464,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 ko:K03705 ko00000,ko03000 Bacteria 1TQP7@1239,3F3ST@33958,4HAX5@91061,COG1420@1,COG1420@2 NA|NA|NA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons HOOMBAJD_02149 568703.LGG_01607 3.5e-224 783.9 Lactobacillaceae hemN Bacteria 1TPES@1239,3F4BA@33958,4HA60@91061,COG0635@1,COG0635@2 NA|NA|NA H Involved in the biosynthesis of porphyrin-containing compound HOOMBAJD_02150 568703.LGG_01608 4.6e-174 617.1 Lactobacillaceae ribF 2.7.1.26,2.7.7.2 ko:K11753 ko00740,ko01100,ko01110,map00740,map01100,map01110 M00125 R00161,R00549 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 iSB619.SA_RS06310 Bacteria 1TPKS@1239,3F3TG@33958,4H9KE@91061,COG0196@1,COG0196@2 NA|NA|NA H Belongs to the ribF family HOOMBAJD_02151 568703.LGG_01609 1.2e-158 565.8 Lactobacillaceae truB GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1990481 5.4.99.25 ko:K03177,ko:K03483 ko00000,ko01000,ko03000,ko03016 iSB619.SA_RS06305 Bacteria 1TP9Y@1239,3F3NX@33958,4HA9X@91061,COG0130@1,COG0130@2 NA|NA|NA J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs HOOMBAJD_02152 568703.LGG_01610 6.7e-119 433.3 Lactobacillaceae terC ko:K05794 ko00000 Bacteria 1UVIJ@1239,3F3WS@33958,4HEKW@91061,COG0861@1,COG0861@2 NA|NA|NA P membrane HOOMBAJD_02153 1423732.BALS01000003_gene941 4.6e-58 230.3 Lactobacillaceae rbfA GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009266,GO:0009409,GO:0009628,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0030490,GO:0033554,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0042274,GO:0043021,GO:0043024,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071840,GO:0090304,GO:1901360 ko:K02834 ko00000,ko03009 Bacteria 1VA0P@1239,3F6WZ@33958,4HII1@91061,COG0858@1,COG0858@2 NA|NA|NA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA HOOMBAJD_02154 568703.LGG_01612 0.0 1318.5 Lactobacillaceae infB GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 ko:K02519 ko00000,ko03012,ko03029 Bacteria 1TPAI@1239,3F3JV@33958,4HA8S@91061,COG0532@1,COG0532@2 NA|NA|NA J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex HOOMBAJD_02155 568703.LGG_01613 5.4e-44 183.3 Lactobacillaceae ylxQ ko:K07590,ko:K07742 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1VEYG@1239,3F7ZK@33958,4HNY7@91061,COG1358@1,COG1358@2 NA|NA|NA J ribosomal protein HOOMBAJD_02156 568703.LGG_01614 1.5e-46 191.8 Lactobacillaceae ylxR ko:K02600,ko:K07742 ko00000,ko03009,ko03021 Bacteria 1VEJS@1239,3F7E2@33958,4HKBY@91061,COG2740@1,COG2740@2 NA|NA|NA K Protein of unknown function (DUF448) HOOMBAJD_02157 568703.LGG_01615 7.9e-211 739.6 Lactobacillaceae nusA GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0031554,GO:0031564,GO:0043244,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:1903506,GO:2000112,GO:2001141 ko:K02600,ko:K02945 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03009,ko03011,ko03021 Bacteria 1TPB3@1239,3F3KZ@33958,4HA7F@91061,COG0195@1,COG0195@2 NA|NA|NA K Participates in both transcription termination and antitermination HOOMBAJD_02158 568703.LGG_01616 1e-84 319.3 Lactobacillaceae rimP GO:0000028,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:1901564,GO:1901566,GO:1901576 ko:K09748 ko00000,ko03009 Bacteria 1V6KT@1239,3F6GZ@33958,4HH88@91061,COG0779@1,COG0779@2 NA|NA|NA J Required for maturation of 30S ribosomal subunits HOOMBAJD_02159 568703.LGG_01617 0.0 2844.7 Lactobacillaceae polC GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.7.7.7 ko:K02342,ko:K03763 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Bacteria 1TPAG@1239,3F4AN@33958,4H9RF@91061,COG2176@1,COG2176@2 NA|NA|NA L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity HOOMBAJD_02160 568703.LGG_01618 0.0 1114.4 Lactobacillaceae proS GO:0002161,GO:0003674,GO:0003824,GO:0004812,GO:0004827,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006433,GO:0006450,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0043906,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.15 ko:K01881 ko00970,map00970 M00359,M00360 R03661 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 iJN678.proS,iUTI89_1310.UTI89_C0210 Bacteria 1TRBV@1239,3F44A@33958,4H9NN@91061,COG0442@1,COG0442@2 NA|NA|NA J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS HOOMBAJD_02161 568703.LGG_01619 1.1e-231 808.9 Lactobacillaceae rseP GO:0000988,GO:0000989,GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006355,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016020,GO:0016021,GO:0016787,GO:0019219,GO:0019222,GO:0019538,GO:0031224,GO:0031226,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0040007,GO:0043170,GO:0043856,GO:0044238,GO:0044425,GO:0044459,GO:0044464,GO:0045152,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0070011,GO:0071704,GO:0071944,GO:0080090,GO:0140096,GO:0140110,GO:1901564,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141 3.4.21.107,3.4.21.116 ko:K04771,ko:K06399,ko:K11749,ko:K16922 ko01503,ko02020,ko02024,ko04112,map01503,map02020,map02024,map04112 M00728 ko00000,ko00001,ko00002,ko01000,ko01002,ko03110 Bacteria 1TPMC@1239,3F3TM@33958,4HAQ5@91061,COG0750@1,COG0750@2 NA|NA|NA M zinc metalloprotease HOOMBAJD_02162 568703.LGG_01620 4.3e-141 507.3 Lactobacillaceae cdsA GO:0003674,GO:0003824,GO:0004605,GO:0005575,GO:0006139,GO:0006220,GO:0006221,GO:0006629,GO:0006644,GO:0006650,GO:0006655,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009117,GO:0009165,GO:0009987,GO:0016020,GO:0016024,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044271,GO:0044281,GO:0045017,GO:0046341,GO:0046471,GO:0046474,GO:0046483,GO:0046486,GO:0055086,GO:0070567,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.41 ko:K00981 ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070 M00093 R01799 RC00002 ko00000,ko00001,ko00002,ko01000 iSB619.SA_RS06255 Bacteria 1TT0Q@1239,3FC0H@33958,4HAMN@91061,COG4589@1,COG4589@2 NA|NA|NA S Belongs to the CDS family HOOMBAJD_02163 568703.LGG_01621 3.6e-137 494.2 Lactobacillaceae uppS GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0071704,GO:1901576,GO:1901615,GO:1901617 2.5.1.31 ko:K00806 ko00900,ko01110,map00900,map01110 R06447 RC00279,RC02839 ko00000,ko00001,ko01000,ko01006 Bacteria 1TQTS@1239,3F42M@33958,4HA37@91061,COG0020@1,COG0020@2 NA|NA|NA H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids HOOMBAJD_02164 568703.LGG_01624 4e-93 347.4 Lactobacillaceae frr GO:0002181,GO:0002184,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0022411,GO:0030312,GO:0032984,GO:0034641,GO:0034645,GO:0040007,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 ko:K02838 ko00000,ko03012 Bacteria 1V1F2@1239,3F4X2@33958,4HFSH@91061,COG0233@1,COG0233@2 NA|NA|NA J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another HOOMBAJD_02165 568703.LGG_01625 2.2e-128 464.9 Lactobacillaceae pyrH GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006213,GO:0006220,GO:0006221,GO:0006225,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009163,GO:0009165,GO:0009185,GO:0009188,GO:0009193,GO:0009194,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0015949,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0033862,GO:0034404,GO:0034641,GO:0034654,GO:0040007,GO:0042455,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044464,GO:0046048,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0046872,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0071944,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.7.4.22 ko:K09903 ko00240,ko01100,map00240,map01100 R00158 RC00002 ko00000,ko00001,ko01000 iSB619.SA_RS06240 Bacteria 1TPXN@1239,3F42J@33958,4H9UB@91061,COG0528@1,COG0528@2 NA|NA|NA F Catalyzes the reversible phosphorylation of UMP to UDP HOOMBAJD_02166 568703.LGG_01627 1.3e-154 552.4 Lactobacillaceae tsf GO:0001871,GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005085,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009986,GO:0009987,GO:0010467,GO:0019538,GO:0019899,GO:0030246,GO:0030247,GO:0034641,GO:0034645,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0051020,GO:0065007,GO:0065009,GO:0071704,GO:0097159,GO:0098772,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:2001065 ko:K02357 ko00000,ko03012,ko03029 Bacteria 1TPFJ@1239,3F459@33958,4HBDV@91061,COG0264@1,COG0264@2 NA|NA|NA J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome HOOMBAJD_02167 568703.LGG_01628 1.8e-131 475.3 Lactobacillaceae rpsB GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030312,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046872,GO:0046914,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02967 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1TPNA@1239,3F3M1@33958,4H9N5@91061,COG0052@1,COG0052@2 NA|NA|NA J Belongs to the universal ribosomal protein uS2 family HOOMBAJD_02169 7460.GB43006-PA 6.7e-21 109.4 Hymenoptera GO:0002165,GO:0003674,GO:0003824,GO:0006066,GO:0006629,GO:0007275,GO:0007498,GO:0008150,GO:0008152,GO:0008202,GO:0008205,GO:0009791,GO:0009888,GO:0009987,GO:0010817,GO:0016125,GO:0016491,GO:0016614,GO:0016899,GO:0032501,GO:0032502,GO:0034754,GO:0042180,GO:0042445,GO:0044237,GO:0044238,GO:0044281,GO:0045455,GO:0047875,GO:0048856,GO:0055114,GO:0065007,GO:0065008,GO:0071704,GO:1901360,GO:1901615,GO:1902652 1.1.3.16,1.1.3.49,1.1.5.9,1.1.99.1 ko:K00108,ko:K00115,ko:K10724,ko:K21270 ko00030,ko00260,ko00981,ko01100,ko01110,ko01130,map00030,map00260,map00981,map01100,map01110,map01130 M00555 R00305,R01025,R02373 RC00066,RC00087,RC00154 ko00000,ko00001,ko00002,ko01000 Arthropoda 39Y6A@33154,3BB8M@33208,3D339@33213,3SKVU@50557,41WFV@6656,46GM1@7399,COG2303@1,KOG1238@2759 NA|NA|NA E Glucose dehydrogenase FAD, quinone -like HOOMBAJD_02170 543734.LCABL_11250 6.3e-61 240.0 Lactobacillaceae Bacteria 1U6QN@1239,2DKRR@1,30AIG@2,3F8BB@33958,4IGHX@91061 NA|NA|NA HOOMBAJD_02173 51369.Q9MCC8_9CAUD 7.6e-194 682.9 Siphoviridae Viruses 4QAK6@10239,4QKKV@10699,4QPBY@28883,4QUP9@35237 NA|NA|NA S peptidoglycan catabolic process HOOMBAJD_02175 568703.LGG_00645 9.8e-132 476.1 Lactobacillaceae epsG 2.4.1.293 ko:K00786,ko:K17250 ko00000,ko01000,ko01003 GT2 Bacteria 1V95V@1239,3FC1Y@33958,4HJ1J@91061,COG0463@1,COG0463@2 NA|NA|NA M Glycosyltransferase like family 2 HOOMBAJD_02177 568703.LGG_00648 5.1e-135 487.3 Lactobacillaceae lacT ko:K02531,ko:K02538,ko:K03488 ko00000,ko03000 Bacteria 1VS0S@1239,3F6AX@33958,4HTFM@91061,COG3711@1,COG3711@2 NA|NA|NA K PRD domain HOOMBAJD_02178 155864.EDL933_1958 1.3e-80 305.8 Escherichia ispZ GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 ko:K06190 ko00000 Bacteria 1NWIZ@1224,1RQAB@1236,3XM6E@561,COG2917@1,COG2917@2 NA|NA|NA D probably involved in intracellular septation HOOMBAJD_02179 316407.1742044 8.2e-118 429.9 Escherichia yciC GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 Bacteria 1PYD0@1224,1RQC3@1236,28JC8@1,2Z96Y@2,3XM32@561 NA|NA|NA S Uncharacterised protein family (UPF0259) HOOMBAJD_02181 13249.RPRC013692-PA 6.9e-29 135.6 Paraneoptera ko:K08145 ko00000,ko02000 2.A.1.1.46 Arthropoda 38VIR@33154,3C5X0@33208,3DKYU@33213,3EC3I@33342,3SWN2@50557,427VM@6656,KOG0254@1,KOG0254@2759 NA|NA|NA U Sugar (and other) transporter HOOMBAJD_02182 568703.LGG_00584 4.7e-61 240.4 Lactobacillaceae Bacteria 1U8F4@1239,29QPU@1,30BPI@2,3FAWZ@33958,4IID0@91061 NA|NA|NA HOOMBAJD_02183 568703.LGG_00583 5e-120 437.2 Bacteria Bacteria 2DDU7@1,2ZJAU@2 NA|NA|NA S WxL domain surface cell wall-binding HOOMBAJD_02184 568703.LGG_01079 4.8e-246 856.7 Lactobacillaceae purB GO:0003674,GO:0003824,GO:0004018,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016829,GO:0016840,GO:0016842,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046033,GO:0046390,GO:0046483,GO:0055086,GO:0070626,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.3.2.2 ko:K01756 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 M00048,M00049 R01083,R04559 RC00379,RC00444,RC00445 ko00000,ko00001,ko00002,ko01000 iLJ478.TM1095 Bacteria 1TPMM@1239,3F48P@33958,4HACW@91061,COG0015@1,COG0015@2 NA|NA|NA F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily HOOMBAJD_02185 568703.LGG_01078 3e-204 717.6 Lactobacillaceae purK2 6.3.4.18 ko:K01589 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 M00048 R07404 RC01927 ko00000,ko00001,ko00002,ko01000 Bacteria 1TQCD@1239,3F3YV@33958,4H9M5@91061,COG0026@1,COG0026@2 NA|NA|NA F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) HOOMBAJD_02186 568703.LGG_01077 9.5e-242 842.4 Lactobacillaceae pbuX GO:0003674,GO:0005215,GO:0005345,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006863,GO:0008150,GO:0015205,GO:0015851,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0042906,GO:0042907,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0072530,GO:1904823 ko:K02824,ko:K03458,ko:K16169,ko:K16170 ko00000,ko02000 2.A.40,2.A.40.1.1,2.A.40.1.2,2.A.40.3.1,2.A.40.3.2 iSB619.SA_RS02140 Bacteria 1TNZZ@1239,3F3Y7@33958,4HBAM@91061,COG2233@1,COG2233@2 NA|NA|NA F xanthine permease HOOMBAJD_02187 568703.LGG_01076 1.2e-100 372.5 Lactobacillaceae xpt 2.4.2.22,2.4.2.7 ko:K00759,ko:K03816,ko:K09685 ko00230,ko01100,ko01110,map00230,map01100,map01110 R00190,R01229,R02142,R04378 RC00063,RC00122 ko00000,ko00001,ko01000,ko03000,ko04147 Bacteria 1V1DU@1239,3F49S@33958,4HFNW@91061,COG0503@1,COG0503@2 NA|NA|NA F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis HOOMBAJD_02188 568703.LGG_01075 1.7e-108 398.7 Lactobacillaceae acmC 3.2.1.17,3.2.1.96 ko:K01185,ko:K01227,ko:K02395 ko00511,map00511 ko00000,ko00001,ko01000,ko02035 Bacteria 1V7JY@1239,3F584@33958,4HIY4@91061,COG1705@1,COG1705@2 NA|NA|NA NU mannosyl-glycoprotein HOOMBAJD_02189 568703.LGG_01074 4.9e-82 310.5 Lactobacillaceae yvbK 3.1.3.25 ko:K01092 ko00521,ko00562,ko01100,ko04070,map00521,map00562,map01100,map04070 M00131 R01185,R01186,R01187 RC00078 ko00000,ko00001,ko00002,ko01000 Bacteria 1V3IC@1239,3F7GI@33958,4HH45@91061,COG0454@1,COG0456@2 NA|NA|NA K GNAT family HOOMBAJD_02190 1071400.LBUCD034_0299 1.1e-22 112.1 Lactobacillaceae chpR GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005488,GO:0005515,GO:0005575,GO:0008150,GO:0009987,GO:0016043,GO:0022607,GO:0032991,GO:0042802,GO:0042803,GO:0043933,GO:0044085,GO:0044877,GO:0046983,GO:0051259,GO:0051291,GO:0065003,GO:0071840,GO:0097159,GO:0097351,GO:1901363 ko:K07172,ko:K18829 ko00000,ko02048 Bacteria 1VPRD@1239,3F8B3@33958,4HRKY@91061,COG2336@1,COG2336@2 NA|NA|NA T PFAM SpoVT AbrB HOOMBAJD_02191 568703.LGG_01072 2.1e-31 141.0 Lactobacillaceae cspC ko:K03704 ko00000,ko03000 Bacteria 1VEE0@1239,3F7FW@33958,4HNJC@91061,COG1278@1,COG1278@2 NA|NA|NA K Cold shock protein HOOMBAJD_02192 568703.LGG_01071 8.6e-168 596.3 Lactobacillaceae yqjA Bacteria 1TP2T@1239,3F54Y@33958,4HAWV@91061,COG4129@1,COG4129@2 NA|NA|NA S Putative aromatic acid exporter C-terminal domain HOOMBAJD_02193 568703.LGG_01070 2.1e-109 401.7 Lactobacillaceae Bacteria 1W6RG@1239,28T4I@1,2ZFDJ@2,3F88M@33958,4HZG4@91061 NA|NA|NA HOOMBAJD_02194 568703.LGG_01069 5e-173 613.6 Lactobacillaceae yfdH 2.4.2.53 ko:K10012,ko:K12999,ko:K13670 ko00520,ko01503,map00520,map01503 M00721,M00761 R07661 RC00005,RC02954 ko00000,ko00001,ko00002,ko01000,ko01003,ko01005,ko02000 4.D.2.1.8 GT2 Bacteria 1UHWE@1239,3F3JX@33958,4ISA4@91061,COG1216@1,COG1216@2 NA|NA|NA M Glycosyltransferase, group 2 family protein HOOMBAJD_02195 568703.LGG_01068 0.0 1087.8 Lactobacillaceae Bacteria 1VS0Z@1239,3FBX8@33958,4HJQE@91061,COG5617@1,COG5617@2 NA|NA|NA S Psort location CytoplasmicMembrane, score HOOMBAJD_02196 568703.LGG_01066 0.0 1566.2 Lactobacillaceae Bacteria 1TRR1@1239,3FC7P@33958,4HCR9@91061,COG4485@1,COG4485@2 NA|NA|NA S Bacterial membrane protein YfhO HOOMBAJD_02197 568703.LGG_01065 2.2e-182 645.2 Lactobacillaceae bglH 2.7.1.199,2.7.1.208,2.7.1.211 ko:K02755,ko:K02756,ko:K02757,ko:K02790,ko:K02791,ko:K02808,ko:K02809,ko:K02810 ko00010,ko00500,ko00520,ko02060,map00010,map00500,map00520,map02060 M00266,M00269,M00271 R00811,R02738,R04111 RC00017,RC03206 ko00000,ko00001,ko00002,ko01000,ko02000 4.A.1.1.3,4.A.1.2.1,4.A.1.2.10,4.A.1.2.11,4.A.1.2.12,4.A.1.2.2,4.A.1.2.5,4.A.1.2.6,4.A.1.2.9 Bacteria 1TP5X@1239,3F458@33958,4HA0I@91061,COG1263@1,COG1263@2,COG1264@1,COG1264@2,COG2190@1,COG2190@2 NA|NA|NA G phosphotransferase system HOOMBAJD_02198 568703.LGG_01065 6.7e-93 346.7 Lactobacillaceae bglH 2.7.1.199,2.7.1.208,2.7.1.211 ko:K02755,ko:K02756,ko:K02757,ko:K02790,ko:K02791,ko:K02808,ko:K02809,ko:K02810 ko00010,ko00500,ko00520,ko02060,map00010,map00500,map00520,map02060 M00266,M00269,M00271 R00811,R02738,R04111 RC00017,RC03206 ko00000,ko00001,ko00002,ko01000,ko02000 4.A.1.1.3,4.A.1.2.1,4.A.1.2.10,4.A.1.2.11,4.A.1.2.12,4.A.1.2.2,4.A.1.2.5,4.A.1.2.6,4.A.1.2.9 Bacteria 1TP5X@1239,3F458@33958,4HA0I@91061,COG1263@1,COG1263@2,COG1264@1,COG1264@2,COG2190@1,COG2190@2 NA|NA|NA G phosphotransferase system HOOMBAJD_02199 568703.LGG_01064 2.8e-295 1020.4 Lactobacillaceae 3.2.1.86 ko:K01223 ko00010,ko00500,map00010,map00500 R00839,R05133,R05134 RC00049,RC00171,RC00714 ko00000,ko00001,ko01000 GT1 Bacteria 1TP19@1239,3F3PQ@33958,4HA1W@91061,COG2723@1,COG2723@2 NA|NA|NA G Belongs to the glycosyl hydrolase 1 family HOOMBAJD_02200 568703.LGG_01063 1.7e-95 355.5 Lactobacillaceae Bacteria 1U5Y9@1239,3F6PJ@33958,4IFME@91061,COG5492@1,COG5492@2 NA|NA|NA N domain, Protein HOOMBAJD_02201 568703.LGG_01062 3.9e-170 604.0 Lactobacillaceae galU 2.7.7.9 ko:K00963 ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130 M00129,M00361,M00362,M00549 R00289 RC00002 ko00000,ko00001,ko00002,ko01000 Bacteria 1TQ24@1239,3F45A@33958,4HATY@91061,COG1210@1,COG1210@2 NA|NA|NA M UTP-glucose-1-phosphate uridylyltransferase HOOMBAJD_02202 568703.LGG_01061 6.8e-198 696.4 Lactobacillaceae mvaK2 2.7.1.36,2.7.1.43,2.7.4.2 ko:K00869,ko:K00938,ko:K16190 ko00040,ko00053,ko00520,ko00900,ko01100,ko01110,ko01130,ko04146,map00040,map00053,map00520,map00900,map01100,map01110,map01130,map04146 M00014,M00095 R01476,R02245,R03245 RC00002,RC00017,RC00078 ko00000,ko00001,ko00002,ko01000 Bacteria 1TPKP@1239,3F3RZ@33958,4HC93@91061,COG1577@1,COG1577@2 NA|NA|NA I phosphomevalonate kinase HOOMBAJD_02203 1423732.BALS01000059_gene2808 2.1e-131 475.3 Bacteria GO:0000271,GO:0003674,GO:0003824,GO:0005975,GO:0005976,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0016051,GO:0016740,GO:0016757,GO:0043170,GO:0044238,GO:0071704,GO:1901576 Bacteria COG1442@1,COG1442@2 NA|NA|NA M lipopolysaccharide 3-alpha-galactosyltransferase activity HOOMBAJD_02204 568703.LGG_01060 1.3e-28 131.7 Lactobacillaceae Bacteria 1U82T@1239,2BQ1G@1,32IVS@2,3FAGJ@33958,4II07@91061 NA|NA|NA HOOMBAJD_02206 568703.LGG_01057 1.1e-195 689.1 Lactobacillaceae Bacteria 1VVRP@1239,3FBSG@33958,4HGSR@91061,COG0463@1,COG0463@2 NA|NA|NA M Glycosyltransferase like family 2 HOOMBAJD_02207 568703.LGG_01056 2.2e-159 568.2 Lactobacillaceae map GO:0000096,GO:0003674,GO:0003824,GO:0004177,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006464,GO:0006508,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008198,GO:0008233,GO:0008235,GO:0008237,GO:0008238,GO:0009066,GO:0009987,GO:0010467,GO:0016151,GO:0016485,GO:0016787,GO:0019538,GO:0019752,GO:0030145,GO:0035551,GO:0036211,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0050897,GO:0051604,GO:0070006,GO:0070011,GO:0070084,GO:0071704,GO:0140096,GO:1901564,GO:1901605 3.4.11.18 ko:K01265 ko00000,ko01000,ko01002 Bacteria 1TQC1@1239,3F3MK@33958,4H9S9@91061,COG0024@1,COG0024@2 NA|NA|NA E Methionine Aminopeptidase HOOMBAJD_02208 568703.LGG_01055 8e-79 299.7 Lactobacillaceae fld ko:K03839 ko00000 Bacteria 1V7AG@1239,3F6HY@33958,4HMJF@91061,COG0716@1,COG0716@2 NA|NA|NA C Flavodoxin HOOMBAJD_02209 568703.LGG_01054 8.7e-179 632.9 Lactobacillaceae yihY ko:K07058 ko00000 Bacteria 1U7HM@1239,3F4TC@33958,4H9MJ@91061,COG1295@1,COG1295@2 NA|NA|NA S Belongs to the UPF0761 family HOOMBAJD_02210 568703.LGG_01053 1e-259 902.1 Lactobacillaceae Bacteria 1UCBA@1239,3F3JA@33958,4HBCI@91061,COG4320@1,COG4320@2 NA|NA|NA S Uncharacterized protein conserved in bacteria (DUF2252) HOOMBAJD_02211 568703.LGG_00891 1e-07 62.4 Lactobacillaceae Bacteria 1U8CV@1239,2BT3F@1,32N80@2,3FAUG@33958,4IIAU@91061 NA|NA|NA HOOMBAJD_02212 568703.LGG_01051 2.7e-111 407.9 Lactobacillaceae Bacteria 1V8EE@1239,3FBGB@33958,4HJF2@91061,COG1309@1,COG1309@2 NA|NA|NA K Bacterial regulatory proteins, tetR family HOOMBAJD_02213 568703.LGG_01050 1.1e-236 825.5 Lactobacillaceae pepS ko:K19689 ko00000,ko01000,ko01002 Bacteria 1TP65@1239,3F53R@33958,4H9W8@91061,COG2309@1,COG2309@2 NA|NA|NA E Thermophilic metalloprotease (M29) HOOMBAJD_02214 568703.LGG_01049 0.0 1170.6 Lactobacillaceae recQ GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003824,GO:0004003,GO:0004386,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005694,GO:0005737,GO:0006139,GO:0006259,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0009295,GO:0009378,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032392,GO:0032508,GO:0033554,GO:0034641,GO:0042623,GO:0043138,GO:0043140,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043590,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051276,GO:0051716,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0140097,GO:1901360,GO:1901363 3.6.4.12 ko:K03654 ko03018,map03018 ko00000,ko00001,ko01000,ko03400 Bacteria 1TPN5@1239,3F4PY@33958,4H9QP@91061,COG0514@1,COG0514@2 NA|NA|NA L ATP-dependent DNA helicase RecQ HOOMBAJD_02217 568703.LGG_01047 2.1e-70 271.6 Lactobacillaceae Bacteria 1VEZ0@1239,2DQNY@1,337UX@2,3F875@33958,4HPE2@91061 NA|NA|NA S Domain of unknown function (DUF3284) HOOMBAJD_02218 568703.LGG_00891 7.6e-10 69.7 Lactobacillaceae Bacteria 1U8CV@1239,2BT3F@1,32N80@2,3FAUG@33958,4IIAU@91061 NA|NA|NA HOOMBAJD_02219 568703.LGG_01045 2e-47 194.9 Lactobacillaceae chbA GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006810,GO:0008150,GO:0008643,GO:0009401,GO:0009987,GO:0015144,GO:0016043,GO:0016740,GO:0016772,GO:0016773,GO:0022607,GO:0022804,GO:0022857,GO:0034219,GO:0043933,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0051179,GO:0051234,GO:0051259,GO:0051260,GO:0055085,GO:0065003,GO:0071702,GO:0071840,GO:0090563,GO:0090566,GO:1901264,GO:1902815 2.7.1.196,2.7.1.205 ko:K02759 ko00500,ko02060,map00500,map02060 M00275 R11170,R11172 RC00017,RC03206 ko00000,ko00001,ko00002,ko01000,ko02000 4.A.3.2 iECABU_c1320.ECABU_c17610,iECOK1_1307.ECOK1_1683,iECUMN_1333.ECUMN_2025,iNRG857_1313.NRG857_07575,iUMN146_1321.UM146_09345 Bacteria 1U7M6@1239,3F9W9@33958,4IHIA@91061,COG1447@1,COG1447@2 NA|NA|NA G PTS system, Lactose/Cellobiose specific IIA subunit HOOMBAJD_02220 568703.LGG_01044 5.8e-236 823.2 Lactobacillaceae yfmL GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006807,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009987,GO:0010501,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070035,GO:0071704,GO:0090304,GO:0140098,GO:1901360 3.6.4.13 ko:K05592,ko:K18692 ko03018,map03018 ko00000,ko00001,ko01000,ko03009,ko03019 Bacteria 1TQ9R@1239,3F4K8@33958,4HANR@91061,COG0513@1,COG0513@2 NA|NA|NA L DEAD DEAH box helicase HOOMBAJD_02221 568703.LGG_01043 7.7e-177 626.3 Lactobacillaceae mocA ko:K22230 ko00562,ko01120,map00562,map01120 R09954 RC00182 ko00000,ko00001,ko01000 Bacteria 1TQSS@1239,3F4EV@33958,4HCIG@91061,COG0673@1,COG0673@2 NA|NA|NA S Oxidoreductase HOOMBAJD_02222 568703.LGG_01042 2e-61 241.5 Lactobacillaceae Bacteria 1VNS7@1239,2EGZM@1,33ARR@2,3F83W@33958,4HSZW@91061 NA|NA|NA S Domain of unknown function (DUF4828) HOOMBAJD_02223 568703.LGG_01040 1.1e-59 235.7 Lactobacillaceae Bacteria 1VF0I@1239,3F83V@33958,4HPC2@91061,COG5294@1,COG5294@2 NA|NA|NA S Protein of unknown function (DUF1093) HOOMBAJD_02224 568703.LGG_01039 5.2e-133 480.3 Lactobacillaceae lys ko:K07273 ko00000 Bacteria 1V484@1239,3FC1I@33958,4HJNJ@91061,COG3757@1,COG3757@2 NA|NA|NA M Glycosyl hydrolases family 25 HOOMBAJD_02225 568703.LGG_01038 3.2e-29 133.7 Lactobacillaceae Bacteria 1U6Z0@1239,29PRV@1,30AQ2@2,3F8R4@33958,4IGT9@91061 NA|NA|NA HOOMBAJD_02226 568703.LGG_01037 5e-120 437.6 Lactobacillaceae qmcA GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944 Bacteria 1TPXU@1239,3F4HV@33958,4HGRC@91061,COG0330@1,COG0330@2 NA|NA|NA O prohibitin homologues HOOMBAJD_02227 568703.LGG_01036 1.2e-165 589.0 Lactobacillaceae degV Bacteria 1TQDI@1239,3F4II@33958,4HAYQ@91061,COG1307@1,COG1307@2 NA|NA|NA S Uncharacterised protein, DegV family COG1307 HOOMBAJD_02228 568703.LGG_01034 3.9e-78 297.4 Lactobacillaceae Bacteria 1VBAA@1239,3F9SM@33958,4HN0D@91061,COG0454@1,COG0456@2 NA|NA|NA K Acetyltransferase (GNAT) domain HOOMBAJD_02229 568703.LGG_01033 0.0 1257.3 Lactobacillaceae pepO 3.4.24.71 ko:K01415,ko:K07386 ko00000,ko01000,ko01002,ko04147 Bacteria 1TQTA@1239,3F9J0@33958,4HDSF@91061,COG3590@1,COG3590@2 NA|NA|NA O Peptidase family M13 HOOMBAJD_02230 568703.LGG_01032 3.1e-164 584.3 Lactobacillaceae Bacteria 1TQQR@1239,3F59Q@33958,4HDT2@91061,COG2326@1,COG2326@2 NA|NA|NA S Polyphosphate nucleotide phosphotransferase, PPK2 family HOOMBAJD_02231 568703.LGG_01031 3.9e-145 520.8 Lactobacillaceae cof Bacteria 1VAFW@1239,3FC8C@33958,4HWQV@91061,COG0561@1,COG0561@2 NA|NA|NA S Sucrose-6F-phosphate phosphohydrolase HOOMBAJD_02232 568703.LGG_01030 4.7e-216 756.9 Lactobacillaceae yttB Bacteria 1TPJ6@1239,3F4F9@33958,4HAGJ@91061,COG0477@1,COG2814@2 NA|NA|NA EGP Major facilitator Superfamily HOOMBAJD_02233 568703.LGG_01022 9.1e-248 862.4 Lactobacillaceae rumA GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016436,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070041,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.190 ko:K03215 ko00000,ko01000,ko03009 Bacteria 1TP4H@1239,3F41R@33958,4HA6M@91061,COG2265@1,COG2265@2 NA|NA|NA J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family HOOMBAJD_02234 568703.LGG_01021 2.9e-193 681.0 Lactobacillaceae yegS GO:0001727,GO:0003674,GO:0003824,GO:0004143,GO:0006629,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0030258,GO:0044237,GO:0044238,GO:0044255,GO:0046834,GO:0071704 2.7.1.107 ko:K07029 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 R02240 RC00002,RC00017 ko00000,ko00001,ko01000 Bacteria 1TQAU@1239,3F447@33958,4H9WD@91061,COG1597@1,COG1597@2 NA|NA|NA G Lipid kinase HOOMBAJD_02235 568703.LGG_01020 8e-279 965.7 Lactobacillaceae gatB GO:0003674,GO:0003824,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016879,GO:0016884,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0050567,GO:0070681,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.1.1.12,6.3.5.6,6.3.5.7 ko:K01876,ko:K02434 ko00970,ko01100,map00970,map01100 M00359,M00360 R03905,R04212,R05577 RC00010,RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Bacteria 1TPG3@1239,3F44H@33958,4HAFB@91061,COG0064@1,COG0064@2 NA|NA|NA J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) HOOMBAJD_02236 568703.LGG_01019 2.8e-263 914.1 Lactobacillaceae gatA 6.3.5.6,6.3.5.7 ko:K02433 ko00970,ko01100,map00970,map01100 R03905,R04212 RC00010 ko00000,ko00001,ko01000,ko03029 Bacteria 1TP0C@1239,3F4BK@33958,4HBAZ@91061,COG0154@1,COG0154@2 NA|NA|NA J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) HOOMBAJD_02237 568703.LGG_01018 4.9e-45 186.8 Lactobacillaceae gatC 6.3.5.6,6.3.5.7 ko:K02435 ko00970,ko01100,map00970,map01100 R03905,R04212 RC00010 ko00000,ko00001,ko01000,ko03029 iAF987.Gmet_0076 Bacteria 1VEK3@1239,3F7XB@33958,4HNNA@91061,COG0721@1,COG0721@2 NA|NA|NA J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) HOOMBAJD_02238 568703.LGG_01017 6.8e-204 716.5 Lactobacillaceae camS Bacteria 1TSYE@1239,3F3KI@33958,4HBI8@91061,COG4851@1,COG4851@2 NA|NA|NA S sex pheromone HOOMBAJD_02239 568703.LGG_01016 0.0 1315.1 Lactobacillaceae ligA GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 6.5.1.2 ko:K01972 ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430 R00382 RC00005 ko00000,ko00001,ko01000,ko03032,ko03400 Bacteria 1TPQ3@1239,3F43C@33958,4HA1D@91061,COG0272@1,COG0272@2 NA|NA|NA L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA HOOMBAJD_02240 568703.LGG_01015 0.0 1473.4 Lactobacillaceae pcrA 3.6.4.12 ko:K03657 ko03420,ko03430,map03420,map03430 ko00000,ko00001,ko01000,ko03400 Bacteria 1TPSU@1239,3F400@33958,4HB12@91061,COG0210@1,COG0210@2 NA|NA|NA L ATP-dependent DNA helicase HOOMBAJD_02241 568703.LGG_01014 2e-28 131.7 Lactobacillaceae yjgN GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 Bacteria 1VA3P@1239,3F733@33958,4HK0T@91061,COG4269@1,COG4269@2 NA|NA|NA S Bacterial protein of unknown function (DUF898) HOOMBAJD_02242 568703.LGG_01013 9.1e-107 393.3 Lactobacillaceae 3.1.1.5 ko:K10804 ko01040,map01040 ko00000,ko00001,ko01000,ko01004 Bacteria 1VIWQ@1239,3F64H@33958,4HPR5@91061,COG2755@1,COG2755@2 NA|NA|NA E GDSL-like Lipase/Acylhydrolase HOOMBAJD_02243 568703.LGG_02305 2.8e-213 747.7 Lactobacillaceae tnpB ko:K07496 ko00000 Bacteria 1TRNY@1239,3F431@33958,4HBKP@91061,COG0675@1,COG0675@2 NA|NA|NA L Putative transposase DNA-binding domain HOOMBAJD_02245 568703.LGG_01012 5.2e-175 620.5 Lactobacillaceae Bacteria 1UYJN@1239,3FBEE@33958,4HF8I@91061,COG4640@1,COG4640@2 NA|NA|NA S response to antibiotic HOOMBAJD_02247 568703.LGG_01010 6.1e-249 866.3 Lactobacillaceae uvrX 2.7.7.7 ko:K02346,ko:K03502,ko:K14161 ko00000,ko01000,ko03400 Bacteria 1TP42@1239,3F3WN@33958,4HA1P@91061,COG0389@1,COG0389@2 NA|NA|NA L Belongs to the DNA polymerase type-Y family HOOMBAJD_02248 568703.LGG_01009 1.2e-58 232.3 Lactobacillaceae Bacteria 1W2PF@1239,28WF1@1,2ZIF8@2,3F8BE@33958,4HZUK@91061 NA|NA|NA HOOMBAJD_02249 568703.LGG_01008 3.8e-82 310.8 Lactobacillaceae Bacteria 1U7EM@1239,29Q3G@1,30B24@2,3F9HE@33958,4IHAG@91061 NA|NA|NA HOOMBAJD_02250 568703.LGG_01007 5.2e-72 276.9 Lactobacillaceae pheB 5.4.99.5 ko:K06209 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00024,M00025 R01715 RC03116 ko00000,ko00001,ko00002,ko01000 iYO844.BSU27910 Bacteria 1VAJ9@1239,3F6TJ@33958,4HFRC@91061,COG4492@1,COG4492@2 NA|NA|NA S Belongs to the UPF0735 family HOOMBAJD_02251 568703.LGG_01006 7.6e-31 139.0 Lactobacillaceae Bacteria 1U89K@1239,29QKN@1,30BKA@2,3FAQS@33958,4II7H@91061 NA|NA|NA HOOMBAJD_02252 568703.LGG_01005 1.1e-92 345.9 Lactobacillaceae yhbS GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006473,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016740,GO:0016746,GO:0016747,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0043543,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:1901564 ko:K03824,ko:K09964 ko00000,ko01000 Bacteria 1W0Z5@1239,3FBB4@33958,4HZAD@91061,COG3153@1,COG3153@2 NA|NA|NA S acetyltransferase HOOMBAJD_02253 568703.LGG_01004 9.3e-273 945.7 Lactobacillaceae yclK 2.7.13.3 ko:K07636 ko02020,map02020 M00434 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Bacteria 1TQ1H@1239,3FBSR@33958,4IS6U@91061,COG5000@1,COG5000@2,COG5002@1,COG5002@2 NA|NA|NA T Histidine kinase HOOMBAJD_02254 568703.LGG_01003 8.9e-133 479.6 Lactobacillaceae Bacteria 1TQUQ@1239,3F3QZ@33958,4HAXP@91061,COG0745@1,COG0745@2 NA|NA|NA K response regulator HOOMBAJD_02255 568703.LGG_01002 3.8e-69 267.3 Lactobacillaceae Bacteria 1VKM4@1239,2ZY3R@2,3F6IB@33958,4I0CM@91061,COG5658@1 NA|NA|NA S SdpI/YhfL protein family HOOMBAJD_02257 1423732.BALS01000106_gene437 2.2e-14 84.7 Lactobacillaceae ytgB Bacteria 1VENK@1239,3F7EK@33958,4HNKV@91061,COG2261@1,COG2261@2 NA|NA|NA S Transglycosylase associated protein HOOMBAJD_02258 543734.LCABL_30970 2.9e-16 90.1 Lactobacillaceae Bacteria 1U6PB@1239,2A7T8@1,30WSA@2,3F8SR@33958,4IGGB@91061 NA|NA|NA HOOMBAJD_02259 1196324.A374_08749 7.4e-13 80.1 Firmicutes Bacteria 1W3UJ@1239,2C6FI@1,2ZGHD@2 NA|NA|NA S Phage head-tail joining protein HOOMBAJD_02260 568703.LGG_02902 4.3e-46 190.3 Bacilli Bacteria 1W1M4@1239,28TB1@1,2ZIBE@2,4I0N3@91061 NA|NA|NA S Phage gp6-like head-tail connector protein HOOMBAJD_02261 568703.LGG_02901 3.5e-272 943.7 Lactobacillaceae ko:K06904 ko00000 Bacteria 1TSYM@1239,3F5ZB@33958,4HE4V@91061,COG3740@1,COG3740@2,COG4653@1,COG4653@2 NA|NA|NA S Phage capsid family HOOMBAJD_02262 568703.LGG_02900 1.9e-217 761.5 Lactobacillaceae Bacteria 1TP8B@1239,3F42D@33958,4HHWD@91061,COG4695@1,COG4695@2 NA|NA|NA S Phage portal protein HOOMBAJD_02263 568703.LGG_02899 3.9e-21 106.7 Lactobacillaceae Bacteria 1U8EJ@1239,2BTIA@1,32NQT@2,3FAWA@33958,4IICE@91061 NA|NA|NA HOOMBAJD_02264 568703.LGG_02898 0.0 1106.3 Lactobacillaceae terL Bacteria 1TPU1@1239,3F51U@33958,4HAXI@91061,COG4626@1,COG4626@2 NA|NA|NA S overlaps another CDS with the same product name HOOMBAJD_02265 568703.LGG_02897 9.6e-80 302.8 Lactobacillaceae terS Bacteria 1VJ8S@1239,3F4WP@33958,4HQ9R@91061,COG3747@1,COG3747@2 NA|NA|NA L Phage terminase, small subunit HOOMBAJD_02266 568703.LGG_02896 3.4e-76 290.8 Lactobacillaceae ko:K07451 ko00000,ko01000,ko02048 Bacteria 1VA8J@1239,3F6BP@33958,4HNCA@91061,COG1403@1,COG1403@2 NA|NA|NA L Phage-associated protein HOOMBAJD_02269 568703.LGG_02894 4.9e-268 929.9 Lactobacillaceae Bacteria 1TQNX@1239,3F4EZ@33958,4HCHZ@91061,COG5545@1,COG5545@2 NA|NA|NA S Virulence-associated protein E HOOMBAJD_02270 568703.LGG_02893 1.4e-155 555.4 Lactobacillaceae Bacteria 1VVT1@1239,3FBJ8@33958,4ITNM@91061,COG3598@1,COG3598@2 NA|NA|NA L Bifunctional DNA primase/polymerase, N-terminal HOOMBAJD_02271 568703.LGG_02892 3.9e-24 116.7 Lactobacillaceae Bacteria 1U847@1239,2AIKE@1,3192N@2,3FAIA@33958,4II1N@91061 NA|NA|NA HOOMBAJD_02272 1423732.BALS01000058_gene2818 9.3e-35 152.5 Lactobacillaceae Bacteria 1U7TH@1239,29QB8@1,30BAG@2,3FA5K@33958,4IHQZ@91061 NA|NA|NA HOOMBAJD_02273 568703.LGG_02890 2.2e-22 110.9 Lactobacillaceae Bacteria 1U8DG@1239,29QP0@1,30BNN@2,3FAV3@33958,4IIBE@91061 NA|NA|NA HOOMBAJD_02274 568703.LGG_02889 4.6e-11 72.8 Lactobacillaceae Bacteria 1U84R@1239,29QI2@1,30BHH@2,3FAIV@33958,4II26@91061 NA|NA|NA HOOMBAJD_02275 1423816.BACQ01000022_gene757 1.8e-58 231.9 Lactobacillaceae Bacteria 1U6B6@1239,2BZQS@1,30A7Z@2,3F7HW@33958,4IG2Q@91061 NA|NA|NA HOOMBAJD_02276 568703.LGG_02887 8e-42 176.0 Lactobacillaceae Bacteria 1U7ZA@1239,2BNWZ@1,32HKX@2,3FACM@33958,4IHWN@91061 NA|NA|NA HOOMBAJD_02277 873447.SPB_1464 7.3e-11 72.8 Firmicutes GO:0003674,GO:0003700,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0140110,GO:1903506,GO:2000112,GO:2001141 ko:K07729 ko00000,ko03000 Bacteria 1W3U6@1239,COG1476@1,COG1476@2 NA|NA|NA K TRANSCRIPTIONal HOOMBAJD_02278 568703.LGG_02886 1.4e-107 395.6 Bacteria ko:K07726 ko00000,ko03000 Bacteria COG2944@1,COG2944@2 NA|NA|NA K sequence-specific DNA binding HOOMBAJD_02279 1423816.BACQ01000022_gene760 3e-212 744.2 Lactobacillaceae sip Bacteria 1TTJI@1239,3F4IB@33958,4HDG6@91061,COG0582@1,COG0582@2 NA|NA|NA L Belongs to the 'phage' integrase family HOOMBAJD_02280 568703.LGG_01001 0.0 1560.4 Lactobacillaceae rafA 3.2.1.22 ko:K07407 ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603 R01101,R01103,R01104,R01194,R01329,R02926,R03634,R04019,R04470,R05549,R05961,R06091 RC00049,RC00059,RC00451 ko00000,ko00001,ko01000 Bacteria 1TQF4@1239,3F3RU@33958,4HA5R@91061,COG3345@1,COG3345@2 NA|NA|NA G alpha-galactosidase HOOMBAJD_02281 568703.LGG_01000 2.5e-169 601.3 Lactobacillaceae arbZ Bacteria 1V2F4@1239,3F5FU@33958,4IF2T@91061,COG0204@1,COG0204@2 NA|NA|NA I Phosphate acyltransferases HOOMBAJD_02282 568703.LGG_00999 4.2e-183 647.1 Lactobacillaceae arbY GO:0000271,GO:0003674,GO:0003824,GO:0005975,GO:0005976,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0016051,GO:0016740,GO:0016757,GO:0043170,GO:0044238,GO:0071704,GO:1901576 Bacteria 1UY8Y@1239,3F4YJ@33958,4HBAE@91061,COG1442@1,COG1442@2 NA|NA|NA M family 8 HOOMBAJD_02283 568703.LGG_00998 1.1e-163 582.4 Lactobacillaceae arbx Bacteria 1UY4M@1239,3F4YZ@33958,4IEY6@91061,COG1442@1,COG1442@2 NA|NA|NA M Glycosyl transferase family 8 HOOMBAJD_02284 568703.LGG_00997 1.3e-147 528.9 Lactobacillaceae arbV 2.3.1.51 ko:K00655 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 M00089 R02241,R09381 RC00004,RC00037,RC00039 ko00000,ko00001,ko00002,ko01000,ko01004 Bacteria 1V6NX@1239,3FBFU@33958,4IQ5I@91061,COG0204@1,COG0204@2 NA|NA|NA I Phosphate acyltransferases HOOMBAJD_02285 568703.LGG_00996 1.1e-248 865.5 Lactobacillaceae cycA GO:0001761,GO:0001762,GO:0003333,GO:0003674,GO:0005215,GO:0005326,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0006836,GO:0006855,GO:0006865,GO:0008150,GO:0008324,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015175,GO:0015179,GO:0015180,GO:0015187,GO:0015238,GO:0015318,GO:0015711,GO:0015804,GO:0015807,GO:0015808,GO:0015816,GO:0015849,GO:0015893,GO:0016020,GO:0022857,GO:0022858,GO:0022889,GO:0032328,GO:0032329,GO:0034220,GO:0042221,GO:0042493,GO:0042891,GO:0042895,GO:0042940,GO:0042941,GO:0042942,GO:0042943,GO:0042944,GO:0042945,GO:0044464,GO:0046942,GO:0046943,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098655,GO:0098656,GO:1902475,GO:1903825,GO:1905039 ko:K03293,ko:K11737 ko00000,ko02000 2.A.3.1,2.A.3.1.7 iECO111_1330.ECO111_5093,iECO26_1355.ECO26_5376,iEcHS_1320.EcHS_A4458,iSbBS512_1146.SbBS512_E4749,iYL1228.KPN_04601 Bacteria 1TP97@1239,3F3YD@33958,4H9QX@91061,COG1113@1,COG1113@2 NA|NA|NA E Amino acid permease HOOMBAJD_02286 568703.LGG_00995 2e-74 285.0 Lactobacillaceae Bacteria 1U70M@1239,2BH80@1,32B99@2,3F8TH@33958,4IGUY@91061 NA|NA|NA HOOMBAJD_02287 568703.LGG_00994 2e-183 648.3 Lactobacillaceae ytxK 2.1.1.72 ko:K00571 ko00000,ko01000,ko02048 Bacteria 1TRIQ@1239,3F4CI@33958,4H9SE@91061,COG0827@1,COG0827@2 NA|NA|NA L N-6 DNA Methylase HOOMBAJD_02289 568703.LGG_00993 1e-43 182.6 Lactobacillaceae Bacteria 1U8E6@1239,2BTEK@1,32NKT@2,3FAVY@33958,4IIC3@91061 NA|NA|NA HOOMBAJD_02290 568703.LGG_00992 9.3e-75 286.2 Lactobacillaceae ko:K02248 M00429 ko00000,ko00002,ko02044 Bacteria 1U7MZ@1239,29Q7R@1,30B6S@2,3F9XI@33958,4IHJ8@91061 NA|NA|NA HOOMBAJD_02291 568703.LGG_00991 1.2e-46 192.2 Lactobacillaceae Bacteria 1U7TM@1239,2AHWS@1,3189N@2,3FA5S@33958,4IHR3@91061 NA|NA|NA HOOMBAJD_02293 568703.LGG_00989 5.1e-48 196.8 Lactobacillaceae ko:K02245 M00429 ko00000,ko00002,ko02044 Bacteria 1U7Q0@1239,2BKDX@1,32EUM@2,3FA01@33958,4IHMB@91061 NA|NA|NA HOOMBAJD_02294 568703.LGG_00988 3.4e-164 584.3 Lactobacillaceae comGB ko:K02244 M00429 ko00000,ko00002,ko02044 3.A.14.1 Bacteria 1U00C@1239,3F3S9@33958,4HGUA@91061,COG1459@1,COG1459@2 NA|NA|NA NU type II secretion system HOOMBAJD_02295 568703.LGG_00987 7.6e-131 473.4 Lactobacillaceae comGA ko:K02243 M00429 ko00000,ko00002,ko02044 3.A.14.1 Bacteria 1TPGE@1239,3F4HY@33958,4HB0C@91061,COG2804@1,COG2804@2 NA|NA|NA NU Type II IV secretion system protein HOOMBAJD_02296 568703.LGG_00986 1.7e-131 475.3 Lactobacillaceae yebC GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0009314,GO:0009628,GO:0010212,GO:0044424,GO:0044444,GO:0044464,GO:0050896 Bacteria 1TPP5@1239,3F4WF@33958,4H9WJ@91061,COG0217@1,COG0217@2 NA|NA|NA K Transcriptional regulatory protein HOOMBAJD_02297 568703.LGG_00985 3.3e-91 340.9 Lactobacillaceae Bacteria 1VF6Q@1239,3F57S@33958,4HMDE@91061,COG5652@1,COG5652@2 NA|NA|NA S VanZ like family HOOMBAJD_02298 568703.LGG_00984 0.0 1207.6 Lactobacillaceae pepF2 ko:K08602 ko00000,ko01000,ko01002 Bacteria 1TQ5W@1239,3F4ZV@33958,4HAN9@91061,COG1164@1,COG1164@2 NA|NA|NA E Oligopeptidase F HOOMBAJD_02299 568703.LGG_00983 0.0 1167.9 Lactobacillaceae glmS GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016020,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0040007,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:0071944,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 ko:K00820 ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931 R00768 RC00010,RC00163,RC02752 ko00000,ko00001,ko01000,ko01002 iNJ661.Rv3436c,iSB619.SA_RS11245,iYO844.BSU01780 Bacteria 1TPGU@1239,3F467@33958,4H9R4@91061,COG0449@1,COG0449@2 NA|NA|NA M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source HOOMBAJD_02300 568703.LGG_00982 9.1e-256 889.0 Lactobacillaceae glmM GO:0003674,GO:0003824,GO:0004614,GO:0004615,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006040,GO:0006047,GO:0006048,GO:0006139,GO:0006464,GO:0006468,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008966,GO:0009058,GO:0009225,GO:0009226,GO:0009987,GO:0016310,GO:0016853,GO:0016866,GO:0016868,GO:0018130,GO:0019438,GO:0019538,GO:0034641,GO:0034654,GO:0036211,GO:0040007,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046349,GO:0046483,GO:0046777,GO:0055086,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901576 5.4.2.10 ko:K03431 ko00520,ko01100,ko01130,map00520,map01100,map01130 R02060 RC00408 ko00000,ko00001,ko01000 iSB619.SA_RS11275,iSBO_1134.SBO_3206 Bacteria 1TP1X@1239,3F3W5@33958,4HB16@91061,COG1109@1,COG1109@2 NA|NA|NA G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate HOOMBAJD_02301 568703.LGG_00981 5.4e-166 590.5 Lactobacillaceae ybbR GO:0008150,GO:0031279,GO:0031281,GO:0043085,GO:0044093,GO:0045761,GO:0045762,GO:0050790,GO:0051339,GO:0051349,GO:0065007,GO:0065009 Bacteria 1TSIV@1239,3F41C@33958,4HD8Y@91061,COG4856@1,COG4856@2 NA|NA|NA S YbbR-like protein HOOMBAJD_02302 568703.LGG_00980 1e-151 542.7 Lactobacillaceae dacA GO:0003674,GO:0003824,GO:0004016,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0009975,GO:0016020,GO:0016021,GO:0016829,GO:0016849,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 2.7.7.85 ko:K18672 ko00000,ko01000 Bacteria 1TPRW@1239,3F4N3@33958,4H9XZ@91061,COG1624@1,COG1624@2 NA|NA|NA S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria HOOMBAJD_02303 568703.LGG_00979 5.6e-127 460.3 Lactobacillaceae ko:K01990,ko:K01992 M00254 ko00000,ko00002,ko02000 3.A.1 Bacteria 1TQKM@1239,3F3VV@33958,4HBUK@91061,COG1131@1,COG1131@2 NA|NA|NA V AAA domain, putative AbiEii toxin, Type IV TA system HOOMBAJD_02304 568703.LGG_00978 1e-180 639.4 Lactobacillaceae ko:K01992 M00254 ko00000,ko00002,ko02000 3.A.1 Bacteria 1TQG7@1239,3F40D@33958,4H9MK@91061,COG0842@1,COG0842@2 NA|NA|NA V ABC transporter HOOMBAJD_02305 568703.LGG_00977 3.4e-118 431.0 Lactobacillaceae Bacteria 1V3R8@1239,3F6RQ@33958,4HBEK@91061,COG1309@1,COG1309@2 NA|NA|NA K Transcriptional regulator HOOMBAJD_02306 568703.LGG_00976 0.0 1764.2 Lactobacillaceae pacL 3.6.3.8,3.6.3.9 ko:K01537,ko:K01539 ko04022,ko04024,ko04260,ko04261,ko04911,ko04918,ko04919,ko04925,ko04960,ko04961,ko04964,ko04970,ko04971,ko04972,ko04973,ko04974,ko04976,ko04978,map04022,map04024,map04260,map04261,map04911,map04918,map04919,map04925,map04960,map04961,map04964,map04970,map04971,map04972,map04973,map04974,map04976,map04978 ko00000,ko00001,ko01000,ko04147 3.A.3.1,3.A.3.2 Bacteria 1TPF5@1239,3FC0Z@33958,4HTQ4@91061,COG0474@1,COG0474@2 NA|NA|NA P Cation transporter/ATPase, N-terminus HOOMBAJD_02308 568703.LGG_00974 1.1e-59 235.7 Lactobacillaceae Bacteria 1W494@1239,2CHWU@1,34CGV@2,3F71N@33958,4HZJS@91061 NA|NA|NA HOOMBAJD_02309 568703.LGG_00973 3.5e-76 291.2 Lactobacillaceae Bacteria 1VNYA@1239,2ER2X@1,33INI@2,3F717@33958,4HSEZ@91061 NA|NA|NA S Domain of unknown function (DUF5067) HOOMBAJD_02310 568703.LGG_00972 1.6e-207 728.4 Lactobacillaceae potD ko:K11069 ko02010,map02010 M00299 ko00000,ko00001,ko00002,ko02000 3.A.1.11.1 iSB619.SA_RS05395 Bacteria 1TPY1@1239,3F3W1@33958,4HAET@91061,COG0687@1,COG0687@2 NA|NA|NA P ABC transporter HOOMBAJD_02311 568703.LGG_00971 8.9e-145 519.6 Lactobacillaceae potC GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008324,GO:0008519,GO:0015075,GO:0015101,GO:0015203,GO:0015399,GO:0015405,GO:0015417,GO:0015595,GO:0015606,GO:0015695,GO:0015696,GO:0015846,GO:0015847,GO:0015848,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0031224,GO:0031226,GO:0032991,GO:0034220,GO:0042623,GO:0042626,GO:0043190,GO:0043492,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0072488,GO:0098533,GO:0098655,GO:0098796,GO:0098797,GO:1902047,GO:1902494,GO:1902495,GO:1903711,GO:1904949,GO:1990351 ko:K11070 ko02010,map02010 M00299 ko00000,ko00001,ko00002,ko02000 3.A.1.11.1 iSBO_1134.SBO_1939 Bacteria 1V0VD@1239,3F3ZN@33958,4H9ZC@91061,COG1177@1,COG1177@2 NA|NA|NA P ABC transporter permease HOOMBAJD_02312 568703.LGG_00970 1.7e-148 531.9 Lactobacillaceae potB ko:K11071 ko02010,map02010 M00299 ko00000,ko00001,ko00002,ko02000 3.A.1.11.1 Bacteria 1TQ7Z@1239,3F4CM@33958,4HAYS@91061,COG1176@1,COG1176@2 NA|NA|NA P ABC transporter permease HOOMBAJD_02313 568703.LGG_00969 4.5e-205 720.3 Lactobacillaceae potA 3.6.3.30,3.6.3.31 ko:K02010,ko:K11072 ko02010,map02010 M00190,M00299 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.10,3.A.1.11.1 iSB619.SA_RS05380 Bacteria 1TP2M@1239,3F40H@33958,4H9MS@91061,COG3842@1,COG3842@2 NA|NA|NA P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system HOOMBAJD_02314 568703.LGG_00968 2.9e-96 357.8 Lactobacillaceae puuR Bacteria 1V1K5@1239,3FCDZ@33958,4HHAY@91061,COG1396@1,COG1396@2 NA|NA|NA K Cupin domain HOOMBAJD_02315 568703.LGG_00967 0.0 1318.9 Lactobacillaceae yjcE GO:0003674,GO:0005215,GO:0005451,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0006814,GO:0006873,GO:0006885,GO:0008150,GO:0008324,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015079,GO:0015081,GO:0015291,GO:0015297,GO:0015298,GO:0015299,GO:0015318,GO:0015385,GO:0015386,GO:0015491,GO:0015672,GO:0016020,GO:0019725,GO:0022804,GO:0022821,GO:0022857,GO:0022890,GO:0030001,GO:0030003,GO:0030004,GO:0030641,GO:0034220,GO:0035725,GO:0042592,GO:0044464,GO:0046873,GO:0048878,GO:0050801,GO:0051179,GO:0051234,GO:0051453,GO:0055067,GO:0055080,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071804,GO:0071805,GO:0071944,GO:0098655,GO:0098657,GO:0098659,GO:0098660,GO:0098662,GO:0098719,GO:0098739,GO:0098771,GO:0099516,GO:0099587,GO:1902600 ko:K03316 ko00000 2.A.36 Bacteria 1TR4G@1239,3F42V@33958,4HBJR@91061,COG0025@1,COG0025@2 NA|NA|NA P Sodium proton antiporter HOOMBAJD_02316 568703.LGG_00966 1.6e-163 582.0 Lactobacillaceae murB 1.3.1.98 ko:K00075 ko00520,ko00550,ko01100,map00520,map00550,map01100 R03191,R03192 RC02639 ko00000,ko00001,ko01000,ko01011 Bacteria 1TP3W@1239,3F40T@33958,4HAD8@91061,COG0812@1,COG0812@2 NA|NA|NA M Cell wall formation HOOMBAJD_02317 568703.LGG_00964 1.9e-149 535.0 Lactobacillaceae xth GO:0003674,GO:0003824,GO:0003906,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008296,GO:0008309,GO:0008311,GO:0008408,GO:0009987,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360 3.1.11.2 ko:K01142 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Bacteria 1TPFB@1239,3F4GK@33958,4HAIU@91061,COG0708@1,COG0708@2 NA|NA|NA L exodeoxyribonuclease III HOOMBAJD_02318 568703.LGG_00963 3.1e-98 364.4 Lactobacillaceae dnaQ 2.7.7.7 ko:K02342 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Bacteria 1V57H@1239,3F42Z@33958,4HI1V@91061,COG0847@1,COG0847@2 NA|NA|NA L DNA polymerase III HOOMBAJD_02319 568703.LGG_00962 1.1e-215 755.7 Lactobacillaceae ysdA ko:K01992 M00254 ko00000,ko00002,ko02000 3.A.1 Bacteria 1TXRK@1239,3F3KA@33958,4HC9K@91061,COG1668@1,COG1668@2 NA|NA|NA CP ABC-2 family transporter protein HOOMBAJD_02320 568703.LGG_00961 4.1e-164 583.9 Lactobacillaceae natA ko:K01990 M00254 ko00000,ko00002,ko02000 3.A.1 Bacteria 1TR06@1239,3F4J8@33958,4H9RX@91061,COG4152@1,COG4152@2 NA|NA|NA S ABC transporter, ATP-binding protein HOOMBAJD_02321 568703.LGG_00960 5.4e-83 313.5 Lactobacillaceae ydiB GO:0002949,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0034470,GO:0034641,GO:0034660,GO:0040007,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360 2.7.1.221,5.1.1.1 ko:K01775,ko:K06925,ko:K07102 ko00473,ko00520,ko01100,ko01502,map00473,map00520,map01100,map01502 R00401,R08968,R11024 RC00002,RC00078,RC00285 ko00000,ko00001,ko01000,ko01011,ko03016 Bacteria 1V6CV@1239,3F3MR@33958,4HIIF@91061,COG0802@1,COG0802@2 NA|NA|NA O Hydrolase, P-loop family HOOMBAJD_02322 568703.LGG_00959 8.4e-179 632.9 Lactobacillaceae pta 2.3.1.8,3.6.3.21 ko:K00625,ko:K02028,ko:K13788 ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200 M00236,M00357,M00579 R00230,R00921 RC00004,RC02746,RC02816 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.3 iSB619.SA_RS03155 Bacteria 1TPQ0@1239,3F3MW@33958,4H9VH@91061,COG0280@1,COG0280@2 NA|NA|NA C phosphate acetyltransferase HOOMBAJD_02323 568703.LGG_00958 1.9e-129 468.4 Lactobacillaceae ung GO:0003674,GO:0003824,GO:0004844,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006285,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097506,GO:0097510,GO:0140097,GO:1901360 3.2.2.27 ko:K03648 ko03410,ko05340,map03410,map05340 ko00000,ko00001,ko01000,ko03400 Bacteria 1TPSN@1239,3F3W0@33958,4HBTR@91061,COG0692@1,COG0692@2 NA|NA|NA L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine HOOMBAJD_02324 568703.LGG_00957 2e-158 565.1 Lactobacillaceae ycsE Bacteria 1V5FB@1239,3F58Y@33958,4HGY8@91061,COG0561@1,COG0561@2 NA|NA|NA S Sucrose-6F-phosphate phosphohydrolase HOOMBAJD_02325 568703.LGG_00956 9e-92 342.8 Lactobacillaceae yxjI ko:K21429 ko00000,ko01002 Bacteria 1V8EY@1239,3F698@33958,4HMMS@91061,COG4894@1,COG4894@2 NA|NA|NA HOOMBAJD_02326 568703.LGG_00955 1.3e-102 379.0 Lactobacillaceae 3.2.2.20 ko:K01246,ko:K06977 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Bacteria 1V7GR@1239,3FB97@33958,4HJ11@91061,COG0454@1,COG0456@2 NA|NA|NA K Acetyltransferase (GNAT) domain HOOMBAJD_02327 568703.LGG_00954 7.7e-194 682.9 Lactobacillaceae malK ko:K10112,ko:K17240 ko02010,map02010 M00194,M00196,M00197,M00200,M00201,M00206,M00207,M00491,M00599,M00602,M00605,M00606 ko00000,ko00001,ko00002,ko02000 3.A.1.1,3.A.1.1.38 iLJ478.TM0421 Bacteria 1TP2M@1239,3FC3J@33958,4HBKK@91061,COG3842@1,COG3842@2 NA|NA|NA P ATPases associated with a variety of cellular activities HOOMBAJD_02328 568703.LGG_00953 2.6e-166 591.3 Lactobacillaceae malG ko:K02025,ko:K05814,ko:K15771 ko02010,map02010 M00198,M00207,M00491 ko00000,ko00001,ko00002,ko02000 3.A.1.1,3.A.1.1.16,3.A.1.1.2,3.A.1.1.3 Bacteria 1TREE@1239,3F464@33958,4HCD0@91061,COG1175@1,COG1175@2 NA|NA|NA P ABC-type sugar transport systems, permease components HOOMBAJD_02329 568703.LGG_00952 1.9e-147 528.5 Lactobacillaceae malF ko:K02026,ko:K05815 ko02010,map02010 M00198,M00207 ko00000,ko00001,ko00002,ko02000 3.A.1.1,3.A.1.1.3 Bacteria 1TRCP@1239,3FC8I@33958,4HBKE@91061,COG0395@1,COG0395@2 NA|NA|NA G Binding-protein-dependent transport system inner membrane component HOOMBAJD_02330 568703.LGG_00951 4.4e-239 833.6 Lactobacillaceae malE ko:K02027,ko:K05813 ko02010,map02010 M00198,M00207 ko00000,ko00001,ko00002,ko02000 3.A.1.1,3.A.1.1.3 Bacteria 1TS64@1239,3F4P5@33958,4HEKH@91061,COG1653@1,COG1653@2 NA|NA|NA G Bacterial extracellular solute-binding protein HOOMBAJD_02331 568703.LGG_00949 4.6e-238 830.1 Lactobacillaceae YSH1 ko:K12574 ko03018,map03018 ko00000,ko00001,ko01000,ko03019 Bacteria 1V0AV@1239,3FB9R@33958,4HEB0@91061,COG0595@1,COG0595@2 NA|NA|NA S Metallo-beta-lactamase superfamily HOOMBAJD_02332 568703.LGG_00947 4.3e-49 200.3 Lactobacillaceae Bacteria 1U7SN@1239,29QAR@1,30B9X@2,3FA4A@33958,4IHQ2@91061 NA|NA|NA HOOMBAJD_02333 568703.LGG_00946 1.7e-114 418.7 Lactobacillaceae pgmB GO:0000287,GO:0003674,GO:0003824,GO:0004805,GO:0005488,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005975,GO:0005984,GO:0005991,GO:0005992,GO:0006793,GO:0006796,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008801,GO:0009058,GO:0009292,GO:0009294,GO:0009311,GO:0009312,GO:0009987,GO:0016020,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0016853,GO:0016866,GO:0016868,GO:0019203,GO:0030312,GO:0033554,GO:0034637,GO:0040007,GO:0042221,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044262,GO:0044424,GO:0044444,GO:0044464,GO:0044764,GO:0046351,GO:0046677,GO:0046872,GO:0050896,GO:0051704,GO:0051716,GO:0071704,GO:0071944,GO:1901576 2.4.1.64,3.1.3.12,3.2.1.28,5.4.2.6 ko:K01087,ko:K01194,ko:K01838,ko:K05342 ko00500,ko01100,map00500,map01100 R00010,R02727,R02728,R02778,R11310 RC00017,RC00049,RC00408 ko00000,ko00001,ko00537,ko01000 GH37,GH65 Bacteria 1UY8N@1239,3FCA1@33958,4HHB1@91061,COG0637@1,COG0637@2 NA|NA|NA S Haloacid dehalogenase-like hydrolase HOOMBAJD_02334 568703.LGG_00945 0.0 1514.6 Lactobacillaceae map2 2.4.1.8 ko:K00691 ko00500,ko01100,map00500,map01100 R01555 RC00049 ko00000,ko00001,ko01000 GH65 Bacteria 1TQMB@1239,3F3PG@33958,4HAVB@91061,COG1554@1,COG1554@2 NA|NA|NA G hydrolase, family 65, central catalytic HOOMBAJD_02335 568703.LGG_00944 0.0 1219.1 Lactobacillaceae nplT 3.2.1.133,3.2.1.135,3.2.1.54 ko:K01208 ko00500,ko01100,map00500,map01100 R02112,R03122,R11262 ko00000,ko00001,ko01000 GH13 Bacteria 1TNZ0@1239,3F41N@33958,4HB67@91061,COG0366@1,COG0366@2 NA|NA|NA G Belongs to the glycosyl hydrolase 13 family HOOMBAJD_02336 543734.LCABL_11400 3.2e-83 314.3 Lactobacillaceae smpB GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0070930,GO:0071704,GO:0097159,GO:1901363,GO:1901564 ko:K03664 ko00000 Bacteria 1V3IJ@1239,3F65B@33958,4HGZX@91061,COG0691@1,COG0691@2 NA|NA|NA J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA HOOMBAJD_02337 568703.LGG_00942 0.0 1521.5 Lactobacillaceae rnr ko:K12573,ko:K12585 ko03018,map03018 M00391 ko00000,ko00001,ko00002,ko01000,ko03016,ko03019 Bacteria 1TQ1G@1239,3F4EC@33958,4HBBH@91061,COG0557@1,COG0557@2 NA|NA|NA J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs HOOMBAJD_02338 568703.LGG_00941 5.4e-138 496.9 Lactobacillaceae est GO:0003674,GO:0003824,GO:0005575,GO:0006629,GO:0008150,GO:0008152,GO:0016020,GO:0016298,GO:0016787,GO:0016788,GO:0044238,GO:0071704 3.1.1.1 ko:K03928 ko00000,ko01000 Bacteria 1TQ7X@1239,3F5XW@33958,4HBE6@91061,COG1647@1,COG1647@2 NA|NA|NA S Serine aminopeptidase, S33 HOOMBAJD_02339 568703.LGG_00940 9.3e-31 139.0 Lactobacillaceae secG GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006616,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0022857,GO:0022884,GO:0031522,GO:0032978,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0042886,GO:0042887,GO:0043952,GO:0044464,GO:0045047,GO:0045184,GO:0046907,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061024,GO:0065002,GO:0070727,GO:0070972,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:1904680 ko:K03075 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 ko00000,ko00001,ko00002,ko02044 3.A.5.1,3.A.5.2 Bacteria 1VEQR@1239,3F7IQ@33958,4HNKC@91061,COG1314@1,COG1314@2 NA|NA|NA U Preprotein translocase HOOMBAJD_02340 568703.LGG_00939 1.1e-59 235.7 Lactobacillaceae Bacteria 1U7Q4@1239,29Q8Z@1,30B82@2,3FA07@33958,4IHMF@91061 NA|NA|NA HOOMBAJD_02341 568703.LGG_00938 4.8e-293 1013.1 Lactobacillaceae clcA GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0006821,GO:0008150,GO:0008324,GO:0015075,GO:0015077,GO:0015078,GO:0015291,GO:0015297,GO:0015298,GO:0015299,GO:0015318,GO:0015672,GO:0015698,GO:0015706,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0022890,GO:0031224,GO:0031226,GO:0031404,GO:0034220,GO:0042802,GO:0043167,GO:0043168,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071705,GO:0071944,GO:0098655,GO:0098660,GO:0098662,GO:1902600 ko:K03281,ko:K03499 ko00000,ko02000 2.A.38.1,2.A.38.4,2.A.49 iAF1260.b0155,iB21_1397.B21_00153,iBWG_1329.BWG_0148,iE2348C_1286.E2348C_0162,iEC042_1314.EC042_0155,iEC55989_1330.EC55989_0149,iECBD_1354.ECBD_3463,iECDH10B_1368.ECDH10B_0135,iECDH1ME8569_1439.ECDH1ME8569_0149,iECD_1391.ECD_00154,iECIAI1_1343.ECIAI1_0153,iECO103_1326.ECO103_0155,iECSE_1348.ECSE_0156,iECUMN_1333.ECUMN_0152,iECW_1372.ECW_m0152,iEKO11_1354.EKO11_3761,iETEC_1333.ETEC_0151,iEcDH1_1363.EcDH1_3447,iEcE24377_1341.EcE24377A_0160,iEcolC_1368.EcolC_3504,iJO1366.b0155,iSSON_1240.SSON_0167,iUMNK88_1353.UMNK88_159,iWFL_1372.ECW_m0152,iY75_1357.Y75_RS00790,iZ_1308.Z0166 Bacteria 1TPX0@1239,3F3MU@33958,4HD2H@91061,COG0038@1,COG0038@2,COG0569@1,COG0569@2 NA|NA|NA P chloride HOOMBAJD_02343 568703.LGG_00937 2.2e-63 248.1 Lactobacillaceae Bacteria 1U7TN@1239,29QBC@1,30BAJ@2,3FA5U@33958,4IHR4@91061 NA|NA|NA HOOMBAJD_02344 568703.LGG_00936 3.7e-246 857.1 Lactobacillaceae eno GO:0001968,GO:0003674,GO:0003824,GO:0004634,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009986,GO:0009987,GO:0016052,GO:0016053,GO:0016310,GO:0016829,GO:0016835,GO:0016836,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043236,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0050840,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576 4.2.1.11 ko:K01689 ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066 M00001,M00002,M00003,M00346,M00394 R00658 RC00349 ko00000,ko00001,ko00002,ko01000,ko03019,ko04147 Bacteria 1TP2S@1239,3F3JP@33958,4HAKI@91061,COG0148@1,COG0148@2 NA|NA|NA G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis HOOMBAJD_02345 568703.LGG_00935 1.7e-139 501.9 Lactobacillaceae tpiA GO:0003674,GO:0003824,GO:0004807,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006066,GO:0006071,GO:0006081,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019400,GO:0019405,GO:0019438,GO:0019439,GO:0019563,GO:0019637,GO:0019682,GO:0019693,GO:0019751,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044275,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046164,GO:0046166,GO:0046174,GO:0046184,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901615,GO:1901616 2.7.2.3,5.3.1.1 ko:K00927,ko:K01803 ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230 M00001,M00002,M00003,M00165,M00166,M00308,M00552 R01015,R01512 RC00002,RC00043,RC00423 ko00000,ko00001,ko00002,ko01000,ko04147 iHN637.CLJU_RS19265 Bacteria 1TP2F@1239,3F494@33958,4HAPT@91061,COG0149@1,COG0149@2 NA|NA|NA G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) HOOMBAJD_02346 568703.LGG_00934 1.5e-222 778.5 Lactobacillaceae pgk GO:0001871,GO:0002020,GO:0003674,GO:0003824,GO:0004618,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009893,GO:0009986,GO:0009987,GO:0010468,GO:0010604,GO:0010628,GO:0010755,GO:0010756,GO:0010954,GO:0016052,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0017144,GO:0018130,GO:0019222,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0019899,GO:0030162,GO:0030193,GO:0030195,GO:0030246,GO:0030247,GO:0030312,GO:0031323,GO:0031325,GO:0032101,GO:0032102,GO:0032268,GO:0032270,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0043532,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0045862,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0048518,GO:0048519,GO:0048522,GO:0048583,GO:0048585,GO:0050789,GO:0050794,GO:0050818,GO:0050819,GO:0050878,GO:0051171,GO:0051173,GO:0051186,GO:0051188,GO:0051239,GO:0051241,GO:0051246,GO:0051247,GO:0051917,GO:0051919,GO:0055086,GO:0060255,GO:0061041,GO:0061045,GO:0065007,GO:0065008,GO:0070613,GO:0071704,GO:0071944,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0080090,GO:0080134,GO:0090407,GO:1900046,GO:1900047,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1903034,GO:1903035,GO:1903317,GO:1903319,GO:2001065 2.7.2.3,5.3.1.1 ko:K00927,ko:K01803 ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230 M00001,M00002,M00003,M00165,M00166,M00308,M00552 R01015,R01512 RC00002,RC00043,RC00423 ko00000,ko00001,ko00002,ko01000,ko04147 iSB619.SA_RS04145 Bacteria 1TP3H@1239,3F3SC@33958,4H9R3@91061,COG0126@1,COG0126@2 NA|NA|NA F Belongs to the phosphoglycerate kinase family HOOMBAJD_02347 568703.LGG_00933 2.2e-193 681.4 Lactobacillaceae gap GO:0000166,GO:0003674,GO:0003824,GO:0004365,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006735,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009986,GO:0009987,GO:0016491,GO:0016620,GO:0016903,GO:0019362,GO:0019637,GO:0019674,GO:0022610,GO:0034641,GO:0036094,GO:0043891,GO:0044237,GO:0044238,GO:0044281,GO:0044403,GO:0044406,GO:0044419,GO:0044424,GO:0044464,GO:0044650,GO:0046483,GO:0046496,GO:0048037,GO:0050662,GO:0051186,GO:0051287,GO:0051704,GO:0055086,GO:0055114,GO:0071704,GO:0072524,GO:0097159,GO:0140030,GO:0140032,GO:1901265,GO:1901360,GO:1901363,GO:1901564 1.2.1.12 ko:K00134 ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010 M00001,M00002,M00003,M00165,M00166,M00308,M00552 R01061 RC00149 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 iJR904.b1416,iJR904.b1417 Bacteria 1TNYU@1239,3F3JS@33958,4H9NS@91061,COG0057@1,COG0057@2 NA|NA|NA G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family HOOMBAJD_02348 568703.LGG_00932 3.6e-188 664.1 Lactobacillaceae cggR ko:K05311 ko00000,ko03000 Bacteria 1TP62@1239,3F53Y@33958,4HAE6@91061,COG2390@1,COG2390@2 NA|NA|NA K Putative sugar-binding domain HOOMBAJD_02350 1423732.BALS01000004_gene1260 2.5e-101 374.8 Lactobacillaceae clpP GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005515,GO:0006355,GO:0006508,GO:0006515,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019219,GO:0019222,GO:0019538,GO:0030163,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0042623,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051603,GO:0060255,GO:0065007,GO:0070011,GO:0071704,GO:0080090,GO:0140096,GO:1901564,GO:1901565,GO:1901575,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 3.4.21.92 ko:K01358 ko04112,ko04212,map04112,map04212 ko00000,ko00001,ko01000,ko01002 Bacteria 1TQ91@1239,3F3M0@33958,4HA8J@91061,COG0740@1,COG0740@2 NA|NA|NA O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins HOOMBAJD_02351 568703.LGG_00930 5.5e-80 303.5 Lactobacillaceae ohrR Bacteria 1V6G0@1239,3F74F@33958,4HKQR@91061,COG1846@1,COG1846@2 NA|NA|NA K helix_turn_helix multiple antibiotic resistance protein HOOMBAJD_02352 568703.LGG_00929 1.6e-171 608.6 Lactobacillaceae whiA GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0030312,GO:0043937,GO:0044464,GO:0050789,GO:0050793,GO:0065007,GO:0071944 ko:K09762 ko00000 Bacteria 1TP2X@1239,3F4AB@33958,4HB4H@91061,COG1481@1,COG1481@2 NA|NA|NA K May be required for sporulation HOOMBAJD_02353 568703.LGG_00928 7.7e-191 672.9 Lactobacillaceae ybhK Bacteria 1TPNV@1239,3F4D5@33958,4HA0Z@91061,COG0391@1,COG0391@2 NA|NA|NA S Required for morphogenesis under gluconeogenic growth conditions HOOMBAJD_02354 568703.LGG_00927 6.3e-165 586.6 Lactobacillaceae rapZ GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0034641,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363 ko:K06958 ko00000,ko03019 Bacteria 1TPS4@1239,3F4NY@33958,4H9KM@91061,COG1660@1,COG1660@2 NA|NA|NA S Displays ATPase and GTPase activities HOOMBAJD_02355 568703.LGG_00925 6.7e-85 320.1 Lactobacillaceae Bacteria 1VJ0U@1239,3FB5N@33958,4HQJ0@91061,COG3247@1,COG3247@2 NA|NA|NA S Short repeat of unknown function (DUF308) HOOMBAJD_02356 568703.LGG_00924 0.0 1903.3 Lactobacillaceae uvrA ko:K03701 ko03420,map03420 ko00000,ko00001,ko03400 Bacteria 1TPIJ@1239,3F4TZ@33958,4HAW9@91061,COG0178@1,COG0178@2 NA|NA|NA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate HOOMBAJD_02357 568703.LGG_00923 0.0 1307.0 Lactobacillaceae uvrB ko:K03702,ko:K08999 ko03420,map03420 ko00000,ko00001,ko03400 Bacteria 1TPKB@1239,3F3XM@33958,4HB81@91061,COG0556@1,COG0556@2 NA|NA|NA L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage HOOMBAJD_02358 568703.LGG_00922 6.1e-117 426.8 Lactobacillaceae yfbR ko:K07023 ko00000 Bacteria 1TSDU@1239,3F4RZ@33958,4HA8H@91061,COG1896@1,COG1896@2 NA|NA|NA S HD containing hydrolase-like enzyme HOOMBAJD_02359 543734.LCABL_10680 1.3e-244 852.8 Lactobacillaceae ko:K02004,ko:K09808 ko02010,map02010 M00255,M00258 ko00000,ko00001,ko00002,ko02000 3.A.1,3.A.1.125 Bacteria 1TRAS@1239,3F5WX@33958,4HC7R@91061,COG0577@1,COG0577@2,COG4591@1,COG4591@2 NA|NA|NA V FtsX-like permease family HOOMBAJD_02360 1231336.L248_2708 1e-90 339.7 Lactobacillaceae ko:K02003 M00258 ko00000,ko00002,ko02000 3.A.1 Bacteria 1TP6H@1239,3F6NW@33958,4HGIE@91061,COG1136@1,COG1136@2 NA|NA|NA V ABC transporter HOOMBAJD_02361 543734.LCABL_10650 6.8e-115 420.6 Lactobacillaceae Bacteria 1TT7F@1239,3F619@33958,4HAPG@91061,COG0642@1,COG2205@2 NA|NA|NA T His Kinase A (phosphoacceptor) domain HOOMBAJD_02362 543734.LCABL_10640 9.8e-83 313.2 Lactobacillaceae Bacteria 1TT12@1239,3F6EC@33958,4HDD2@91061,COG0745@1,COG0745@2 NA|NA|NA T Transcriptional regulatory protein, C terminal HOOMBAJD_02363 568703.LGG_00921 0.0 1136.3 Lactobacillaceae pgm GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 5.4.2.2,5.4.2.8 ko:K01835,ko:K01840 ko00010,ko00030,ko00051,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00051,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130 M00114,M00549 R00959,R01057,R01818,R08639 RC00408 ko00000,ko00001,ko00002,ko01000 Bacteria 1TP2N@1239,3F457@33958,4HADU@91061,COG1109@1,COG1109@2 NA|NA|NA G Phosphoglucomutase phosphomannomutase, alpha beta alpha domain HOOMBAJD_02364 568703.LGG_00920 1.5e-180 638.6 Lactobacillaceae trxB 1.8.1.9 ko:K00384 ko00450,map00450 R02016,R03596,R09372 RC00013,RC02518,RC02873 ko00000,ko00001,ko01000 Bacteria 1TNZS@1239,3F411@33958,4HA4N@91061,COG0492@1,COG0492@2 NA|NA|NA C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family HOOMBAJD_02365 568703.LGG_00919 6.9e-195 686.4 Lactobacillaceae gpsA GO:0003674,GO:0003824,GO:0004367,GO:0006072,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016491,GO:0016614,GO:0016616,GO:0019637,GO:0044237,GO:0046167,GO:0047952,GO:0052646,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901576 1.1.1.94 ko:K00057 ko00564,ko01110,map00564,map01110 R00842,R00844 RC00029 ko00000,ko00001,ko01000 Bacteria 1TQ5P@1239,3F4C8@33958,4HAXW@91061,COG0240@1,COG0240@2 NA|NA|NA I Glycerol-3-phosphate dehydrogenase HOOMBAJD_02366 568703.LGG_00918 2.2e-156 558.1 Lactobacillaceae lgt GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0008961,GO:0009058,GO:0009059,GO:0009898,GO:0009987,GO:0016020,GO:0016021,GO:0016740,GO:0016757,GO:0019538,GO:0031224,GO:0031226,GO:0034645,GO:0036211,GO:0040007,GO:0042157,GO:0042158,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0071704,GO:0071944,GO:0098552,GO:0098562,GO:0140096,GO:1901564,GO:1901566,GO:1901576 2.1.1.199 ko:K03438,ko:K13292 ko00000,ko01000,ko03009 Bacteria 1TPAK@1239,3F42N@33958,4HAT0@91061,COG0682@1,COG0682@2 NA|NA|NA M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins HOOMBAJD_02367 568703.LGG_00917 2.8e-174 617.8 Lactobacillaceae hprK GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 ko:K06023 ko00000,ko01000 Bacteria 1TP5Z@1239,3F3Z3@33958,4HAXR@91061,COG1493@1,COG1493@2 NA|NA|NA F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion HOOMBAJD_02368 568703.LGG_00916 1.3e-46 192.2 Lactobacillaceae yvlD ko:K08972 ko00000 Bacteria 1VF4I@1239,3F7IN@33958,4HNXP@91061,COG1950@1,COG1950@2 NA|NA|NA S Mycobacterial 4 TMS phage holin, superfamily IV HOOMBAJD_02369 568703.LGG_00915 1.9e-29 134.8 Lactobacillaceae Bacteria 1U7RM@1239,2A2TA@1,30R6T@2,3FA2M@33958,4IHNY@91061 NA|NA|NA HOOMBAJD_02370 568703.LGG_00914 9.4e-214 749.6 Lactobacillaceae yvlB Bacteria 1TS90@1239,3F5QQ@33958,4HDI6@91061,COG2433@1,COG2433@2,COG3595@1,COG3595@2 NA|NA|NA S Putative adhesin HOOMBAJD_02371 1423748.BALB01000016_gene1441 1.1e-29 136.3 Lactobacillaceae msmX ko:K10112 ko02010,map02010 M00194,M00196,M00197,M00200,M00201,M00206,M00207,M00491,M00602,M00605,M00606 ko00000,ko00001,ko00002,ko02000 3.A.1.1 Bacteria 1TP2M@1239,3FC3D@33958,4HAMQ@91061,COG3842@1,COG3842@2 NA|NA|NA P Belongs to the ABC transporter superfamily HOOMBAJD_02372 1423816.BACQ01000039_gene1601 2.6e-115 421.4 Lactobacillaceae Bacteria 1TQAX@1239,3FBG4@33958,4IQ61@91061,COG1961@1,COG1961@2 NA|NA|NA L Resolvase, N terminal domain HOOMBAJD_02373 568703.LGG_00437 3.2e-46 190.7 Lactobacillaceae ligA GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 6.5.1.2 ko:K01972,ko:K10754 ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430 M00289,M00295 R00382 RC00005 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Bacteria 1W4JC@1239,3F83P@33958,4I09W@91061,COG0272@1,COG0272@2 NA|NA|NA L BRCA1 C Terminus (BRCT) domain HOOMBAJD_02376 60520.HR47_02245 1.8e-15 89.4 Lactobacillaceae Bacteria 1U875@1239,2B24J@1,31UMQ@2,3FAMR@33958,4II4V@91061 NA|NA|NA HOOMBAJD_02379 568703.LGG_00579 4.4e-157 560.8 Lactobacillaceae XK27_00720 ko:K13730 ko05100,map05100 ko00000,ko00001 Bacteria 1UVV2@1239,3F806@33958,4I2C5@91061,COG4886@1,COG4886@2 NA|NA|NA S Leucine-rich repeat (LRR) protein HOOMBAJD_02380 568703.LGG_00026 7e-267 926.0 Lactobacillaceae Bacteria 1TRUS@1239,3F3ME@33958,4HCCQ@91061,COG3039@1,COG3039@2 NA|NA|NA L Transposase DDE domain HOOMBAJD_02381 568703.LGG_02944 4.1e-200 703.7 Lactobacillaceae Bacteria 1TT8V@1239,3F7HJ@33958,4HCE5@91061,COG2801@1,COG2801@2 NA|NA|NA L PFAM Integrase core domain HOOMBAJD_02382 568703.LGG_00020 9.6e-194 682.6 Lactobacillaceae Bacteria 1TRSF@1239,3F3YG@33958,4HADR@91061,COG2826@1,COG2826@2 NA|NA|NA L Transposase and inactivated derivatives, IS30 family HOOMBAJD_02383 764298.STRMA_1500 2e-19 102.4 Bacteria ko:K20373 ko02024,map02024 ko00000,ko00001,ko03000 Bacteria COG1396@1,COG1396@2 NA|NA|NA K sequence-specific DNA binding HOOMBAJD_02384 568703.LGG_01237 4.7e-103 380.6 Lactobacillaceae desR ko:K02479,ko:K07693 ko02020,map02020 M00479 ko00000,ko00001,ko00002,ko02022 Bacteria 1TVTF@1239,3F4VH@33958,4HAJW@91061,COG2197@1,COG2197@2 NA|NA|NA K helix_turn_helix, Lux Regulon HOOMBAJD_02385 568703.LGG_01238 2.2e-199 701.4 Lactobacillaceae desK GO:0003674,GO:0003824,GO:0004721,GO:0005488,GO:0005515,GO:0006464,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019538,GO:0036211,GO:0042578,GO:0042802,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:0140096,GO:1901564 2.7.13.3 ko:K07778 ko02020,map02020 M00479 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Bacteria 1TSUE@1239,3F3VR@33958,4HB9N@91061,COG4585@1,COG4585@2 NA|NA|NA T Histidine kinase HOOMBAJD_02386 568703.LGG_01239 2.4e-128 464.9 Lactobacillaceae yvfS ko:K01992 M00254 ko00000,ko00002,ko02000 3.A.1 Bacteria 1V7QG@1239,3F5Q7@33958,4HFU4@91061,COG0842@1,COG0842@2 NA|NA|NA V ABC-2 type transporter HOOMBAJD_02387 568703.LGG_01240 1.1e-158 565.8 Lactobacillaceae yvfR ko:K01990 M00254 ko00000,ko00002,ko02000 3.A.1 Bacteria 1TRM5@1239,3FC3M@33958,4HFBN@91061,COG1131@1,COG1131@2 NA|NA|NA V ABC transporter HOOMBAJD_02388 568703.LGG_01241 8.9e-84 316.6 Lactobacillaceae Bacteria 1U557@1239,29NKB@1,309IA@2,3F4RF@33958,4IEWP@91061 NA|NA|NA HOOMBAJD_02389 568703.LGG_01242 8.9e-151 540.4 Lactobacillaceae Bacteria 1U53U@1239,2ABP3@1,3114Y@2,3F4F6@33958,4IEV4@91061 NA|NA|NA HOOMBAJD_02390 543734.LCABL_14510 3.7e-82 311.2 Lactobacillaceae Bacteria 1U91G@1239,3F938@33958,4IJ1J@91061,COG0454@1,COG0456@2 NA|NA|NA K Acetyltransferase (GNAT) domain HOOMBAJD_02391 568703.LGG_01249 0.0 1390.2 Lactobacillaceae yhgF GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0009314,GO:0009628,GO:0010212,GO:0044424,GO:0044444,GO:0044464,GO:0050896 ko:K06959 ko00000 Bacteria 1TPFE@1239,3F415@33958,4HAGY@91061,COG2183@1,COG2183@2 NA|NA|NA K Tex-like protein N-terminal domain protein HOOMBAJD_02392 568703.LGG_01250 1.6e-81 308.5 Lactobacillaceae Bacteria 1U6YX@1239,2DKT2@1,30AQ1@2,3F8R1@33958,4IGT6@91061 NA|NA|NA HOOMBAJD_02393 568703.LGG_01251 3.8e-139 500.7 Lactobacillaceae puuD ko:K07010 ko00000,ko01002 Bacteria 1V1KC@1239,3F4PK@33958,4HI59@91061,COG2071@1,COG2071@2 NA|NA|NA S peptidase C26 HOOMBAJD_02394 568703.LGG_01252 1.9e-226 791.6 Lactobacillaceae steT Bacteria 1TQ4K@1239,3FBDD@33958,4IPPJ@91061,COG0531@1,COG0531@2 NA|NA|NA E Amino acid permease HOOMBAJD_02395 568703.LGG_01253 4.1e-17 93.6 Bacilli Bacteria 1V8IM@1239,4HQD4@91061,COG1476@1,COG1476@2 NA|NA|NA K Cro/C1-type HTH DNA-binding domain HOOMBAJD_02396 568703.LGG_01254 0.0 1760.3 Lactobacillaceae 3.6.4.12 ko:K03657,ko:K06131,ko:K06915 ko00564,ko01100,ko03420,ko03430,map00564,map01100,map03420,map03430 R07390 RC00017 ko00000,ko00001,ko01000,ko03400 Bacteria 1TQCB@1239,3F4YB@33958,4HBDJ@91061,COG0210@1,COG0210@2,COG1112@1,COG1112@2,COG1502@1,COG1502@2 NA|NA|NA L AAA domain HOOMBAJD_02397 568703.LGG_01255 2.1e-111 408.3 Lactobacillaceae rpsD GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006417,GO:0006450,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0015935,GO:0019222,GO:0019843,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0032991,GO:0034248,GO:0034250,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0045727,GO:0045903,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0065008,GO:0080090,GO:0097159,GO:1901363,GO:1990904,GO:2000112 ko:K02986 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1TR0J@1239,3F3P0@33958,4HAC9@91061,COG0522@1,COG0522@2 NA|NA|NA J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit HOOMBAJD_02398 568703.LGG_01256 1.7e-84 318.5 Lactobacillaceae ytsP 1.8.4.14 ko:K08968 ko00270,map00270 R02025 RC00639 ko00000,ko00001,ko01000 Bacteria 1V6GQ@1239,3F6NT@33958,4HH7X@91061,COG1956@1,COG1956@2 NA|NA|NA T GAF domain-containing protein HOOMBAJD_02399 568703.LGG_01257 3.5e-273 947.2 Lactobacillaceae ezrA GO:0000278,GO:0000281,GO:0000910,GO:0000917,GO:0000918,GO:0000921,GO:0005575,GO:0005623,GO:0005886,GO:0006996,GO:0007010,GO:0007049,GO:0008150,GO:0009987,GO:0016020,GO:0016043,GO:0022402,GO:0022607,GO:0031106,GO:0032185,GO:0032506,GO:0034622,GO:0043933,GO:0044085,GO:0044464,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051301,GO:0051302,GO:0051781,GO:0061640,GO:0065003,GO:0065007,GO:0070925,GO:0071840,GO:0071944,GO:0090529,GO:1902410,GO:1903047 ko:K06286,ko:K07158 ko00000,ko03036 Bacteria 1TQR7@1239,3F47K@33958,4HA15@91061,COG4477@1,COG4477@2 NA|NA|NA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization HOOMBAJD_02400 568703.LGG_00891 1.4e-08 65.1 Lactobacillaceae Bacteria 1U8CV@1239,2BT3F@1,32N80@2,3FAUG@33958,4IIAU@91061 NA|NA|NA HOOMBAJD_02401 568703.LGG_01258 1e-215 755.7 Lactobacillaceae iscS2 2.8.1.7 ko:K04487 ko00730,ko01100,ko04122,map00730,map01100,map04122 R07460,R11528,R11529 RC01789,RC02313 ko00000,ko00001,ko01000,ko02048,ko03016,ko03029 Bacteria 1TP21@1239,3F4CD@33958,4HAEE@91061,COG1104@1,COG1104@2 NA|NA|NA E Aminotransferase class V HOOMBAJD_02402 568703.LGG_01259 3.9e-226 790.4 Lactobacillaceae thiI GO:0000049,GO:0002937,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0017144,GO:0018130,GO:0019438,GO:0034227,GO:0034470,GO:0034641,GO:0034660,GO:0042364,GO:0042723,GO:0042724,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:0090304,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.8.1.4 ko:K03151 ko00730,ko01100,ko04122,map00730,map01100,map04122 R07461 ko00000,ko00001,ko01000,ko03016 iECNA114_1301.ECNA114_0400,iECO26_1355.ECO26_0455,iECSF_1327.ECSF_0383,iSDY_1059.SDY_0307 Bacteria 1TPNW@1239,3F3N0@33958,4HAV9@91061,COG0301@1,COG0301@2 NA|NA|NA H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS HOOMBAJD_02403 568703.LGG_01260 5.8e-115 420.2 Lactobacillaceae rex ko:K01926 ko00000,ko03000 Bacteria 1TSMR@1239,3F9GZ@33958,4HWTS@91061,COG2344@1,COG2344@2 NA|NA|NA K CoA binding domain HOOMBAJD_02404 568703.LGG_01261 0.0 1782.7 Lactobacillaceae valS GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 ko:K01873 ko00970,map00970 M00359,M00360 R03665 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 iLJ478.TM1817 Bacteria 1TPN4@1239,3F3RB@33958,4HB85@91061,COG0525@1,COG0525@2 NA|NA|NA J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner HOOMBAJD_02405 568703.LGG_01262 1.1e-239 835.5 Lactobacillaceae folC 6.3.2.12,6.3.2.17 ko:K11754 ko00790,ko01100,map00790,map01100 M00126,M00841 R00942,R02237,R04241 RC00064,RC00090,RC00162 ko00000,ko00001,ko00002,ko01000 iLJ478.TM0166 Bacteria 1TPX5@1239,3F498@33958,4HBJM@91061,COG0285@1,COG0285@2 NA|NA|NA H Belongs to the folylpolyglutamate synthase family HOOMBAJD_02406 568703.LGG_01263 9.7e-115 419.5 Lactobacillaceae Bacteria 1V1N8@1239,3F56K@33958,4HG58@91061,COG0637@1,COG0637@2 NA|NA|NA S Haloacid dehalogenase-like hydrolase HOOMBAJD_02407 568703.LGG_01264 2e-118 431.8 Lactobacillaceae radC ko:K03630 ko00000 Bacteria 1TQ3K@1239,3F5IM@33958,4HB1W@91061,COG2003@1,COG2003@2 NA|NA|NA L DNA repair protein HOOMBAJD_02408 1423816.BACQ01000014_gene534 7.8e-180 636.3 Lactobacillaceae mreB ko:K03569 ko00000,ko02048,ko03036,ko04812 1.A.33.1,9.B.157.1 Bacteria 1TP51@1239,3F3ZV@33958,4HA4S@91061,COG1077@1,COG1077@2 NA|NA|NA D cell shape determining protein MreB HOOMBAJD_02409 568703.LGG_01266 8.5e-151 539.7 Lactobacillaceae mreC GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0007163,GO:0008150,GO:0008360,GO:0009273,GO:0009987,GO:0016020,GO:0016021,GO:0022603,GO:0022604,GO:0030428,GO:0031224,GO:0031226,GO:0042546,GO:0043621,GO:0044085,GO:0044425,GO:0044459,GO:0044464,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0065007,GO:0065008,GO:0071554,GO:0071840,GO:0071944,GO:0071963 ko:K03570 ko00000,ko03036 9.B.157.1 Bacteria 1TR1V@1239,3F3MC@33958,4HB0K@91061,COG1792@1,COG1792@2 NA|NA|NA M Involved in formation and maintenance of cell shape HOOMBAJD_02410 568703.LGG_01267 4.7e-83 313.9 Lactobacillaceae mreD GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0008150,GO:0008360,GO:0016020,GO:0016021,GO:0022603,GO:0022604,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0065007,GO:0065008,GO:0071944 ko:K03571 ko00000,ko03036 9.B.157.1 Bacteria 1VEV7@1239,3F6PG@33958,4HPAC@91061,COG2891@1,COG2891@2 NA|NA|NA M rod shape-determining protein MreD HOOMBAJD_02411 568703.LGG_01268 1.4e-113 415.6 Lactobacillaceae minC GO:0000910,GO:0007049,GO:0008150,GO:0009987,GO:0022402,GO:0032506,GO:0036214,GO:0051179,GO:0051301,GO:0061640 ko:K03610 ko00000,ko03036,ko04812 Bacteria 1VAPC@1239,3F61V@33958,4HBTI@91061,COG0850@1,COG0850@2 NA|NA|NA D Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization HOOMBAJD_02412 568703.LGG_01269 2.6e-141 508.1 Lactobacillaceae minD GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K03609 ko00000,ko03036,ko04812 Bacteria 1TP6P@1239,3F3U8@33958,4HB2F@91061,COG2894@1,COG2894@2 NA|NA|NA D Belongs to the ParA family HOOMBAJD_02413 568703.LGG_01270 4.7e-109 400.6 Lactobacillaceae artQ ko:K02029,ko:K02030,ko:K17073,ko:K17074 ko02010,map02010 M00236,M00589 ko00000,ko00001,ko00002,ko02000 3.A.1.3,3.A.1.3.20 Bacteria 1V280@1239,3F3VF@33958,4HGMH@91061,COG0765@1,COG0765@2 NA|NA|NA P ABC transporter permease HOOMBAJD_02414 568703.LGG_01271 1.7e-111 408.7 Lactobacillaceae glnQ 3.6.3.21 ko:K02028 M00236 ko00000,ko00002,ko01000,ko02000 3.A.1.3 Bacteria 1UYAZ@1239,3F4GP@33958,4HE6M@91061,COG1126@1,COG1126@2 NA|NA|NA E ABC transporter HOOMBAJD_02415 568703.LGG_01272 1.5e-152 545.4 Lactobacillaceae aatB ko:K02029,ko:K02030 M00236 ko00000,ko00002,ko02000 3.A.1.3 Bacteria 1TQNR@1239,3F3WC@33958,4HF14@91061,COG0834@1,COG0834@2 NA|NA|NA ET ABC transporter substrate-binding protein HOOMBAJD_02416 568703.LGG_01274 2.3e-270 937.6 Lactobacillaceae cls GO:0003674,GO:0003824,GO:0005575,GO:0006629,GO:0006644,GO:0006650,GO:0006655,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0008808,GO:0009058,GO:0009987,GO:0016020,GO:0016740,GO:0016772,GO:0016780,GO:0019637,GO:0030572,GO:0032048,GO:0032049,GO:0032502,GO:0043934,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0045017,GO:0046471,GO:0046474,GO:0046486,GO:0071704,GO:0090407,GO:1901576 ko:K06131 ko00564,ko01100,map00564,map01100 R07390 RC00017 ko00000,ko00001,ko01000 Bacteria 1TPKY@1239,3F542@33958,4H9TI@91061,COG1502@1,COG1502@2 NA|NA|NA I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol HOOMBAJD_02417 568703.LGG_01275 8.6e-09 65.1 Lactobacillaceae Bacteria 1U8FB@1239,29QPZ@1,30BPQ@2,3FAX6@33958,4IID7@91061 NA|NA|NA S Protein of unknown function (DUF4044) HOOMBAJD_02419 568703.LGG_01276 4.2e-53 213.8 Lactobacillaceae Bacteria 1U7MX@1239,29Q7N@1,30B6Q@2,3F9XF@33958,4IHJ5@91061 NA|NA|NA HOOMBAJD_02420 568703.LGG_01277 1.4e-77 295.4 Lactobacillaceae mraZ GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031333,GO:0043254,GO:0043565,GO:0044087,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2000142,GO:2000143,GO:2001141 ko:K03925 ko00000 Bacteria 1V3JD@1239,3F6K3@33958,4HH23@91061,COG2001@1,COG2001@2 NA|NA|NA K Belongs to the MraZ family HOOMBAJD_02421 568703.LGG_01278 1.2e-169 602.4 Lactobacillaceae rsmH GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.199 ko:K03438 ko00000,ko01000,ko03009 Bacteria 1TNZV@1239,3F3MF@33958,4H9U2@91061,COG0275@1,COG0275@2 NA|NA|NA J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA HOOMBAJD_02422 568703.LGG_01279 6.2e-58 229.9 Bacteria ftsL Bacteria COG4839@1,COG4839@2 NA|NA|NA D cell division protein FtsL HOOMBAJD_02423 568703.LGG_01280 0.0 1389.8 Lactobacillaceae ftsI GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0008144,GO:0008150,GO:0008658,GO:0008955,GO:0009987,GO:0016020,GO:0016021,GO:0016740,GO:0016757,GO:0016758,GO:0031224,GO:0031226,GO:0031406,GO:0032153,GO:0033218,GO:0033293,GO:0036094,GO:0042221,GO:0042493,GO:0043167,GO:0043168,GO:0043177,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051301,GO:0071944,GO:0097159,GO:1901363,GO:1901681 3.4.16.4 ko:K03587,ko:K08384,ko:K08724,ko:K12552,ko:K12556 ko00550,ko01100,ko01501,map00550,map01100,map01501 ko00000,ko00001,ko01000,ko01011,ko03036 iSSON_1240.SSON_0092 Bacteria 1TP93@1239,3F47N@33958,4H9VQ@91061,COG0768@1,COG0768@2 NA|NA|NA M Penicillin-binding Protein HOOMBAJD_02424 568703.LGG_01281 9.2e-178 629.4 Lactobacillaceae mraY GO:0000270,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008963,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016020,GO:0016740,GO:0016772,GO:0016780,GO:0030203,GO:0034645,GO:0040007,GO:0042546,GO:0042802,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0044464,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0071944,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 2.7.8.13 ko:K01000 ko00550,ko01100,ko01502,map00550,map01100,map01502 R05629,R05630 RC00002,RC02753 ko00000,ko00001,ko01000,ko01011 9.B.146 iAF987.Gmet_0409,iEC042_1314.EC042_0088,iECABU_c1320.ECABU_c00920,iECED1_1282.ECED1_0088,iECH74115_1262.ECH74115_0095,iECSP_1301.ECSP_0090,iECs_1301.ECs0091,iG2583_1286.G2583_0091,iSDY_1059.SDY_0117,iZ_1308.Z0097,ic_1306.c0105 Bacteria 1TP8W@1239,3F3YP@33958,4H9TP@91061,COG0472@1,COG0472@2 NA|NA|NA M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan HOOMBAJD_02425 568703.LGG_01282 1e-262 912.1 Lactobacillaceae murD 6.3.2.9 ko:K01925 ko00471,ko00550,ko01100,map00471,map00550,map01100 R02783 RC00064,RC00141 ko00000,ko00001,ko01000,ko01011 Bacteria 1TQ3P@1239,3F49W@33958,4HA5P@91061,COG0771@1,COG0771@2 NA|NA|NA M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) HOOMBAJD_02426 568703.LGG_01283 4.1e-198 697.2 Lactobacillaceae murG GO:0000270,GO:0003674,GO:0003824,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008194,GO:0008375,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016740,GO:0016757,GO:0016758,GO:0030203,GO:0034645,GO:0040007,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0050511,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 2.4.1.227,6.3.2.8 ko:K01924,ko:K02563 ko00471,ko00550,ko01100,ko01502,ko04112,map00471,map00550,map01100,map01502,map04112 R03193,R05032,R05662 RC00005,RC00049,RC00064,RC00141 ko00000,ko00001,ko01000,ko01011 GT28 iLJ478.TM0232,iSFV_1184.SFV_0083,iSF_1195.SF0087,iSFxv_1172.SFxv_0091,iS_1188.S0089 Bacteria 1TQFT@1239,3F4FW@33958,4HBAQ@91061,COG0707@1,COG0707@2 NA|NA|NA M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) HOOMBAJD_02427 568703.LGG_01284 8.5e-151 539.7 Lactobacillaceae divIB ko:K03589 ko04112,map04112 ko00000,ko00001,ko03036 Bacteria 1V6V5@1239,3F406@33958,4HDFD@91061,COG1589@1,COG1589@2 NA|NA|NA D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex HOOMBAJD_02428 568703.LGG_01285 6.9e-224 783.1 Lactobacillaceae ftsA GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0009898,GO:0009987,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032153,GO:0044425,GO:0044459,GO:0044464,GO:0051301,GO:0071944,GO:0098552,GO:0098562 ko:K03590 ko04112,map04112 ko00000,ko00001,ko03036,ko04812 Bacteria 1TP1Z@1239,3F413@33958,4H9NF@91061,COG0849@1,COG0849@2 NA|NA|NA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring HOOMBAJD_02429 568703.LGG_01286 3.1e-218 764.2 Lactobacillaceae ftsZ GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005515,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0030428,GO:0032153,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035639,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0044424,GO:0044464,GO:0051301,GO:0097159,GO:0097367,GO:1901265,GO:1901363 ko:K03531 ko04112,map04112 ko00000,ko00001,ko02048,ko03036,ko04812 Bacteria 1TP6W@1239,3F4V1@33958,4H9WZ@91061,COG0206@1,COG0206@2 NA|NA|NA D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity HOOMBAJD_02430 568703.LGG_01287 6.7e-78 296.6 Lactobacillaceae sepF GO:0000910,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0007049,GO:0008150,GO:0009987,GO:0016020,GO:0016043,GO:0022402,GO:0022607,GO:0032506,GO:0042802,GO:0044085,GO:0044464,GO:0051301,GO:0071840,GO:0071944,GO:0090529 ko:K09772 ko00000,ko03036 Bacteria 1VER3@1239,3F7MQ@33958,4HKIC@91061,COG1799@1,COG1799@2 NA|NA|NA D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA HOOMBAJD_02431 568703.LGG_01288 5.2e-44 183.3 Bacteria yggT GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K02221 ko00000,ko02044 Bacteria COG0762@1,COG0762@2 NA|NA|NA D integral membrane protein HOOMBAJD_02432 568703.LGG_01289 3.2e-144 517.7 Lactobacillaceae ylmH ko:K02487,ko:K06596 ko02020,ko02025,map02020,map02025 M00507 ko00000,ko00001,ko00002,ko01001,ko02022,ko02035 Bacteria 1U5V2@1239,3F48W@33958,4HD3F@91061,COG2302@1,COG2302@2 NA|NA|NA S S4 domain protein HOOMBAJD_02433 568703.LGG_01290 8.5e-81 307.0 Lactobacillaceae divIVA ko:K04074 ko00000,ko03036 Bacteria 1V27M@1239,3FC2J@33958,4HJYN@91061,COG3599@1,COG3599@2 NA|NA|NA D DivIVA protein HOOMBAJD_02434 568703.LGG_01291 0.0 1900.2 Lactobacillaceae ileS GO:0003674,GO:0003824,GO:0004812,GO:0004822,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006428,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.5 ko:K01870 ko00970,map00970 M00359,M00360 R03656 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 iG2583_1286.G2583_0027,iPC815.YPO0475 Bacteria 1TPS7@1239,3F3X4@33958,4HAWB@91061,COG0060@1,COG0060@2 NA|NA|NA J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) HOOMBAJD_02435 568703.LGG_01292 8.2e-37 159.1 Lactobacillaceae cspA ko:K03704 ko00000,ko03000 Bacteria 1W688@1239,3F81I@33958,4I1Y3@91061,COG1278@1,COG1278@2 NA|NA|NA K Cold shock protein HOOMBAJD_02436 568703.LGG_01293 1.5e-145 522.3 Lactobacillaceae pstS GO:0003674,GO:0005488,GO:0006810,GO:0006811,GO:0006817,GO:0006820,GO:0008150,GO:0015698,GO:0042301,GO:0043167,GO:0043168,GO:0051179,GO:0051234 ko:K02040 ko02010,ko02020,ko05152,map02010,map02020,map05152 M00222 ko00000,ko00001,ko00002,ko02000 3.A.1.7 Bacteria 1TQ5X@1239,3F4ER@33958,4HBEB@91061,COG0226@1,COG0226@2 NA|NA|NA P Phosphate HOOMBAJD_02437 568703.LGG_01294 8.1e-263 912.5 Lactobacillaceae ydiC1 Bacteria 1TPRN@1239,3F4D4@33958,4HBXJ@91061,COG0477@1,COG2814@2 NA|NA|NA EGP Major facilitator Superfamily HOOMBAJD_02438 568703.LGG_01295 6.2e-208 729.9 Lactobacillaceae yaaN Bacteria 1TQVX@1239,3F5KJ@33958,4H9Z6@91061,COG3853@1,COG3853@2 NA|NA|NA P Toxic anion resistance protein (TelA) HOOMBAJD_02439 568703.LGG_01296 6.9e-116 423.3 Lactobacillaceae xpaC Bacteria 1VB0U@1239,3F7AZ@33958,4HMAQ@91061,COG4915@1,COG4915@2 NA|NA|NA S 5-bromo-4-chloroindolyl phosphate hydrolysis protein HOOMBAJD_02440 568703.LGG_01297 3.1e-98 364.4 Lactobacillaceae nudF 3.6.1.13 ko:K01515 ko00230,map00230 R01054 RC00002 ko00000,ko00001,ko01000 iHN637.CLJU_RS05505,iSB619.SA_RS07540,iYO844.BSU23610 Bacteria 1V6F5@1239,3F53J@33958,4HII9@91061,COG0494@1,COG0494@2 NA|NA|NA L ADP-ribose pyrophosphatase HOOMBAJD_02441 568703.LGG_01298 5.8e-34 149.8 Lactobacillaceae Bacteria 1U6XT@1239,2A67P@1,30AP5@2,3F8PG@33958,4IGS2@91061 NA|NA|NA HOOMBAJD_02442 568703.LGG_01299 2.4e-122 444.9 Lactobacillaceae mtnN 3.2.2.9 ko:K01243 ko00270,ko01100,ko01230,map00270,map01100,map01230 M00034,M00609 R00194,R01401 RC00063,RC00318 ko00000,ko00001,ko00002,ko01000 Bacteria 1U7WK@1239,3F4HE@33958,4HB8K@91061,COG0775@1,COG0775@2 NA|NA|NA E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively HOOMBAJD_02443 568703.LGG_01300 4.2e-217 760.4 Lactobacillaceae iscS 2.8.1.7 ko:K04487 ko00730,ko01100,ko04122,map00730,map01100,map04122 R07460,R11528,R11529 RC01789,RC02313 ko00000,ko00001,ko01000,ko02048,ko03016,ko03029 Bacteria 1TP21@1239,3F3RF@33958,4HA6H@91061,COG1104@1,COG1104@2 NA|NA|NA E Aminotransferase class V HOOMBAJD_02444 568703.LGG_01302 2.6e-58 231.1 Lactobacillaceae XK27_04120 Bacteria 1VDSF@1239,2DHWG@1,32U9W@2,3F7E3@33958,4HP9N@91061 NA|NA|NA S Putative amino acid metabolism HOOMBAJD_02445 568703.LGG_01303 0.0 1510.7 Lactobacillaceae uvrA2 Bacteria 1TR1H@1239,3F50Y@33958,4H9RE@91061,COG0178@1,COG0178@2 NA|NA|NA L ABC transporter HOOMBAJD_02446 568703.LGG_01304 3.3e-219 767.3 Lactobacillaceae mnmA GO:0001510,GO:0002097,GO:0002098,GO:0002143,GO:0003674,GO:0003824,GO:0004808,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016782,GO:0016783,GO:0030488,GO:0032259,GO:0034227,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.8.1.13 ko:K00566 ko04122,map04122 R08700 RC02313,RC02315 ko00000,ko00001,ko01000,ko03016 Bacteria 1TPIZ@1239,3F4N5@33958,4HBJ6@91061,COG0482@1,COG0482@2 NA|NA|NA J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 HOOMBAJD_02447 568703.LGG_01306 1.3e-122 445.7 Lactobacillaceae pgm6 5.4.2.11,5.4.2.12 ko:K01834,ko:K15634 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230 M00001,M00002,M00003 R01518 RC00536 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Bacteria 1V6ES@1239,3F3U3@33958,4HGZI@91061,COG0406@1,COG0406@2 NA|NA|NA G phosphoglycerate mutase HOOMBAJD_02448 568703.LGG_01307 2.9e-114 417.9 Lactobacillaceae Bacteria 1VFGR@1239,3F4MD@33958,4IBSH@91061,COG0457@1,COG0457@2 NA|NA|NA S Repeat protein HOOMBAJD_02449 568703.LGG_01308 0.0 1591.2 Lactobacillaceae recD2 3.1.11.5 ko:K03581 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Bacteria 1TPZH@1239,3F44X@33958,4HATQ@91061,COG0507@1,COG0507@2 NA|NA|NA L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity HOOMBAJD_02450 568703.LGG_01309 2.1e-243 847.8 Lactobacillaceae els Bacteria 1TRPM@1239,3F5HJ@33958,4HD22@91061,COG4552@1,COG4552@2 NA|NA|NA S Sterol carrier protein domain HOOMBAJD_02451 568703.LGG_01310 2.2e-184 651.4 Lactobacillaceae ytlR 2.7.1.91 ko:K04718 ko00600,ko01100,ko04020,ko04071,ko04072,ko04370,ko04371,ko04666,ko05152,map00600,map01100,map04020,map04071,map04072,map04370,map04371,map04666,map05152 M00100 R01926,R02976 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 Bacteria 1V7DZ@1239,3F5GQ@33958,4HBUD@91061,COG1597@1,COG1597@2 NA|NA|NA I Diacylglycerol kinase catalytic domain HOOMBAJD_02452 568703.LGG_01311 0.0 1106.7 Lactobacillaceae rnjA GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004527,GO:0004532,GO:0004534,GO:0004540,GO:0005488,GO:0005515,GO:0006139,GO:0006364,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008409,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016072,GO:0016787,GO:0016788,GO:0016796,GO:0016896,GO:0022613,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0042802,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0090503,GO:0140098,GO:1901360 ko:K12574 ko03018,map03018 ko00000,ko00001,ko01000,ko03019 Bacteria 1TQ9G@1239,3F3TT@33958,4HAAP@91061,COG0595@1,COG0595@2 NA|NA|NA J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay HOOMBAJD_02453 568703.LGG_01312 4.9e-31 139.8 Lactobacillaceae ykzG Bacteria 1VEI7@1239,3F807@33958,4HNSK@91061,COG5503@1,COG5503@2 NA|NA|NA S Belongs to the UPF0356 family HOOMBAJD_02455 568703.LGG_01313 8.4e-73 279.6 Lactobacillaceae Bacteria 1VQPI@1239,2C389@1,2ZQCN@2,3F79N@33958,4I0G9@91061 NA|NA|NA HOOMBAJD_02456 568703.LGG_01314 3.9e-26 124.0 Lactobacillaceae Bacteria 1U8HD@1239,29QQZ@1,30BQS@2,3FAZK@33958,4IIF9@91061 NA|NA|NA HOOMBAJD_02457 568703.LGG_01315 1.2e-100 372.5 Lactobacillaceae def GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0018193,GO:0018206,GO:0019538,GO:0031365,GO:0036211,GO:0042586,GO:0043170,GO:0043412,GO:0043686,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:1901564 3.5.1.31,3.5.1.88 ko:K01450,ko:K01462 ko00270,ko00630,map00270,map00630 R00653 RC00165,RC00323 ko00000,ko00001,ko01000 Bacteria 1V70B@1239,3F3YH@33958,4HH0G@91061,COG0242@1,COG0242@2 NA|NA|NA J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions HOOMBAJD_02458 568703.LGG_01319 4.3e-136 490.7 Lactobacillaceae Bacteria 1U7D2@1239,29Q2F@1,30B13@2,3F9EB@33958,4IH8M@91061 NA|NA|NA S E1-E2 ATPase HOOMBAJD_02459 568703.LGG_01320 1.6e-210 738.4 Lactobacillaceae pdhA 1.2.4.1,1.2.4.4 ko:K00161,ko:K00166 ko00010,ko00020,ko00280,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00280,map00620,map00640,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230 M00036,M00307 R00014,R00209,R01699,R03270,R07599,R07600,R07601,R07602,R07603,R07604,R10996,R10997 RC00004,RC00027,RC00627,RC02742,RC02743,RC02744,RC02882,RC02883,RC02949,RC02953 br01601,ko00000,ko00001,ko00002,ko01000 Bacteria 1TQDG@1239,3F3JK@33958,4H9PQ@91061,COG1071@1,COG1071@2 NA|NA|NA C Dehydrogenase E1 component HOOMBAJD_02460 568703.LGG_01321 4.8e-182 643.7 Lactobacillaceae pdhB GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0016020,GO:0030312,GO:0044464,GO:0071944,GO:0140030,GO:0140032 1.2.4.1 ko:K00162,ko:K21417 ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230 M00307 R00014,R00209,R01699,R03270 RC00004,RC00027,RC00627,RC02742,RC02744,RC02882 br01601,ko00000,ko00001,ko00002,ko01000 iNJ661.Rv2496c,iYO844.BSU14590 Bacteria 1TP3J@1239,3F4RV@33958,4HA4H@91061,COG0022@1,COG0022@2 NA|NA|NA C Transketolase, C-terminal domain protein HOOMBAJD_02461 543734.LCABL_15380 3.3e-244 850.9 Lactobacillaceae pdhC 2.3.1.12 ko:K00627 ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200 M00307 R00209,R02569 RC00004,RC02742,RC02857 br01601,ko00000,ko00001,ko00002,ko01000 Bacteria 1TR5N@1239,3F3RR@33958,4HA7A@91061,COG0508@1,COG0508@2 NA|NA|NA C Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex HOOMBAJD_02462 568703.LGG_01323 2.4e-259 901.0 Lactobacillaceae lpdA GO:0000166,GO:0001505,GO:0003674,GO:0003824,GO:0004148,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005759,GO:0005829,GO:0006082,GO:0006084,GO:0006085,GO:0006086,GO:0006090,GO:0006103,GO:0006139,GO:0006163,GO:0006164,GO:0006464,GO:0006520,GO:0006544,GO:0006546,GO:0006637,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008270,GO:0009056,GO:0009058,GO:0009063,GO:0009069,GO:0009071,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015036,GO:0016054,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0017144,GO:0018130,GO:0018335,GO:0019362,GO:0019438,GO:0019464,GO:0019538,GO:0019637,GO:0019693,GO:0019752,GO:0031974,GO:0031981,GO:0032787,GO:0032991,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0035383,GO:0035384,GO:0036094,GO:0036211,GO:0042133,GO:0042135,GO:0042737,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043436,GO:0043543,GO:0043603,GO:0043604,GO:0043648,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044272,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045239,GO:0045240,GO:0045250,GO:0045252,GO:0045254,GO:0046390,GO:0046395,GO:0046483,GO:0046496,GO:0046872,GO:0046914,GO:0048037,GO:0050660,GO:0050662,GO:0050896,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0061732,GO:0065007,GO:0065008,GO:0070013,GO:0071616,GO:0071704,GO:0072521,GO:0072522,GO:0072524,GO:0090407,GO:0097159,GO:0106077,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1902494,GO:1990204,GO:1990234 1.8.1.4 ko:K00382 ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00036,M00307,M00532 R00209,R01221,R01698,R03815,R07618,R08549 RC00004,RC00022,RC00583,RC02742,RC02833,RC02834 br01601,ko00000,ko00001,ko00002,ko01000,ko04147 iAPECO1_1312.APECO1_1869,iEcolC_1368.EcolC_3543,iPC815.YPO3417,iSFV_1184.SFV_0107,iUMN146_1321.UM146_23385 Bacteria 1TP1W@1239,3F426@33958,4HB3K@91061,COG1249@1,COG1249@2 NA|NA|NA C Dehydrogenase HOOMBAJD_02463 568703.LGG_01324 1.6e-155 555.4 Lactobacillaceae 1.1.1.27 ko:K00016 ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922 R00703,R01000,R03104 RC00031,RC00044 ko00000,ko00001,ko01000,ko04147 Bacteria 1UFQZ@1239,3F4RQ@33958,4IEWQ@91061,COG0039@1,COG0039@2 NA|NA|NA C L-malate dehydrogenase activity HOOMBAJD_02464 568703.LGG_01325 1.4e-46 191.8 Lactobacillaceae yktA ko:K16509 ko00000 Bacteria 1VEK8@1239,3F80A@33958,4HNKR@91061,COG4476@1,COG4476@2 NA|NA|NA S Belongs to the UPF0223 family HOOMBAJD_02465 568703.LGG_01326 5e-145 520.4 Lactobacillaceae suhB 3.1.3.25 ko:K01092 ko00521,ko00562,ko01100,ko04070,map00521,map00562,map01100,map04070 M00131 R01185,R01186,R01187 RC00078 ko00000,ko00001,ko00002,ko01000 Bacteria 1TR4E@1239,3F5BB@33958,4HB92@91061,COG0483@1,COG0483@2 NA|NA|NA G Belongs to the inositol monophosphatase superfamily HOOMBAJD_02466 568703.LGG_01327 0.0 1198.7 Lactobacillaceae typA GO:0000027,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006996,GO:0008150,GO:0009266,GO:0009408,GO:0009409,GO:0009628,GO:0009987,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043933,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0065003,GO:0070925,GO:0071826,GO:0071840 ko:K06207 ko00000 Bacteria 1TQ5Y@1239,3F3UK@33958,4HAQ6@91061,COG1217@1,COG1217@2 NA|NA|NA T GTP-binding protein TypA HOOMBAJD_02467 568703.LGG_01328 3.8e-210 737.3 Lactobacillaceae ftsW ko:K03588 ko04112,map04112 ko00000,ko00001,ko02000,ko03036 2.A.103.1 Bacteria 1TPT7@1239,3F4IK@33958,4HAEV@91061,COG0772@1,COG0772@2 NA|NA|NA D Belongs to the SEDS family HOOMBAJD_02468 568703.LGG_01329 0.0 2245.7 Lactobacillaceae pyc GO:0003674,GO:0003824,GO:0004075,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010565,GO:0016053,GO:0016874,GO:0016879,GO:0019216,GO:0019217,GO:0019222,GO:0019752,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032787,GO:0042304,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045717,GO:0045833,GO:0045922,GO:0046394,GO:0046890,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051055,GO:0062012,GO:0062014,GO:0065007,GO:0071704,GO:0072330,GO:0080090,GO:1901576 6.4.1.1 ko:K01958 ko00020,ko00620,ko00720,ko01100,ko01120,ko01200,ko01230,map00020,map00620,map00720,map01100,map01120,map01200,map01230 M00173 R00344 RC00040,RC00367 ko00000,ko00001,ko00002,ko01000 Bacteria 1UHP9@1239,3F4U7@33958,4IS56@91061,COG1038@1,COG1038@2 NA|NA|NA C Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second HOOMBAJD_02469 568703.LGG_01330 3.8e-57 227.3 Lactobacillaceae ylbG Bacteria 1VF52@1239,3F70V@33958,4HNTH@91061,COG4471@1,COG4471@2 NA|NA|NA S Uncharacterized protein conserved in bacteria (DUF2129) HOOMBAJD_02470 568703.LGG_01331 1.7e-99 368.6 Lactobacillaceae rsmD 2.1.1.171 ko:K08316 R07234 RC00003 ko00000,ko01000,ko03009 Bacteria 1V3JF@1239,3F505@33958,4HGXT@91061,COG0742@1,COG0742@2 NA|NA|NA L RNA methyltransferase, RsmD family HOOMBAJD_02471 568703.LGG_01332 1.1e-84 319.3 Lactobacillaceae coaD GO:0003674,GO:0003824,GO:0004595,GO:0005488,GO:0005515,GO:0006082,GO:0006139,GO:0006163,GO:0006164,GO:0006575,GO:0006725,GO:0006732,GO:0006753,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009110,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0015939,GO:0015940,GO:0016043,GO:0016053,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019752,GO:0022607,GO:0032787,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034214,GO:0034641,GO:0034654,GO:0042364,GO:0042398,GO:0042802,GO:0043436,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046390,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0051259,GO:0055086,GO:0065003,GO:0070566,GO:0071704,GO:0071840,GO:0072330,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.3 ko:K00954 ko00770,ko01100,map00770,map01100 M00120 R03035 RC00002 ko00000,ko00001,ko00002,ko01000 iPC815.YPO0053,iSDY_1059.SDY_4064 Bacteria 1V3MR@1239,3F6YS@33958,4HH47@91061,COG0669@1,COG0669@2 NA|NA|NA H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate HOOMBAJD_02472 568703.LGG_01333 9.7e-192 676.0 Lactobacillaceae ylbL ko:K07177 ko02024,map02024 ko00000,ko00001,ko01002 Bacteria 1TRUF@1239,3F4KY@33958,4HBAY@91061,COG3480@1,COG3480@2 NA|NA|NA T Belongs to the peptidase S16 family HOOMBAJD_02473 568703.LGG_01334 1.3e-106 392.5 Lactobacillaceae comEA ko:K02237 M00429 ko00000,ko00002,ko02044 3.A.11.1,3.A.11.2 Bacteria 1VA3W@1239,3F7NP@33958,4HKJ1@91061,COG1555@1,COG1555@2 NA|NA|NA L Competence protein ComEA HOOMBAJD_02474 568703.LGG_01335 0.0 1443.3 Lactobacillaceae comEC ko:K02238 M00429 ko00000,ko00002,ko02044 3.A.11.1,3.A.11.2 Bacteria 1TS9U@1239,3F3VT@33958,4H9M4@91061,COG0658@1,COG0658@2,COG2333@1,COG2333@2 NA|NA|NA S Competence protein ComEC HOOMBAJD_02475 568703.LGG_01336 5.9e-194 683.3 Lactobacillaceae holA 2.7.7.7 ko:K02340 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Bacteria 1TRM0@1239,3F3TP@33958,4HBB4@91061,COG1466@1,COG1466@2 NA|NA|NA L DNA polymerase III delta subunit HOOMBAJD_02476 568703.LGG_01337 2.3e-35 154.5 Lactobacillaceae rpsT GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0004857,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008073,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030234,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0042979,GO:0043043,GO:0043086,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050790,GO:0065003,GO:0065007,GO:0065009,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:0098772,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02968 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1VEGX@1239,3F7D8@33958,4HNJS@91061,COG0268@1,COG0268@2 NA|NA|NA J Binds directly to 16S ribosomal RNA HOOMBAJD_02477 568703.LGG_01338 5.4e-43 179.9 Lactobacillaceae rpsO GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006139,GO:0006378,GO:0006396,GO:0006397,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0016043,GO:0016070,GO:0016071,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0031123,GO:0031124,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043631,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02956 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1VA5C@1239,3F7DV@33958,4HKE9@91061,COG0184@1,COG0184@2 NA|NA|NA J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome HOOMBAJD_02478 568703.LGG_01339 1.1e-119 436.0 Lactobacillaceae Bacteria 1U7FW@1239,29Q46@1,30B2W@2,3F9K7@33958,4IHBY@91061 NA|NA|NA HOOMBAJD_02479 568703.LGG_01340 0.0 1102.4 Lactobacillaceae rnjB GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0006139,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016787,GO:0016788,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360 ko:K12574 ko03018,map03018 ko00000,ko00001,ko01000,ko03019 Bacteria 1TQ9G@1239,3F3U9@33958,4HAAP@91061,COG0595@1,COG0595@2 NA|NA|NA J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay HOOMBAJD_02480 568703.LGG_01341 1.1e-159 569.3 Bacilli Bacteria 1W4AR@1239,4HZIS@91061,COG0457@1,COG0457@2 NA|NA|NA S Tetratricopeptide repeat HOOMBAJD_02481 568703.LGG_01342 1.2e-224 785.4 Lactobacillaceae tuf GO:0001817,GO:0001819,GO:0002791,GO:0002793,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0008150,GO:0009274,GO:0009275,GO:0009986,GO:0010339,GO:0016020,GO:0022610,GO:0030312,GO:0032677,GO:0032757,GO:0032879,GO:0032880,GO:0035821,GO:0044003,GO:0044068,GO:0044403,GO:0044406,GO:0044419,GO:0044424,GO:0044426,GO:0044462,GO:0044464,GO:0044650,GO:0044651,GO:0048518,GO:0048522,GO:0050707,GO:0050708,GO:0050714,GO:0050715,GO:0050789,GO:0050794,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051222,GO:0051223,GO:0051239,GO:0051240,GO:0051701,GO:0051704,GO:0051817,GO:0065007,GO:0070201,GO:0071944,GO:0090087,GO:1903530,GO:1903532,GO:1904951,GO:2000482,GO:2000484 ko:K02358,ko:K15771 ko02010,map02010 M00491 ko00000,ko00001,ko00002,ko02000,ko03012,ko03029,ko04147 3.A.1.1.16,3.A.1.1.2 Bacteria 1TPKC@1239,3F3ZP@33958,4HAEH@91061,COG0050@1,COG0050@2 NA|NA|NA J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis HOOMBAJD_02482 1423816.BACQ01000013_gene462 1.1e-81 310.1 Lactobacillaceae Bacteria 1TQXN@1239,3F4Y5@33958,4HBHT@91061,COG5434@1,COG5434@2 NA|NA|NA M Protein of unknown function (DUF3737) HOOMBAJD_02483 568703.LGG_01347 9e-133 479.6 Lactobacillaceae cobB ko:K12410 ko00000,ko01000 Bacteria 1TQKD@1239,3F9HM@33958,4HC4I@91061,COG0846@1,COG0846@2 NA|NA|NA K Sir2 family HOOMBAJD_02484 568703.LGG_01348 8.5e-63 246.1 Lactobacillaceae pcaC 4.1.1.44 ko:K01607 ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220 R03470 RC00938 ko00000,ko00001,ko01000 Bacteria 1V78I@1239,3F5I2@33958,4HKFY@91061,COG0599@1,COG0599@2 NA|NA|NA S Carboxymuconolactone decarboxylase family HOOMBAJD_02485 568703.LGG_01349 2.7e-64 251.1 Lactobacillaceae rmeD ko:K13640 ko00000,ko03000 Bacteria 1VB69@1239,3FC69@33958,4HN6R@91061,COG0789@1,COG0789@2 NA|NA|NA K helix_turn_helix, mercury resistance HOOMBAJD_02486 568703.LGG_01350 5.1e-311 1073.2 Lactobacillaceae yknV ko:K11085 ko02010,map02010 ko00000,ko00001,ko01000,ko02000 3.A.1.106 Bacteria 1TP0B@1239,3F3PD@33958,4HA3S@91061,COG1132@1,COG1132@2 NA|NA|NA V ABC transporter HOOMBAJD_02487 568703.LGG_01351 3.2e-197 694.5 Lactobacillaceae tig GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 ko:K03545 ko00000 Bacteria 1TQQ8@1239,3F40B@33958,4H9Q8@91061,COG0544@1,COG0544@2 NA|NA|NA D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase HOOMBAJD_02488 568703.LGG_01352 2.9e-232 810.8 Lactobacillaceae clpX GO:0000166,GO:0000502,GO:0002020,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009376,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0019899,GO:0019904,GO:0030163,GO:0030164,GO:0030312,GO:0030554,GO:0031333,GO:0031597,GO:0032271,GO:0032272,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0035639,GO:0036094,GO:0040007,GO:0042623,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0043254,GO:0043335,GO:0044087,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051301,GO:0051704,GO:0065007,GO:0070011,GO:0071704,GO:0071944,GO:0097159,GO:0097367,GO:0097718,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1904949,GO:1905368,GO:1905369 ko:K03544 ko04112,map04112 ko00000,ko00001,ko03110 Bacteria 1TQ00@1239,3F41K@33958,4H9U4@91061,COG1219@1,COG1219@2 NA|NA|NA O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP HOOMBAJD_02489 568703.LGG_01353 3.1e-107 394.4 Lactobacillaceae engB GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0017076,GO:0019001,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0097159,GO:0097367,GO:1901265,GO:1901363 ko:K03978 ko00000,ko03036 Bacteria 1TSPW@1239,3F44G@33958,4HBXZ@91061,COG0218@1,COG0218@2 NA|NA|NA D Necessary for normal cell division and for the maintenance of normal septation HOOMBAJD_02490 568703.LGG_01354 1e-47 195.7 Lactobacillaceae MA20_27270 Bacteria 1VIQA@1239,3F6WJ@33958,4HM6C@91061,COG1694@1,COG1694@2 NA|NA|NA S mazG nucleotide pyrophosphohydrolase HOOMBAJD_02491 568703.LGG_01355 2.3e-20 104.0 Lactobacillaceae Bacteria 1U8B8@1239,2AYHS@1,31QM8@2,3FASP@33958,4II98@91061 NA|NA|NA HOOMBAJD_02492 568703.LGG_01356 9.4e-259 899.0 Lactobacillaceae glnPH2 ko:K02029,ko:K02030,ko:K17073,ko:K17074 ko02010,map02010 M00236,M00589 ko00000,ko00001,ko00002,ko02000 3.A.1.3,3.A.1.3.20 Bacteria 1TPM3@1239,3F48Y@33958,4HAS2@91061,COG0765@1,COG0765@2,COG0834@1,COG0834@2 NA|NA|NA P ABC transporter permease HOOMBAJD_02493 568703.LGG_01357 2.4e-133 481.5 Lactobacillaceae glnQ 3.6.3.21 ko:K02028 M00236 ko00000,ko00002,ko01000,ko02000 3.A.1.3 Bacteria 1TNYD@1239,3F3QQ@33958,4H9WY@91061,COG1126@1,COG1126@2 NA|NA|NA E ABC transporter, ATP-binding protein HOOMBAJD_02494 568703.LGG_01358 0.0 1191.0 Lactobacillaceae uvrC ko:K03703 ko03420,map03420 ko00000,ko00001,ko03400 Bacteria 1TP4B@1239,3F3MY@33958,4H9QH@91061,COG0322@1,COG0322@2 NA|NA|NA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision HOOMBAJD_02495 568703.LGG_01359 0.0 1195.6 Lactobacillaceae fruA 2.7.1.194,2.7.1.200,2.7.1.202 ko:K02768,ko:K02769,ko:K02770,ko:K02773,ko:K02806,ko:K02821,ko:K03491 ko00051,ko00052,ko00053,ko01100,ko01120,ko02060,map00051,map00052,map00053,map01100,map01120,map02060 M00273,M00279,M00283,M00550 R03232,R05570,R07671 RC00017,RC03206 ko00000,ko00001,ko00002,ko01000,ko02000,ko03000 4.A.2.1,4.A.5.1,4.A.7.1 Bacteria 1TPKU@1239,3F44C@33958,4H9KR@91061,COG1299@1,COG1299@2,COG1445@1,COG1445@2,COG1762@1,COG1762@2 NA|NA|NA GT Phosphotransferase System HOOMBAJD_02496 568703.LGG_01360 9.4e-156 556.2 Lactobacillaceae pfkB 2.7.1.11,2.7.1.144,2.7.1.56 ko:K00882,ko:K00917,ko:K16370 ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130,map01200,map01230 M00001,M00345 R00756,R02071,R03236,R03237,R03238,R03239,R04779 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 Bacteria 1TQ36@1239,3F3SG@33958,4HANU@91061,COG1105@1,COG1105@2 NA|NA|NA H Belongs to the carbohydrate kinase PfkB family. LacC subfamily HOOMBAJD_02497 568703.LGG_01361 7.7e-132 476.5 Lactobacillaceae fruR ko:K03436 ko00000,ko03000 Bacteria 1TSF8@1239,3F3JB@33958,4HDT9@91061,COG1349@1,COG1349@2 NA|NA|NA K DeoR C terminal sensor domain HOOMBAJD_02498 1423732.BALS01000013_gene1567 1.9e-234 818.1 Lactobacillaceae obg GO:0000003,GO:0000160,GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0007154,GO:0007165,GO:0008150,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019954,GO:0023052,GO:0030436,GO:0032502,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035556,GO:0035639,GO:0036094,GO:0043021,GO:0043022,GO:0043167,GO:0043168,GO:0043934,GO:0044424,GO:0044464,GO:0044877,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0097159,GO:0097367,GO:1901265,GO:1901363 ko:K03979 ko00000,ko01000,ko03009 Bacteria 1TPX7@1239,3F4ZA@33958,4H9P8@91061,COG0536@1,COG0536@2 NA|NA|NA S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control HOOMBAJD_02499 568703.LGG_01363 0.0 1233.4 Lactobacillaceae oatA Bacteria 1TPTG@1239,3F3WT@33958,4HB7R@91061,COG1835@1,COG1835@2 NA|NA|NA I Acyltransferase HOOMBAJD_02500 568703.LGG_01364 1.5e-183 648.7 Lactobacillaceae rnz GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004527,GO:0004532,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016796,GO:0016891,GO:0016893,GO:0016896,GO:0031123,GO:0034414,GO:0034470,GO:0034641,GO:0034660,GO:0042779,GO:0042780,GO:0042781,GO:0043167,GO:0043169,GO:0043170,GO:0043628,GO:0044237,GO:0044238,GO:0046483,GO:0046872,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0090503,GO:0140098,GO:1901360,GO:1905267 3.1.26.11 ko:K00784 ko03013,map03013 ko00000,ko00001,ko01000,ko03016 Bacteria 1TRGP@1239,3F4F1@33958,4HABM@91061,COG1234@1,COG1234@2 NA|NA|NA J Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA HOOMBAJD_02501 568703.LGG_01365 1.9e-141 508.4 Lactobacillaceae XK27_05435 1.1.1.100 ko:K00059,ko:K07124 ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212 M00083,M00572 R04533,R04534,R04536,R04543,R04566,R04953,R04964,R07759,R07763,R10116,R10120,R11671 RC00029,RC00117 ko00000,ko00001,ko00002,ko01000,ko01004 Bacteria 1TSJ3@1239,3FC9J@33958,4HDU5@91061,COG0300@1,COG0300@2 NA|NA|NA S Enoyl-(Acyl carrier protein) reductase HOOMBAJD_02502 568703.LGG_01366 1.3e-46 192.2 Lactobacillaceae yrvD ko:K08992 ko00000 Bacteria 1VIG5@1239,3F7IW@33958,4HP5V@91061,COG5416@1,COG5416@2 NA|NA|NA S Lipopolysaccharide assembly protein A domain HOOMBAJD_02503 568703.LGG_01367 0.0 1444.5 Lactobacillaceae clpB GO:0003674,GO:0005488,GO:0005515,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0019538,GO:0042802,GO:0043170,GO:0044238,GO:0071704,GO:1901564 ko:K03694,ko:K03695 ko04213,map04213 ko00000,ko00001,ko03110 Bacteria 1TPMU@1239,3F3RV@33958,4HACY@91061,COG0542@1,COG0542@2 NA|NA|NA O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE HOOMBAJD_02504 1423732.BALS01000013_gene1573 3.5e-28 130.2 Lactobacillaceae rpmF GO:0000027,GO:0000302,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006950,GO:0006979,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009628,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042221,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050896,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1901700,GO:1990904 ko:K02911 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011,ko03029 Bacteria 1VKMZ@1239,3F7ZT@33958,4HR2Q@91061,COG0333@1,COG0333@2 NA|NA|NA J Belongs to the bacterial ribosomal protein bL32 family HOOMBAJD_02505 568703.LGG_01369 1.4e-93 349.0 Lactobacillaceae M1-874 ko:K13638,ko:K13640 ko00000,ko03000 Bacteria 1V7Z4@1239,3FB3S@33958,4HJXK@91061,COG0789@1,COG0789@2 NA|NA|NA K Domain of unknown function (DUF1836) HOOMBAJD_02506 568703.LGG_01370 1.8e-300 1037.7 Lactobacillaceae cpdB 3.1.3.6,3.1.4.16 ko:K01119 ko00230,ko00240,map00230,map00240 R01562,R01877,R02148,R02370,R03537,R03538,R03929,R05135 RC00078,RC00296 ko00000,ko00001,ko01000 Bacteria 1TPV2@1239,3FC24@33958,4HB9S@91061,COG0737@1,COG0737@2 NA|NA|NA F 5'-nucleotidase, C-terminal domain HOOMBAJD_02507 568703.LGG_01371 1.2e-144 519.2 Lactobacillaceae Bacteria 1VWGD@1239,2F31P@1,33VWT@2,3F4CP@33958,4HWD9@91061 NA|NA|NA HOOMBAJD_02508 1423732.BALS01000013_gene1578 6e-20 102.8 Lactobacillaceae Bacteria 1U6V1@1239,2BAS8@1,3247E@2,3F8J0@33958,4IGNY@91061 NA|NA|NA S Protein of unknown function (DUF2929) HOOMBAJD_02509 568703.LGG_01373 0.0 2151.3 Lactobacillaceae dnaE 2.7.7.7 ko:K02337 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Bacteria 1TPYG@1239,3F4AM@33958,4H9T3@91061,COG0587@1,COG0587@2 NA|NA|NA L DNA polymerase HOOMBAJD_02510 568703.LGG_01374 3.5e-177 627.5 Lactobacillaceae pfkA GO:0003674,GO:0003824,GO:0003872,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006116,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008443,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016052,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017144,GO:0018130,GO:0019200,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019674,GO:0019693,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046835,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0061615,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576 2.7.1.11 ko:K00850 ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04152,ko05230,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04152,map05230 M00001,M00345 R00756,R03236,R03237,R03238,R03239,R04779 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000,ko01009,ko03019 iYO844.BSU29190 Bacteria 1TPF4@1239,3F4CC@33958,4HAPN@91061,COG0205@1,COG0205@2 NA|NA|NA F Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis HOOMBAJD_02511 568703.LGG_01375 0.0 1130.2 Lactobacillaceae pyk GO:0001871,GO:0003674,GO:0003824,GO:0004743,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006116,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009266,GO:0009408,GO:0009628,GO:0009986,GO:0009987,GO:0016043,GO:0016052,GO:0016053,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019674,GO:0019693,GO:0019752,GO:0022607,GO:0030246,GO:0030247,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042802,GO:0042866,GO:0043436,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0050896,GO:0051186,GO:0051188,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055086,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:2001065 2.7.1.40,2.7.7.4 ko:K00873,ko:K00958 ko00010,ko00230,ko00261,ko00450,ko00620,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00261,map00450,map00620,map00920,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230 M00001,M00002,M00049,M00050,M00176,M00596 R00200,R00430,R00529,R01138,R01858,R02320,R04929 RC00002,RC00015,RC02809,RC02889 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 iECO103_1326.ECO103_1819,iPC815.YPO2393 Bacteria 1TPGG@1239,3F3JU@33958,4H9VY@91061,COG0469@1,COG0469@2 NA|NA|NA G Belongs to the pyruvate kinase family HOOMBAJD_02512 568703.LGG_01376 1.9e-72 278.5 Lactobacillaceae yeaL GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 Bacteria 1V7JN@1239,3FB78@33958,4IRT9@91061,COG2707@1,COG2707@2 NA|NA|NA S Protein of unknown function (DUF441) HOOMBAJD_02513 568703.LGG_01377 6.9e-164 583.2 Lactobacillaceae cvfB ko:K00243 ko00000 Bacteria 1TQ1Z@1239,3F44W@33958,4HDAZ@91061,COG2996@1,COG2996@2 NA|NA|NA S S1 domain HOOMBAJD_02514 568703.LGG_01378 3.3e-166 590.9 Lactobacillaceae xerD ko:K03733,ko:K04763 ko00000,ko03036 Bacteria 1TQRG@1239,3F3V9@33958,4HAEX@91061,COG4974@1,COG4974@2 NA|NA|NA D recombinase XerD HOOMBAJD_02515 568703.LGG_01379 3.4e-67 260.8 Lactobacillaceae ribT ko:K02859 ko00000 Bacteria 1VAD7@1239,3F7QC@33958,4HKR2@91061,COG0454@1,COG0456@2 NA|NA|NA K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases HOOMBAJD_02516 568703.LGG_01380 1.6e-126 458.8 Lactobacillaceae scpA GO:0003674,GO:0005488,GO:0005515,GO:0042802 ko:K05896 ko00000,ko03036 Bacteria 1TRW3@1239,3FCCZ@33958,4HA6Q@91061,COG1354@1,COG1354@2 NA|NA|NA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves HOOMBAJD_02517 568703.LGG_01381 3.3e-104 384.4 Lactobacillaceae scpB GO:0003674,GO:0005488,GO:0005515,GO:0042802 ko:K06024 ko00000,ko03036 Bacteria 1V6HI@1239,3F5RN@33958,4HIQ0@91061,COG1386@1,COG1386@2 NA|NA|NA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves HOOMBAJD_02518 568703.LGG_01382 9.4e-138 496.1 Lactobacillaceae rluB GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 5.4.99.19,5.4.99.21,5.4.99.22 ko:K06178,ko:K06182,ko:K06183 ko00000,ko01000,ko03009 Bacteria 1TP68@1239,3F402@33958,4H9MU@91061,COG1187@1,COG1187@2 NA|NA|NA J Belongs to the pseudouridine synthase RsuA family HOOMBAJD_02519 568703.LGG_01383 2.4e-96 358.2 Lactobacillaceae Bacteria 1V4BW@1239,3F4HD@33958,4HHFT@91061,COG3601@1,COG3601@2 NA|NA|NA U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins HOOMBAJD_02520 568703.LGG_01384 1.4e-45 188.3 Lactobacillaceae fer ko:K05337 ko00000 Bacteria 1VAC2@1239,3F7KF@33958,4HKG7@91061,COG1141@1,COG1141@2 NA|NA|NA C 4Fe-4S single cluster domain of Ferredoxin I HOOMBAJD_02521 568703.LGG_01385 4.4e-183 647.1 Lactobacillaceae ypbB 5.1.3.1 ko:K01783 ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230 M00004,M00007 R01529 RC00540 ko00000,ko00001,ko00002,ko01000 Bacteria 1TQU9@1239,3F45N@33958,4HJ71@91061,COG4955@1,COG4955@2 NA|NA|NA S Helix-turn-helix domain HOOMBAJD_02522 568703.LGG_01386 1.9e-264 917.9 Lactobacillaceae recQ1 3.6.4.12 ko:K03654 ko03018,map03018 ko00000,ko00001,ko01000,ko03400 Bacteria 1TPN5@1239,3F4PY@33958,4H9QP@91061,COG0514@1,COG0514@2 NA|NA|NA L ATP-dependent DNA helicase RecQ HOOMBAJD_02523 568703.LGG_01387 3.8e-55 221.5 Lactobacillaceae Bacteria 1VFEU@1239,3F6WV@33958,4HNW5@91061,COG1388@1,COG1388@2 NA|NA|NA M Lysin motif HOOMBAJD_02524 568703.LGG_01388 7.7e-115 419.9 Lactobacillaceae cmk GO:0003674,GO:0003824,GO:0004127,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006573,GO:0006575,GO:0006725,GO:0006732,GO:0006753,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009117,GO:0009123,GO:0009165,GO:0009314,GO:0009628,GO:0009987,GO:0010165,GO:0010212,GO:0015939,GO:0015940,GO:0015949,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0034654,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046939,GO:0046940,GO:0050145,GO:0050896,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 1.17.7.4,2.5.1.19,2.7.1.26,2.7.4.25,2.7.7.2,6.3.2.1 ko:K00800,ko:K00945,ko:K02945,ko:K03527,ko:K03977,ko:K11753,ko:K13799 ko00240,ko00400,ko00410,ko00740,ko00770,ko00900,ko01100,ko01110,ko01130,ko01230,ko03010,map00240,map00400,map00410,map00740,map00770,map00900,map01100,map01110,map01130,map01230,map03010 M00022,M00052,M00096,M00119,M00125,M00178 R00158,R00161,R00512,R00549,R01665,R02473,R03460,R05884,R08210 RC00002,RC00017,RC00096,RC00141,RC00350,RC01137,RC01487 br01610,ko00000,ko00001,ko00002,ko01000,ko03009,ko03011 iPC815.YPO1391,iSDY_1059.SDY_2348 Bacteria 1V3IA@1239,3F3W4@33958,4HFZE@91061,COG0283@1,COG0283@2 NA|NA|NA F Belongs to the cytidylate kinase family. Type 1 subfamily HOOMBAJD_02525 568703.LGG_01523 1.1e-112 412.5 Bacilli Bacteria 1TTBV@1239,4HBWT@91061,COG4733@1,COG4733@2,COG4926@1,COG4926@2 NA|NA|NA S cellulase activity HOOMBAJD_02526 568703.LGG_02944 5.3e-21 105.9 Lactobacillaceae Bacteria 1TT8V@1239,3F7HJ@33958,4HCE5@91061,COG2801@1,COG2801@2 NA|NA|NA L PFAM Integrase core domain HOOMBAJD_02527 568703.LGG_02452 6.4e-34 149.4 Lactobacillaceae Bacteria 1U6KC@1239,29PH8@1,30AFD@2,3F83D@33958,4IGD6@91061 NA|NA|NA HOOMBAJD_02528 568703.LGG_02451 1.3e-125 455.7 Lactobacillaceae devA 3.6.3.25 ko:K02003,ko:K06020,ko:K09810 ko02010,map02010 M00255,M00258 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1,3.A.1.125 Bacteria 1UYJ6@1239,3F5SR@33958,4HF89@91061,COG1136@1,COG1136@2 NA|NA|NA V ATPases associated with a variety of cellular activities HOOMBAJD_02529 568703.LGG_02450 9.4e-184 649.4 Lactobacillaceae yxeA ko:K02004 M00258 ko00000,ko00002,ko02000 3.A.1 Bacteria 1TVQ4@1239,3FBQ0@33958,4IRU4@91061,COG0577@1,COG0577@2 NA|NA|NA V FtsX-like permease family HOOMBAJD_02530 568703.LGG_02449 4.8e-103 380.6 Lactobacillaceae ko:K09017 ko00000,ko03000 Bacteria 1VD4H@1239,3F5VC@33958,4HNBF@91061,COG1309@1,COG1309@2 NA|NA|NA K Bacterial regulatory proteins, tetR family HOOMBAJD_02531 1423816.BACQ01000059_gene2258 7e-80 303.1 Lactobacillaceae rplM GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006417,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015934,GO:0016020,GO:0017148,GO:0019222,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0030312,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046872,GO:0046914,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0070180,GO:0071704,GO:0071944,GO:0080090,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904,GO:2000112,GO:2000113 ko:K02871 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1V3HX@1239,3F696@33958,4HG0I@91061,COG0102@1,COG0102@2 NA|NA|NA J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly HOOMBAJD_02532 1423732.BALS01000005_gene1111 1.1e-65 255.8 Lactobacillaceae rpsI GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02996 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1V3MQ@1239,3F656@33958,4HH3B@91061,COG0103@1,COG0103@2 NA|NA|NA J Belongs to the universal ribosomal protein uS9 family HOOMBAJD_02533 568703.LGG_02444 8e-208 729.6 Lactobacillaceae ko:K08217 br01600,ko00000,ko01504,ko02000 2.A.1.21.1,2.A.1.21.22 Bacteria 1UHQE@1239,3FBVQ@33958,4IS66@91061,COG0477@1,COG0477@2 NA|NA|NA EGP Transmembrane secretion effector HOOMBAJD_02534 568703.LGG_02443 0.0 1118.6 Lactobacillaceae ko:K06147 ko00000,ko02000 3.A.1.106,3.A.1.109,3.A.1.21 Bacteria 1TPZP@1239,3F5Y6@33958,4HDMH@91061,COG1132@1,COG1132@2 NA|NA|NA V ATPases associated with a variety of cellular activities HOOMBAJD_02535 568703.LGG_02442 0.0 1120.5 Lactobacillaceae ko:K06147 ko00000,ko02000 3.A.1.106,3.A.1.109,3.A.1.21 Bacteria 1TPZP@1239,3F5RW@33958,4HDMH@91061,COG1132@1,COG1132@2 NA|NA|NA V ABC transporter HOOMBAJD_02536 1423775.BAMN01000002_gene2083 8.6e-15 85.9 Lactobacillaceae Bacteria 1U8JQ@1239,2DK9P@1,308YB@2,3FB25@33958,4IIHP@91061 NA|NA|NA HOOMBAJD_02537 220668.lp_2882 3.3e-29 134.4 Lactobacillaceae ko:K07171 ko00000,ko01000,ko02048 Bacteria 1VE5S@1239,3F7H4@33958,4HMT4@91061,COG2337@1,COG2337@2 NA|NA|NA T PemK-like, MazF-like toxin of type II toxin-antitoxin system HOOMBAJD_02539 568703.LGG_02440 3.8e-122 444.1 Lactobacillaceae Bacteria 1V50R@1239,3FC8T@33958,4IR12@91061,COG3382@1,COG3382@2 NA|NA|NA S B3/4 domain HOOMBAJD_02540 568703.LGG_02439 6e-146 523.5 Lactobacillaceae ssuC ko:K15554 ko00920,ko02010,map00920,map02010 M00436 ko00000,ko00001,ko00002,ko02000 3.A.1.17.2 Bacteria 1TQ26@1239,3F4W8@33958,4HCJ7@91061,COG0600@1,COG0600@2 NA|NA|NA U Binding-protein-dependent transport system inner membrane component HOOMBAJD_02541 568703.LGG_02438 1.3e-120 439.1 Lactobacillaceae ssuB GO:0000166,GO:0003674,GO:0005488,GO:0005524,GO:0008144,GO:0017076,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0097159,GO:0097367,GO:1901265,GO:1901363 ko:K02049,ko:K15555 ko00920,ko02010,map00920,map02010 M00188,M00436 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.16,3.A.1.17,3.A.1.17.2 Bacteria 1TRE2@1239,3F5YE@33958,4HAHM@91061,COG1116@1,COG1116@2 NA|NA|NA P ATPases associated with a variety of cellular activities HOOMBAJD_02542 568703.LGG_02437 3.4e-233 813.9 Lactobacillaceae yfiQ Bacteria 1V8A9@1239,3F5JA@33958,4HJ67@91061,COG1835@1,COG1835@2 NA|NA|NA I Acyltransferase family HOOMBAJD_02543 568703.LGG_02436 1.4e-292 1011.5 Lactobacillaceae 6.2.1.3,6.2.1.8 ko:K01897,ko:K22133 ko00061,ko00071,ko00630,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map00630,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920 M00086 R01280,R01558 RC00004,RC00014,RC00179 ko00000,ko00001,ko00002,ko01000,ko01004,ko04147 4.C.1.1 Bacteria 1TPSX@1239,3FC48@33958,4HA2G@91061,COG0318@1,COG0318@2 NA|NA|NA IQ AMP-binding enzyme C-terminal domain HOOMBAJD_02544 568703.LGG_02435 1.6e-169 602.1 Lactobacillaceae ssuA ko:K15553 ko00920,ko02010,map00920,map02010 M00436 ko00000,ko00001,ko00002,ko02000 3.A.1.17.2 Bacteria 1TPI2@1239,3F4DK@33958,4HDP6@91061,COG0715@1,COG0715@2 NA|NA|NA P NMT1-like family HOOMBAJD_02545 568703.LGG_02433 0.0 1839.7 Lactobacillaceae 3.2.1.40 ko:K05989 ko00000,ko01000 Bacteria 1TSVY@1239,3F4M6@33958,4HWSX@91061,COG3408@1,COG3408@2 NA|NA|NA G Bacterial alpha-L-rhamnosidase concanavalin-like domain HOOMBAJD_02546 568703.LGG_02432 1.4e-286 991.5 Lactobacillaceae ko:K03292,ko:K16210 ko00000,ko02000 2.A.2,2.A.2.5 Bacteria 1U037@1239,3F4MV@33958,4HBZK@91061,COG2211@1,COG2211@2 NA|NA|NA G MFS/sugar transport protein HOOMBAJD_02547 568703.LGG_02431 1.2e-65 255.8 Lactobacillaceae crcB ko:K06199 ko00000,ko02000 1.A.43.1,1.A.43.2,1.A.43.3 Bacteria 1U4G6@1239,3F6R4@33958,4IE88@91061,COG0239@1,COG0239@2 NA|NA|NA U Important for reducing fluoride concentration in the cell, thus reducing its toxicity HOOMBAJD_02548 568703.LGG_02430 3.4e-53 214.2 Lactobacillaceae crcB GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015103,GO:0015318,GO:0015698,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098656,GO:0098660,GO:0098661,GO:1903424,GO:1903425 ko:K06199 ko00000,ko02000 1.A.43.1,1.A.43.2,1.A.43.3 Bacteria 1VM30@1239,3F8A8@33958,4HRC4@91061,COG0239@1,COG0239@2 NA|NA|NA U Important for reducing fluoride concentration in the cell, thus reducing its toxicity HOOMBAJD_02550 568703.LGG_02427 1.8e-19 100.9 Lactobacillaceae Bacteria 1U8AT@1239,29QM9@1,30BKW@2,3FAS5@33958,4II8S@91061 NA|NA|NA HOOMBAJD_02551 568703.LGG_02426 1.3e-162 578.9 Lactobacillaceae znuA ko:K02077 M00244 ko00000,ko00002,ko02000 3.A.1.15 Bacteria 1V110@1239,3FBJR@33958,4HZ7G@91061,COG0803@1,COG0803@2 NA|NA|NA P Belongs to the bacterial solute-binding protein 9 family HOOMBAJD_02552 568703.LGG_02425 2.4e-66 258.1 Lactobacillaceae Bacteria 1U7MC@1239,29Q79@1,30B6A@2,3F9WH@33958,4IHIH@91061 NA|NA|NA HOOMBAJD_02553 568703.LGG_02424 1.4e-118 432.2 Lactobacillaceae Bacteria 1UJSC@1239,3F4ZZ@33958,4HCVT@91061,COG0702@1,COG0702@2 NA|NA|NA GM NmrA-like family HOOMBAJD_02554 568703.LGG_02423 7.7e-166 589.7 Lactobacillaceae znuA ko:K02077 M00244 ko00000,ko00002,ko02000 3.A.1.15 Bacteria 1V110@1239,3FBJR@33958,4HZ7G@91061,COG0803@1,COG0803@2 NA|NA|NA P Belongs to the bacterial solute-binding protein 9 family HOOMBAJD_02555 568703.LGG_02422 2.7e-42 177.6 Lactobacillaceae rpsN GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030312,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02954 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1VEF6@1239,3F7KX@33958,4HKK1@91061,COG0199@1,COG0199@2 NA|NA|NA J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site HOOMBAJD_02556 568703.LGG_02421 1.9e-130 471.9 Lactobacillaceae mntB 3.6.3.35 ko:K02074,ko:K11710,ko:K19973 ko02010,map02010 M00244,M00319,M00792 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.15,3.A.1.15.15 Bacteria 1TQJ3@1239,3F4VW@33958,4HA2W@91061,COG1121@1,COG1121@2 NA|NA|NA P ABC transporter HOOMBAJD_02557 568703.LGG_02420 9.5e-145 519.6 Lactobacillaceae mtsB GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0010035,GO:0010038,GO:0010043,GO:0016020,GO:0042221,GO:0044464,GO:0050896,GO:0071944 ko:K09819,ko:K19975,ko:K19976 ko02010,map02010 M00243,M00792 ko00000,ko00001,ko00002,ko02000 3.A.1.15,3.A.1.15.15 Bacteria 1TPZB@1239,3F4JM@33958,4HBD7@91061,COG1108@1,COG1108@2 NA|NA|NA U ABC 3 transport family HOOMBAJD_02558 568703.LGG_02419 1.6e-174 618.6 Lactobacillaceae sitA GO:0005575,GO:0005623,GO:0008150,GO:0009987,GO:0010035,GO:0010038,GO:0010039,GO:0042221,GO:0042597,GO:0044464,GO:0050896,GO:0051716,GO:0070887,GO:0071241,GO:0071248,GO:0071281 ko:K09818,ko:K11601,ko:K11604,ko:K19975,ko:K19976 ko02010,ko02020,map02010,map02020 M00243,M00316,M00317,M00792 ko00000,ko00001,ko00002,ko02000 3.A.1.15,3.A.1.15.1,3.A.1.15.15,3.A.1.15.7,3.A.1.15.9 iECED1_1282.ECED1_1296 Bacteria 1TRKU@1239,3F4B9@33958,4HAKT@91061,COG0803@1,COG0803@2 NA|NA|NA P Belongs to the bacterial solute-binding protein 9 family HOOMBAJD_02559 568703.LGG_02418 8.7e-51 206.1 Lactobacillaceae czrA ko:K21903,ko:K22043 ko00000,ko03000 Bacteria 1VA6G@1239,3F7DH@33958,4HKYT@91061,COG0640@1,COG0640@2 NA|NA|NA K Transcriptional regulator, ArsR family HOOMBAJD_02560 568703.LGG_02417 1.7e-111 408.7 Lactobacillaceae 2.5.1.105 ko:K04088,ko:K06897 ko00790,map00790 M00742 R10339 RC00121 ko00000,ko00001,ko00002,ko01000 Bacteria 1V9B6@1239,3F4M1@33958,4HJTJ@91061,COG0053@1,COG0053@2 NA|NA|NA P Cation efflux family HOOMBAJD_02561 568703.LGG_02416 1e-24 118.6 Lactobacillaceae Bacteria 1VZEN@1239,2FB4N@1,343B1@2,3F944@33958,4HYPA@91061 NA|NA|NA HOOMBAJD_02562 568703.LGG_02415 2.1e-311 1074.7 Lactobacillaceae mco Bacteria 1TQSU@1239,3F3XB@33958,4HDD6@91061,COG2132@1,COG2132@2 NA|NA|NA Q Multicopper oxidase HOOMBAJD_02563 568703.LGG_02414 6.5e-227 793.1 Lactobacillaceae Bacteria 1UJ8F@1239,3FBUG@33958,4IT4C@91061,COG0477@1,COG0477@2 NA|NA|NA EGP Major Facilitator Superfamily HOOMBAJD_02564 568703.LGG_02413 9.8e-64 249.2 Lactobacillaceae Bacteria 1U7IM@1239,29PE3@1,32D7A@2,3F9RV@33958,4IHFA@91061 NA|NA|NA HOOMBAJD_02565 568703.LGG_02412 0.0 1659.8 Lactobacillaceae pacL Bacteria 1TPF5@1239,3F3KP@33958,4H9S5@91061,COG0474@1,COG0474@2 NA|NA|NA P P-type ATPase HOOMBAJD_02566 568703.LGG_02411 5.3e-279 966.5 Lactobacillaceae mntH GO:0008150,GO:0009987,GO:0010035,GO:0010038,GO:0010039,GO:0042221,GO:0050896,GO:0051716,GO:0070887,GO:0071241,GO:0071248,GO:0071281 ko:K03322 ko00000,ko02000 2.A.55.2.6,2.A.55.3 Bacteria 1TPT1@1239,3F49Y@33958,4HAEA@91061,COG1914@1,COG1914@2 NA|NA|NA P H( )-stimulated, divalent metal cation uptake system HOOMBAJD_02567 568703.LGG_02410 2e-17 94.0 Lactobacillaceae Bacteria 1U8AV@1239,2BSE3@1,32MG2@2,3FASA@33958,4II8V@91061 NA|NA|NA HOOMBAJD_02568 568703.LGG_00891 2e-08 64.7 Lactobacillaceae Bacteria 1U8CV@1239,2BT3F@1,32N80@2,3FAUG@33958,4IIAU@91061 NA|NA|NA HOOMBAJD_02569 568703.LGG_02407 2.1e-133 481.9 Lactobacillaceae Bacteria 1U7C1@1239,29Q1N@1,30B08@2,3F9BP@33958,4IH7B@91061 NA|NA|NA HOOMBAJD_02570 568703.LGG_02406 9.5e-253 879.0 Lactobacillaceae fumC GO:0003674,GO:0003824,GO:0004333,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006106,GO:0006108,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016829,GO:0016835,GO:0016836,GO:0016999,GO:0017144,GO:0019752,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0055114,GO:0071704,GO:0072350 4.2.1.2 ko:K01679 ko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko04934,ko05200,ko05211,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200,map04934,map05200,map05211 M00009,M00011,M00173,M00376 R01082 RC00443 ko00000,ko00001,ko00002,ko01000 Bacteria 1UHPH@1239,3F3K0@33958,4HA6P@91061,COG0114@1,COG0114@2 NA|NA|NA C Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate HOOMBAJD_02571 568703.LGG_02405 1.3e-16 92.4 Lactobacillaceae Bacteria 1U6IN@1239,29PFU@1,30ADZ@2,3F7ZS@33958,4IGB1@91061 NA|NA|NA S Short C-terminal domain HOOMBAJD_02572 568703.LGG_02404 4.5e-216 756.9 Lactobacillaceae yqiG Bacteria 1TPM6@1239,3F3UQ@33958,4HAS5@91061,COG1902@1,COG1902@2 NA|NA|NA C Oxidoreductase HOOMBAJD_02573 568703.LGG_02403 7.1e-130 469.9 Lactobacillaceae Bacteria 1TRHF@1239,3F468@33958,4HBXH@91061,COG4221@1,COG4221@2 NA|NA|NA S Belongs to the short-chain dehydrogenases reductases (SDR) family HOOMBAJD_02574 568703.LGG_02401 1.7e-179 635.2 Lactobacillaceae Bacteria 1TQ12@1239,3F4U1@33958,4HA57@91061,COG4989@1,COG4989@2 NA|NA|NA S Aldo keto reductase HOOMBAJD_02575 568703.LGG_02400 1.9e-53 214.9 Lactobacillaceae Bacteria 1W39Y@1239,2CCCW@1,2ZFAQ@2,3F8D6@33958,4I054@91061 NA|NA|NA S Enterocin A Immunity HOOMBAJD_02576 568703.LGG_02399 2.4e-53 214.5 Lactobacillaceae Bacteria 1U77W@1239,29PYM@1,30AX3@2,3F935@33958,4IH2P@91061 NA|NA|NA HOOMBAJD_02577 568703.LGG_02398 6.4e-252 876.3 Lactobacillaceae Bacteria 1UHNW@1239,3FCCP@33958,4IS4S@91061,COG0477@1,COG0477@2 NA|NA|NA EGP Major Facilitator Superfamily HOOMBAJD_02578 568703.LGG_02397 9.3e-69 266.2 Lactobacillaceae Bacteria 1VG8M@1239,3F6QY@33958,4HYHM@91061,COG1959@1,COG1959@2 NA|NA|NA K Transcriptional regulator HOOMBAJD_02579 568703.LGG_02395 4.4e-133 480.7 Lactobacillaceae ko:K07052 ko00000 Bacteria 1W74D@1239,3F80E@33958,4HXYG@91061,COG1266@1,COG1266@2 NA|NA|NA S CAAX protease self-immunity HOOMBAJD_02583 568703.LGG_02391 5.8e-21 105.9 Lactobacillaceae Bacteria 1U866@1239,2AIQB@1,31972@2,3FAKI@33958,4II3R@91061 NA|NA|NA HOOMBAJD_02584 568703.LGG_02390 1.9e-44 184.9 Lactobacillaceae spiA Bacteria 1W5QW@1239,2EQ91@1,33HV8@2,3FBUP@33958,4I1R5@91061 NA|NA|NA S Enterocin A Immunity HOOMBAJD_02585 568703.LGG_02388 7.3e-133 479.9 Lactobacillaceae plnD ko:K07707 ko02020,ko02024,map02020,map02024 M00495 ko00000,ko00001,ko00002,ko02022 Bacteria 1V392@1239,3F3VI@33958,4HHAI@91061,COG3279@1,COG3279@2 NA|NA|NA K LytTr DNA-binding domain HOOMBAJD_02586 568703.LGG_02387 3.3e-218 764.2 Bacilli 2.7.13.3 ko:K02476,ko:K07706 ko02020,ko02024,map02020,map02024 M00495 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Bacteria 1UYTM@1239,4HH4V@91061,COG3290@1,COG3290@2 NA|NA|NA T ATPase histidine kinase DNA gyrase B HSP90 domain protein HOOMBAJD_02588 568703.LGG_02386 0.0 1387.1 Lactobacillaceae comA GO:0003674,GO:0003824,GO:0005215,GO:0005319,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006869,GO:0008150,GO:0010876,GO:0015399,GO:0015405,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0033036,GO:0034040,GO:0042623,GO:0042626,GO:0043492,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944 ko:K06147,ko:K06148,ko:K12292,ko:K20344 ko02010,ko02020,ko02024,map02010,map02020,map02024 ko00000,ko00001,ko01000,ko02000 3.A.1,3.A.1.106,3.A.1.109,3.A.1.112,3.A.1.112.1,3.A.1.21 Bacteria 1V77J@1239,3F3QF@33958,4HAX2@91061,COG2274@1,COG2274@2 NA|NA|NA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain HOOMBAJD_02589 568703.LGG_02385 2.9e-225 787.7 Lactobacillaceae mesE GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K12293,ko:K20345 ko02020,ko02024,map02020,map02024 ko00000,ko00001,ko02000 3.A.1.112,8.A.1,8.A.1.4.2 Bacteria 1V5C8@1239,3F5W4@33958,4HHKB@91061,COG0845@1,COG0845@2 NA|NA|NA M Transport protein ComB HOOMBAJD_02590 568703.LGG_02384 7e-59 233.0 Lactobacillaceae Bacteria 1U8E8@1239,2BTF9@1,32NMI@2,3FAW0@33958,4IIC5@91061 NA|NA|NA HOOMBAJD_02591 568703.LGG_02383 2.5e-253 880.9 Lactobacillaceae yjjP Bacteria 1TNZH@1239,3F4FR@33958,4HU4D@91061,COG2966@1,COG2966@2,COG3610@1,COG3610@2 NA|NA|NA S Putative threonine/serine exporter HOOMBAJD_02592 568703.LGG_02381 2.7e-186 657.9 Lactobacillaceae tas Bacteria 1UKPC@1239,3F5X5@33958,4HCF8@91061,COG0667@1,COG0667@2 NA|NA|NA C Aldo/keto reductase family HOOMBAJD_02593 568703.LGG_02380 9e-44 182.6 Lactobacillaceae Bacteria 1W247@1239,2DEZ9@1,2ZPV3@2,3F8UH@33958,4I0IP@91061 NA|NA|NA S Enterocin A Immunity HOOMBAJD_02594 568703.LGG_02379 6.6e-134 483.4 Lactobacillaceae Bacteria 1U76R@1239,2AG9B@1,316EU@2,3F91S@33958,4IH1J@91061 NA|NA|NA HOOMBAJD_02595 568703.LGG_02378 3.5e-135 487.6 Lactobacillaceae Bacteria 1U7AB@1239,2AG9B@1,30AYZ@2,3F976@33958,4IH59@91061 NA|NA|NA HOOMBAJD_02596 568703.LGG_02377 1.4e-56 225.3 Lactobacillaceae ko:K10947 ko00000,ko03000 Bacteria 1VAGB@1239,3F7N2@33958,4HKBS@91061,COG1695@1,COG1695@2 NA|NA|NA K Transcriptional regulator PadR-like family HOOMBAJD_02597 568703.LGG_02376 4.1e-97 360.9 Lactobacillaceae Bacteria 1VEKB@1239,3F84P@33958,4HH0D@91061,COG1476@1,COG1476@2 NA|NA|NA K Helix-turn-helix XRE-family like proteins HOOMBAJD_02598 568703.LGG_02375 1.8e-206 724.9 Lactobacillaceae MA20_36090 Bacteria 1UF81@1239,3FBVJ@33958,4HI1Q@91061,COG1073@1,COG1073@2 NA|NA|NA S Protein of unknown function (DUF2974) HOOMBAJD_02599 568703.LGG_02374 4.3e-225 786.9 Lactobacillaceae ko:K09384 ko00000 Bacteria 1TPQU@1239,3F47M@33958,4HBI0@91061,COG3410@1,COG3410@2 NA|NA|NA N Uncharacterized conserved protein (DUF2075) HOOMBAJD_02600 568703.LGG_02373 3.3e-103 380.9 Lactobacillaceae Bacteria 1UPXG@1239,2AYWY@1,31R2N@2,3F66A@33958,4IVCM@91061 NA|NA|NA HOOMBAJD_02601 568703.LGG_02372 0.0 1857.8 Lactobacillaceae Bacteria 1VRZM@1239,3F8GT@33958,4HTFC@91061,COG4932@1,COG4932@2 NA|NA|NA M domain protein HOOMBAJD_02602 568703.LGG_02371 5.1e-259 899.8 Lactobacillaceae Bacteria 1VSXA@1239,3F4SG@33958,4HTS0@91061,COG4932@1,COG4932@2 NA|NA|NA M domain protein HOOMBAJD_02603 568703.LGG_02370 8.4e-290 1002.3 Lactobacillaceae Bacteria 1UY9B@1239,3F6KV@33958,4HW31@91061,COG4932@1,COG4932@2 NA|NA|NA M Cna protein B-type domain HOOMBAJD_02604 568703.LGG_02369 3.2e-128 464.5 Lactobacillaceae 3.4.22.70 ko:K07284 ko00000,ko01000,ko01002,ko01011 Bacteria 1UN9R@1239,3FCAD@33958,4HG4C@91061,COG3764@1,COG3764@2 NA|NA|NA M Sortase family HOOMBAJD_02606 889201.HMPREF9422_0823 3.1e-55 221.9 Bacilli macB ko:K02003 M00258 ko00000,ko00002,ko02000 3.A.1 Bacteria 1TPBJ@1239,4HBMF@91061,COG1136@1,COG1136@2 NA|NA|NA V ABC transporter, ATP-binding protein HOOMBAJD_02607 883081.HMPREF9698_00727 9.8e-33 147.9 Carnobacteriaceae bacI ko:K02004 M00258 ko00000,ko00002,ko02000 3.A.1 Bacteria 1TPUU@1239,27FCG@186828,4HBY9@91061,COG0577@1,COG0577@2 NA|NA|NA V MacB-like periplasmic core domain HOOMBAJD_02608 568703.LGG_02368 8.7e-93 346.3 Lactobacillaceae Bacteria 1U7IZ@1239,29Q5T@1,30B4Q@2,3F9SF@33958,4IHFS@91061 NA|NA|NA HOOMBAJD_02609 568703.LGG_02366 3e-148 531.2 Lactobacillaceae proB GO:0003674,GO:0003824,GO:0004349,GO:0004350,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006560,GO:0006561,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016491,GO:0016620,GO:0016740,GO:0016772,GO:0016774,GO:0016903,GO:0018130,GO:0019202,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.11 ko:K00931 ko00330,ko00332,ko01100,ko01130,ko01230,map00330,map00332,map01100,map01130,map01230 M00015 R00239 RC00002,RC00043 ko00000,ko00001,ko00002,ko01000 Bacteria 1TPG6@1239,3F4E1@33958,4HA9B@91061,COG0263@1,COG0263@2 NA|NA|NA F Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate HOOMBAJD_02610 568703.LGG_02365 2e-225 788.1 Lactobacillaceae proA GO:0003674,GO:0003824,GO:0004350,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006560,GO:0006561,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016491,GO:0016620,GO:0016903,GO:0017144,GO:0018130,GO:0019752,GO:0042802,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0055114,GO:0055129,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.2.1.41 ko:K00147 ko00330,ko00332,ko01100,ko01110,ko01130,ko01230,map00330,map00332,map01100,map01110,map01130,map01230 M00015 R03313 RC00684 ko00000,ko00001,ko00002,ko01000 iB21_1397.B21_00243,iECBD_1354.ECBD_3376,iECB_1328.ECB_00240,iECD_1391.ECD_00240,iLJ478.TM0293,iYL1228.KPN_00280,iYO844.BSU13130 Bacteria 1TQ9V@1239,3F3W7@33958,4HB7B@91061,COG0014@1,COG0014@2 NA|NA|NA E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate HOOMBAJD_02611 568703.LGG_02364 4.9e-224 783.5 Lactobacillaceae pimH Bacteria 1TRUT@1239,3F5PJ@33958,4HFIF@91061,COG0477@1,COG2814@2 NA|NA|NA EGP Major facilitator Superfamily HOOMBAJD_02612 568703.LGG_02362 7.4e-34 149.4 Lactobacillaceae Bacteria 1U6Y5@1239,2DKSV@1,30APG@2,3F8PU@33958,4IGSB@91061 NA|NA|NA HOOMBAJD_02613 568703.LGG_02361 2.5e-32 144.1 Lactobacillaceae Bacteria 1U6Z6@1239,29PRZ@1,30AQ7@2,3F8RC@33958,4IGTF@91061 NA|NA|NA HOOMBAJD_02614 575605.ACQN01000041_gene998 5.4e-08 63.5 Lactobacillaceae Bacteria 1U6CF@1239,2DKPT@1,30A91@2,3F7KP@33958,4IG44@91061 NA|NA|NA HOOMBAJD_02615 543734.LCABL_25300 5.3e-95 354.8 Lactobacillaceae ko:K02647,ko:K09684 ko00000,ko03000 Bacteria 1UKTM@1239,3F4E9@33958,4HY2V@91061,COG3835@1,COG3835@2 NA|NA|NA KT Purine catabolism regulatory protein-like family HOOMBAJD_02616 543734.LCABL_25290 7.3e-172 610.1 Lactobacillaceae Bacteria 1TQM0@1239,3F3SE@33958,4HATA@91061,COG0477@1,COG2814@2 NA|NA|NA EGP Major facilitator Superfamily HOOMBAJD_02617 543734.LCABL_25280 8.5e-115 419.9 Lactobacillaceae udp GO:0003674,GO:0003824,GO:0004850,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006213,GO:0006218,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009116,GO:0009119,GO:0009164,GO:0009987,GO:0016043,GO:0016740,GO:0016757,GO:0016763,GO:0019439,GO:0022607,GO:0030955,GO:0031420,GO:0033554,GO:0034214,GO:0034641,GO:0034655,GO:0034656,GO:0042454,GO:0042802,GO:0043167,GO:0043169,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046108,GO:0046131,GO:0046133,GO:0046135,GO:0046483,GO:0046700,GO:0046872,GO:0050896,GO:0051259,GO:0051716,GO:0055086,GO:0065003,GO:0071704,GO:0071840,GO:0072527,GO:0072529,GO:1901135,GO:1901136,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901657,GO:1901658 2.4.2.3,3.2.2.4 ko:K00757,ko:K01241 ko00230,ko00240,ko00983,ko01100,map00230,map00240,map00983,map01100 R00182,R01876,R02484,R08229 RC00063,RC00318 ko00000,ko00001,ko01000 iAPECO1_1312.APECO1_2630,iB21_1397.B21_03667,iECABU_c1320.ECABU_c43290,iECBD_1354.ECBD_4198,iECB_1328.ECB_03718,iECD_1391.ECD_03718,iECNA114_1301.ECNA114_4136,iECOK1_1307.ECOK1_4296,iECP_1309.ECP_4040,iECS88_1305.ECS88_4275,iECSF_1327.ECSF_3683,iEcSMS35_1347.EcSMS35_4208,iLF82_1304.LF82_2357,iNRG857_1313.NRG857_19105,iUMN146_1321.UM146_19385,iUMNK88_1353.UMNK88_4655 Bacteria 1TSEU@1239,3F5N6@33958,4HFDH@91061,COG2820@1,COG2820@2 NA|NA|NA F Phosphorylase superfamily HOOMBAJD_02618 543734.LCABL_25270 5.3e-180 637.1 Lactobacillaceae Bacteria 1TQM0@1239,3F3SE@33958,4HATA@91061,COG0477@1,COG2814@2 NA|NA|NA EGP Major facilitator Superfamily HOOMBAJD_02619 543734.LCABL_25260 3.1e-151 541.6 Lactobacillaceae 5.4.2.7 ko:K01839 ko00030,ko00230,map00030,map00230 R01057,R02749 RC00408 ko00000,ko00001,ko01000 Bacteria 1TP70@1239,3F3Y4@33958,4H9RU@91061,COG1015@1,COG1015@2 NA|NA|NA G Phosphotransfer between the C1 and C5 carbon atoms of pentose HOOMBAJD_02620 568703.LGG_02357 8.8e-09 65.9 Lactobacillaceae yhjA Bacteria 1VZVB@1239,3F8QH@33958,4HYP0@91061,COG3237@1,COG3237@2 NA|NA|NA S CsbD-like HOOMBAJD_02621 568703.LGG_02356 2.8e-194 684.5 Lactobacillaceae lctO ko:K10530 ko00000,ko01000 Bacteria 1TPC4@1239,3F3N3@33958,4HAU5@91061,COG1304@1,COG1304@2 NA|NA|NA C L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases HOOMBAJD_02622 568703.LGG_02355 7.2e-46 189.5 Lactobacillaceae Bacteria 1W32Y@1239,294CX@1,2ZRSX@2,3F85H@33958,4I1C7@91061 NA|NA|NA HOOMBAJD_02623 568703.LGG_02354 4e-201 707.2 Lactobacillaceae ltrA Bacteria 1VD7Y@1239,3F4QG@33958,4HMTW@91061,COG4292@1,COG4292@2 NA|NA|NA S Bacterial low temperature requirement A protein (LtrA) HOOMBAJD_02624 568703.LGG_02353 2.9e-122 444.5 Lactobacillaceae gpmA GO:0003674,GO:0003824,GO:0004619,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006109,GO:0006139,GO:0006140,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009894,GO:0009987,GO:0010675,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016866,GO:0016868,GO:0017144,GO:0018130,GO:0019219,GO:0019220,GO:0019222,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0031323,GO:0031329,GO:0032787,GO:0034248,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0043455,GO:0043456,GO:0043470,GO:0043471,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046538,GO:0046700,GO:0046939,GO:0050789,GO:0050794,GO:0051171,GO:0051174,GO:0051186,GO:0051188,GO:0051193,GO:0051196,GO:0055086,GO:0060255,GO:0062012,GO:0065007,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0080090,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1902031 5.4.2.11 ko:K01834 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230 M00001,M00002,M00003 R01518 RC00536 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Bacteria 1V2UT@1239,3F443@33958,4HGRK@91061,COG0588@1,COG0588@2 NA|NA|NA G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate HOOMBAJD_02625 568703.LGG_02352 1.5e-92 345.5 Lactobacillaceae ccpN GO:0006355,GO:0007154,GO:0007584,GO:0008150,GO:0009605,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0009991,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031667,GO:0031668,GO:0031669,GO:0031670,GO:0042221,GO:0045013,GO:0045892,GO:0045934,GO:0045990,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051716,GO:0060255,GO:0061984,GO:0061985,GO:0065007,GO:0070887,GO:0071496,GO:0080090,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 Bacteria 1TRZD@1239,3F6K8@33958,4HC4C@91061,COG0517@1,COG0517@2 NA|NA|NA K Domain in cystathionine beta-synthase and other proteins. HOOMBAJD_02626 568703.LGG_02351 0.0 1697.2 Lactobacillaceae ppdK 2.7.9.1 ko:K01006 ko00620,ko00710,ko00720,ko01100,ko01120,ko01200,map00620,map00710,map00720,map01100,map01120,map01200 M00169,M00171,M00172,M00173 R00206 RC00002,RC00015 ko00000,ko00001,ko00002,ko01000 Bacteria 1TPK8@1239,3FBUR@33958,4HBU2@91061,COG0574@1,COG0574@2,COG1080@1,COG1080@2 NA|NA|NA G Belongs to the PEP-utilizing enzyme family HOOMBAJD_02627 568703.LGG_02350 0.0 1330.5 Lactobacillaceae kup GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015318,GO:0015672,GO:0016020,GO:0022857,GO:0022890,GO:0030001,GO:0034220,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0098655,GO:0098660,GO:0098662 ko:K03549 ko00000,ko02000 2.A.72 Bacteria 1TRUQ@1239,3F4CU@33958,4HA8Z@91061,COG3158@1,COG3158@2 NA|NA|NA P Transport of potassium into the cell HOOMBAJD_02628 568703.LGG_02349 4.3e-166 590.5 Lactobacillaceae ko:K01990 M00254 ko00000,ko00002,ko02000 3.A.1 Bacteria 1TQA2@1239,3FC3T@33958,4HEU0@91061,COG1131@1,COG1131@2 NA|NA|NA V ATPases associated with a variety of cellular activities HOOMBAJD_02629 568703.LGG_02348 1.9e-209 734.9 Lactobacillaceae ko:K01992 M00254 ko00000,ko00002,ko02000 3.A.1 Bacteria 1UJ2G@1239,28MM7@1,2Z8B9@2,3FBU3@33958,4ISZP@91061 NA|NA|NA S ABC-2 family transporter protein HOOMBAJD_02630 568703.LGG_02347 3.6e-194 684.1 Lactobacillaceae Bacteria 1TP66@1239,28MJI@1,2Z8NZ@2,3F9EY@33958,4IF47@91061 NA|NA|NA HOOMBAJD_02631 568703.LGG_02346 3.8e-262 910.2 Lactobacillaceae pepC GO:0000096,GO:0000098,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006508,GO:0006520,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008234,GO:0009056,GO:0009063,GO:0009636,GO:0009987,GO:0016054,GO:0016787,GO:0019538,GO:0019752,GO:0042221,GO:0043170,GO:0043418,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044273,GO:0044281,GO:0044282,GO:0044424,GO:0044464,GO:0046395,GO:0050667,GO:0050896,GO:0070011,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 3.4.22.40 ko:K01372 ko00000,ko01000,ko01002 Bacteria 1TRJN@1239,3F49B@33958,4HBZ9@91061,COG3579@1,COG3579@2 NA|NA|NA E Peptidase C1-like family HOOMBAJD_02632 568703.LGG_02345 2.7e-257 894.0 Lactobacillaceae pepC GO:0000096,GO:0000098,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006508,GO:0006520,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008234,GO:0009056,GO:0009063,GO:0009636,GO:0009987,GO:0016054,GO:0016787,GO:0019538,GO:0019752,GO:0042221,GO:0043170,GO:0043418,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044273,GO:0044281,GO:0044282,GO:0044424,GO:0044464,GO:0046395,GO:0050667,GO:0050896,GO:0070011,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 3.4.22.40 ko:K01372 ko00000,ko01000,ko01002 Bacteria 1TRJN@1239,3F3QA@33958,4HBZ9@91061,COG3579@1,COG3579@2 NA|NA|NA E aminopeptidase HOOMBAJD_02633 568703.LGG_02343 4.2e-49 200.3 Lactobacillaceae HA62_12640 ko:K06975 ko00000 Bacteria 1VEEX@1239,3F80F@33958,4HNR2@91061,COG2388@1,COG2388@2 NA|NA|NA S GCN5-related N-acetyl-transferase HOOMBAJD_02634 568703.LGG_02341 1.9e-100 371.7 Lactobacillaceae dut GO:0000287,GO:0003674,GO:0003824,GO:0004170,GO:0005488,GO:0006139,GO:0006220,GO:0006221,GO:0006226,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009141,GO:0009143,GO:0009147,GO:0009149,GO:0009157,GO:0009162,GO:0009165,GO:0009166,GO:0009176,GO:0009177,GO:0009200,GO:0009204,GO:0009211,GO:0009213,GO:0009219,GO:0009221,GO:0009223,GO:0009262,GO:0009263,GO:0009264,GO:0009265,GO:0009394,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046078,GO:0046080,GO:0046081,GO:0046385,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0047429,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0072529,GO:0090407,GO:1901135,GO:1901136,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.6.1.23,4.1.1.36,6.3.2.5 ko:K01520,ko:K13038 ko00240,ko00770,ko00983,ko01100,map00240,map00770,map00983,map01100 M00053,M00120 R02100,R03269,R04231,R11896 RC00002,RC00064,RC00090,RC00822 ko00000,ko00001,ko00002,ko01000,ko03400 Bacteria 1V6HX@1239,3FB45@33958,4HIZ3@91061,COG0756@1,COG0756@2 NA|NA|NA F dUTPase HOOMBAJD_02635 568703.LGG_02340 8.5e-254 882.5 Lactobacillaceae radA ko:K04485 ko00000,ko03400 Bacteria 1TQ7Y@1239,3F3W8@33958,4H9YC@91061,COG1066@1,COG1066@2 NA|NA|NA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function HOOMBAJD_02636 568703.LGG_02339 1.8e-201 708.4 Lactobacillaceae yacL GO:0005575,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 Bacteria 1TP0P@1239,3F46T@33958,4H9NQ@91061,COG4956@1,COG4956@2 NA|NA|NA S domain protein HOOMBAJD_02637 543734.LCABL_25070 1.4e-108 399.4 Lactobacillaceae ko:K20374,ko:K21405 ko02024,map02024 ko00000,ko00001,ko03000 Bacteria 1U7HF@1239,3F9PR@33958,4IHE2@91061,COG1396@1,COG1396@2 NA|NA|NA K sequence-specific DNA binding HOOMBAJD_02638 543734.LCABL_25060 3.1e-95 355.1 Lactobacillaceae ko:K01990 M00254 ko00000,ko00002,ko02000 3.A.1 Bacteria 1TP4J@1239,3F3YW@33958,4HBGH@91061,COG1131@1,COG1131@2 NA|NA|NA V ABC transporter, ATP-binding protein HOOMBAJD_02639 543734.LCABL_25050 1.9e-69 269.2 Lactobacillaceae ko:K01992 M00254 ko00000,ko00002,ko02000 3.A.1 Bacteria 1V1GX@1239,3F52P@33958,4HG2P@91061,COG1277@1,COG1277@2 NA|NA|NA S ABC-2 family transporter protein HOOMBAJD_02640 568703.LGG_02337 4.4e-223 780.4 Lactobacillaceae inlJ Bacteria 1UWF2@1239,3F6D1@33958,4HGU0@91061,COG4932@1,COG4932@2 NA|NA|NA M MucBP domain HOOMBAJD_02641 568703.LGG_02336 2.9e-293 1013.8 Lactobacillaceae ko:K06148 ko00000,ko02000 3.A.1 Bacteria 1UYYQ@1239,3F5DU@33958,4HWP7@91061,COG1132@1,COG1132@2 NA|NA|NA V ABC transporter transmembrane region HOOMBAJD_02642 568703.LGG_02335 2.8e-61 241.1 Lactobacillaceae ko:K07979 ko00000,ko03000 Bacteria 1V743@1239,3F8MP@33958,4HJDB@91061,COG1725@1,COG1725@2 NA|NA|NA K helix_turn_helix gluconate operon transcriptional repressor HOOMBAJD_02643 568703.LGG_02334 1.8e-155 555.4 Lactobacillaceae Bacteria 1UY2R@1239,3F7N8@33958,4HEEQ@91061,COG4194@1,COG4194@2 NA|NA|NA S Membrane HOOMBAJD_02644 568703.LGG_02333 1e-140 506.1 Lactobacillaceae yhfC Bacteria 1V3UF@1239,3F7XI@33958,4HEYB@91061,COG4377@1,COG4377@2 NA|NA|NA S Putative membrane peptidase family (DUF2324) HOOMBAJD_02645 568703.LGG_02332 9.6e-259 899.0 Lactobacillaceae gltX GO:0001871,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009986,GO:0030246,GO:0030247,GO:0044424,GO:0044464,GO:2001065 6.1.1.17,6.1.1.24 ko:K01885,ko:K09698 ko00860,ko00970,ko01100,ko01110,ko01120,map00860,map00970,map01100,map01110,map01120 M00121,M00359,M00360 R03651,R05578 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko02048,ko03016 iSB619.SA_RS02860 Bacteria 1TPJC@1239,3F3PR@33958,4HAKH@91061,COG0008@1,COG0008@2 NA|NA|NA J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) HOOMBAJD_02647 568703.LGG_02330 8.6e-99 366.3 Lactobacillaceae Bacteria 1U7NE@1239,29Q7Y@1,30B6Z@2,3F9Y4@33958,4IHJP@91061 NA|NA|NA HOOMBAJD_02648 1423816.BACQ01000055_gene2124 3.3e-245 854.0 Lactobacillaceae loxD 1.1.3.15 ko:K00104 ko00630,ko01100,ko01110,ko01120,ko01130,map00630,map01100,map01110,map01120,map01130 R00475 RC00042 ko00000,ko00001,ko01000 Bacteria 1TPBC@1239,3F4AD@33958,4H9UU@91061,COG0277@1,COG0277@2 NA|NA|NA C FAD linked oxidases, C-terminal domain HOOMBAJD_02649 568703.LGG_02326 2.5e-272 944.1 Lactobacillaceae cysS GO:0000166,GO:0001871,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009986,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030246,GO:0030247,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:2001065 6.1.1.16,6.3.1.13 ko:K01883,ko:K15526 ko00970,map00970 M00359,M00360 R03650 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 iECUMN_1333.ECUMN_0566,iJN746.PP_2905 Bacteria 1TP9D@1239,3F4K7@33958,4HA6D@91061,COG0215@1,COG0215@2 NA|NA|NA J Belongs to the class-I aminoacyl-tRNA synthetase family HOOMBAJD_02650 568703.LGG_02325 2.1e-73 281.6 Lactobacillaceae mrnC GO:0003674,GO:0003824,GO:0004518,GO:0004540,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016787,GO:0016788,GO:0022613,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0140098,GO:1901360 ko:K11145 ko00000,ko01000,ko03009 Bacteria 1VA5V@1239,3F6HS@33958,4HIM3@91061,COG1939@1,COG1939@2 NA|NA|NA J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc) HOOMBAJD_02651 568703.LGG_02324 7e-144 516.5 Lactobacillaceae rlmB GO:0000154,GO:0000451,GO:0000453,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070039,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.185 ko:K03218,ko:K03437,ko:K12952 ko00000,ko01000,ko03009,ko03016 3.A.3.23 Bacteria 1TP9G@1239,3F3TD@33958,4HBBI@91061,COG0566@1,COG0566@2 NA|NA|NA J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family HOOMBAJD_02652 568703.LGG_02323 1.2e-97 362.5 Lactobacillaceae yacP ko:K06962 ko00000 Bacteria 1V9XR@1239,3F5KC@33958,4HFW4@91061,COG3688@1,COG3688@2 NA|NA|NA S YacP-like NYN domain HOOMBAJD_02653 568703.LGG_02322 6.1e-191 673.3 Lactobacillaceae XK27_00915 Bacteria 1TRBN@1239,3F4KZ@33958,4HBYT@91061,COG2141@1,COG2141@2 NA|NA|NA C Luciferase-like monooxygenase HOOMBAJD_02654 568703.LGG_02321 2.5e-121 441.4 Lactobacillaceae 1.5.1.40 ko:K06988 ko00000,ko01000 Bacteria 1UXZM@1239,3FB9A@33958,4HDRH@91061,COG2085@1,COG2085@2 NA|NA|NA S Rossmann-like domain HOOMBAJD_02655 568703.LGG_02320 2.4e-193 681.4 Lactobacillaceae ko:K01992 M00254 ko00000,ko00002,ko02000 3.A.1 Bacteria 1UZZX@1239,28MJI@1,2ZAW0@2,3F5KU@33958,4HCUA@91061 NA|NA|NA HOOMBAJD_02656 568703.LGG_02319 7.1e-215 753.1 Lactobacillaceae Bacteria 1TT1Z@1239,28MM7@1,2ZAX4@2,3F45B@33958,4HDYX@91061 NA|NA|NA HOOMBAJD_02657 568703.LGG_02318 2.7e-152 544.7 Lactobacillaceae ko:K01990 M00254 ko00000,ko00002,ko02000 3.A.1 Bacteria 1TQA2@1239,3FC3N@33958,4HEU0@91061,COG1131@1,COG1131@2 NA|NA|NA V ATPases associated with a variety of cellular activities HOOMBAJD_02658 568703.LGG_02316 2.6e-158 564.7 Lactobacillaceae Bacteria 1U79G@1239,2AGH5@1,316PQ@2,3F95I@33958,4IH4B@91061 NA|NA|NA HOOMBAJD_02659 568703.LGG_02315 4.6e-97 360.5 Lactobacillaceae Bacteria 1W25B@1239,2C156@1,31XDV@2,3FAM2@33958,4I11R@91061 NA|NA|NA HOOMBAJD_02660 568703.LGG_02313 2.6e-146 524.6 Lactobacillaceae Bacteria 1UZK9@1239,3F5JR@33958,4HG1F@91061,COG0639@1,COG0639@2 NA|NA|NA T Calcineurin-like phosphoesterase superfamily domain HOOMBAJD_02661 568703.LGG_02312 2.7e-80 304.7 Lactobacillaceae Bacteria 1U7J9@1239,2AVBI@1,31M2U@2,3F9T2@33958,4IHG6@91061 NA|NA|NA HOOMBAJD_02662 568703.LGG_02311 4.5e-180 637.1 Lactobacillaceae hepT 2.5.1.30,2.5.1.90 ko:K00805,ko:K02523 ko00900,ko01110,map00900,map01110 R09247,R09248 RC00279 ko00000,ko00001,ko01000,ko01006 Bacteria 1TR0U@1239,3F4GC@33958,4H9RH@91061,COG0142@1,COG0142@2 NA|NA|NA H Belongs to the FPP GGPP synthase family HOOMBAJD_02663 568703.LGG_02310 5.2e-99 367.1 Lactobacillaceae gerCA 2.5.1.30 ko:K00805 ko00900,ko01110,map00900,map01110 R09247 RC00279 ko00000,ko00001,ko01000,ko01006 Bacteria 1V1M0@1239,3F3R8@33958,4HG1H@91061,COG4769@1,COG4769@2 NA|NA|NA S Heptaprenyl diphosphate synthase component I HOOMBAJD_02664 568703.LGG_02309 1.7e-81 308.5 Lactobacillaceae ynhH Bacteria 1VCR8@1239,3F7R1@33958,4HMR5@91061,COG5341@1,COG5341@2 NA|NA|NA S NusG domain II HOOMBAJD_02665 568703.LGG_02308 0.0 1231.5 Lactobacillaceae ndh 1.6.99.3 ko:K03885 ko00190,map00190 ko00000,ko00001,ko01000 Bacteria 1TR6X@1239,3F4N1@33958,4HA14@91061,COG1252@1,COG1252@2 NA|NA|NA C NADH dehydrogenase HOOMBAJD_02666 568703.LGG_02307 4.6e-139 500.7 Lactobacillaceae cad ko:K20379 ko02024,map02024 ko00000,ko00001 Bacteria 1V2YY@1239,3FBKH@33958,4HGMF@91061,COG4939@1,COG4939@2 NA|NA|NA S FMN_bind HOOMBAJD_02667 568703.LGG_00010 9.3e-65 252.7 Lactobacillaceae ssb_2 ko:K03111 ko03030,ko03430,ko03440,map03030,map03430,map03440 ko00000,ko00001,ko03029,ko03032,ko03400 Bacteria 1W7D7@1239,3F9K0@33958,4I45R@91061,COG0629@1,COG0629@2 NA|NA|NA L Single-strand binding protein family HOOMBAJD_02668 568703.LGG_00011 2.7e-48 197.6 Lactobacillaceae rpsF GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0019843,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070181,GO:0097159,GO:1901363,GO:1990904 ko:K02990 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011,ko03029 Bacteria 1VA18@1239,3F6ZY@33958,4HKHD@91061,COG0360@1,COG0360@2 NA|NA|NA J Binds together with S18 to 16S ribosomal RNA HOOMBAJD_02669 568703.LGG_00012 7.3e-69 266.9 Lactobacillaceae ssb ko:K03111 ko03030,ko03430,ko03440,map03030,map03430,map03440 ko00000,ko00001,ko03029,ko03032,ko03400 Bacteria 1V3WT@1239,3F66N@33958,4HH8I@91061,COG0629@1,COG0629@2 NA|NA|NA L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism HOOMBAJD_02670 1423732.BALS01000057_gene2844 1.2e-35 155.2 Lactobacillaceae rpsR GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0019538,GO:0022626,GO:0022627,GO:0030312,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02963,ko:K03111,ko:K15125 ko03010,ko03030,ko03430,ko03440,ko05133,map03010,map03030,map03430,map03440,map05133 M00178 br01610,ko00000,ko00001,ko00002,ko00536,ko03011,ko03029,ko03032,ko03400 Bacteria 1V9XS@1239,3F7CY@33958,4HKCC@91061,COG0238@1,COG0238@2 NA|NA|NA J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit HOOMBAJD_02671 568703.LGG_00015 1.5e-91 342.0 Lactobacillaceae yhbO GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0006082,GO:0006089,GO:0006139,GO:0006259,GO:0006281,GO:0006464,GO:0006517,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006979,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009100,GO:0009266,GO:0009268,GO:0009314,GO:0009408,GO:0009411,GO:0009416,GO:0009438,GO:0009628,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0019172,GO:0019249,GO:0019538,GO:0019752,GO:0030091,GO:0032787,GO:0033554,GO:0034641,GO:0036211,GO:0036524,GO:0036525,GO:0042180,GO:0042182,GO:0042802,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046185,GO:0046394,GO:0046483,GO:0050896,GO:0051596,GO:0051716,GO:0061727,GO:0071704,GO:0072330,GO:0090304,GO:0140096,GO:1901135,GO:1901360,GO:1901564,GO:1901575,GO:1901576,GO:1901615,GO:1901617 3.5.1.124 ko:K05520 ko00000,ko01000,ko01002 Bacteria 1V3I7@1239,3FC7V@33958,4HFNG@91061,COG0693@1,COG0693@2 NA|NA|NA S DJ-1/PfpI family HOOMBAJD_02672 568703.LGG_00016 9.8e-280 968.8 Lactobacillaceae cydA GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009060,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016491,GO:0016679,GO:0016682,GO:0019646,GO:0020037,GO:0022900,GO:0022904,GO:0031224,GO:0031226,GO:0032991,GO:0044237,GO:0044425,GO:0044459,GO:0044464,GO:0045333,GO:0046906,GO:0048037,GO:0055114,GO:0070069,GO:0071944,GO:0097159,GO:1901363 1.10.3.14 ko:K00425 ko00190,ko01100,ko02020,map00190,map01100,map02020 M00153 R11325 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.4.3 iPC815.YPO1117,iSBO_1134.SBO_2253,iSFxv_1172.SFxv_0621,iS_1188.S0577,iSbBS512_1146.SbBS512_E2337 Bacteria 1TRH4@1239,3F5E6@33958,4HA19@91061,COG1271@1,COG1271@2 NA|NA|NA C Cytochrome bd terminal oxidase subunit I HOOMBAJD_02673 568703.LGG_00017 1e-182 646.0 Lactobacillaceae cydB GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009060,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016491,GO:0016679,GO:0016682,GO:0019646,GO:0020037,GO:0022900,GO:0022904,GO:0031224,GO:0031226,GO:0032991,GO:0044237,GO:0044425,GO:0044459,GO:0044464,GO:0045333,GO:0046906,GO:0048037,GO:0055114,GO:0070069,GO:0071944,GO:0097159,GO:1901363 1.10.3.14 ko:K00426 ko00190,ko01100,ko02020,map00190,map01100,map02020 M00153 R11325 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.4.3 iECABU_c1320.ECABU_c10120,iLF82_1304.LF82_0101,iNRG857_1313.NRG857_04455,iPC815.YPO1118,ic_1306.c1120 Bacteria 1TRYV@1239,3F3ZH@33958,4H9KF@91061,COG1294@1,COG1294@2 NA|NA|NA C Cytochrome bd terminal oxidase subunit II HOOMBAJD_02674 568703.LGG_00018 2.1e-28 131.0 Lactobacillaceae Bacteria 1U6T8@1239,2B5YU@1,31YUW@2,3F8G7@33958,4IGM0@91061 NA|NA|NA HOOMBAJD_02675 568703.LGG_00021 9.2e-108 396.4 Lactobacillaceae ko:K07052 ko00000 Bacteria 1VFRX@1239,3F4Q0@33958,4HRQQ@91061,COG1266@1,COG1266@2 NA|NA|NA S CAAX protease self-immunity HOOMBAJD_02676 568703.LGG_00025 6e-84 317.4 Firmicutes ko:K01992 M00254 ko00000,ko00002,ko02000 3.A.1 Bacteria 1VAB2@1239,COG0842@1,COG0842@2 NA|NA|NA V Best Blastp hit gi 7514214 pir G75157 'abc transporter, ATP-binding protein, puta tive PAB2069 - Pyrococcus abyssi (strain Orsay)' gi 5457852 emb CAB49342.1 '(AJ248284) ABC transporter, ATP-binding protein, puta tive Pyrococcus abyssi ', score 77, E-value 3.00E-13 HOOMBAJD_02677 568703.LGG_00028 1.1e-161 575.9 Lactobacillaceae ko:K01990 M00254 ko00000,ko00002,ko02000 3.A.1 Bacteria 1UHTY@1239,3FBTX@33958,4ISIK@91061,COG1131@1,COG1131@2 NA|NA|NA V ABC transporter HOOMBAJD_02678 568703.LGG_00029 4.5e-189 667.2 Lactobacillaceae amtB ko:K03320 ko00000,ko02000 1.A.11 Bacteria 1TQYG@1239,3F779@33958,4HBGK@91061,COG0004@1,COG0004@2 NA|NA|NA P Ammonium Transporter Family HOOMBAJD_02679 568703.LGG_00030 8.6e-212 742.7 Lactobacillaceae Bacteria 1TS9X@1239,3F60T@33958,4HC9P@91061,COG2072@1,COG2072@2 NA|NA|NA P Pyridine nucleotide-disulphide oxidoreductase HOOMBAJD_02680 568703.LGG_00031 4e-125 454.9 Lactobacillaceae usp 3.5.1.28 ko:K21471,ko:K22409 ko00000,ko01000,ko01002,ko01011 CBM50 Bacteria 1VCXB@1239,3F4ZY@33958,4HMCB@91061,COG3942@1,COG3942@2,COG4942@1,COG4942@2 NA|NA|NA D CHAP domain HOOMBAJD_02681 568703.LGG_00032 0.0 1500.3 Lactobacillaceae ylbB ko:K02004 M00258 ko00000,ko00002,ko02000 3.A.1 Bacteria 1TPHU@1239,3F4HF@33958,4HA2C@91061,COG0577@1,COG0577@2 NA|NA|NA V ABC transporter permease HOOMBAJD_02682 568703.LGG_00033 6.3e-128 463.4 Lactobacillaceae macB ko:K02003,ko:K02004 M00258 ko00000,ko00002,ko02000 3.A.1 Bacteria 1TQC9@1239,3F3YU@33958,4HB8D@91061,COG1136@1,COG1136@2 NA|NA|NA V ABC transporter, ATP-binding protein HOOMBAJD_02683 568703.LGG_00034 3e-96 357.8 Lactobacillaceae Bacteria 1VI1M@1239,3F530@33958,4HPZV@91061,COG1309@1,COG1309@2 NA|NA|NA K transcriptional regulator HOOMBAJD_02684 568703.LGG_00035 6.6e-153 546.6 Lactobacillaceae supH Bacteria 1UYU8@1239,3F3ZW@33958,4HE0K@91061,COG0561@1,COG0561@2 NA|NA|NA G Sucrose-6F-phosphate phosphohydrolase HOOMBAJD_02685 568703.LGG_00036 1.4e-45 188.7 Lactobacillaceae Bacteria 1U6YE@1239,29PRI@1,30APR@2,3F8Q9@33958,4IGSK@91061 NA|NA|NA HOOMBAJD_02686 568703.LGG_00037 4.1e-128 464.2 Lactobacillaceae ko:K07090 ko00000 Bacteria 1VR9G@1239,3F3TR@33958,4HV4W@91061,COG0730@1,COG0730@2 NA|NA|NA S membrane transporter protein HOOMBAJD_02687 568703.LGG_00038 2.1e-103 381.7 Lactobacillaceae Bacteria 1V803@1239,3F6KM@33958,4IRHS@91061,COG3548@1,COG3548@2 NA|NA|NA S Protein of unknown function (DUF1211) HOOMBAJD_02688 568703.LGG_00039 5e-113 413.7 Lactobacillaceae lacA 2.3.1.18,2.3.1.79 ko:K00633,ko:K00661 ko00000,ko01000 Bacteria 1TQQB@1239,3FC9A@33958,4HG1G@91061,COG0110@1,COG0110@2 NA|NA|NA S Maltose acetyltransferase HOOMBAJD_02689 568703.LGG_00040 8.5e-54 216.1 Lactobacillaceae Bacteria 1U7Q9@1239,29Q91@1,30B85@2,3FA0E@33958,4IHMK@91061 NA|NA|NA HOOMBAJD_02691 568703.LGG_00041 1.5e-285 988.0 Lactobacillaceae pipD ko:K08659 ko00000,ko01000,ko01002 Bacteria 1TQ0F@1239,3F3M4@33958,4HC3G@91061,COG4690@1,COG4690@2 NA|NA|NA E Dipeptidase HOOMBAJD_02692 568703.LGG_00042 6.1e-106 390.2 Lactobacillaceae Bacteria 1VQW3@1239,3F64W@33958,4HV4F@91061,COG2364@1,COG2364@2 NA|NA|NA S Membrane HOOMBAJD_02693 568703.LGG_00043 2.1e-86 325.1 Lactobacillaceae Bacteria 1U7QD@1239,29Q95@1,30B89@2,3FA0J@33958,4IHMQ@91061 NA|NA|NA HOOMBAJD_02694 543734.LCABL_00440 5.9e-53 213.8 Lactobacillaceae Bacteria 1U7S8@1239,2BM2D@1,32FJC@2,3FA3P@33958,4IHPK@91061 NA|NA|NA HOOMBAJD_02696 1423816.BACQ01000031_gene1142 6.1e-244 850.5 Lactobacillaceae ybfG Bacteria 1TPV1@1239,3F5J4@33958,4HCRA@91061,COG3409@1,COG3409@2 NA|NA|NA M peptidoglycan-binding domain-containing protein HOOMBAJD_02697 568703.LGG_00048 2e-121 441.8 Lactobacillaceae azlC Bacteria 1U49T@1239,3F45S@33958,4HDIJ@91061,COG1296@1,COG1296@2 NA|NA|NA E branched-chain amino acid HOOMBAJD_02698 568703.LGG_00049 1.5e-50 205.3 Lactobacillaceae azlD Bacteria 1VH9Q@1239,3F7IU@33958,4HNDZ@91061,COG4392@1,COG4392@2 NA|NA|NA S Branched-chain amino acid transport protein (AzlD) HOOMBAJD_02699 568703.LGG_00050 0.0 1239.9 Lactobacillaceae uidA 3.2.1.31 ko:K01195 ko00040,ko00531,ko00860,ko00944,ko00983,ko01100,ko01110,ko04142,map00040,map00531,map00860,map00944,map00983,map01100,map01110,map04142 M00014,M00076,M00077,M00078,M00129 R01478,R04979,R07818,R08127,R08260,R10830 RC00055,RC00171,RC00529,RC00530,RC00714,RC01251 ko00000,ko00001,ko00002,ko01000 Bacteria 1TPDC@1239,3F4FZ@33958,4HCXR@91061,COG3250@1,COG3250@2 NA|NA|NA G Belongs to the glycosyl hydrolase 2 family HOOMBAJD_02700 568703.LGG_00051 0.0 2591.6 Lactobacillaceae Bacteria 1UY9C@1239,3FBGD@33958,4IQ7Q@91061,COG1409@1,COG1409@2,COG5520@1,COG5520@2 NA|NA|NA M Glycosyl hydrolase family 59 HOOMBAJD_02702 568703.LGG_00052 1.4e-116 425.6 Lactobacillaceae eda 4.1.2.14,4.1.3.42 ko:K01625 ko00030,ko00630,ko01100,ko01120,ko01200,map00030,map00630,map01100,map01120,map01200 M00008,M00061,M00308,M00631 R00470,R05605 RC00307,RC00308,RC00435 ko00000,ko00001,ko00002,ko01000 Bacteria 1TS0F@1239,3F6AY@33958,4HG4G@91061,COG0800@1,COG0800@2 NA|NA|NA G KDPG and KHG aldolase HOOMBAJD_02703 568703.LGG_00053 1.3e-179 635.6 Lactobacillaceae kdgK 2.7.1.45 ko:K00874 ko00030,ko01100,ko01120,ko01200,map00030,map01100,map01120,map01200 M00061,M00308,M00631 R01541 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 Bacteria 1TRRY@1239,3F4FT@33958,4HBH6@91061,COG0524@1,COG0524@2 NA|NA|NA G pfkB family carbohydrate kinase HOOMBAJD_02704 1423816.BACQ01000031_gene1184 1.2e-279 968.4 Lactobacillaceae uxaC 5.3.1.12 ko:K01812 ko00040,ko01100,map00040,map01100 M00061,M00631 R01482,R01983 RC00376 ko00000,ko00001,ko00002,ko01000 Bacteria 1TRI0@1239,3F4QN@33958,4HCGI@91061,COG1904@1,COG1904@2 NA|NA|NA G glucuronate isomerase HOOMBAJD_02705 568703.LGG_00056 1.7e-217 761.5 Lactobacillaceae uxuA 4.2.1.8 ko:K01686 ko00040,ko01100,map00040,map01100 M00061 R05606 RC00543 ko00000,ko00001,ko00002,ko01000 Bacteria 1TP5F@1239,3F4UF@33958,4H9UR@91061,COG1312@1,COG1312@2 NA|NA|NA G Catalyzes the dehydration of D-mannonate HOOMBAJD_02706 568703.LGG_00057 0.0 1110.1 Lactobacillaceae mtlD 1.1.1.17,1.1.1.57 ko:K00009,ko:K00040 ko00040,ko00051,ko01100,map00040,map00051,map01100 M00061 R02454,R02703 RC00085 ko00000,ko00001,ko00002,ko01000 Bacteria 1TQ97@1239,3F3XU@33958,4HBQ9@91061,COG0246@1,COG0246@2 NA|NA|NA G Mannitol dehydrogenase C-terminal domain HOOMBAJD_02707 568703.LGG_00058 6.2e-230 803.1 Lactobacillaceae Bacteria 1V3NJ@1239,3F4KD@33958,4HTUC@91061,COG2211@1,COG2211@2 NA|NA|NA G Major Facilitator HOOMBAJD_02708 568703.LGG_00059 9e-127 459.5 Lactobacillaceae kdgR Bacteria 1V3SB@1239,3F69H@33958,4HGG8@91061,COG1802@1,COG1802@2 NA|NA|NA K FCD domain HOOMBAJD_02709 568703.LGG_00060 2.7e-192 677.9 Lactobacillaceae kdgK 2.7.1.45 ko:K00874 ko00030,ko01100,ko01120,ko01200,map00030,map01100,map01120,map01200 M00061,M00308,M00631 R01541 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 Bacteria 1TRRY@1239,3FC26@33958,4HT5E@91061,COG0524@1,COG0524@2 NA|NA|NA G pfkB family carbohydrate kinase HOOMBAJD_02710 568703.LGG_00061 0.0 1712.6 Lactobacillaceae Bacteria 1UKTQ@1239,3F5BP@33958,4HEXZ@91061,COG5520@1,COG5520@2 NA|NA|NA M Glycosyl hydrolase family 59 HOOMBAJD_02711 568703.LGG_00062 2.3e-59 234.6 Lactobacillaceae Bacteria 1VFF0@1239,2E9Y3@1,3343R@2,3F8BC@33958,4HPUY@91061 NA|NA|NA HOOMBAJD_02712 568703.LGG_00063 2.7e-65 254.6 Lactobacillaceae GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 ko:K07006 ko00000 Bacteria 1VGE7@1239,3F6YB@33958,4HNE7@91061,COG3576@1,COG3576@2 NA|NA|NA S pyridoxamine 5-phosphate HOOMBAJD_02713 568703.LGG_00064 3.5e-247 860.5 Lactobacillaceae ko:K18926 M00715 ko00000,ko00002,ko02000 2.A.1.3.30 Bacteria 1UYQB@1239,3F3NG@33958,4HE3Y@91061,COG0477@1,COG2814@2 NA|NA|NA EGP Major facilitator Superfamily HOOMBAJD_02714 568703.LGG_00065 9e-220 769.2 Bacilli 3.1.1.83 ko:K14731 ko00903,ko00930,ko01220,map00903,map00930,map01220 R03751,R06390,R06391,R06392,R06393 RC00713,RC00983,RC01505 ko00000,ko00001,ko01000 Bacteria 1UZ7B@1239,4HI9S@91061,COG0657@1,COG0657@2 NA|NA|NA I Alpha beta hydrolase HOOMBAJD_02715 568703.LGG_00066 2.4e-119 434.9 Lactobacillaceae Bacteria 1VFZP@1239,3F872@33958,4HYAN@91061,COG1309@1,COG1309@2 NA|NA|NA K Bacterial regulatory proteins, tetR family HOOMBAJD_02717 568703.LGG_00068 0.0 1428.7 Lactobacillaceae ydgH GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006790,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009605,GO:0009607,GO:0009987,GO:0030312,GO:0043207,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044272,GO:0044281,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0046505,GO:0046506,GO:0050896,GO:0051701,GO:0051704,GO:0051707,GO:0052173,GO:0052200,GO:0052564,GO:0052572,GO:0071704,GO:0071944,GO:0075136,GO:1901576 ko:K06994,ko:K07003 ko00000 Bacteria 1TQ7C@1239,3FCCY@33958,4HBM6@91061,COG1511@1,COG1511@2,COG2409@1,COG2409@2 NA|NA|NA S MMPL family HOOMBAJD_02718 568703.LGG_00069 1.3e-105 389.0 Lactobacillaceae ko:K22106 ko00000,ko03000 Bacteria 1V95E@1239,3F6ZH@33958,4HH9M@91061,COG1309@1,COG1309@2 NA|NA|NA K Tetracycline repressor, C-terminal all-alpha domain HOOMBAJD_02719 1423816.BACQ01000031_gene1168 9.7e-122 443.0 Lactobacillaceae ko:K07090 ko00000 Bacteria 1VPY2@1239,3F7BY@33958,4IQZ2@91061,COG0730@1,COG0730@2 NA|NA|NA S Sulfite exporter TauE/SafE HOOMBAJD_02720 568703.LGG_00071 1.3e-248 865.1 Lactobacillaceae 3.5.4.28,3.5.4.31 ko:K12960 ko00270,ko01100,map00270,map01100 R09660 RC00477 ko00000,ko00001,ko01000 Bacteria 1TP43@1239,3F4YC@33958,4HBV3@91061,COG0402@1,COG0402@2 NA|NA|NA F Amidohydrolase family HOOMBAJD_02721 568703.LGG_00072 1.9e-69 268.5 Lactobacillaceae Bacteria 1V79N@1239,2B1UF@1,31UAF@2,3F79B@33958,4IF71@91061 NA|NA|NA S An automated process has identified a potential problem with this gene model HOOMBAJD_02722 568703.LGG_00073 2.1e-149 535.0 Lactobacillaceae Bacteria 1TSE4@1239,2Z7NA@2,3F5Z4@33958,4HE46@91061,arCOG09719@1 NA|NA|NA S Protein of unknown function (DUF3100) HOOMBAJD_02724 568703.LGG_00075 1.9e-110 405.2 Lactobacillaceae opuCD GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0015695,GO:0015696,GO:0015697,GO:0015838,GO:0016020,GO:0031460,GO:0044464,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944,GO:0072337 ko:K05846 ko02010,map02010 M00209 ko00000,ko00001,ko00002,ko02000 3.A.1.12 iYO844.BSU33800 Bacteria 1TQ5C@1239,3F51B@33958,4HAVM@91061,COG1174@1,COG1174@2 NA|NA|NA P Binding-protein-dependent transport system inner membrane component HOOMBAJD_02725 568703.LGG_00076 5.4e-175 620.2 Lactobacillaceae opuCC GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0015695,GO:0015696,GO:0015697,GO:0015838,GO:0016020,GO:0031460,GO:0044464,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944,GO:0072337 ko:K05845,ko:K05846 ko02010,map02010 M00209 ko00000,ko00001,ko00002,ko02000 3.A.1.12 iSB619.SA_RS12835 Bacteria 1TQ7D@1239,3F420@33958,4HARV@91061,COG1732@1,COG1732@2 NA|NA|NA M Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) HOOMBAJD_02726 568703.LGG_00077 4.7e-106 390.6 Lactobacillaceae opuCB GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008150,GO:0016020,GO:0044464,GO:0051179,GO:0051234,GO:0071705,GO:0071944 ko:K05845,ko:K05846 ko02010,map02010 M00209 ko00000,ko00001,ko00002,ko02000 3.A.1.12 iYO844.BSU33720 Bacteria 1TSX8@1239,3F4EM@33958,4HC1D@91061,COG1174@1,COG1174@2 NA|NA|NA E ABC transporter permease HOOMBAJD_02727 568703.LGG_00078 1.2e-214 752.3 Lactobacillaceae opuCA ko:K05847 ko02010,map02010 M00209 ko00000,ko00001,ko00002,ko02000 3.A.1.12 iSB619.SA_RS12845,iYO844.BSU33730 Bacteria 1TPV8@1239,3F55H@33958,4H9SI@91061,COG1125@1,COG1125@2 NA|NA|NA E ABC transporter, ATP-binding protein HOOMBAJD_02728 568703.LGG_00079 4.5e-52 210.3 Lactobacillaceae Bacteria 1U38N@1239,2EJFD@1,33D6D@2,3F8AW@33958,4HRYN@91061 NA|NA|NA S Protein of unknown function (DUF2568) HOOMBAJD_02729 568703.LGG_00080 1e-69 269.2 Lactobacillaceae ko:K08365 ko00000,ko03000 Bacteria 1VKCY@1239,3F88Z@33958,4HSCZ@91061,COG0789@1,COG0789@2 NA|NA|NA K helix_turn_helix, mercury resistance HOOMBAJD_02731 568703.LGG_00082 0.0 1139.0 Lactobacillaceae 3.6.3.3,3.6.3.5 ko:K01534 ko00000,ko01000 3.A.3.6 Bacteria 1TQ07@1239,3F4T3@33958,4H9SP@91061,COG2217@1,COG2217@2 NA|NA|NA P P-type ATPase HOOMBAJD_02732 543734.LCABL_00680 1.6e-32 144.8 Lactobacillaceae copZ ko:K07213 ko04978,map04978 ko00000,ko00001 Bacteria 1VFJ8@1239,3F830@33958,4HNY2@91061,COG2608@1,COG2608@2 NA|NA|NA P Heavy-metal-associated domain HOOMBAJD_02733 568703.LGG_00084 4.9e-102 377.1 Lactobacillaceae dps ko:K04047 ko00000,ko03036 Bacteria 1VB1X@1239,3F4SN@33958,4HMJG@91061,COG0783@1,COG0783@2 NA|NA|NA P Belongs to the Dps family HOOMBAJD_02734 568703.LGG_00085 1.6e-117 428.7 Lactobacillaceae rcfA 4.1.99.16,4.2.3.22,4.2.3.75 ko:K10187,ko:K21562 ko00909,ko01100,ko01110,map00909,map01100,map01110 R07647,R07648,R08543,R09487 RC01832,RC02159,RC02160,RC02183,RC02425,RC02552 ko00000,ko00001,ko01000,ko03000 Bacteria 1UZT0@1239,3FBKF@33958,4HFR2@91061,COG0664@1,COG0664@2 NA|NA|NA K helix_turn_helix, cAMP Regulatory protein HOOMBAJD_02735 568703.LGG_00086 4.1e-98 364.0 Bacilli Bacteria 1VWWS@1239,4HXRN@91061,COG1309@1,COG1309@2 NA|NA|NA K Bacterial regulatory proteins, tetR family HOOMBAJD_02736 568703.LGG_00087 1.5e-89 335.5 Lactobacillaceae Bacteria 1VDHA@1239,2BS9S@1,32MBE@2,3FB2D@33958,4I3CT@91061 NA|NA|NA S Protein of unknown function with HXXEE motif HOOMBAJD_02738 568703.LGG_00089 9.3e-161 572.8 Lactobacillaceae ko:K07052 ko00000 Bacteria 1VA8S@1239,3F5HF@33958,4HPR4@91061,COG1266@1,COG1266@2 NA|NA|NA S CAAX protease self-immunity HOOMBAJD_02739 1158607.UAU_01227 2.2e-250 871.3 Enterococcaceae manY 2.7.1.191,2.7.1.202 ko:K02768,ko:K02769,ko:K02770,ko:K02794,ko:K02795 ko00051,ko00520,ko01100,ko01120,ko02060,map00051,map00520,map01100,map01120,map02060 M00273,M00276 R02630,R03232 RC00017,RC03206 ko00000,ko00001,ko00002,ko01000,ko02000 4.A.2.1,4.A.6.1 Bacteria 1TPKU@1239,4B1M1@81852,4H9KR@91061,COG1299@1,COG1299@2,COG1445@1,COG1445@2 NA|NA|NA G PTS system, Lactose/Cellobiose specific IIB subunit HOOMBAJD_02740 568703.LGG_00092 8.5e-81 306.2 Lactobacillaceae frvA 2.7.1.194,2.7.1.200,2.7.1.202 ko:K02768,ko:K02769,ko:K02770,ko:K02773,ko:K02806,ko:K02821,ko:K03491 ko00051,ko00052,ko00053,ko01100,ko01120,ko02060,map00051,map00052,map00053,map01100,map01120,map02060 M00273,M00279,M00283,M00550 R03232,R05570,R07671 RC00017,RC03206 ko00000,ko00001,ko00002,ko01000,ko02000,ko03000 4.A.2.1,4.A.5.1,4.A.7.1 Bacteria 1V7JV@1239,3F73T@33958,4HJ0E@91061,COG1762@1,COG1762@2 NA|NA|NA G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 HOOMBAJD_02741 568703.LGG_00093 0.0 1769.6 Lactobacillaceae mngB 3.2.1.170 ko:K15524 ko00000,ko01000 GH38 Bacteria 1TQEH@1239,3F4XS@33958,4HBC7@91061,COG0383@1,COG0383@2 NA|NA|NA G Glycosyl hydrolases family 38 N-terminal domain HOOMBAJD_02742 568703.LGG_00094 7.4e-141 506.5 Lactobacillaceae Bacteria 1TR5E@1239,3F6SV@33958,4HIBB@91061,COG1737@1,COG1737@2 NA|NA|NA K SIS domain HOOMBAJD_02743 568703.LGG_00095 7.7e-279 965.7 Lactobacillaceae bgl 3.2.1.86 ko:K01223 ko00010,ko00500,map00010,map00500 R00839,R05133,R05134 RC00049,RC00171,RC00714 ko00000,ko00001,ko01000 GT1 Bacteria 1TP19@1239,3FC7B@33958,4H9KU@91061,COG2723@1,COG2723@2 NA|NA|NA G Belongs to the glycosyl hydrolase 1 family HOOMBAJD_02744 568703.LGG_00096 5.8e-163 580.1 Lactobacillaceae bglK_1 2.7.1.2 ko:K00845 ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200 M00001,M00549 R00299,R01600,R01786 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 Bacteria 1UZ80@1239,3F5ZR@33958,4HD5J@91061,COG1940@1,COG1940@2 NA|NA|NA GK ROK family HOOMBAJD_02746 568703.LGG_00098 5.6e-144 516.9 Lactobacillaceae trpA 4.2.1.20 ko:K01695 ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230 M00023 R00674,R02340,R02722 RC00209,RC00210,RC00700,RC00701,RC02868 ko00000,ko00001,ko00002,ko01000 Bacteria 1TPXA@1239,3F50S@33958,4HFQ8@91061,COG0159@1,COG0159@2 NA|NA|NA E The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate HOOMBAJD_02747 568703.LGG_00099 1.7e-229 801.6 Lactobacillaceae trpB 4.2.1.20 ko:K01696 ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230 M00023 R00674,R02340,R02722 RC00209,RC00210,RC00700,RC00701,RC02868 ko00000,ko00001,ko00002,ko01000 Bacteria 1TPI3@1239,3F4DT@33958,4H9WC@91061,COG0133@1,COG0133@2 NA|NA|NA E The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine HOOMBAJD_02748 568703.LGG_00100 9e-107 392.9 Lactobacillaceae trpF GO:0000162,GO:0003674,GO:0003824,GO:0004425,GO:0004640,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016829,GO:0016830,GO:0016831,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.1.1.48,4.2.1.160,4.2.1.20,5.3.1.24 ko:K01696,ko:K01817,ko:K13498,ko:K22100 ko00260,ko00400,ko00790,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map00790,map01100,map01110,map01130,map01230 M00023,M00840 R00674,R02340,R02722,R03508,R03509,R11072 RC00209,RC00210,RC00700,RC00701,RC00944,RC00945,RC02868,RC03343 ko00000,ko00001,ko00002,ko01000 iJN678.trpF,iPC815.YPO2205,iSBO_1134.SBO_1804,iSDY_1059.SDY_1330 Bacteria 1V6Y0@1239,3F4B6@33958,4HN68@91061,COG0135@1,COG0135@2 NA|NA|NA E Belongs to the TrpF family HOOMBAJD_02749 568703.LGG_00101 2.2e-137 495.0 Lactobacillaceae trpC GO:0003674,GO:0003824,GO:0004425,GO:0016829,GO:0016830,GO:0016831 4.1.1.48,5.3.1.24 ko:K01609,ko:K01817,ko:K13498 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00023 R03508,R03509 RC00944,RC00945 ko00000,ko00001,ko00002,ko01000 Bacteria 1TR94@1239,3F5AK@33958,4HDZQ@91061,COG0134@1,COG0134@2 NA|NA|NA E Belongs to the TrpC family HOOMBAJD_02750 568703.LGG_00102 4.1e-184 650.6 Lactobacillaceae trpD GO:0000162,GO:0003674,GO:0003824,GO:0004048,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005950,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0032991,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494 2.4.2.18,4.1.3.27 ko:K00766,ko:K13497 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00023 R00985,R00986,R01073 RC00010,RC00440,RC02148,RC02414 ko00000,ko00001,ko00002,ko01000 Bacteria 1TP8U@1239,3F50X@33958,4H9KQ@91061,COG0547@1,COG0547@2 NA|NA|NA F Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) HOOMBAJD_02751 568703.LGG_00104 0.0 1078.2 Lactobacillaceae norB GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944 ko:K08170 M00702 ko00000,ko00002,ko01504,ko02000 2.A.1.3.23,2.A.1.3.59 Bacteria 1TPV3@1239,3F5DE@33958,4HCJN@91061,COG0477@1,COG0477@2,COG2211@1,COG2211@2 NA|NA|NA EGP Major Facilitator HOOMBAJD_02752 568703.LGG_00105 5.5e-112 410.2 Lactobacillaceae Bacteria 1V9ST@1239,3F5J7@33958,4HP6S@91061,COG1309@1,COG1309@2 NA|NA|NA K Bacterial regulatory proteins, tetR family HOOMBAJD_02753 568703.LGG_00106 6.2e-123 446.8 Lactobacillaceae Bacteria 1U7J0@1239,2BJ44@1,32DD4@2,3F9SG@33958,4IHFT@91061 NA|NA|NA HOOMBAJD_02755 568703.LGG_00107 6.8e-107 393.3 Firmicutes 1.1.1.133,5.1.3.13 ko:K00067,ko:K01790 ko00521,ko00523,ko01130,map00521,map00523,map01130 M00793 R02777,R06514 RC00182,RC01531 ko00000,ko00001,ko00002,ko01000 Bacteria 1VRRN@1239,COG1898@1,COG1898@2 NA|NA|NA M dTDP-4-dehydrorhamnose 3,5-epimerase HOOMBAJD_02756 568703.LGG_00108 1e-139 502.7 Lactobacillaceae dapB GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008839,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016020,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0019752,GO:0019877,GO:0030312,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0048037,GO:0050661,GO:0050662,GO:0051287,GO:0055114,GO:0070402,GO:0070404,GO:0071704,GO:0071944,GO:0097159,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.17.1.8 ko:K00215 ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230 M00016,M00525,M00526,M00527 R04198,R04199 RC00478 ko00000,ko00001,ko00002,ko01000 iJN678.dapB,iNJ661.Rv2773c,iYO844.BSU22490 Bacteria 1TR9D@1239,3F3MA@33958,4HA5X@91061,COG0289@1,COG0289@2 NA|NA|NA E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate HOOMBAJD_02757 568703.LGG_00109 1.8e-167 595.1 Lactobacillaceae dapA 4.3.3.7 ko:K01714 ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230 M00016,M00525,M00526,M00527 R10147 RC03062,RC03063 ko00000,ko00001,ko00002,ko01000 Bacteria 1TPCK@1239,3F4UH@33958,4H9K9@91061,COG0329@1,COG0329@2 NA|NA|NA E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) HOOMBAJD_02758 568703.LGG_00110 4.6e-224 783.5 Lactobacillaceae hipO GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016787,GO:0016810,GO:0016811,GO:0019213,GO:0019752,GO:0019877,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046451,GO:0050118,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 3.5.1.47 ko:K05823,ko:K12941,ko:K21613 ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230 M00525 R02733 RC00064,RC00300 ko00000,ko00001,ko00002,ko01000,ko01002 Bacteria 1TPD7@1239,3F419@33958,4H9SG@91061,COG1473@1,COG1473@2 NA|NA|NA E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate HOOMBAJD_02759 568703.LGG_00111 2e-73 282.3 Lactobacillaceae dapD GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008666,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009987,GO:0016053,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0016748,GO:0016749,GO:0019752,GO:0019877,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.117,2.3.1.89 ko:K00674,ko:K05822 ko00300,ko01100,ko01110,ko01120,ko01230,map00300,map01100,map01110,map01120,map01230 M00016,M00525 R04364,R04365 RC00004,RC01136 ko00000,ko00001,ko00002,ko01000 iSbBS512_1146.SbBS512_E0158,iYO844.BSU14180 Bacteria 1TQUJ@1239,3F3U0@33958,4H9KY@91061,COG2171@1,COG2171@2 NA|NA|NA E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate HOOMBAJD_02760 568703.LGG_00112 1.7e-259 901.4 Lactobacillaceae lysA 4.1.1.19,4.1.1.20 ko:K01585,ko:K01586 ko00300,ko00330,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map00330,map01100,map01110,map01120,map01130,map01230 M00016,M00133,M00525,M00526,M00527 R00451,R00566 RC00299 ko00000,ko00001,ko00002,ko01000 iHN637.CLJU_RS18870 Bacteria 1TPE9@1239,3F3VJ@33958,4H9XW@91061,COG0019@1,COG0019@2 NA|NA|NA E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine HOOMBAJD_02761 568703.LGG_00113 6.2e-260 902.9 Lactobacillaceae lysC GO:0000166,GO:0003674,GO:0003824,GO:0004072,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006553,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0017076,GO:0019202,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046451,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.4 ko:K00928 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 M00016,M00017,M00018,M00033,M00525,M00526,M00527 R00480 RC00002,RC00043 ko00000,ko00001,ko00002,ko01000 iYO844.BSU03790 Bacteria 1TPQJ@1239,3F48V@33958,4HAEP@91061,COG0527@1,COG0527@2 NA|NA|NA E Belongs to the aspartokinase family HOOMBAJD_02762 568703.LGG_00114 1.2e-188 665.6 Lactobacillaceae dapF GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008837,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016853,GO:0016854,GO:0016855,GO:0019752,GO:0036361,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0047661,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.1.1.7 ko:K01778 ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230 M00016,M00525,M00527 R02735 RC00302 ko00000,ko00001,ko00002,ko01000 Bacteria 1TPMN@1239,3F4F7@33958,4HBH4@91061,COG0253@1,COG0253@2 NA|NA|NA E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan HOOMBAJD_02763 568703.LGG_00115 6.7e-198 696.4 Lactobacillaceae asd 1.2.1.11 ko:K00133 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 M00016,M00017,M00018,M00033,M00525,M00526,M00527 R02291 RC00684 ko00000,ko00001,ko00002,ko01000 Bacteria 1TPC6@1239,3F4S9@33958,4HA9H@91061,COG0136@1,COG0136@2 NA|NA|NA E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate HOOMBAJD_02764 568703.LGG_00116 6.6e-63 246.5 Lactobacillaceae Bacteria 1U75Z@1239,29PM4@1,30AVT@2,3F90S@33958,4IH0M@91061 NA|NA|NA HOOMBAJD_02765 568703.LGG_00117 1.2e-49 202.2 Bacteria Bacteria COG1396@1,COG1396@2 NA|NA|NA K sequence-specific DNA binding HOOMBAJD_02766 568703.LGG_00118 1.4e-74 285.4 Lactobacillaceae 3.6.1.55 ko:K03574 ko00000,ko01000,ko03400 Bacteria 1VK3S@1239,3F9X5@33958,4IHJ0@91061,COG0494@1,COG0494@2 NA|NA|NA L NUDIX domain HOOMBAJD_02767 568703.LGG_00119 9.3e-153 546.2 Lactobacillaceae Bacteria 1V86F@1239,3F4CV@33958,4HJWZ@91061,COG0697@1,COG0697@2 NA|NA|NA EG EamA-like transporter family HOOMBAJD_02768 568703.LGG_00579 3.3e-80 305.4 Lactobacillaceae XK27_00720 ko:K13730 ko05100,map05100 ko00000,ko00001 Bacteria 1UVV2@1239,3F806@33958,4I2C5@91061,COG4886@1,COG4886@2 NA|NA|NA S Leucine-rich repeat (LRR) protein HOOMBAJD_02769 568703.LGG_00578 2.2e-44 184.9 Lactobacillaceae Bacteria 1U7ZW@1239,2AIBJ@1,318SM@2,3FAD9@33958,4IHXA@91061 NA|NA|NA HOOMBAJD_02770 568703.LGG_00577 1e-174 619.4 Lactobacillaceae Bacteria 1VCXS@1239,3F5HA@33958,4HKJG@91061,COG4072@1,COG4072@2 NA|NA|NA S Cell surface protein HOOMBAJD_02771 543734.LCABL_06680 2e-62 245.7 Firmicutes Bacteria 1UM02@1239,2DDU7@1,2ZJAU@2 NA|NA|NA S WxL domain surface cell wall-binding HOOMBAJD_02772 568703.LGG_00575 2.5e-253 880.9 Lactobacillaceae brnQ GO:0003333,GO:0003674,GO:0005215,GO:0005304,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0006855,GO:0006865,GO:0008150,GO:0008324,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015175,GO:0015179,GO:0015188,GO:0015190,GO:0015238,GO:0015318,GO:0015658,GO:0015711,GO:0015803,GO:0015804,GO:0015807,GO:0015818,GO:0015820,GO:0015829,GO:0015849,GO:0015893,GO:0016020,GO:0022857,GO:0034220,GO:0042221,GO:0042493,GO:0044464,GO:0046942,GO:0046943,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098655,GO:0098656,GO:1902475,GO:1903785,GO:1903825,GO:1905039 ko:K03311 ko00000 2.A.26 Bacteria 1TQIS@1239,3F3KC@33958,4HAKA@91061,COG1114@1,COG1114@2 NA|NA|NA U Component of the transport system for branched-chain amino acids HOOMBAJD_02773 568703.LGG_00574 6.5e-117 427.2 Lactobacillaceae Bacteria 1U7KY@1239,29Q72@1,30B62@2,3F9VZ@33958,4IHI1@91061 NA|NA|NA HOOMBAJD_02774 568703.LGG_00573 7.6e-121 439.9 Lactobacillaceae tcyB GO:0000099,GO:0000101,GO:0003333,GO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0006865,GO:0008150,GO:0008324,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015175,GO:0015179,GO:0015184,GO:0015318,GO:0015711,GO:0015804,GO:0015807,GO:0015811,GO:0015849,GO:0016020,GO:0022857,GO:0033229,GO:0034220,GO:0042883,GO:0044464,GO:0046942,GO:0046943,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0072337,GO:0072348,GO:0072349,GO:0098655,GO:0098656,GO:1901682,GO:1902475,GO:1903712,GO:1903825,GO:1905039 ko:K02424,ko:K10009 ko02010,map02010 M00234 ko00000,ko00001,ko00002,ko02000,ko02035 3.A.1.3.10,3.A.1.3.14 iYO844.BSU03600 Bacteria 1TPQ8@1239,3F4QR@33958,4H9N1@91061,COG0765@1,COG0765@2 NA|NA|NA E ABC transporter HOOMBAJD_02775 568703.LGG_00572 5.6e-144 516.9 Lactobacillaceae tcyA ko:K02424,ko:K10009,ko:K16957 ko02010,map02010 M00234,M00585 ko00000,ko00001,ko00002,ko02000,ko02035 3.A.1.3.10,3.A.1.3.13,3.A.1.3.14 Bacteria 1TR13@1239,3F4MH@33958,4HBRP@91061,COG0834@1,COG0834@2 NA|NA|NA ET Belongs to the bacterial solute-binding protein 3 family HOOMBAJD_02776 568703.LGG_00571 4.1e-209 733.8 Lactobacillaceae metC 4.4.1.8 ko:K01760 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 M00017 R00782,R01286,R02408,R04941 RC00056,RC00069,RC00382,RC00488,RC00710,RC01245,RC02303 ko00000,ko00001,ko00002,ko01000 Bacteria 1TPC7@1239,3F3Y2@33958,4HAFQ@91061,COG0626@1,COG0626@2 NA|NA|NA E cystathionine HOOMBAJD_02778 568703.LGG_00569 2.5e-141 508.1 Lactobacillaceae Bacteria 1V5SH@1239,2DMZ9@1,32UJF@2,3F68Q@33958,4HKAC@91061 NA|NA|NA HOOMBAJD_02780 568703.LGG_00568 5.9e-174 616.7 Lactobacillaceae cysK GO:0000096,GO:0000097,GO:0000098,GO:0003674,GO:0003824,GO:0004122,GO:0004124,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006555,GO:0006563,GO:0006790,GO:0006807,GO:0008134,GO:0008144,GO:0008150,GO:0008152,GO:0008284,GO:0008652,GO:0009056,GO:0009058,GO:0009063,GO:0009066,GO:0009068,GO:0009069,GO:0009070,GO:0009087,GO:0009987,GO:0016043,GO:0016053,GO:0016054,GO:0016740,GO:0016765,GO:0016829,GO:0016835,GO:0016836,GO:0016846,GO:0019344,GO:0019752,GO:0019842,GO:0022607,GO:0030170,GO:0032991,GO:0032993,GO:0036094,GO:0042127,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043388,GO:0043436,GO:0043933,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044272,GO:0044273,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046395,GO:0046983,GO:0048037,GO:0048518,GO:0048522,GO:0050662,GO:0050789,GO:0050794,GO:0051098,GO:0051099,GO:0051101,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0051291,GO:0065003,GO:0065007,GO:0065009,GO:0070279,GO:0071704,GO:0071840,GO:0080146,GO:0097159,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901607,GO:1904796,GO:1904798,GO:2000677,GO:2000679 2.5.1.47 ko:K01738 ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230 M00021 R00897,R03601,R04859 RC00020,RC02814,RC02821 ko00000,ko00001,ko00002,ko01000 Bacteria 1TP30@1239,3F4VD@33958,4HAMU@91061,COG0031@1,COG0031@2 NA|NA|NA E Belongs to the cysteine synthase cystathionine beta- synthase family HOOMBAJD_02781 568703.LGG_00567 1.8e-161 575.1 Lactobacillaceae metAA GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006563,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008374,GO:0008652,GO:0008899,GO:0009001,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016407,GO:0016412,GO:0016413,GO:0016740,GO:0016746,GO:0016747,GO:0016748,GO:0016750,GO:0019344,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.46 ko:K00651 ko00270,ko00920,ko01100,ko01110,ko01230,map00270,map00920,map01100,map01110,map01230 M00017 R01777 RC00004,RC00041 ko00000,ko00001,ko00002,ko01000 iHN637.CLJU_RS11970 Bacteria 1TQVR@1239,3F5CA@33958,4H9W4@91061,COG1897@1,COG1897@2 NA|NA|NA E Transfers an acetyl group from acetyl-CoA to HOOMBAJD_02782 568703.LGG_00558 7.6e-91 339.7 Lactobacillaceae ko:K08996 ko00000 Bacteria 1VX0K@1239,3F6A5@33958,4HX2R@91061,COG3477@1,COG3477@2 NA|NA|NA S Protein of unknown function (DUF1440) HOOMBAJD_02783 568703.LGG_00557 2.9e-238 830.9 Lactobacillaceae ko:K03292,ko:K16210 ko00000,ko02000 2.A.2,2.A.2.5 Bacteria 1VRWM@1239,3FBC3@33958,4HTJK@91061,COG2211@1,COG2211@2 NA|NA|NA G MFS/sugar transport protein HOOMBAJD_02784 568703.LGG_00555 3.8e-276 956.8 Lactobacillaceae ycaM GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K20265 ko02024,map02024 ko00000,ko00001,ko02000 2.A.3.7.1,2.A.3.7.3 Bacteria 1TRFS@1239,3FCAH@33958,4HBIP@91061,COG0531@1,COG0531@2 NA|NA|NA E amino acid HOOMBAJD_02785 568703.LGG_00554 0.0 1684.8 Lactobacillaceae pepN GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 3.4.11.2 ko:K01256,ko:K08776 ko00480,ko01100,map00480,map01100 R00899,R04951 RC00096,RC00141 ko00000,ko00001,ko01000,ko01002 Bacteria 1TR43@1239,3F3UH@33958,4HA20@91061,COG0308@1,COG0308@2 NA|NA|NA E aminopeptidase HOOMBAJD_02786 568703.LGG_00552 3e-07 61.2 Lactobacillaceae Bacteria 1U667@1239,2CZFI@1,30A49@2,3F761@33958,4IFWD@91061 NA|NA|NA HOOMBAJD_02787 568703.LGG_00552 1.4e-105 389.0 Lactobacillaceae Bacteria 1U667@1239,2CZFI@1,30A49@2,3F761@33958,4IFWD@91061 NA|NA|NA HOOMBAJD_02788 568703.LGG_00551 1.4e-198 698.7 Lactobacillaceae ko:K01992 M00254 ko00000,ko00002,ko02000 3.A.1 Bacteria 1UYXD@1239,28IVE@1,2Z8TU@2,3F500@33958,4HMX1@91061 NA|NA|NA HOOMBAJD_02789 568703.LGG_00550 1.4e-159 568.9 Lactobacillaceae ko:K01990 M00254 ko00000,ko00002,ko02000 3.A.1 Bacteria 1TRJH@1239,3F5Y2@33958,4HD67@91061,COG1131@1,COG1131@2 NA|NA|NA V ATPases associated with a variety of cellular activities HOOMBAJD_02790 568703.LGG_00549 7.9e-197 693.0 Lactobacillaceae Bacteria 1TS1G@1239,3F4NF@33958,4HBC0@91061,COG0642@1,COG2205@2 NA|NA|NA T HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain HOOMBAJD_02791 568703.LGG_00548 1.7e-75 288.5 Lactobacillaceae Bacteria 1TQ0D@1239,3F536@33958,4HHWT@91061,COG0745@1,COG0745@2 NA|NA|NA K Transcriptional regulatory protein, C terminal HOOMBAJD_02792 568703.LGG_00548 1.4e-38 165.2 Lactobacillaceae Bacteria 1TQ0D@1239,3F536@33958,4HHWT@91061,COG0745@1,COG0745@2 NA|NA|NA K Transcriptional regulatory protein, C terminal HOOMBAJD_02793 568703.LGG_00547 8.2e-296 1022.3 Lactobacillaceae Bacteria 1TQV6@1239,28IHZ@1,2Z8J5@2,3F5NC@33958,4HPC9@91061 NA|NA|NA S Psort location CytoplasmicMembrane, score HOOMBAJD_02794 568703.LGG_00546 1.6e-129 468.8 Lactobacillaceae XK27_12140 ko:K01990 M00254 ko00000,ko00002,ko02000 3.A.1 Bacteria 1TRTC@1239,3F59T@33958,4HG0J@91061,COG1131@1,COG1131@2 NA|NA|NA V ATPases associated with a variety of cellular activities HOOMBAJD_02795 568703.LGG_00545 1.9e-198 698.4 Lactobacillaceae Bacteria 1U6KS@1239,29PHK@1,30AFR@2,3F847@33958,4IGDI@91061 NA|NA|NA HOOMBAJD_02796 568703.LGG_00544 9.8e-127 459.5 Lactobacillaceae ko:K07090 ko00000 Bacteria 1VR9G@1239,3F3TR@33958,4HV4W@91061,COG0730@1,COG0730@2 NA|NA|NA S membrane transporter protein HOOMBAJD_02797 568703.LGG_00543 4e-59 233.8 Lactobacillaceae hxlR Bacteria 1VA9M@1239,3F7S1@33958,4HH0A@91061,COG1733@1,COG1733@2 NA|NA|NA K Transcriptional regulator, HxlR family HOOMBAJD_02798 568703.LGG_00542 2.3e-195 688.0 Lactobacillaceae qor 1.1.1.1,1.6.5.5 ko:K00001,ko:K00344 ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220 R00623,R00754,R02124,R04805,R04880,R05233,R05234,R06917,R06927,R07105,R08281,R08306,R08310 RC00050,RC00087,RC00088,RC00099,RC00116,RC00649,RC01734,RC02273 ko00000,ko00001,ko01000 Bacteria 1TRNC@1239,3F48F@33958,4HATC@91061,COG0604@1,COG0604@2 NA|NA|NA C Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily HOOMBAJD_02799 568703.LGG_00541 7.5e-163 579.7 Lactobacillaceae morA2 Bacteria 1TPM1@1239,3FB4S@33958,4HAG6@91061,COG0656@1,COG0656@2 NA|NA|NA S reductase HOOMBAJD_02800 568703.LGG_00540 1e-75 289.3 Lactobacillaceae Bacteria 1V3QI@1239,3F7ID@33958,4HH53@91061,COG0789@1,COG0789@2 NA|NA|NA K helix_turn_helix, mercury resistance HOOMBAJD_02801 568703.LGG_00539 1.7e-246 858.2 Lactobacillaceae Bacteria 1V01X@1239,3F7SQ@33958,4HVQJ@91061,COG0531@1,COG0531@2 NA|NA|NA E Amino acid permease HOOMBAJD_02802 568703.LGG_00538 1.2e-219 768.8 Lactobacillaceae ko:K07045 ko00000 Bacteria 1V9T6@1239,3F96M@33958,4HKS1@91061,COG2159@1,COG2159@2 NA|NA|NA S Amidohydrolase HOOMBAJD_02803 568703.LGG_00536 5.3e-256 889.8 Lactobacillaceae 6.3.1.2 ko:K01915 ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727 R00253 RC00010,RC02798 ko00000,ko00001,ko01000,ko04147 Bacteria 1U0IB@1239,3F98A@33958,4HTS7@91061,COG0174@1,COG0174@2 NA|NA|NA E Glutamine synthetase N-terminal domain HOOMBAJD_02804 1423732.BALS01000062_gene2205 3.3e-77 294.7 Lactobacillaceae Bacteria 1U65Z@1239,3F75B@33958,4IFW0@91061,COG5340@1,COG5340@2 NA|NA|NA K Psort location Cytoplasmic, score HOOMBAJD_02805 1423816.BACQ01000055_gene2117 2.4e-108 398.7 Lactobacillaceae Bacteria 1TSFX@1239,3F4R3@33958,4HGAF@91061,COG2253@1,COG2253@2 NA|NA|NA S Nucleotidyl transferase AbiEii toxin, Type IV TA system HOOMBAJD_02806 568703.LGG_00534 1.7e-140 505.4 Lactobacillaceae puuD ko:K07010 ko00000,ko01002 Bacteria 1V1KC@1239,3F4PK@33958,4HI59@91061,COG2071@1,COG2071@2 NA|NA|NA S peptidase C26 HOOMBAJD_02807 568703.LGG_00532 4e-133 480.7 Lactobacillaceae Bacteria 1UIIR@1239,3F5MJ@33958,4ISJH@91061,COG2227@1,COG2227@2 NA|NA|NA H Protein of unknown function (DUF1698) HOOMBAJD_02808 568703.LGG_00530 8e-191 672.9 Lactobacillaceae ykfB GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016854,GO:0034641,GO:0043167,GO:0043169,GO:0043603,GO:0044237,GO:0046872,GO:0071704,GO:1901564 5.1.1.20 ko:K19802 R10938 RC03309 ko00000,ko01000 Bacteria 1TQMS@1239,3F4XQ@33958,4HCY5@91061,COG4948@1,COG4948@2 NA|NA|NA M Belongs to the mandelate racemase muconate lactonizing enzyme family HOOMBAJD_02809 1423816.BACQ01000064_gene2486 2.4e-149 535.0 Lactobacillaceae Bacteria 1UZUZ@1239,3F969@33958,4IPQ5@91061,COG1680@1,COG1680@2 NA|NA|NA V Beta-lactamase HOOMBAJD_02810 568703.LGG_00526 1.2e-45 188.7 Lactobacillaceae Bacteria 1U6P2@1239,29PJA@1,30AHF@2,3F88B@33958,4IGG0@91061 NA|NA|NA HOOMBAJD_02811 568703.LGG_00525 0.0 1154.8 Lactobacillaceae poxB 1.2.3.3,1.2.5.1 ko:K00156,ko:K00158 ko00620,ko01100,map00620,map01100 R00207,R03145 RC00860,RC02745 ko00000,ko00001,ko01000 iSB619.SA_RS13340 Bacteria 1TQE8@1239,3F3R9@33958,4HBUS@91061,COG0028@1,COG0028@2 NA|NA|NA EH Belongs to the TPP enzyme family HOOMBAJD_02812 568703.LGG_00524 1e-167 595.9 Lactobacillaceae fba 4.1.2.13,4.1.2.29 ko:K01624,ko:K03339 ko00010,ko00030,ko00051,ko00562,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00562,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230 M00001,M00003,M00165,M00167,M00344,M00345 R01068,R01070,R01829,R02568,R05378 RC00438,RC00439,RC00603,RC00604,RC00721 ko00000,ko00001,ko00002,ko01000 Bacteria 1TQ01@1239,3F4EF@33958,4H9ZU@91061,COG0191@1,COG0191@2 NA|NA|NA G Fructose-1,6-bisphosphate aldolase, class II HOOMBAJD_02813 568703.LGG_00523 1.1e-33 148.7 Lactobacillaceae Bacteria 1W65H@1239,28UH9@1,2ZGN0@2,3F8A7@33958,4I0DI@91061 NA|NA|NA HOOMBAJD_02814 568703.LGG_00522 1.4e-104 385.6 Lactobacillaceae tag 3.2.2.20 ko:K01246 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Bacteria 1UYWG@1239,3F5KA@33958,4HGWW@91061,COG2818@1,COG2818@2 NA|NA|NA L glycosylase HOOMBAJD_02815 543734.LCABL_04990 1.1e-59 236.5 Lactobacillaceae ko:K03892 ko00000,ko03000 Bacteria 1V007@1239,3F7E5@33958,4HDXJ@91061,COG0640@1,COG0640@2 NA|NA|NA K Transcriptional HOOMBAJD_02816 1423734.JCM14202_2269 4.3e-123 448.0 Bacilli Bacteria 1UZT5@1239,4IPKX@91061,COG0640@1,COG0640@2 NA|NA|NA K helix_turn_helix, Arsenical Resistance Operon Repressor HOOMBAJD_02817 641146.HMPREF9020_01134 2.6e-141 508.8 Bifidobacteriales stp_1 Bacteria 2I4XI@201174,4D2SB@85004,COG0477@1,COG2814@2 NA|NA|NA EGP Major Facilitator Superfamily HOOMBAJD_02818 568703.LGG_00521 1.2e-203 715.7 Lactobacillaceae yceJ Bacteria 1TS6K@1239,3F4X1@33958,4HB1V@91061,COG0477@1,COG2814@2 NA|NA|NA EGP Major facilitator Superfamily HOOMBAJD_02819 568703.LGG_00520 2.7e-48 197.6 Lactobacillaceae Bacteria 1VAK2@1239,3F704@33958,4HMC7@91061,COG0640@1,COG0640@2 NA|NA|NA K Helix-turn-helix domain HOOMBAJD_02820 1423732.BALS01000020_gene355 3.7e-31 140.6 Lactobacillaceae relB ko:K07473 ko00000,ko02048 Bacteria 1U800@1239,3FADD@33958,4IHXE@91061,COG3077@1,COG3077@2 NA|NA|NA L RelB antitoxin HOOMBAJD_02821 655812.HMPREF0061_1590 6.2e-13 80.1 Aerococcaceae ko:K19157 ko00000,ko01000,ko02048 Bacteria 1VENE@1239,27EYR@186827,4HP52@91061,COG3041@1,COG3041@2 NA|NA|NA S Bacterial toxin of type II toxin-antitoxin system, YafQ HOOMBAJD_02822 568703.LGG_00518 5.2e-254 883.2 Lactobacillaceae Bacteria 1U7DD@1239,29Q2U@1,30B1F@2,3F9F1@33958,4IH99@91061 NA|NA|NA L Exonuclease HOOMBAJD_02824 568703.LGG_00516 8.9e-145 519.6 Lactobacillaceae ropB Bacteria 1UUY5@1239,3F7J8@33958,4I403@91061,COG1396@1,COG1396@2 NA|NA|NA K Helix-turn-helix domain HOOMBAJD_02826 568703.LGG_00512 2.8e-205 721.1 Lactobacillaceae Bacteria 1UXR6@1239,29XTC@1,30JJA@2,3FADP@33958,4IHXQ@91061 NA|NA|NA HOOMBAJD_02827 568703.LGG_00511 1.9e-121 441.8 Lactobacillaceae ko:K01990 M00254 ko00000,ko00002,ko02000 3.A.1 Bacteria 1UQMC@1239,3F6CK@33958,4HE32@91061,COG1131@1,COG1131@2 NA|NA|NA V ATPases associated with a variety of cellular activities HOOMBAJD_02828 568703.LGG_00510 2.4e-77 294.7 Lactobacillaceae ohr Bacteria 1VY9T@1239,3F7CX@33958,4HXI7@91061,COG1764@1,COG1764@2 NA|NA|NA O OsmC-like protein HOOMBAJD_02829 568703.LGG_00509 1.4e-189 668.7 Lactobacillaceae dhaK GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016052,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019637,GO:0019751,GO:0033554,GO:0034308,GO:0042180,GO:0042182,GO:0042802,GO:0044237,GO:0044238,GO:0044248,GO:0044262,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046365,GO:0047324,GO:0050896,GO:0051716,GO:0061610,GO:0071704,GO:1901135,GO:1901575,GO:1901615 2.7.1.121,2.7.1.28,2.7.1.29,4.6.1.15 ko:K00863,ko:K05878,ko:K05879 ko00051,ko00561,ko00680,ko01100,ko01120,ko01200,ko04622,map00051,map00561,map00680,map01100,map01120,map01200,map04622 M00344 R01011,R01012,R01059 RC00002,RC00015,RC00017 ko00000,ko00001,ko00002,ko01000 iEcHS_1320.EcHS_A1304,iUMNK88_1353.UMNK88_1515,iYL1228.KPN_03495 Bacteria 1TP92@1239,3F4F2@33958,4H9VS@91061,COG2376@1,COG2376@2 NA|NA|NA G Dak1 domain HOOMBAJD_02830 568703.LGG_00508 3.4e-103 380.9 Lactobacillaceae dhaL 2.7.1.121 ko:K05879 ko00561,ko01100,map00561,map01100 R01012 RC00015,RC00017 ko00000,ko00001,ko01000 Bacteria 1V4FH@1239,3F5VS@33958,4HGZY@91061,COG1461@1,COG1461@2 NA|NA|NA S Dak2 HOOMBAJD_02831 1423816.BACQ01000064_gene2472 9.6e-59 232.6 Lactobacillaceae dhaM GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237,GO:0047324 2.7.1.121 ko:K05881 ko00561,map00561 R01012 RC00015,RC00017 ko00000,ko00001,ko01000,ko02000 Bacteria 1VF32@1239,3F6YE@33958,4HKCN@91061,COG3412@1,COG3412@2 NA|NA|NA S PTS system fructose IIA component HOOMBAJD_02832 568703.LGG_00505 4e-104 384.0 Lactobacillaceae Bacteria 1VCF7@1239,3FBG6@33958,4IQ66@91061,COG1309@1,COG1309@2 NA|NA|NA K Bacterial regulatory proteins, tetR family HOOMBAJD_02833 568703.LGG_00504 9.4e-17 91.7 Lactobacillaceae Bacteria 1U86E@1239,29QJ1@1,30BIK@2,3FAKU@33958,4II3Y@91061 NA|NA|NA HOOMBAJD_02834 568703.LGG_00503 0.0 1152.5 Lactobacillaceae lai 4.2.1.53 ko:K10254 ko00000,ko01000 Bacteria 1TQZ6@1239,3F3QX@33958,4HAYH@91061,COG4716@1,COG4716@2 NA|NA|NA S Myosin-crossreactive antigen HOOMBAJD_02835 568703.LGG_00502 2.5e-175 621.3 Lactobacillaceae Bacteria 1U7BS@1239,29Q1F@1,30B00@2,3F9AV@33958,4IH72@91061 NA|NA|NA HOOMBAJD_02836 568703.LGG_00501 3.5e-196 690.6 Lactobacillaceae pac 3.5.1.24 ko:K01442 ko00120,ko00121,ko01100,map00120,map00121,map01100 R02797,R03975,R03977,R04486,R04487,R05835 RC00090,RC00096 ko00000,ko00001,ko01000 Bacteria 1UZCV@1239,3FB8Y@33958,4HFHU@91061,COG3049@1,COG3049@2 NA|NA|NA M Linear amide C-N hydrolases, choloylglycine hydrolase family HOOMBAJD_02837 568703.LGG_00500 7e-153 546.6 Lactobacillaceae metQ_4 ko:K02073 ko02010,map02010 M00238 ko00000,ko00001,ko00002,ko02000 3.A.1.24 Bacteria 1V0Z6@1239,3FC6K@33958,4HBBW@91061,COG1464@1,COG1464@2 NA|NA|NA P Belongs to the nlpA lipoprotein family HOOMBAJD_02840 1423816.BACQ01000064_gene2468 1.3e-07 62.8 Lactobacillaceae Bacteria 1U7BS@1239,29Q1F@1,30B00@2,3F9AV@33958,4IH72@91061 NA|NA|NA HOOMBAJD_02842 568703.LGG_00502 2.8e-09 68.6 Lactobacillaceae Bacteria 1U7BS@1239,29Q1F@1,30B00@2,3F9AV@33958,4IH72@91061 NA|NA|NA HOOMBAJD_02844 568703.LGG_00494 6.4e-142 510.0 Lactobacillaceae 2.7.7.47 ko:K00984 ko00000,ko01000,ko01504 Bacteria 1UCIC@1239,3F5YN@33958,4HEP7@91061,COG1708@1,COG1708@2 NA|NA|NA H Mediates bacterial resistance to the antibiotics streptomycin and spectomycin HOOMBAJD_02845 568703.LGG_00493 7.6e-45 186.0 Lactobacillaceae ko:K19157 ko00000,ko01000,ko02048 Bacteria 1U69Z@1239,3F7EP@33958,4IG17@91061,COG3041@1,COG3041@2 NA|NA|NA S Bacterial toxin of type II toxin-antitoxin system, YafQ HOOMBAJD_02846 568703.LGG_00492 5.1e-153 547.0 Lactobacillaceae Bacteria 1TR16@1239,3F55S@33958,4HCZ6@91061,COG0561@1,COG0561@2 NA|NA|NA S hydrolase HOOMBAJD_02847 568703.LGG_00491 1.3e-262 911.8 Lactobacillaceae npr 1.11.1.1 ko:K05910 ko00000,ko01000 Bacteria 1TPWW@1239,3F449@33958,4H9U7@91061,COG0446@1,COG0446@2 NA|NA|NA C NADH oxidase HOOMBAJD_02848 568703.LGG_00490 4.3e-121 440.7 Lactobacillaceae devA 3.6.3.25 ko:K02003,ko:K06020,ko:K09810 ko02010,map02010 M00255,M00258 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1,3.A.1.125 Bacteria 1TQP5@1239,3F4RP@33958,4HBXK@91061,COG1136@1,COG1136@2 NA|NA|NA V ABC transporter, ATP-binding protein HOOMBAJD_02849 568703.LGG_00489 1e-185 656.0 Lactobacillaceae hrtB ko:K02004 M00258 ko00000,ko00002,ko02000 3.A.1 Bacteria 1TWFZ@1239,3F3K5@33958,4H9RQ@91061,COG0577@1,COG0577@2 NA|NA|NA V ABC transporter permease HOOMBAJD_02850 568703.LGG_00488 1e-87 329.3 Lactobacillaceae ygfC Bacteria 1V4D3@1239,3F6ZM@33958,4HJ8Z@91061,COG1309@1,COG1309@2 NA|NA|NA K Bacterial regulatory proteins, tetR family HOOMBAJD_02851 543734.LCABL_12160 2.4e-30 139.4 Lactobacillaceae Bacteria 1UYJN@1239,3FBEE@33958,4HF8I@91061,COG4640@1,COG4640@2 NA|NA|NA S response to antibiotic HOOMBAJD_02852 568703.LGG_00486 2.5e-146 524.6 Lactobacillaceae yqfZ 3.2.1.17 ko:K01185,ko:K06417,ko:K07273 ko00000,ko01000 Bacteria 1V3SH@1239,3F6ZF@33958,4HNR1@91061,COG1388@1,COG1388@2,COG3757@1,COG3757@2 NA|NA|NA M hydrolase, family 25 HOOMBAJD_02853 568703.LGG_00485 1.3e-17 94.7 Lactobacillaceae Bacteria 1U8F6@1239,29QPW@1,30BPK@2,3FAX1@33958,4IID2@91061 NA|NA|NA S YvrJ protein family HOOMBAJD_02854 1121024.AUCD01000008_gene2120 2.3e-08 65.9 Carnobacteriaceae Bacteria 1VB21@1239,27GJ8@186828,4HMT8@91061,COG1595@1,COG1595@2 NA|NA|NA K DNA-templated transcription, initiation HOOMBAJD_02856 568703.LGG_00482 6.7e-128 463.4 Lactobacillaceae Bacteria 1U7IV@1239,29Q5Q@1,30B4M@2,3F9S6@33958,4IHFN@91061 NA|NA|NA HOOMBAJD_02857 568703.LGG_00481 1.6e-120 438.7 Lactobacillaceae ko:K16958,ko:K16959,ko:K16962 ko02010,map02010 M00585,M00586 ko00000,ko00001,ko00002,ko02000 3.A.1.3,3.A.1.3.13 Bacteria 1V4MI@1239,3F7Q4@33958,4IQKS@91061,COG0765@1,COG0765@2 NA|NA|NA P Binding-protein-dependent transport system inner membrane component HOOMBAJD_02858 568703.LGG_00480 3.4e-115 421.0 Lactobacillaceae ko:K16958,ko:K16959,ko:K16962 ko02010,map02010 M00585,M00586 ko00000,ko00001,ko00002,ko02000 3.A.1.3,3.A.1.3.13 Bacteria 1TY31@1239,3F64V@33958,4HBN2@91061,COG0765@1,COG0765@2 NA|NA|NA P Binding-protein-dependent transport system inner membrane component HOOMBAJD_02859 568703.LGG_00479 4.9e-162 577.0 Lactobacillaceae ko:K02424,ko:K16957 ko02010,map02010 M00234,M00585 ko00000,ko00001,ko00002,ko02000,ko02035 3.A.1.3.10,3.A.1.3.13,3.A.1.3.14 Bacteria 1UX4B@1239,3F613@33958,4HG72@91061,COG0834@1,COG0834@2 NA|NA|NA ET Bacterial periplasmic substrate-binding proteins HOOMBAJD_02860 568703.LGG_00478 5.4e-133 480.3 Lactobacillaceae ko:K16960 ko02010,map02010 M00585 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.3.13 Bacteria 1TNYD@1239,3F5KX@33958,4H9WY@91061,COG1126@1,COG1126@2 NA|NA|NA E ABC transporter HOOMBAJD_02861 568703.LGG_00477 2.5e-200 704.5 Lactobacillaceae odh 1.5.1.28 ko:K04940 ko00000,ko01000 Bacteria 1TUSI@1239,3F5C0@33958,4HDHM@91061,COG0240@1,COG0240@2 NA|NA|NA C NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain HOOMBAJD_02862 568703.LGG_00476 3.2e-275 953.7 Lactobacillaceae abgB 3.5.1.47 ko:K05823,ko:K12941 ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230 M00525 R02733 RC00064,RC00300 ko00000,ko00001,ko00002,ko01000,ko01002 Bacteria 1TQ7B@1239,3F5DP@33958,4HE6F@91061,COG1473@1,COG1473@2 NA|NA|NA S Peptidase dimerisation domain HOOMBAJD_02863 568703.LGG_00475 7.8e-211 739.6 Lactobacillaceae Bacteria 1UXYK@1239,3FCBT@33958,4HBU0@91061,COG2271@1,COG2271@2 NA|NA|NA G Major Facilitator Superfamily HOOMBAJD_02864 568703.LGG_00474 0.0 1460.3 Bacilli Bacteria 1TQGI@1239,4HVRP@91061,COG2207@1,COG2207@2,COG3664@1,COG3664@2 NA|NA|NA GK helix_turn_helix, arabinose operon control protein HOOMBAJD_02865 568703.LGG_00473 2.5e-163 581.3 Lactobacillaceae Bacteria 1V0Z0@1239,3F53H@33958,4ISD2@91061,COG2207@1,COG2207@2 NA|NA|NA K helix_turn_helix, arabinose operon control protein HOOMBAJD_02866 568703.LGG_00472 2.8e-263 914.1 Lactobacillaceae lysP ko:K03293,ko:K11733 ko00000,ko02000 2.A.3.1,2.A.3.1.2 Bacteria 1UHNR@1239,3F4BG@33958,4HUT7@91061,COG0833@1,COG0833@2 NA|NA|NA E amino acid HOOMBAJD_02867 568703.LGG_00471 3e-276 957.2 Lactobacillaceae ygjI GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K20265 ko02024,map02024 ko00000,ko00001,ko02000 2.A.3.7.1,2.A.3.7.3 Bacteria 1TRFS@1239,3F4J0@33958,4HA0N@91061,COG0531@1,COG0531@2 NA|NA|NA E Amino Acid HOOMBAJD_02868 568703.LGG_00470 0.0 2073.1 Lactobacillaceae ebgA 3.2.1.23 ko:K01190,ko:K12111 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 R01105,R01678,R03355,R04783,R06114 RC00049,RC00452 ko00000,ko00001,ko01000 Bacteria 1TPDC@1239,3F4EI@33958,4HANW@91061,COG3250@1,COG3250@2 NA|NA|NA G Belongs to the glycosyl hydrolase 2 family HOOMBAJD_02869 1423816.BACQ01000062_gene2418 1.3e-42 179.1 Lactobacillaceae Bacteria 1TRVX@1239,3F48I@33958,4HFSV@91061,COG0583@1,COG0583@2 NA|NA|NA K Transcriptional regulator, LysR family # 2629 queries scanned # Total time (seconds): 5.23243284225 # Rate: 502.44 q/s