GCA_004368425.1 - 2 region(s)

Identified primary metabolite regions

JXRJ01000001.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 1.1	Pyruvate2acetate-formate	SCFA	50,504	73,748	Pyruvate to acetate-formate E. coli	PFL_acetate	100%

JXRJ01000003.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 68.1	TPP_fatty_acids	Putative	12,636	38,336

No primary metabolite regions were found in these records:: JXRJ01000010.1; JXRJ01000099.1; JXRJ01000100.1; JXRJ01000101.1; JXRJ01000102.1; JXRJ01000103.1; JXRJ01000104.1; JXRJ01000105.1; JXRJ01000106.1; JXRJ01000107.1; JXRJ01000108.1; JXRJ01000011.1; JXRJ01000109.1; JXRJ01000110.1; JXRJ01000111.1; JXRJ01000112.1; JXRJ01000113.1; JXRJ01000114.1; JXRJ01000115.1; JXRJ01000116.1; JXRJ01000117.1; JXRJ01000012.1; JXRJ01000118.1; JXRJ01000119.1; JXRJ01000120.1; JXRJ01000121.1; JXRJ01000122.1; JXRJ01000123.1; JXRJ01000124.1; JXRJ01000013.1; JXRJ01000125.1; JXRJ01000126.1; JXRJ01000127.1; JXRJ01000128.1; JXRJ01000129.1; JXRJ01000130.1; JXRJ01000131.1; JXRJ01000132.1; JXRJ01000014.1; JXRJ01000133.1; JXRJ01000134.1; JXRJ01000135.1; JXRJ01000136.1; JXRJ01000137.1; JXRJ01000015.1; JXRJ01000138.1; JXRJ01000139.1; JXRJ01000140.1; JXRJ01000141.1; JXRJ01000142.1; JXRJ01000143.1; JXRJ01000016.1; JXRJ01000017.1; JXRJ01000018.1; JXRJ01000019.1; JXRJ01000002.1; JXRJ01000020.1; JXRJ01000021.1; JXRJ01000022.1; JXRJ01000023.1; JXRJ01000024.1; JXRJ01000025.1; JXRJ01000026.1; JXRJ01000027.1; JXRJ01000028.1; JXRJ01000029.1; JXRJ01000030.1; JXRJ01000031.1; JXRJ01000032.1; JXRJ01000033.1; JXRJ01000034.1; JXRJ01000035.1; JXRJ01000036.1; JXRJ01000037.1; JXRJ01000038.1; JXRJ01000039.1; JXRJ01000004.1; JXRJ01000040.1; JXRJ01000041.1; JXRJ01000042.1; JXRJ01000043.1; JXRJ01000044.1; JXRJ01000045.1; JXRJ01000046.1; JXRJ01000047.1; JXRJ01000048.1; JXRJ01000049.1; JXRJ01000005.1; JXRJ01000050.1; JXRJ01000051.1; JXRJ01000052.1; JXRJ01000053.1; JXRJ01000054.1; JXRJ01000055.1; JXRJ01000056.1; JXRJ01000057.1; JXRJ01000058.1; JXRJ01000059.1; JXRJ01000006.1; JXRJ01000060.1; JXRJ01000061.1; JXRJ01000062.1; JXRJ01000063.1; JXRJ01000064.1; JXRJ01000065.1; JXRJ01000066.1; JXRJ01000067.1; JXRJ01000068.1; JXRJ01000069.1; JXRJ01000007.1; JXRJ01000070.1; JXRJ01000071.1; JXRJ01000072.1; JXRJ01000073.1; JXRJ01000074.1; JXRJ01000075.1; JXRJ01000076.1; JXRJ01000077.1; JXRJ01000078.1; JXRJ01000079.1; JXRJ01000008.1; JXRJ01000080.1; JXRJ01000081.1; JXRJ01000082.1; JXRJ01000083.1; JXRJ01000084.1; JXRJ01000085.1; JXRJ01000086.1; JXRJ01000087.1; JXRJ01000088.1; JXRJ01000009.1; JXRJ01000089.1; JXRJ01000090.1; JXRJ01000091.1; JXRJ01000092.1; JXRJ01000093.1; JXRJ01000094.1; JXRJ01000095.1; JXRJ01000096.1; JXRJ01000097.1; JXRJ01000098.1

Compact view

JXRJ01000001.1 - Region 1 - Pyruvate2acetate-formate

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Location: 50,504 - 73,748 nt. (total: 23,245 nt) Show pHMM detection rules used

Pyruvate2acetate-formate: ((PFL_acetate1 or PFL_acetate2) and Radical_SAM)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

JXRJ01000003.1 - Region 1 - TPP_fatty_acids

Download region GenBank file

Location: 12,636 - 38,336 nt. (total: 25,701 nt) Show pHMM detection rules used

TPP_fatty_acids: (TPP_enzyme_C and (minimum(2, [ACD1_car, ACP_syn_III_C, AcetylCoA_hyd_C, AcetylCoA_hydro, Acyl-CoA_dh_1, Acyl-CoA_dh_2, Butyrate_kinase, CT_Propionyl_CoA1, CT_Propionyl_CoA2, CT_Propionyl_CoA3, Carboxyl_trans, CoA_trans, CoA_trans_230_acto, CoA_trans_2_CAF, CoA_trans_6_Glutaconate, E1_dh, ECH_1, ECH_2, HBT, HBT_2, HCDH, HpaB, Ketoacyl-synt_C, Thiolase_C, Thiolase_N, adh_short, adh_short_C2]) or FA_synthesis) and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and not (POR or POR_N))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.