GCA_008904885.1 - 2 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

VTDA01000028.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 21.1	RiPP-like	19,046	27,803

VTDA01000031.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 25.1	RiPP-like	1	5,781

Region	Type	From	To	Most similar known cluster	Similarity
Region 21.1	RiPP-like	19,046	27,803
Region 25.1	RiPP-like	1	5,781

No secondary metabolite regions were found in these records:: VTDA01000001.1; VTDA01000002.1; VTDA01000011.1; VTDA01000012.1; VTDA01000013.1; VTDA01000014.1; VTDA01000015.1; VTDA01000016.1; VTDA01000017.1; VTDA01000018.1; VTDA01000019.1; VTDA01000020.1; VTDA01000003.1; VTDA01000021.1; VTDA01000022.1; VTDA01000023.1; VTDA01000024.1; VTDA01000025.1; VTDA01000026.1; VTDA01000027.1; VTDA01000029.1; VTDA01000030.1; VTDA01000004.1; VTDA01000032.1; VTDA01000033.1; VTDA01000034.1; VTDA01000035.1; VTDA01000036.1; VTDA01000037.1; VTDA01000038.1; VTDA01000039.1; VTDA01000040.1; VTDA01000005.1; VTDA01000041.1; VTDA01000042.1; VTDA01000043.1; VTDA01000044.1; VTDA01000045.1; VTDA01000046.1; VTDA01000047.1; VTDA01000048.1; VTDA01000049.1; VTDA01000050.1; VTDA01000006.1; VTDA01000051.1; VTDA01000052.1; VTDA01000053.1; VTDA01000054.1; VTDA01000055.1; VTDA01000056.1; VTDA01000057.1; VTDA01000058.1; VTDA01000059.1; VTDA01000060.1; VTDA01000007.1; VTDA01000061.1; VTDA01000062.1; VTDA01000063.1; VTDA01000064.1; VTDA01000065.1; VTDA01000066.1; VTDA01000067.1; VTDA01000068.1; VTDA01000069.1; VTDA01000070.1; VTDA01000008.1; VTDA01000071.1; VTDA01000009.1; VTDA01000010.1

Compact view

VTDA01000028.1 - Region 1 - RiPP-like

Download region GenBank file

Download region SVG

Location: 19,046 - 27,803 nt. (total: 8,758 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.

VTDA01000031.1 - Region 1 - RiPP-like