GCA_005864145.1 - 4 region(s)

Identified primary metabolite regions

VBST01000003.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 3.1	Arginine2_Hcarbonate	Other	23,268	46,498	Arginine to hydrogen carbonate P. aeruginosa	ARG	100%

VBST01000018.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 18.1	fatty_acids-unassigned	Putative	1	24,208

VBST01000025.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 25.1	Nitrate_reductase	E-MGC	1	16,897	Nitrate reductase E. coli	NIR	40%

VBST01000041.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 41.1	gallic_acid_met	Aromatic	2,225	16,701	Gallic acid degradation B. sp. KLE	GALL	100%

No primary metabolite regions were found in these records:: VBST01000001.1; VBST01000002.1; VBST01000004.1; VBST01000005.1; VBST01000006.1; VBST01000007.1; VBST01000008.1; VBST01000009.1; VBST01000010.1; VBST01000011.1; VBST01000012.1; VBST01000013.1; VBST01000014.1; VBST01000015.1; VBST01000016.1; VBST01000017.1; VBST01000019.1; VBST01000020.1; VBST01000021.1; VBST01000022.1; VBST01000023.1; VBST01000024.1; VBST01000026.1; VBST01000027.1; VBST01000028.1; VBST01000029.1; VBST01000030.1; VBST01000031.1; VBST01000032.1; VBST01000033.1; VBST01000034.1; VBST01000035.1; VBST01000036.1; VBST01000037.1; VBST01000038.1; VBST01000039.1; VBST01000040.1; VBST01000042.1; VBST01000043.1; VBST01000044.1; VBST01000045.1; VBST01000046.1; VBST01000047.1; VBST01000048.1; VBST01000049.1; VBST01000050.1; VBST01000051.1; VBST01000052.1; VBST01000053.1; VBST01000054.1; VBST01000055.1; VBST01000056.1; VBST01000057.1; VBST01000058.1; VBST01000059.1; VBST01000060.1; VBST01000061.1; VBST01000062.1; VBST01000063.1; VBST01000064.1; VBST01000065.1; VBST01000066.1; VBST01000067.1; VBST01000068.1; VBST01000069.1; VBST01000070.1; VBST01000071.1; VBST01000072.1; VBST01000073.1; VBST01000074.1; VBST01000075.1; VBST01000076.1; VBST01000077.1; VBST01000078.1; VBST01000079.1; VBST01000080.1; VBST01000081.1; VBST01000082.1; VBST01000083.1; VBST01000084.1; VBST01000085.1; VBST01000086.1; VBST01000087.1; VBST01000088.1; VBST01000089.1; VBST01000090.1; VBST01000091.1; VBST01000092.1; VBST01000093.1; VBST01000094.1; VBST01000095.1; VBST01000096.1; VBST01000097.1; VBST01000098.1; VBST01000099.1; VBST01000100.1; VBST01000101.1; VBST01000102.1; VBST01000103.1; VBST01000104.1; VBST01000105.1; VBST01000106.1; VBST01000107.1; VBST01000108.1; VBST01000109.1; VBST01000110.1; VBST01000111.1; VBST01000112.1; VBST01000113.1; VBST01000114.1; VBST01000115.1; VBST01000116.1; VBST01000117.1

Compact view

VBST01000003.1 - Region 1 - Arginine2_Hcarbonate

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Location: 23,268 - 46,498 nt. (total: 23,231 nt) Show pHMM detection rules used

Arginine2_Hcarbonate: (Amidinotransf and OTCace and OTCace_N and AA_kinase)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

VBST01000018.1 - Region 1 - fatty_acids-unassigned

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Location: 1 - 24,208 nt. (total: 24,208 nt) Show pHMM detection rules used

Region on contig edge.

fatty_acids-unassigned: (not (EC1_2-faecali or baiH or baiCD or ECH1_Enoyl_CoA_DH1 or ECH1_Enoyl_CoA_DH2 or ECH1_Enoyl_CoA_DH3 or ECH1_Enoyl_CoA_DH4 or POR or POR_N or PFOR_II) and minimum(4, [AcetylCoA_hyd_C, Acyl-CoA_dh_1, Acyl-CoA_dh_2, EC1_2-faecali, ECH1_8_CARC, ECH_1, ECH_2, HBT, HCDH, HCDH_N, Thiolase_C, Thiolase_N, ketoacyl-synt]))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

VBST01000025.1 - Region 1 - Nitrate_reductase

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Location: 1 - 16,897 nt. (total: 16,897 nt) Show pHMM detection rules used

Region on contig edge.

Nitrate_reductase: (Nitr_red_bet_C and Nitrate_red_del and Nitrate_red_gam and Molybdopterin and minimum(2, [Fer4_11, Molybdopterin, Molydop_binding, Nitr_red_alph_N]))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

VBST01000041.1 - Region 1 - gallic_acid_met

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Location: 2,225 - 16,701 nt. (total: 14,477 nt) Show pHMM detection rules used

Region on contig edge.

gallic_acid_met: (minimum(1, [Flavoprotein, Semialdhyde_dh]) and gallic_acid)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters