GCA_004354505.1 - 9 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

PRKU01000066.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 8.1	RiPP-like	65,228	78,133

PRKU01000064.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 16.1	NRPS-like	1	7,587

PRKU01000077.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 28.1	RRE-containing	117,048	137,230

PRKU01000049.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 32.1	RiPP-like	1	2,413

PRKU01000073.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 37.1	RaS-RiPP	1	15,567

PRKU01000059.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 45.1	RiPP-like	1	7,626

PRKU01000021.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 72.1	RaS-RiPP	85,199	103,620

PRKU01000037.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 74.1	RiPP-like	32,306	42,584

PRKU01000061.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 75.1	RiPP-like	1	20,896

Region	Type	From	To	Similarity
Region 8.1	RiPP-like	65,228	78,133
Region 16.1	NRPS-like	1	7,587
Region 28.1	RRE-containing	117,048	137,230
Region 32.1	RiPP-like	1	2,413
Region 37.1	RaS-RiPP	1	15,567
Region 45.1	RiPP-like	1	7,626
Region 72.1	RaS-RiPP	85,199	103,620
Region 74.1	RiPP-like	32,306	42,584
Region 75.1	RiPP-like	1	20,896

No secondary metabolite regions were found in these records:: PRKU01000030.1; PRKU01000080.1; PRKU01000028.1; PRKU01000012.1; PRKU01000084.1; PRKU01000025.1; PRKU01000069.1; PRKU01000014.1; PRKU01000003.1; PRKU01000040.1; PRKU01000018.1; PRKU01000043.1; PRKU01000026.1; PRKU01000039.1; PRKU01000032.1; PRKU01000055.1; PRKU01000042.1; PRKU01000078.1; PRKU01000015.1; PRKU01000041.1; PRKU01000060.1; PRKU01000016.1; PRKU01000009.1; PRKU01000081.1; PRKU01000063.1; PRKU01000051.1; PRKU01000006.1; PRKU01000057.1; PRKU01000035.1; PRKU01000007.1; PRKU01000010.1; PRKU01000005.1; PRKU01000023.1; PRKU01000082.1; PRKU01000020.1; PRKU01000056.1; PRKU01000008.1; PRKU01000034.1; PRKU01000052.1; PRKU01000062.1; PRKU01000083.1; PRKU01000022.1; PRKU01000075.1; PRKU01000004.1; PRKU01000038.1; PRKU01000086.1; PRKU01000068.1; PRKU01000074.1; PRKU01000017.1; PRKU01000033.1; PRKU01000045.1; PRKU01000058.1; PRKU01000029.1; PRKU01000048.1; PRKU01000047.1; PRKU01000053.1; PRKU01000070.1; PRKU01000002.1; PRKU01000079.1; PRKU01000076.1; PRKU01000027.1; PRKU01000085.1; PRKU01000024.1; PRKU01000046.1; PRKU01000013.1; PRKU01000031.1; PRKU01000065.1

Compact view

PRKU01000066.1 - Region 1 - RiPP-like

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Location: 65,228 - 78,133 nt. (total: 12,906 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

PRKU01000064.1 - Region 1 - NRPS-like

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Location: 1 - 7,587 nt. (total: 7,587 nt) Show pHMM detection rules used

Region on contig edge.

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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NRPS/PKS domains

KnownClusterBlast

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters

No matches found.

PRKU01000077.1 - Region 1 - RRE-containing

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Location: 117,048 - 137,230 nt. (total: 20,183 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.

PRKU01000049.1 - Region 1 - RiPP-like

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Location: 1 - 2,413 nt. (total: 2,413 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.

PRKU01000073.1 - Region 1 - RaS-RiPP

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Location: 1 - 15,567 nt. (total: 15,567 nt) Show pHMM detection rules used

Region on contig edge.

RaS-RiPP: (PF04055 and TIGR01716)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

PRKU01000059.1 - Region 1 - RiPP-like

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Location: 1 - 7,626 nt. (total: 7,626 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.

PRKU01000021.1 - Region 1 - RaS-RiPP

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Location: 85,199 - 103,620 nt. (total: 18,422 nt) Show pHMM detection rules used

Region on contig edge.

RaS-RiPP: (PF04055 and TIGR01716)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.

PRKU01000037.1 - Region 1 - RiPP-like

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Location: 32,306 - 42,584 nt. (total: 10,279 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.

PRKU01000061.1 - Region 1 - RiPP-like

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Location: 1 - 20,896 nt. (total: 20,896 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.