GCA_009866205.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

VSUN01000014.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 6.1	T3PKS	1	31,631

VSUN01000007.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 50.1	RiPP-like	22,253	32,671	salivaricin CRL1328 α peptide / salivaricin CRL1328 β peptide	RiPP	58%
Region 50.2	lanthipeptide-class-i	45,621	71,587	nisin Q	RiPP:Lanthipeptide	63%

Region	Type	From	To	Most similar known cluster	Similarity
Region 6.1	T3PKS	1	31,631
Region 50.1	RiPP-like	22,253	32,671	salivaricin CRL1328 α peptide / salivaricin CRL1328 β peptide	RiPP	58%
Region 50.2	lanthipeptide-class-i	45,621	71,587	nisin Q	RiPP:Lanthipeptide	63%

No secondary metabolite regions were found in these records:: VSUN01000001.1; VSUN01000010.1; VSUN01000011.1; VSUN01000012.1; VSUN01000013.1; VSUN01000015.1; VSUN01000016.1; VSUN01000017.1; VSUN01000018.1; VSUN01000019.1; VSUN01000002.1; VSUN01000020.1; VSUN01000021.1; VSUN01000022.1; VSUN01000023.1; VSUN01000024.1; VSUN01000025.1; VSUN01000026.1; VSUN01000027.1; VSUN01000028.1; VSUN01000003.1; VSUN01000029.1; VSUN01000030.1; VSUN01000031.1; VSUN01000032.1; VSUN01000033.1; VSUN01000034.1; VSUN01000004.1; VSUN01000035.1; VSUN01000036.1; VSUN01000037.1; VSUN01000038.1; VSUN01000039.1; VSUN01000040.1; VSUN01000041.1; VSUN01000042.1; VSUN01000043.1; VSUN01000044.1; VSUN01000005.1; VSUN01000045.1; VSUN01000046.1; VSUN01000047.1; VSUN01000048.1; VSUN01000049.1; VSUN01000050.1; VSUN01000051.1; VSUN01000052.1; VSUN01000006.1; VSUN01000008.1; VSUN01000009.1

Compact view

VSUN01000014.1 - Region 1 - T3PKS

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Location: 1 - 31,631 nt. (total: 31,631 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

VSUN01000007.1 - Region 1 - RiPP-like

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Location: 22,253 - 32,671 nt. (total: 10,419 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

VSUN01000007.1 - Region 2 - lanthipeptide-class-i

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Location: 45,621 - 71,587 nt. (total: 25,967 nt) Show pHMM detection rules used

lanthipeptide-class-i: ((LANC_like and (Lant_dehydr_N or Lant_dehydr_C)) and not (YcaO or TIGR03882))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Lanthipeptides

KnownClusterBlast

Lanthipeptide predictions

Lanthipeptide(s) for ctg50_63 - Putative Class I

ctg50_62 leader / core peptide: MSVNDFKLDLVKVSKESTNSNYSVK - IDhbDhaYDhaLCDhbPGCKDhbGALMGCDhbMKDhbADhaCGCHVHIDhaK

Legend:

Dha: Didehydroalanine
Dhb: Didehydrobutyrine

Similar known gene clusters

Lanthipeptides

Core peptide predictions

ctg50_62 - Class I

Cleavage pHMM score: 12.40

RODEO score: 26

Monoisotopic mass: 3326.6 Da

Molecular weight: 3329.0 Da

Number of bridges: 5

Alternative weights: (assuming N unmodified Ser/Thr residues); 3347.0 Da N = 1; 3365.0 Da N = 2; 3383.0 Da N = 3; 3401.1 Da N = 4