GCA_009649645.1 - 2 region(s)

Identified primary metabolite regions

WJMV01000022.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 14.1	Nitrate_reductase	E-MGC	14,856	35,100	Nitrate reductase E. coli	NIR	40%

WJMV01000029.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 21.1	TPP_AA_metabolism	Putative	8,354	31,106

No primary metabolite regions were found in these records:: WJMV01000010.1; WJMV01000011.1; WJMV01000012.1; WJMV01000013.1; WJMV01000014.1; WJMV01000015.1; WJMV01000016.1; WJMV01000017.1; WJMV01000018.1; WJMV01000019.1; WJMV01000001.1; WJMV01000020.1; WJMV01000021.1; WJMV01000023.1; WJMV01000024.1; WJMV01000025.1; WJMV01000026.1; WJMV01000027.1; WJMV01000028.1; WJMV01000002.1; WJMV01000030.1; WJMV01000031.1; WJMV01000032.1; WJMV01000033.1; WJMV01000034.1; WJMV01000035.1; WJMV01000036.1; WJMV01000037.1; WJMV01000038.1; WJMV01000039.1; WJMV01000003.1; WJMV01000040.1; WJMV01000041.1; WJMV01000042.1; WJMV01000043.1; WJMV01000044.1; WJMV01000045.1; WJMV01000046.1; WJMV01000047.1; WJMV01000048.1; WJMV01000049.1; WJMV01000004.1; WJMV01000050.1; WJMV01000051.1; WJMV01000052.1; WJMV01000053.1; WJMV01000054.1; WJMV01000055.1; WJMV01000056.1; WJMV01000057.1; WJMV01000058.1; WJMV01000059.1; WJMV01000005.1; WJMV01000060.1; WJMV01000061.1; WJMV01000062.1; WJMV01000063.1; WJMV01000064.1; WJMV01000065.1; WJMV01000066.1; WJMV01000067.1; WJMV01000068.1; WJMV01000069.1; WJMV01000006.1; WJMV01000070.1; WJMV01000071.1; WJMV01000072.1; WJMV01000073.1; WJMV01000074.1; WJMV01000075.1; WJMV01000007.1; WJMV01000008.1; WJMV01000009.1

Compact view

WJMV01000022.1 - Region 1 - Nitrate_reductase

Download region GenBank file

Location: 14,856 - 35,100 nt. (total: 20,245 nt) Show pHMM detection rules used

Region on contig edge.

Nitrate_reductase: (Nitr_red_bet_C and Nitrate_red_del and Nitrate_red_gam and Molybdopterin and minimum(2, [Fer4_11, Molybdopterin, Molydop_binding, Nitr_red_alph_N]))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

WJMV01000029.1 - Region 1 - TPP_AA_metabolism

Download region GenBank file

Location: 8,354 - 31,106 nt. (total: 22,753 nt) Show pHMM detection rules used

Region on contig edge.

TPP_AA_metabolism: (TPP_enzyme_C and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or Gly_8-9_TMA or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and minimum(2, [ALS_ss_C, AlaDh_PNT_C, Arginase, BKACE, BcrAD_BadFG, Beta_elim_lyase, CPSase_L_D2, Cys_Met_Meta_PP, ELFV_dehydrog, GRDB, Glu_syn_central, Glu_synthase, Gly_reductase, HAAA1, HG2B1, HG2B2, HGD-D, HleuD1, HleuD2, HleuS1, HleuS2, Homoserine_dh, ILVD_EDD, IlvC, Lactoyl-CoA1, Lactoyl-CoA2, Lyase_aromatic, MAAL_C, OKR_DC_1_5_lysine, OKR_DC_1_5_ornithine, OKR_DC_1_7_arginine, OKR_DC_1_C, OTCace, PALP, Proline_reductase, Sacchrp_dh_C, TPL, Thr_dehydrat_C, TnaA, Urocanase]) and not (POR or POR_N or PFOR_II))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.