GCA_008672675.1 - 2 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

RPVY01000012.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 13.1	NRPS-like	227,829	270,840

RPVY01000023.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 17.1	lassopeptide	1	4,953

Region	Type	From	To	Most similar known cluster	Similarity
Region 13.1	NRPS-like	227,829	270,840
Region 17.1	lassopeptide	1	4,953

No secondary metabolite regions were found in these records:: RPVY01000003.1; RPVY01000021.1; RPVY01000035.1; RPVY01000014.1; RPVY01000008.1; RPVY01000025.1; RPVY01000013.1; RPVY01000005.1; RPVY01000029.1; RPVY01000006.1; RPVY01000027.1; RPVY01000020.1; RPVY01000022.1; RPVY01000009.1; RPVY01000007.1; RPVY01000033.1; RPVY01000032.1; RPVY01000018.1; RPVY01000002.1; RPVY01000024.1; RPVY01000011.1; RPVY01000028.1; RPVY01000016.1; RPVY01000001.1; RPVY01000030.1; RPVY01000017.1; RPVY01000010.1; RPVY01000026.1; RPVY01000004.1; RPVY01000019.1; RPVY01000034.1; RPVY01000015.1; RPVY01000031.1

Compact view

RPVY01000012.1 - Region 1 - NRPS-like

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Location: 227,829 - 270,840 nt. (total: 43,012 nt) Show pHMM detection rules used

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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NRPS/PKS domains

KnownClusterBlast

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters

No matches found.

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 227828 - 270840:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg13_206

Search NORINE for peptide: strict or relaxed

AMP-binding (14..381): X

NRPSPredictor2: gly, ala

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: gly, ala, val, leu, ile, abu, iva
Small clusters prediction:: gly, ala
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DfftIGiIYK
Nearest Stachelhaus code:: leu
Stachelhaus code match:: 60% (weak)

RPVY01000023.1 - Region 1 - lassopeptide

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Location: 1 - 4,953 nt. (total: 4,953 nt) Show pHMM detection rules used

Region on contig edge.

lassopeptide: (PF13471 and Asn_synthase or micJ25 or mcjC)