# emapper version: emapper-2.0.1b-2-g816e190 emapper DB: 2.0 # command: ./emapper.py -i Streptococcus_thermophilus/1.contigAnn/FFN/A00000058.ffn --translate --temp_dir Streptococcus_thermophilus/4.eggNOG_mapper --output_dir Streptococcus_thermophilus/4.eggNOG_mapper --output A00000058 --cpu 36 --keep_mapping_files -m diamond # time: Wed Jul 13 10:01:14 2022 #query_name seed_eggNOG_ortholog seed_ortholog_evalue seed_ortholog_score best_tax_level Preferred_name GOs EC KEGG_ko KEGG_Pathway KEGG_Module KEGG_Reaction KEGG_rclass BRITE KEGG_TC CAZy BiGG_Reaction taxonomic scope eggNOG OGs best eggNOG OG COG Functional cat. eggNOG free text desc. IIAPBPCI_00001 322159.STER_0763 1.3e-94 352.4 Firmicutes ko:K07485 ko00000 Bacteria 1TQ93@1239,COG3464@1,COG3464@2 NA|NA|NA L Transposase IIAPBPCI_00002 264199.stu1671 2.3e-164 584.7 Bacilli gla ko:K02440 ko00000,ko02000 1.A.8.1,1.A.8.2 Bacteria 1TP4T@1239,4HE39@91061,COG0580@1,COG0580@2 NA|NA|NA U Belongs to the MIP aquaporin (TC 1.A.8) family IIAPBPCI_00003 322159.STER_1633 0.0 1515.7 Bacilli pepX 3.4.14.11 ko:K01281 ko00000,ko01000,ko01002 Bacteria 1TT78@1239,4HBA0@91061,COG2936@1,COG2936@2 NA|NA|NA E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline IIAPBPCI_00006 322159.STER_1636 3e-47 194.1 Bacteria spiA ko:K18831 ko00000,ko02048,ko03000 Bacteria COG1476@1,COG1476@2 NA|NA|NA K sequence-specific DNA binding IIAPBPCI_00007 904306.HMPREF9192_0691 9.5e-140 503.1 Bacilli blpT Bacteria 1W6SH@1239,2DWQH@1,341F6@2,4HX74@91061 NA|NA|NA IIAPBPCI_00016 862971.SANR_0567 6.7e-26 122.9 Streptococcus anginosus group Bacteria 1TVYK@1239,2DITH@1,3043M@2,42EF9@671232,4I4KQ@91061 NA|NA|NA S Bacteriocin class II with double-glycine leader peptide IIAPBPCI_00023 862971.SANR_0567 6.7e-26 122.9 Streptococcus anginosus group Bacteria 1TVYK@1239,2DITH@1,3043M@2,42EF9@671232,4I4KQ@91061 NA|NA|NA S Bacteriocin class II with double-glycine leader peptide IIAPBPCI_00024 322159.STER_1649 7.4e-135 486.5 Bacteria agrA ko:K07707 ko02020,ko02024,map02020,map02024 M00495 ko00000,ko00001,ko00002,ko02022 Bacteria COG3279@1,COG3279@2 NA|NA|NA KT phosphorelay signal transduction system IIAPBPCI_00025 322159.STER_1650 9.9e-239 832.4 Bacteria blpH 2.7.13.3 ko:K07706 ko02020,ko02024,map02020,map02024 M00495 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Bacteria COG3290@1,COG3290@2 NA|NA|NA T protein histidine kinase activity IIAPBPCI_00027 322159.STER_1652 7.3e-237 826.2 Bacilli mesE GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K20345 ko02024,map02024 ko00000,ko00001,ko02000 3.A.1.112,8.A.1 Bacteria 1V5C8@1239,4HHKB@91061,COG0845@1,COG0845@2 NA|NA|NA M Transport protein ComB IIAPBPCI_00028 264199.stu1691 0.0 1374.8 Bacilli comA ko:K06147,ko:K06148,ko:K20344 ko02010,ko02024,map02010,map02024 ko00000,ko00001,ko02000 3.A.1,3.A.1.106,3.A.1.109,3.A.1.112,3.A.1.21 Bacteria 1V77J@1239,4HAX2@91061,COG2274@1,COG2274@2 NA|NA|NA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain IIAPBPCI_00030 264199.stu1693 0.0 1084.7 Bacilli mdlB GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005319,GO:0005488,GO:0005524,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006869,GO:0008144,GO:0008150,GO:0010876,GO:0015399,GO:0015405,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0030554,GO:0031224,GO:0032553,GO:0032555,GO:0032559,GO:0033036,GO:0034040,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0043167,GO:0043168,GO:0043492,GO:0044425,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363 ko:K06147,ko:K18890 ko02010,map02010 M00707 ko00000,ko00001,ko00002,ko02000 3.A.1.106,3.A.1.106.13,3.A.1.106.5,3.A.1.109,3.A.1.21 Bacteria 1TP0B@1239,4HA3S@91061,COG1132@1,COG1132@2 NA|NA|NA V abc transporter atp-binding protein IIAPBPCI_00031 264199.stu1694 0.0 1111.3 Bacilli mdlA GO:0000166,GO:0003674,GO:0005488,GO:0005524,GO:0005575,GO:0005623,GO:0005886,GO:0008144,GO:0016020,GO:0016021,GO:0017076,GO:0030554,GO:0031224,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044425,GO:0044464,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363 ko:K06148,ko:K18889 ko02010,map02010 M00707 ko00000,ko00001,ko00002,ko02000 3.A.1,3.A.1.106.13,3.A.1.106.5 Bacteria 1TP0B@1239,4HA3S@91061,COG1132@1,COG1132@2 NA|NA|NA V abc transporter atp-binding protein IIAPBPCI_00033 264199.stu1695 1.7e-93 348.6 Bacilli XK27_09885 Bacteria 1VKIA@1239,4HQZW@91061,COG4767@1,COG4767@2 NA|NA|NA V Glycopeptide antibiotics resistance protein IIAPBPCI_00034 322159.STER_1660 3e-223 780.8 Bacilli rlmN GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.192 ko:K06941 ko00000,ko01000,ko03009 Bacteria 1TPVF@1239,4H9NU@91061,COG0820@1,COG0820@2 NA|NA|NA J Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs IIAPBPCI_00035 322159.STER_1661 2.4e-66 258.8 Bacilli yutD Bacteria 1VA85@1239,4HKF7@91061,COG4470@1,COG4470@2 NA|NA|NA J protein conserved in bacteria IIAPBPCI_00036 322159.STER_1662 5.3e-267 926.4 Bacilli yunD 3.1.3.5 ko:K01081 ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110 R00183,R00511,R00963,R01126,R01227,R01569,R01664,R01968,R02088,R02102,R02323,R02719,R03346 RC00017 ko00000,ko00001,ko01000 Bacteria 1TQCW@1239,4HAUC@91061,COG0737@1,COG0737@2 NA|NA|NA F Belongs to the 5'-nucleotidase family IIAPBPCI_00038 322159.STER_1664 1.4e-221 775.4 Bacilli cshB GO:0000166,GO:0003674,GO:0003676,GO:0003723,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006807,GO:0006950,GO:0008026,GO:0008144,GO:0008150,GO:0008152,GO:0008186,GO:0009266,GO:0009295,GO:0009409,GO:0009628,GO:0009987,GO:0010501,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043590,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0070035,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:1901265,GO:1901360,GO:1901363 3.6.4.13 ko:K05592,ko:K18692 ko03018,map03018 ko00000,ko00001,ko01000,ko03009,ko03019 Bacteria 1TPAP@1239,4HA98@91061,COG0513@1,COG0513@2 NA|NA|NA JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures IIAPBPCI_00039 322159.STER_1665 6.3e-185 653.3 Bacilli mraY GO:0000270,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008963,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016020,GO:0016740,GO:0016772,GO:0016780,GO:0030203,GO:0034645,GO:0040007,GO:0042546,GO:0042802,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0044464,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0071944,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 2.7.8.13 ko:K01000 ko00550,ko01100,ko01502,map00550,map01100,map01502 R05629,R05630 RC00002,RC02753 ko00000,ko00001,ko01000,ko01011 9.B.146 iAF987.Gmet_0409,iEC042_1314.EC042_0088,iECABU_c1320.ECABU_c00920,iECED1_1282.ECED1_0088,iECH74115_1262.ECH74115_0095,iECSP_1301.ECSP_0090,iECs_1301.ECs0091,iG2583_1286.G2583_0091,iSDY_1059.SDY_0117,iZ_1308.Z0097,ic_1306.c0105 Bacteria 1TP8W@1239,4H9TP@91061,COG0472@1,COG0472@2 NA|NA|NA M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan IIAPBPCI_00040 322159.STER_1666 0.0 1455.7 Bacilli ftsI GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0008144,GO:0008150,GO:0008658,GO:0008955,GO:0009987,GO:0016020,GO:0016021,GO:0016740,GO:0016757,GO:0016758,GO:0031224,GO:0031226,GO:0031406,GO:0032153,GO:0033218,GO:0033293,GO:0036094,GO:0042221,GO:0042493,GO:0043167,GO:0043168,GO:0043177,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051301,GO:0071944,GO:0097159,GO:1901363,GO:1901681 3.4.16.4 ko:K03587,ko:K08384,ko:K08724,ko:K12552,ko:K12556 ko00550,ko01100,ko01501,map00550,map01100,map01501 ko00000,ko00001,ko01000,ko01011,ko03036 iSSON_1240.SSON_0092 Bacteria 1TP93@1239,4H9VQ@91061,COG0768@1,COG0768@2 NA|NA|NA M penicillin-binding protein IIAPBPCI_00041 322159.STER_1667 4.3e-47 193.7 Bacilli ftsL Bacteria 1VCE5@1239,4HM4W@91061,COG4839@1,COG4839@2 NA|NA|NA D cell division protein FtsL IIAPBPCI_00042 322159.STER_1668 3e-157 561.2 Bacilli rsmH GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.199 ko:K03438 ko00000,ko01000,ko03009 Bacteria 1TNZV@1239,4H9U2@91061,COG0275@1,COG0275@2 NA|NA|NA J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA IIAPBPCI_00043 264199.stu1704 1.6e-65 255.4 Bacilli Bacteria 1W5UA@1239,2DDKD@1,2ZIF1@2,4HZND@91061 NA|NA|NA IIAPBPCI_00044 264199.stu1704 7.4e-27 125.9 Bacilli Bacteria 1W5UA@1239,2DDKD@1,2ZIF1@2,4HZND@91061 NA|NA|NA IIAPBPCI_00045 264199.stu1704 7.5e-30 136.7 Bacilli Bacteria 1W5UA@1239,2DDKD@1,2ZIF1@2,4HZND@91061 NA|NA|NA IIAPBPCI_00046 1046629.Ssal_00333 8.7e-33 146.4 Bacilli yhaI Bacteria 1V90R@1239,4HQ7Q@91061,COG3152@1,COG3152@2 NA|NA|NA J Protein of unknown function (DUF805) IIAPBPCI_00047 435842.HMPREF0848_01480 4.5e-18 97.1 Bacteria Bacteria COG1196@1,COG1196@2 NA|NA|NA D nuclear chromosome segregation IIAPBPCI_00048 322159.STER_1675 2e-225 788.1 Bacilli proA GO:0003674,GO:0003824,GO:0004350,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006560,GO:0006561,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016491,GO:0016620,GO:0016903,GO:0017144,GO:0018130,GO:0019752,GO:0042802,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0055114,GO:0055129,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.2.1.41 ko:K00147 ko00330,ko00332,ko01100,ko01110,ko01130,ko01230,map00330,map00332,map01100,map01110,map01130,map01230 M00015 R03313 RC00684 ko00000,ko00001,ko00002,ko01000 iB21_1397.B21_00243,iECBD_1354.ECBD_3376,iECB_1328.ECB_00240,iECD_1391.ECD_00240,iLJ478.TM0293,iYL1228.KPN_00280,iYO844.BSU13130 Bacteria 1TQ9V@1239,4HB7B@91061,COG0014@1,COG0014@2 NA|NA|NA E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate IIAPBPCI_00049 904306.HMPREF9192_0659 2.6e-141 508.1 Bacilli proB GO:0003674,GO:0003824,GO:0004349,GO:0004350,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006560,GO:0006561,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016491,GO:0016620,GO:0016740,GO:0016772,GO:0016774,GO:0016903,GO:0018130,GO:0019202,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.11 ko:K00931 ko00330,ko00332,ko01100,ko01130,ko01230,map00330,map00332,map01100,map01130,map01230 M00015 R00239 RC00002,RC00043 ko00000,ko00001,ko00002,ko01000 Bacteria 1TPG6@1239,4HA9B@91061,COG0263@1,COG0263@2 NA|NA|NA E Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate IIAPBPCI_00050 322159.STER_1677 5.8e-286 989.6 Bacilli XK27_00765 ko:K01992 M00254 ko00000,ko00002,ko02000 3.A.1 Bacteria 1TSZA@1239,28MBB@1,2ZAPV@2,4HDKH@91061 NA|NA|NA IIAPBPCI_00051 1046629.Ssal_00328 8.1e-134 483.0 Bacilli ecsA_2 ko:K01990 M00254 ko00000,ko00002,ko02000 3.A.1 Bacteria 1TQIH@1239,4HCEU@91061,COG1131@1,COG1131@2 NA|NA|NA V abc transporter atp-binding protein IIAPBPCI_00052 904306.HMPREF9192_0656 5.2e-125 453.8 Bacilli ko:K07150 ko00000 Bacteria 1TQWV@1239,4HEYY@91061,COG1811@1,COG1811@2 NA|NA|NA S Protein of unknown function (DUF554) IIAPBPCI_00053 322159.STER_1681 0.0 2311.2 Bacilli addA 3.6.4.12 ko:K16898 ko00000,ko01000,ko03400 Bacteria 1TQ35@1239,4HA64@91061,COG1074@1,COG1074@2 NA|NA|NA L ATP-dependent helicase nuclease subunit A IIAPBPCI_00054 264199.stu1717 0.0 2120.1 Bacilli rexB GO:0003674,GO:0003678,GO:0003824,GO:0004003,GO:0004386,GO:0004518,GO:0004519,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016788,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032392,GO:0032508,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051276,GO:0051716,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0140097,GO:1901360 3.1.21.3,3.6.4.12 ko:K01153,ko:K16899 ko00000,ko01000,ko02048,ko03400 Bacteria 1TQJW@1239,4HAY6@91061,COG3857@1,COG3857@2 NA|NA|NA L The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination IIAPBPCI_00055 435842.HMPREF0848_01378 2.4e-55 221.5 Bacilli liaI ko:K11619 ko02020,map02020 M00754 ko00000,ko00001,ko00002 Bacteria 1VGSF@1239,4IRBC@91061,COG4758@1,COG4758@2 NA|NA|NA S membrane IIAPBPCI_00056 435842.HMPREF0848_01379 2.7e-09 67.0 Bacilli XK27_02470 Bacteria 1VBF7@1239,4HHGZ@91061,COG3279@1,COG3279@2 NA|NA|NA K LytTr DNA-binding domain protein IIAPBPCI_00057 1046629.Ssal_00311 3e-53 214.5 Bacteria Bacteria COG4640@1,COG4640@2 NA|NA|NA KT response to antibiotic IIAPBPCI_00058 1046629.Ssal_00311 1.4e-08 65.5 Bacteria Bacteria COG4640@1,COG4640@2 NA|NA|NA KT response to antibiotic IIAPBPCI_00059 1046629.Ssal_00311 9.1e-18 95.1 Bacteria Bacteria COG4640@1,COG4640@2 NA|NA|NA KT response to antibiotic IIAPBPCI_00060 435842.HMPREF0848_01381 9.8e-80 303.5 Bacilli yebC ko:K16637 ko00000,ko02042 Bacteria 1VK5M@1239,4HS44@91061,COG3064@1,COG3064@2 NA|NA|NA M Membrane IIAPBPCI_00061 1046629.Ssal_00310 1.1e-16 92.0 Bacilli yebC ko:K16637 ko00000,ko02042 Bacteria 1VK5M@1239,4HS44@91061,COG3064@1,COG3064@2 NA|NA|NA M Membrane IIAPBPCI_00062 904306.HMPREF9192_0643 1.2e-258 898.7 Bacilli XK27_03190 ko:K16785 ko02010,map02010 M00582 ko00000,ko00001,ko00002,ko02000 3.A.1.25,3.A.1.28,3.A.1.29,3.A.1.30,3.A.1.31,3.A.1.32,3.A.1.33,3.A.1.35 Bacteria 1TSZZ@1239,4HB54@91061,COG0561@1,COG0561@2,COG4696@1,COG4696@2 NA|NA|NA S hydrolases of the HAD superfamily IIAPBPCI_00063 264199.stu1724 1.5e-172 612.1 Bacilli ansA 3.5.1.1 ko:K01424 ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110 R00485 RC00010,RC02798 ko00000,ko00001,ko01000 Bacteria 1TPP9@1239,4H9YJ@91061,COG0252@1,COG0252@2 NA|NA|NA EJ COG0252 L-asparaginase archaeal Glu-tRNAGln amidotransferase subunit D IIAPBPCI_00064 322159.STER_1700 0.0 1315.1 Bacilli recG GO:0003674,GO:0003678,GO:0003724,GO:0003824,GO:0004003,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006725,GO:0006807,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0008186,GO:0009314,GO:0009379,GO:0009628,GO:0009987,GO:0010501,GO:0016020,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032392,GO:0032508,GO:0032991,GO:0033202,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048476,GO:0050896,GO:0051276,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0140097,GO:0140098,GO:1901360,GO:1902494 3.6.4.12 ko:K03655 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Bacteria 1TQ6I@1239,4HAWN@91061,COG1200@1,COG1200@2 NA|NA|NA L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) IIAPBPCI_00065 322159.STER_1701 1.8e-185 655.2 Bacilli alr 5.1.1.1,5.1.1.5 ko:K01775,ko:K20707 ko00473,ko01100,ko01502,map00473,map01100,map01502 R00401 RC00285 ko00000,ko00001,ko01000,ko01011 Bacteria 1TNYY@1239,4HA95@91061,COG0787@1,COG0787@2 NA|NA|NA E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids IIAPBPCI_00066 322159.STER_1702 3.1e-62 244.2 Bacilli acpS 2.7.6.3,2.7.8.7,5.1.1.1 ko:K00950,ko:K00997,ko:K01775 ko00473,ko00770,ko00790,ko01100,ko01502,map00473,map00770,map00790,map01100,map01502 M00126,M00841 R00401,R01625,R03503 RC00002,RC00017,RC00285 ko00000,ko00001,ko00002,ko01000,ko01011 iYO844.BSU04620 Bacteria 1VA0T@1239,4HKBI@91061,COG0736@1,COG0736@2 NA|NA|NA I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein IIAPBPCI_00067 322159.STER_1703 2.5e-197 694.5 Firmicutes aroF 2.5.1.54 ko:K01626 ko00400,ko01100,ko01110,ko01130,ko01230,ko02024,map00400,map01100,map01110,map01130,map01230,map02024 M00022 R01826 RC00435 ko00000,ko00001,ko00002,ko01000 iHN637.CLJU_RS07240 Bacteria 1TQI4@1239,COG0722@1,COG0722@2 NA|NA|NA E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) IIAPBPCI_00068 322159.STER_1704 3.8e-198 697.2 Firmicutes aroF 2.5.1.54 ko:K01626 ko00400,ko01100,ko01110,ko01130,ko01230,ko02024,map00400,map01100,map01110,map01130,map01230,map02024 M00022 R01826 RC00435 ko00000,ko00001,ko00002,ko01000 iHN637.CLJU_RS07240 Bacteria 1TQI4@1239,COG0722@1,COG0722@2 NA|NA|NA E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) IIAPBPCI_00069 264199.stu1730 0.0 1654.8 Bacilli secA GO:0000166,GO:0002790,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0009306,GO:0009987,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032940,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 ko:K03070 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 ko00000,ko00001,ko00002,ko02044 3.A.5.1,3.A.5.10,3.A.5.2,3.A.5.4 Bacteria 1TPEY@1239,4HA22@91061,COG0653@1,COG0653@2 NA|NA|NA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane IIAPBPCI_00071 264199.stu1732 6.7e-189 666.4 Bacilli manA 5.3.1.8 ko:K01809 ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130 M00114 R01819 RC00376 ko00000,ko00001,ko00002,ko01000 Bacteria 1VRGI@1239,4HBFW@91061,COG1482@1,COG1482@2 NA|NA|NA G mannose-6-phosphate isomerase IIAPBPCI_00072 264199.stu1733 9.1e-172 609.4 Bacilli scrK 2.7.1.2,2.7.1.4 ko:K00845,ko:K00847 ko00010,ko00051,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00051,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200 M00001,M00549 R00299,R00760,R00867,R01600,R01786,R03920 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 Bacteria 1TQU4@1239,4HA1C@91061,COG1940@1,COG1940@2 NA|NA|NA GK Fructokinase IIAPBPCI_00073 322159.STER_1710 0.0 1201.4 Bacilli scrA 2.7.1.211 ko:K02808,ko:K02809,ko:K02810 ko00500,ko02060,map00500,map02060 M00269 R00811 RC00017,RC03206 ko00000,ko00001,ko00002,ko01000,ko02000 4.A.1.2.1,4.A.1.2.10,4.A.1.2.12,4.A.1.2.9 Bacteria 1TP5X@1239,4HA0I@91061,COG1263@1,COG1263@2,COG1264@1,COG1264@2,COG2190@1,COG2190@2 NA|NA|NA G pts system IIAPBPCI_00074 322159.STER_1711 2.3e-289 1000.7 Bacilli scrB 3.2.1.26 ko:K01193 ko00052,ko00500,ko01100,map00052,map00500,map01100 R00801,R00802,R02410,R03635,R03921,R06088 RC00028,RC00077 ko00000,ko00001,ko01000 GH32 Bacteria 1TPAE@1239,4H9Y7@91061,COG1621@1,COG1621@2 NA|NA|NA G invertase IIAPBPCI_00075 322159.STER_1712 9.2e-178 629.4 Bacilli scrR ko:K02529,ko:K03484 ko00000,ko03000 Bacteria 1TQ7K@1239,4H9V1@91061,COG1609@1,COG1609@2 NA|NA|NA K Transcriptional IIAPBPCI_00076 264199.stu1738 3.6e-73 280.8 Bacilli nusB ko:K03625 ko00000,ko03009,ko03021 Bacteria 1VA9B@1239,4HKMU@91061,COG0781@1,COG0781@2 NA|NA|NA K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons IIAPBPCI_00077 322159.STER_1714 3.4e-62 244.2 Bacilli yqhY ko:K10947 ko00000,ko03000 Bacteria 1V4IC@1239,4HJ7T@91061,COG1302@1,COG1302@2 NA|NA|NA S protein conserved in bacteria IIAPBPCI_00078 264199.stu1740 9.3e-98 362.8 Bacilli efp GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 ko:K02356 ko00000,ko03012 Bacteria 1TR8P@1239,4H9YX@91061,COG0231@1,COG0231@2 NA|NA|NA J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase IIAPBPCI_00079 264199.stu1741 1.1e-83 315.8 Bacilli comEB 3.5.4.12 ko:K01493 ko00240,ko01100,map00240,map01100 M00429 R01663 RC00074 ko00000,ko00001,ko00002,ko01000,ko02044 Bacteria 1V8V0@1239,4IQZA@91061,COG2131@1,COG2131@2 NA|NA|NA F ComE operon protein 2 IIAPBPCI_00080 264199.stu1742 7.2e-192 676.4 Bacilli pepP GO:0003674,GO:0003824,GO:0004177,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0016787,GO:0019538,GO:0043170,GO:0044238,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.11.9,3.4.13.9 ko:K01262,ko:K01271,ko:K08326 ko00000,ko01000,ko01002 Bacteria 1TQ44@1239,4HAT7@91061,COG0006@1,COG0006@2 NA|NA|NA E Belongs to the peptidase M24B family IIAPBPCI_00083 904306.HMPREF9192_0620 7.7e-11 72.4 Firmicutes ko:K01990 M00254 ko00000,ko00002,ko02000 3.A.1 Bacteria 1TPBQ@1239,COG1131@1,COG1131@2 NA|NA|NA V 'abc transporter, ATP-binding protein IIAPBPCI_00084 435842.HMPREF0848_01406 1.3e-58 232.3 Firmicutes ko:K01990 M00254 ko00000,ko00002,ko02000 3.A.1 Bacteria 1TPBQ@1239,COG1131@1,COG1131@2 NA|NA|NA V 'abc transporter, ATP-binding protein IIAPBPCI_00090 322159.STER_1722 0.0 1866.3 Bacilli uvrA ko:K03701 ko03420,map03420 ko00000,ko00001,ko03400 Bacteria 1TPIJ@1239,4HAW9@91061,COG0178@1,COG0178@2 NA|NA|NA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate IIAPBPCI_00091 264199.stu1749 5e-168 597.0 Bacilli corA ko:K03284 ko00000,ko02000 1.A.35.1,1.A.35.3 Bacteria 1TPI8@1239,4HE7S@91061,COG0598@1,COG0598@2 NA|NA|NA P COG0598 Mg2 and Co2 transporters IIAPBPCI_00092 322159.STER_1724 2e-123 448.4 Bacilli XK27_01040 Bacteria 1VF5N@1239,4HJMB@91061,COG4858@1,COG4858@2 NA|NA|NA S Pfam PF06570 IIAPBPCI_00094 264199.stu1752 9.7e-36 155.6 Bacilli rpsR GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0019538,GO:0022626,GO:0022627,GO:0030312,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02963,ko:K03111,ko:K15125 ko03010,ko03030,ko03430,ko03440,ko05133,map03010,map03030,map03430,map03440,map05133 M00178 br01610,ko00000,ko00001,ko00002,ko00536,ko03011,ko03029,ko03032,ko03400 Bacteria 1V9XS@1239,4HKCC@91061,COG0238@1,COG0238@2 NA|NA|NA J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit IIAPBPCI_00095 264199.stu1753 2.7e-91 341.3 Bacilli ssb ko:K03111 ko03030,ko03430,ko03440,map03030,map03430,map03440 ko00000,ko00001,ko03029,ko03032,ko03400 Bacteria 1V3WT@1239,4HH8I@91061,COG0629@1,COG0629@2 NA|NA|NA L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism IIAPBPCI_00096 264199.stu1754 3.9e-47 193.7 Bacilli rpsF GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0019843,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070181,GO:0097159,GO:1901363,GO:1990904 ko:K02990 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011,ko03029 Bacteria 1VA18@1239,4HKHD@91061,COG0360@1,COG0360@2 NA|NA|NA J Binds together with S18 to 16S ribosomal RNA IIAPBPCI_00097 996306.SSUR61_1077 2.1e-41 176.4 Streptococcus suis XK27_05745 Bacteria 1U8WY@1239,1WSBS@1307,2BJFN@1,32DS8@2,4IIVI@91061 NA|NA|NA IIAPBPCI_00099 264199.stu1757 3.6e-229 800.4 Bacilli mutY ko:K03575 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Bacteria 1TPUT@1239,4H9UM@91061,COG1194@1,COG1194@2 NA|NA|NA L A G-specific adenine glycosylase IIAPBPCI_00103 322159.STER_1736 0.0 1711.8 Bacilli polA GO:0003674,GO:0003824,GO:0003887,GO:0004518,GO:0004527,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008409,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0018130,GO:0019438,GO:0030312,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0040007,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0071944,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901362,GO:1901576 2.7.7.7 ko:K02335 ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko01000,ko03032,ko03400 Bacteria 1TPKJ@1239,4H9S7@91061,COG0258@1,COG0258@2,COG0749@1,COG0749@2 NA|NA|NA L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity IIAPBPCI_00104 322159.STER_1737 0.0 1454.5 Bacilli mutS2 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 ko:K07456 ko03430,map03430 ko00000,ko00001,ko03400 Bacteria 1TP5W@1239,4H9NZ@91061,COG1193@1,COG1193@2 NA|NA|NA L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity IIAPBPCI_00105 322159.STER_1738 6.7e-93 346.7 Bacteria cvpA GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008152,GO:0009058,GO:0009403,GO:0009404,GO:0009987,GO:0016020,GO:0019748,GO:0044237,GO:0044249,GO:0044464,GO:0044550,GO:0071944 ko:K03558 ko00000 Bacteria COG1286@1,COG1286@2 NA|NA|NA S toxin biosynthetic process IIAPBPCI_00106 1302863.I872_01550 2.3e-13 81.3 Bacilli zapA GO:0000003,GO:0000278,GO:0000281,GO:0000910,GO:0000917,GO:0000921,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006996,GO:0007010,GO:0007049,GO:0008150,GO:0009987,GO:0016043,GO:0019954,GO:0022402,GO:0022414,GO:0022607,GO:0030428,GO:0031106,GO:0032153,GO:0032185,GO:0032505,GO:0032506,GO:0034622,GO:0042802,GO:0043093,GO:0043933,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0051301,GO:0061640,GO:0065003,GO:0070925,GO:0071840,GO:0090529,GO:1902410,GO:1903047 ko:K09888 ko00000,ko03036 Bacteria 1VFZS@1239,4HP4T@91061,COG3027@1,COG3027@2 NA|NA|NA D Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division IIAPBPCI_00107 862969.SCI_0200 4e-163 581.3 Streptococcus anginosus group Bacteria 1V8H0@1239,2AQ9M@1,31FFI@2,42EJB@671232,4ISNC@91061 NA|NA|NA S Uncharacterised protein family (UPF0236) IIAPBPCI_00108 888049.HMPREF8578_0789 2.9e-07 60.8 Streptococcus oralis Bacteria 1TX3Q@1239,1WQ84@1303,2DJ5I@1,304SI@2,4I5ZW@91061 NA|NA|NA IIAPBPCI_00109 1069533.Sinf_1782 3.6e-111 407.9 Bacilli ko:K03496 ko00000,ko03036,ko04812 Bacteria 1V6Q6@1239,4HINH@91061,COG1192@1,COG1192@2 NA|NA|NA D CobQ CobB MinD ParA nucleotide binding domain protein IIAPBPCI_00110 1035184.HMPREF1042_2326 3.5e-71 274.6 Streptococcus anginosus group tnpR Bacteria 1UZM8@1239,42EG7@671232,4IQ67@91061,COG1961@1,COG1961@2 NA|NA|NA L Resolvase, N terminal domain IIAPBPCI_00111 862969.SCI_0195 3.3e-260 904.0 Streptococcus anginosus group Bacteria 1V2SB@1239,42E61@671232,4HFEX@91061,COG3843@1,COG3843@2 NA|NA|NA U Relaxase/Mobilisation nuclease domain IIAPBPCI_00112 1035184.HMPREF1042_2332 1.4e-44 185.7 Streptococcus anginosus group Bacteria 1TTW0@1239,29Y89@1,30K1Z@2,42EHW@671232,4I3RM@91061 NA|NA|NA S Bacterial mobilisation protein (MobC) IIAPBPCI_00114 873447.SPB_0386 0.0 1209.5 Bacilli Bacteria 1TQN4@1239,4HN8F@91061,COG0358@1,COG0358@2,COG4227@1,COG4227@2 NA|NA|NA L Psort location Cytoplasmic, score IIAPBPCI_00115 873447.SPB_0385 8.5e-275 952.6 Bacilli topB 5.99.1.2 ko:K03169 ko00000,ko01000,ko03032 Bacteria 1TPJD@1239,4HAZV@91061,COG0550@1,COG0550@2 NA|NA|NA L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone IIAPBPCI_00116 1302863.I872_03935 1.6e-07 62.4 Bacilli Bacteria 1W0V8@1239,2DYZ5@1,34BUX@2,4HYKI@91061 NA|NA|NA IIAPBPCI_00117 862969.SCI_0190 2.6e-311 1073.9 Streptococcus anginosus group ko:K03205 ko03070,map03070 M00333 ko00000,ko00001,ko00002,ko02044 3.A.7 Bacteria 1TPCF@1239,42E83@671232,4HF20@91061,COG3505@1,COG3505@2 NA|NA|NA U Type IV secretory system Conjugative DNA transfer IIAPBPCI_00118 1035184.HMPREF1042_2339 4.7e-62 244.2 Streptococcus anginosus group Bacteria 1VIW8@1239,2EDAG@1,3376W@2,42EGT@671232,4HQS8@91061 NA|NA|NA IIAPBPCI_00119 1035184.HMPREF1042_2340 1.8e-28 133.3 Streptococcus anginosus group ko:K06236 ko04151,ko04510,ko04512,ko04611,ko04926,ko04933,ko04974,ko05146,ko05165,map04151,map04510,map04512,map04611,map04926,map04933,map04974,map05146,map05165 ko00000,ko00001,ko00536,ko04516 Bacteria 1UMUJ@1239,42EFA@671232,4IU0F@91061,COG3468@1,COG3468@2 NA|NA|NA MU outer membrane autotransporter barrel domain protein IIAPBPCI_00120 1035184.HMPREF1042_2341 7.9e-65 254.2 Streptococcus anginosus group Bacteria 1TW0G@1239,2DIU0@1,3044E@2,42EHD@671232,4I4P6@91061 NA|NA|NA IIAPBPCI_00122 862969.SCI_0185 3.7e-64 251.5 Bacilli Bacteria 1VDM9@1239,2DNFF@1,32X8K@2,4HNCS@91061 NA|NA|NA IIAPBPCI_00123 873447.SPB_0377 0.0 1199.1 Bacilli Bacteria 1VPFZ@1239,4HFGV@91061,COG3942@1,COG3942@2 NA|NA|NA M CHAP domain protein IIAPBPCI_00124 1035184.HMPREF1042_2347 0.0 1381.3 Bacilli Bacteria 1TPDR@1239,4HC47@91061,COG3451@1,COG3451@2 NA|NA|NA U Psort location Cytoplasmic, score IIAPBPCI_00125 888049.HMPREF8578_0773 1.5e-13 82.4 Streptococcus oralis Bacteria 1TX2K@1239,1WQ63@1303,2DJ50@1,304RM@2,4I5YJ@91061 NA|NA|NA S PrgI family protein IIAPBPCI_00127 1035184.HMPREF1042_2350 9.6e-103 379.8 Streptococcus anginosus group Bacteria 1VY42@1239,2EFFF@1,33986@2,42EEK@671232,4HMPN@91061 NA|NA|NA IIAPBPCI_00129 1035184.HMPREF1042_2352 1.4e-34 152.1 Bacteria Bacteria COG4443@1,COG4443@2 NA|NA|NA S Transcriptional Coactivator p15 (PC4) IIAPBPCI_00130 1035184.HMPREF1042_2353 2.2e-46 191.4 Streptococcus anginosus group Bacteria 1TW11@1239,2DIUA@1,3044T@2,42EI4@671232,4I4PX@91061 NA|NA|NA IIAPBPCI_00131 862969.SCI_0175 2.4e-103 382.1 Streptococcus anginosus group repA Bacteria 1VHQA@1239,2DP1C@1,3304N@2,42DYE@671232,4HPY6@91061 NA|NA|NA S Replication initiator protein A (RepA) N-terminus IIAPBPCI_00133 322159.STER_1740 4.7e-160 570.5 Bacilli rnhC GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 ko:K03470,ko:K03471 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 Bacteria 1TQBE@1239,4H9QR@91061,COG1039@1,COG1039@2 NA|NA|NA L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids IIAPBPCI_00134 264199.stu1766 1.9e-112 411.8 Bacilli lepB 3.4.21.89 ko:K03100 ko02024,ko03060,map02024,map03060 ko00000,ko00001,ko01000,ko01002 Bacteria 1V7H9@1239,4HJSP@91061,COG0681@1,COG0681@2 NA|NA|NA U Belongs to the peptidase S26 family IIAPBPCI_00135 264199.stu1767 0.0 1620.1 Bacilli recD2 3.1.11.5 ko:K03581 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Bacteria 1TPZH@1239,4HATQ@91061,COG0507@1,COG0507@2 NA|NA|NA L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity IIAPBPCI_00136 264199.stu1768 8.8e-48 196.1 Bacteria azlD Bacteria COG4392@1,COG4392@2 NA|NA|NA E branched-chain amino acid IIAPBPCI_00137 264199.stu1769 8.5e-117 426.4 Bacilli azlC Bacteria 1V64T@1239,4HH44@91061,COG1296@1,COG1296@2 NA|NA|NA E AzlC protein IIAPBPCI_00138 264199.stu1770 1.9e-186 658.3 Bacilli tsaD GO:0000287,GO:0000408,GO:0002949,GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005488,GO:0005506,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006508,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0019538,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0070011,GO:0070525,GO:0071704,GO:0090304,GO:0140030,GO:0140032,GO:0140096,GO:1901360,GO:1901564 2.3.1.234 ko:K01409,ko:K03070 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 R10648 RC00070,RC00416 ko00000,ko00001,ko00002,ko01000,ko02044,ko03016 3.A.5.1,3.A.5.10,3.A.5.2,3.A.5.4 Bacteria 1TQDR@1239,4HANB@91061,COG0533@1,COG0533@2 NA|NA|NA O Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction IIAPBPCI_00139 264199.stu1771 1.3e-73 282.3 Bacilli rimI 2.3.1.128 ko:K03789 ko00000,ko01000,ko03009 Bacteria 1V6KU@1239,4HP50@91061,COG0454@1,COG0456@2 NA|NA|NA K This enzyme acetylates the N-terminal alanine of ribosomal protein S18 IIAPBPCI_00140 322159.STER_1747 2.1e-120 438.3 Bacilli yeaZ GO:0002949,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006508,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0019538,GO:0034470,GO:0034641,GO:0034660,GO:0042802,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070011,GO:0070525,GO:0071704,GO:0090304,GO:0140096,GO:1901360,GO:1901564 2.3.1.234 ko:K01409,ko:K14742 R10648 RC00070,RC00416 ko00000,ko01000,ko03016 Bacteria 1V4YX@1239,4HHD7@91061,COG1214@1,COG1214@2 NA|NA|NA O COG1214, inactive homolog of metal-dependent proteases IIAPBPCI_00141 264199.stu1773 2.5e-33 147.5 Bacilli ykzG Bacteria 1VEI7@1239,4HNSK@91061,COG5503@1,COG5503@2 NA|NA|NA S Belongs to the UPF0356 family IIAPBPCI_00142 264199.stu1774 0.0 1109.0 Bacilli rnjA GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004527,GO:0004532,GO:0004534,GO:0004540,GO:0005488,GO:0005515,GO:0006139,GO:0006364,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008409,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016072,GO:0016787,GO:0016788,GO:0016796,GO:0016896,GO:0022613,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0042802,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0090503,GO:0140098,GO:1901360 ko:K12574 ko03018,map03018 ko00000,ko00001,ko01000,ko03019 Bacteria 1TQ9G@1239,4HAAP@91061,COG0595@1,COG0595@2 NA|NA|NA S An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay IIAPBPCI_00143 435842.HMPREF0848_01440 3.2e-41 174.5 Bacilli pscB Bacteria 1V8WM@1239,4HIMT@91061,COG3942@1,COG3942@2 NA|NA|NA M CHAP domain protein IIAPBPCI_00145 264199.stu1776 9.9e-263 912.1 Bacilli glnA 6.3.1.2 ko:K01915 ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727 R00253 RC00010,RC02798 ko00000,ko00001,ko01000,ko04147 Bacteria 1TNZA@1239,4HACE@91061,COG0174@1,COG0174@2 NA|NA|NA E glutamine synthetase IIAPBPCI_00146 322159.STER_1752 8.5e-63 246.1 Bacilli glnR GO:0003674,GO:0005488,GO:0005515,GO:0006082,GO:0006355,GO:0006520,GO:0006541,GO:0006542,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0016053,GO:0019219,GO:0019222,GO:0019752,GO:0031323,GO:0031326,GO:0042802,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1903506,GO:2000112,GO:2001141 ko:K03713,ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 M00439 ko00000,ko00001,ko00002,ko02000,ko03000 3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25 Bacteria 1V6JE@1239,4HKM6@91061,COG0789@1,COG0789@2 NA|NA|NA K Transcriptional regulator IIAPBPCI_00147 322159.STER_1753 1.3e-87 328.9 Bacilli Bacteria 1VAJG@1239,4HKDZ@91061,COG4129@1,COG4129@2 NA|NA|NA S Fusaric acid resistance protein-like IIAPBPCI_00148 904306.HMPREF9192_0265 1.5e-12 77.8 Bacteria Bacteria COG3464@1,COG3464@2 NA|NA|NA IIAPBPCI_00149 264199.stu1302 2.4e-30 137.5 Bacteria Bacteria COG3464@1,COG3464@2 NA|NA|NA IIAPBPCI_00150 322159.STER_1755 1.7e-221 775.0 Bacilli pgk GO:0001871,GO:0002020,GO:0003674,GO:0003824,GO:0004618,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009893,GO:0009986,GO:0009987,GO:0010468,GO:0010604,GO:0010628,GO:0010755,GO:0010756,GO:0010954,GO:0016052,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0017144,GO:0018130,GO:0019222,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0019899,GO:0030162,GO:0030193,GO:0030195,GO:0030246,GO:0030247,GO:0030312,GO:0031323,GO:0031325,GO:0032101,GO:0032102,GO:0032268,GO:0032270,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0043532,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0045862,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0048518,GO:0048519,GO:0048522,GO:0048583,GO:0048585,GO:0050789,GO:0050794,GO:0050818,GO:0050819,GO:0050878,GO:0051171,GO:0051173,GO:0051186,GO:0051188,GO:0051239,GO:0051241,GO:0051246,GO:0051247,GO:0051917,GO:0051919,GO:0055086,GO:0060255,GO:0061041,GO:0061045,GO:0065007,GO:0065008,GO:0070613,GO:0071704,GO:0071944,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0080090,GO:0080134,GO:0090407,GO:1900046,GO:1900047,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1903034,GO:1903035,GO:1903317,GO:1903319,GO:2001065 2.7.2.3,5.3.1.1 ko:K00927,ko:K01803 ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230 M00001,M00002,M00003,M00165,M00166,M00308,M00552 R01015,R01512 RC00002,RC00043,RC00423 ko00000,ko00001,ko00002,ko01000,ko04147 iSB619.SA_RS04145 Bacteria 1TP3H@1239,4H9R3@91061,COG0126@1,COG0126@2 NA|NA|NA F Belongs to the phosphoglycerate kinase family IIAPBPCI_00151 1046629.Ssal_00123 7.9e-41 172.6 Bacilli ko:K07491 ko00000 Bacteria 1V1CM@1239,4HBWU@91061,COG1943@1,COG1943@2 NA|NA|NA L COG1943 Transposase and inactivated derivatives IIAPBPCI_00152 322159.STER_1757 9.7e-43 179.1 Bacteria ko:K07483 ko00000 Bacteria COG2963@1,COG2963@2 NA|NA|NA L transposase activity IIAPBPCI_00153 322159.STER_0016 8.4e-18 96.3 Firmicutes ko:K07483 ko00000 Bacteria 1W68S@1239,COG2963@1,COG2963@2 NA|NA|NA L Transposase IIAPBPCI_00154 888048.HMPREF8577_0808 4.7e-102 377.9 Bacilli ko:K07497 ko00000 Bacteria 1TQQY@1239,4HC8M@91061,COG2801@1,COG2801@2 NA|NA|NA L Transposase and inactivated derivatives IIAPBPCI_00155 322159.STER_1413 4.1e-158 563.9 Bacilli ko:K07497 ko00000 Bacteria 1TU21@1239,4HDK4@91061,COG2801@1,COG2801@2 NA|NA|NA L COG2801 Transposase and inactivated derivatives IIAPBPCI_00156 264199.stu1788 9.3e-189 666.0 Bacilli gap GO:0000166,GO:0002020,GO:0003674,GO:0003824,GO:0004365,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006735,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009986,GO:0009987,GO:0016491,GO:0016620,GO:0016903,GO:0019362,GO:0019637,GO:0019674,GO:0019899,GO:0022610,GO:0034641,GO:0036094,GO:0043891,GO:0044237,GO:0044238,GO:0044281,GO:0044403,GO:0044406,GO:0044419,GO:0044424,GO:0044464,GO:0044650,GO:0046483,GO:0046496,GO:0048037,GO:0050662,GO:0051186,GO:0051287,GO:0051704,GO:0055086,GO:0055114,GO:0071704,GO:0072524,GO:0097159,GO:0140030,GO:0140032,GO:1901265,GO:1901360,GO:1901363,GO:1901564 1.2.1.12 ko:K00134 ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010 M00001,M00002,M00003,M00165,M00166,M00308,M00552 R01061 RC00149 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Bacteria 1TNYU@1239,4H9NS@91061,COG0057@1,COG0057@2 NA|NA|NA G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family IIAPBPCI_00157 264199.stu1789 0.0 1360.5 Bacilli fusA GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0019538,GO:0030312,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 ko:K02355 ko00000,ko03012,ko03029 Bacteria 1TPF9@1239,4HAB8@91061,COG0480@1,COG0480@2 NA|NA|NA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome IIAPBPCI_00158 1046629.Ssal_00227 4.3e-80 303.9 Bacilli rpsG GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006417,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015935,GO:0016020,GO:0016043,GO:0017148,GO:0019222,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030312,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065003,GO:0065007,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0080090,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904,GO:2000112,GO:2000113 ko:K02992 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1V1GG@1239,4H9PA@91061,COG0049@1,COG0049@2 NA|NA|NA J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA IIAPBPCI_00159 1046629.Ssal_00226 5.1e-69 266.9 Bacilli rpsL GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02950 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1V1FJ@1239,4HFMZ@91061,COG0048@1,COG0048@2 NA|NA|NA J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit IIAPBPCI_00160 322159.STER_1765 7e-142 510.0 Bacilli purR 2.4.2.7 ko:K00759,ko:K09685 ko00230,ko01100,map00230,map01100 R00190,R01229,R04378 RC00063 ko00000,ko00001,ko01000,ko03000,ko04147 Bacteria 1TPN9@1239,4HB8I@91061,COG0503@1,COG0503@2 NA|NA|NA F operon repressor IIAPBPCI_00161 264199.stu1794 3.6e-179 634.0 Bacilli cbf ko:K03698 ko00000,ko01000,ko03019 Bacteria 1TPIU@1239,4HB1M@91061,COG3481@1,COG3481@2 NA|NA|NA S 3'-5' exoribonuclease yhaM IIAPBPCI_00162 264199.stu1795 4.5e-172 610.9 Bacilli rmuC ko:K09760 ko00000 Bacteria 1TPWI@1239,4HE2N@91061,COG1322@1,COG1322@2 NA|NA|NA S RmuC domain protein IIAPBPCI_00163 264199.stu1796 9.2e-118 429.5 Bacilli thiN 2.7.6.2 ko:K00949 ko00730,ko01100,map00730,map01100 R00619 RC00002,RC00017 ko00000,ko00001,ko01000 Bacteria 1VA0W@1239,4HHS1@91061,COG1564@1,COG1564@2 NA|NA|NA H thiamine pyrophosphokinase IIAPBPCI_00164 264199.stu1797 1.1e-118 432.6 Bacilli rpe 5.1.3.1 ko:K01783 ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230 M00004,M00007 R01529 RC00540 ko00000,ko00001,ko00002,ko01000 Bacteria 1TQK8@1239,4H9RW@91061,COG0036@1,COG0036@2 NA|NA|NA G Belongs to the ribulose-phosphate 3-epimerase family IIAPBPCI_00165 264199.stu1798 1.3e-162 578.9 Bacilli rsgA 3.1.3.100 ko:K06949 ko00730,ko01100,map00730,map01100 R00615,R02135 RC00002,RC00017 ko00000,ko00001,ko01000,ko03009 Bacteria 1TPSQ@1239,4HA9W@91061,COG1162@1,COG1162@2 NA|NA|NA G One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit IIAPBPCI_00167 264199.stu1799 8.9e-156 556.2 Bacilli ksgA GO:0000154,GO:0000179,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.182 ko:K02528 R10716 RC00003,RC03257 ko00000,ko01000,ko03009 Bacteria 1TP9W@1239,4HA4R@91061,COG0030@1,COG0030@2 NA|NA|NA J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits IIAPBPCI_00168 322159.STER_1773 3.2e-98 364.4 Bacilli rnmV GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0022613,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043822,GO:0044085,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360 3.1.26.8 ko:K05985,ko:K07476 ko00000,ko01000 Bacteria 1V3K3@1239,4HH5Y@91061,COG1658@1,COG1658@2 NA|NA|NA J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step IIAPBPCI_00169 264199.stu1801 4.1e-144 517.3 Bacilli tatD GO:0003674,GO:0003824,GO:0004518,GO:0004536,GO:0006139,GO:0006259,GO:0006308,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016787,GO:0016788,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901361,GO:1901575 ko:K03424 ko00000,ko01000 Bacteria 1TNY1@1239,4HA74@91061,COG0084@1,COG0084@2 NA|NA|NA L Hydrolase, tatd IIAPBPCI_00170 264199.stu1802 1.9e-74 285.0 Bacilli yccU GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 ko:K06929 ko00000 Bacteria 1V7C7@1239,4HIZT@91061,COG1832@1,COG1832@2 NA|NA|NA S CoA-binding protein IIAPBPCI_00171 264199.stu1803 1.1e-50 205.7 Bacilli trxA ko:K03671 ko04621,ko05418,map04621,map05418 ko00000,ko00001,ko03110 Bacteria 1VA3Y@1239,4HKKX@91061,COG3118@1,COG3118@2 NA|NA|NA O Belongs to the thioredoxin family IIAPBPCI_00172 264199.stu1804 7.8e-143 513.1 Bacilli Bacteria 1TQSZ@1239,4HCXD@91061,COG2110@1,COG2110@2 NA|NA|NA S Macro domain protein IIAPBPCI_00173 435842.HMPREF0848_01462 2.8e-13 80.9 Bacilli ko:K07107 ko00000,ko01000 Bacteria 1VAGM@1239,4HIVC@91061,COG0824@1,COG0824@2 NA|NA|NA L thioesterase IIAPBPCI_00174 264199.stu1805 2.2e-54 218.0 Bacteria bta 1.8.1.8 ko:K03671,ko:K03672 ko04621,ko05418,map04621,map05418 ko00000,ko00001,ko01000,ko03110 Bacteria COG0526@1,COG0526@2 NA|NA|NA CO cell redox homeostasis IIAPBPCI_00175 322159.STER_0151 8.4e-232 809.3 Firmicutes ko:K07485 ko00000 Bacteria 1TQ93@1239,COG3464@1,COG3464@2 NA|NA|NA L Transposase IIAPBPCI_00179 322159.STER_1785 6.3e-226 789.6 Bacilli tgt GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0018130,GO:0019438,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046116,GO:0046483,GO:0055086,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.2.29 ko:K00773 R03789,R10209 RC00063 ko00000,ko01000,ko03016 Bacteria 1TNZ4@1239,4HCNM@91061,COG0343@1,COG0343@2 NA|NA|NA F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) IIAPBPCI_00180 264199.stu1807 1.1e-83 315.8 Bacilli ko:K07491 ko00000 Bacteria 1V1CM@1239,4HGN6@91061,COG1943@1,COG1943@2 NA|NA|NA L Transposase IIAPBPCI_00181 1123299.AUKZ01000036_gene1534 1e-13 81.6 Bacteria rpmH GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02914 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria COG0230@1,COG0230@2 NA|NA|NA J Ribosomal protein L34 IIAPBPCI_00183 264199.stu1809 3.2e-184 651.0 Bacilli jag ko:K06346 ko00000 Bacteria 1V3IN@1239,4HHHU@91061,COG1847@1,COG1847@2 NA|NA|NA S RNA-binding protein IIAPBPCI_00184 264199.stu1810 8.5e-141 506.5 Bacilli yidC ko:K03217 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 ko00000,ko00001,ko00002,ko02044,ko03029 2.A.9 Bacteria 1TQ0J@1239,4HB3J@91061,COG0706@1,COG0706@2 NA|NA|NA U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins IIAPBPCI_00185 264199.stu1811 1.3e-54 218.8 Bacilli rnpA GO:0000966,GO:0001682,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004526,GO:0004540,GO:0004549,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005655,GO:0005730,GO:0006139,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0030677,GO:0030681,GO:0031123,GO:0031404,GO:0031974,GO:0031981,GO:0032991,GO:0033204,GO:0034414,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0040007,GO:0042301,GO:0042779,GO:0042780,GO:0042781,GO:0043167,GO:0043168,GO:0043170,GO:0043199,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043628,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044452,GO:0044464,GO:0046483,GO:0070013,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0099116,GO:0140098,GO:0140101,GO:1901360,GO:1901363,GO:1901681,GO:1902494,GO:1902555,GO:1905267,GO:1905348,GO:1990904 3.1.26.5 ko:K03536,ko:K08998 ko00000,ko01000,ko03016 Bacteria 1VA78@1239,4HKG6@91061,COG0594@1,COG0594@2 NA|NA|NA J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme IIAPBPCI_00186 264199.stu1812 1.2e-263 915.2 Bacilli argH GO:0003674,GO:0003824,GO:0004056,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016829,GO:0016840,GO:0016842,GO:0019752,GO:0042450,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.3.2.1 ko:K01755 ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,map00220,map00250,map01100,map01110,map01130,map01230 M00029,M00844,M00845 R01086 RC00445,RC00447 ko00000,ko00001,ko00002,ko01000,ko04147 Bacteria 1TNZ6@1239,4HB24@91061,COG0165@1,COG0165@2 NA|NA|NA E Argininosuccinate lyase IIAPBPCI_00187 264199.stu1813 2.9e-229 800.8 Bacilli argG GO:0000050,GO:0000053,GO:0003674,GO:0003824,GO:0004055,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006575,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0019627,GO:0019752,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:0072350,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.4.5 ko:K01940 ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,ko05418,map00220,map00250,map01100,map01110,map01130,map01230,map05418 M00029,M00844,M00845 R01954 RC00380,RC00629 ko00000,ko00001,ko00002,ko01000,ko04147 iJN678.argG,iSB619.SA_RS04675 Bacteria 1TP3X@1239,4HA1E@91061,COG0137@1,COG0137@2 NA|NA|NA E Belongs to the argininosuccinate synthase family. Type 1 subfamily IIAPBPCI_00188 264199.stu1814 1.5e-280 971.5 Bacilli gltX GO:0001871,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009986,GO:0030246,GO:0030247,GO:0044424,GO:0044464,GO:2001065 6.1.1.17,6.1.1.24 ko:K01885,ko:K09698 ko00860,ko00970,ko01100,ko01110,ko01120,map00860,map00970,map01100,map01110,map01120 M00121,M00359,M00360 R03651,R05578 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko02048,ko03016 iSB619.SA_RS02860 Bacteria 1TPJC@1239,4HAKH@91061,COG0008@1,COG0008@2 NA|NA|NA J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) IIAPBPCI_00189 264199.stu1815 1.6e-62 245.4 Bacteria amiA GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K02035,ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 M00239,M00439 ko00000,ko00001,ko00002,ko02000 3.A.1.5,3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25 Bacteria COG4166@1,COG4166@2 NA|NA|NA E transmembrane transport IIAPBPCI_00190 904306.HMPREF9192_2056 1.5e-181 642.1 Bacilli amiA GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 M00439 ko00000,ko00001,ko00002,ko02000 3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25 Bacteria 1TQVS@1239,4HCCB@91061,COG4166@1,COG4166@2 NA|NA|NA E ABC transporter, substrate-binding protein, family 5 IIAPBPCI_00191 264199.stu1817 1.8e-119 435.3 Bacilli rplA GO:0000027,GO:0000470,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006417,GO:0006446,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015934,GO:0016020,GO:0016043,GO:0016070,GO:0016072,GO:0017148,GO:0019222,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0030312,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045947,GO:0046483,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065003,GO:0065007,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0080090,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904,GO:2000112,GO:2000113 ko:K02863 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1TPTS@1239,4HAK4@91061,COG0081@1,COG0081@2 NA|NA|NA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release IIAPBPCI_00192 264199.stu1818 3.7e-70 270.8 Bacilli rplK GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0006950,GO:0006996,GO:0007154,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009267,GO:0009605,GO:0009987,GO:0009991,GO:0010467,GO:0015934,GO:0015968,GO:0016043,GO:0019538,GO:0019843,GO:0022411,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0030312,GO:0031667,GO:0031668,GO:0031669,GO:0032984,GO:0032991,GO:0033554,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0042594,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050896,GO:0051716,GO:0065003,GO:0070925,GO:0071496,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02867 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1V1BS@1239,4HFQ0@91061,COG0080@1,COG0080@2 NA|NA|NA J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors IIAPBPCI_00193 264199.stu1819 3.5e-50 204.1 Firmicutes Bacteria 1VNK9@1239,2DSU9@1,33HF9@2 NA|NA|NA S Protein of unknown function (DUF3397) IIAPBPCI_00194 264199.stu1820 2e-88 331.6 Bacilli cah 4.2.1.1 ko:K01673 ko00910,map00910 R00132,R10092 RC02807 ko00000,ko00001,ko01000 Bacteria 1V0TA@1239,4HB9V@91061,COG0288@1,COG0288@2 NA|NA|NA P Reversible hydration of carbon dioxide IIAPBPCI_00195 904306.HMPREF9192_2050 9.1e-29 132.5 Bacilli WQ51_05710 Bacteria 1V6BD@1239,4HIAR@91061,COG2013@1,COG2013@2 NA|NA|NA S Mitochondrial biogenesis AIM24 IIAPBPCI_00196 264199.stu1822 3e-34 150.6 Bacteria WQ51_05710 Bacteria COG2013@1,COG2013@2 NA|NA|NA S Mitochondrial biogenesis AIM24 IIAPBPCI_00197 435842.HMPREF0848_01845 1.4e-11 74.3 Bacilli WQ51_05710 Bacteria 1V6BD@1239,4HIAR@91061,COG2013@1,COG2013@2 NA|NA|NA S Mitochondrial biogenesis AIM24 IIAPBPCI_00198 264199.stu1823 1.4e-226 792.0 Bacilli radA ko:K04485 ko00000,ko03400 Bacteria 1TQ7Y@1239,4H9YC@91061,COG1066@1,COG1066@2 NA|NA|NA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function IIAPBPCI_00199 264199.stu1824 1.1e-80 305.8 Bacilli dut GO:0000287,GO:0003674,GO:0003824,GO:0004170,GO:0005488,GO:0006139,GO:0006220,GO:0006221,GO:0006226,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009141,GO:0009143,GO:0009147,GO:0009149,GO:0009157,GO:0009162,GO:0009165,GO:0009166,GO:0009176,GO:0009177,GO:0009200,GO:0009204,GO:0009211,GO:0009213,GO:0009219,GO:0009221,GO:0009223,GO:0009262,GO:0009263,GO:0009264,GO:0009265,GO:0009394,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046078,GO:0046080,GO:0046081,GO:0046385,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0047429,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0072529,GO:0090407,GO:1901135,GO:1901136,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.6.1.23,4.1.1.36,6.3.2.5 ko:K01520,ko:K13038 ko00240,ko00770,ko00983,ko01100,map00240,map00770,map00983,map01100 M00053,M00120 R02100,R03269,R04231,R11896 RC00002,RC00064,RC00090,RC00822 ko00000,ko00001,ko00002,ko01000,ko03400 Bacteria 1V6HX@1239,4HIZ3@91061,COG0756@1,COG0756@2 NA|NA|NA F This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA IIAPBPCI_00200 264199.stu1825 1.8e-19 100.9 Bacteria XK27_09620 Bacteria COG0431@1,COG0431@2 NA|NA|NA S FMN reductase (NADPH) activity IIAPBPCI_00201 1046629.Ssal_00181 4.6e-35 153.3 Bacteria XK27_09620 Bacteria COG0431@1,COG0431@2 NA|NA|NA S FMN reductase (NADPH) activity IIAPBPCI_00202 904306.HMPREF9192_2046 7.4e-220 769.6 Bacilli XK27_09615 Bacteria 1TPRA@1239,4HDA5@91061,COG0431@1,COG0431@2,COG2461@1,COG2461@2 NA|NA|NA C reductase IIAPBPCI_00203 435842.HMPREF0848_01839 6.2e-91 340.1 Bacilli fnt ko:K06212,ko:K21993 ko00000,ko02000 1.A.16.1.1,1.A.16.1.3,1.A.16.2 Bacteria 1V164@1239,4HFJC@91061,COG2116@1,COG2116@2 NA|NA|NA P Formate nitrite transporter IIAPBPCI_00204 1046629.Ssal_00177 3.5e-32 144.1 Bacteria XK27_08585 ko:K16926 M00582 ko00000,ko00002,ko02000 3.A.1.31 Bacteria 2BY0N@1,321KG@2 NA|NA|NA S Psort location CytoplasmicMembrane, score IIAPBPCI_00205 435842.HMPREF0848_01838 4.7e-29 133.3 Bacteria XK27_08585 ko:K16926 M00582 ko00000,ko00002,ko02000 3.A.1.31 Bacteria 2BY0N@1,321KG@2 NA|NA|NA S Psort location CytoplasmicMembrane, score IIAPBPCI_00206 264199.stu1832 4.4e-186 657.1 Bacilli gpsA GO:0003674,GO:0003824,GO:0004367,GO:0006072,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016491,GO:0016614,GO:0016616,GO:0019637,GO:0044237,GO:0046167,GO:0047952,GO:0052646,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901576 1.1.1.94 ko:K00057 ko00564,ko01110,map00564,map01110 R00842,R00844 RC00029 ko00000,ko00001,ko01000 Bacteria 1TQ5P@1239,4HAXW@91061,COG0240@1,COG0240@2 NA|NA|NA I Glycerol-3-phosphate dehydrogenase IIAPBPCI_00207 264199.stu1833 4.8e-168 597.0 Bacilli galU 2.7.7.9 ko:K00963 ko00040,ko00052,ko00500,ko00520,ko01100,ko01130,map00040,map00052,map00500,map00520,map01100,map01130 M00129,M00361,M00362,M00549 R00289 RC00002 ko00000,ko00001,ko00002,ko01000 Bacteria 1TQ24@1239,4HATY@91061,COG1210@1,COG1210@2 NA|NA|NA M UTP-glucose-1-phosphate uridylyltransferase IIAPBPCI_00208 264199.stu1836 2.6e-118 431.4 Bacilli gluP 3.4.21.105 ko:K19225 ko00000,ko01000,ko01002 Bacteria 1TQXT@1239,4HCDF@91061,COG0705@1,COG0705@2 NA|NA|NA O membrane protein (homolog of Drosophila rhomboid) IIAPBPCI_00209 264199.stu1837 1e-93 349.4 Bacilli ygfA GO:0003674,GO:0003824,GO:0006082,GO:0006575,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009396,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016882,GO:0018130,GO:0019438,GO:0019752,GO:0022611,GO:0030272,GO:0032502,GO:0034641,GO:0035999,GO:0042398,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0046653,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.3.2 ko:K01934 ko00670,ko01100,map00670,map01100 R02301 RC00183 ko00000,ko00001,ko01000 iECABU_c1320.ECABU_c31940,iECOK1_1307.ECOK1_3298,iECSF_1327.ECSF_2705,iUTI89_1310.UTI89_C3298 Bacteria 1VA91@1239,4HM35@91061,COG0212@1,COG0212@2 NA|NA|NA H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family IIAPBPCI_00210 264199.stu1838 1e-220 772.3 Bacilli hipO GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016787,GO:0016810,GO:0016811,GO:0019213,GO:0019752,GO:0019877,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046451,GO:0050118,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 3.5.1.47 ko:K01436,ko:K05823,ko:K21613 ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230 M00525 R02733 RC00064,RC00300 ko00000,ko00001,ko00002,ko01000,ko01002 Bacteria 1TPD7@1239,4H9SG@91061,COG1473@1,COG1473@2 NA|NA|NA E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate IIAPBPCI_00211 264199.stu1839 8.1e-59 233.8 Bacilli dapD GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008666,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009987,GO:0016053,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0016748,GO:0016749,GO:0019752,GO:0019877,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.117,2.3.1.89 ko:K00674,ko:K05822 ko00300,ko01100,ko01110,ko01120,ko01230,map00300,map01100,map01110,map01120,map01230 M00016,M00525 R04364,R04365 RC00004,RC01136 ko00000,ko00001,ko00002,ko01000 iSbBS512_1146.SbBS512_E0158,iYO844.BSU14180 Bacteria 1TQUJ@1239,4H9KY@91061,COG2171@1,COG2171@2 NA|NA|NA E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate IIAPBPCI_00212 264199.stu1840 7.8e-48 196.1 Bacteria ko:K07025 ko00000 Bacteria COG0546@1,COG0546@2 NA|NA|NA S glycolate biosynthetic process IIAPBPCI_00213 264199.stu1841 1.7e-63 248.4 Bacteria ko:K07025 ko00000 Bacteria COG1011@1,COG1011@2 NA|NA|NA S phosphatase activity IIAPBPCI_00214 322159.STER_1816 6.3e-159 566.6 Bacteria rrmA 2.1.1.187 ko:K00563,ko:K10947 R07233 RC00003 ko00000,ko01000,ko03000,ko03009 Bacteria COG0500@1,COG2226@2 NA|NA|NA Q methyltransferase IIAPBPCI_00217 322159.STER_1819 1.2e-91 342.4 Bacilli tadA 3.5.4.1,3.5.4.33 ko:K01485,ko:K11991 ko00240,ko00330,ko01100,map00240,map00330,map01100 R00974,R01411,R02922,R10223 RC00074,RC00477,RC00514,RC00809 ko00000,ko00001,ko01000,ko03016 Bacteria 1V3HZ@1239,4HH7S@91061,COG0590@1,COG0590@2 NA|NA|NA FJ Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) IIAPBPCI_00218 322159.STER_1821 5.1e-66 256.9 Bacilli ssb_2 ko:K03111 ko03030,ko03430,ko03440,map03030,map03430,map03440 ko00000,ko00001,ko03029,ko03032,ko03400 Bacteria 1VXMZ@1239,4HXCW@91061,COG0629@1,COG0629@2 NA|NA|NA L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism IIAPBPCI_00219 264199.stu1846 6.4e-37 159.5 Bacteria yeeD GO:0008150,GO:0009987,GO:0019725,GO:0042592,GO:0048878,GO:0055082,GO:0065007,GO:0065008 ko:K07112 ko00000 Bacteria COG0425@1,COG0425@2 NA|NA|NA O sulfur carrier activity IIAPBPCI_00220 264199.stu1847 2.8e-188 664.5 Bacilli yeeE GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K07112 ko00000 Bacteria 1TSNG@1239,4HDN0@91061,COG2391@1,COG2391@2 NA|NA|NA S Sulphur transport IIAPBPCI_00221 264199.stu1848 7.9e-114 416.4 Bacilli pheT GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 ko:K01890,ko:K06878 ko00970,map00970 M00359,M00360 R03660 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Bacteria 1V7QA@1239,4HJBD@91061,COG0073@1,COG0073@2 NA|NA|NA J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily IIAPBPCI_00222 264199.stu1849 4.2e-55 220.3 Bacilli ytpP GO:0003674,GO:0003824,GO:0004791,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0015035,GO:0015036,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0016671,GO:0019725,GO:0033554,GO:0034599,GO:0042221,GO:0042592,GO:0044424,GO:0044444,GO:0044464,GO:0045454,GO:0047134,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748 2.7.1.180,5.3.4.1 ko:K01829,ko:K03671,ko:K03734,ko:K06196 ko04621,ko05418,map04621,map05418 ko00000,ko00001,ko01000,ko02000,ko03110 5.A.1.2 Bacteria 1VAS6@1239,4HKGM@91061,COG0526@1,COG0526@2 NA|NA|NA CO Thioredoxin IIAPBPCI_00223 1035184.HMPREF1042_1989 1.8e-09 68.6 Streptococcus anginosus group Bacteria 1TVXJ@1239,2BV7J@1,32QM1@2,42EDG@671232,4I4JA@91061 NA|NA|NA S Domain of unknown function (DUF4651) IIAPBPCI_00224 322159.STER_1827 7.5e-205 719.5 Bacilli pepA 3.4.11.7 ko:K01261,ko:K01269 ko00000,ko01000,ko01002 Bacteria 1TNZT@1239,4H9SM@91061,COG1363@1,COG1363@2 NA|NA|NA G COG1363 Cellulase M and related proteins IIAPBPCI_00225 264199.stu1852 3.9e-131 474.2 Bacilli proC 1.5.1.2 ko:K00286 ko00330,ko01100,ko01110,ko01130,ko01230,map00330,map01100,map01110,map01130,map01230 M00015 R01248,R01251,R03291,R03293 RC00054,RC00083 ko00000,ko00001,ko00002,ko01000 Bacteria 1TP1E@1239,4HCBY@91061,COG0345@1,COG0345@2 NA|NA|NA E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline IIAPBPCI_00226 264199.stu1853 2.1e-109 401.7 Bacilli ko:K07052 ko00000 Bacteria 1VEE2@1239,4HP4A@91061,COG1266@1,COG1266@2 NA|NA|NA S CAAX amino terminal protease family protein IIAPBPCI_00228 264199.stu1855 1.4e-66 258.8 Bacteria ko:K07052 ko00000 Bacteria COG1266@1,COG1266@2 NA|NA|NA V CAAX protease self-immunity IIAPBPCI_00229 1046629.Ssal_00151 2.6e-26 124.0 Bacteria lanR ko:K07729 ko00000,ko03000 Bacteria COG1476@1,COG1476@2 NA|NA|NA K sequence-specific DNA binding IIAPBPCI_00230 264199.stu1857 3.2e-220 770.8 Bacilli ackA GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.7.2.1 ko:K00925 ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200 M00357,M00579 R00315,R01353 RC00002,RC00043 ko00000,ko00001,ko00002,ko01000 iNJ661.Rv0409 Bacteria 1TQ22@1239,4HA7K@91061,COG0282@1,COG0282@2 NA|NA|NA F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction IIAPBPCI_00231 264199.stu1858 4.2e-175 620.5 Bacilli ytxK 2.1.1.72 ko:K00571 ko00000,ko01000,ko02048 Bacteria 1TRIQ@1239,4H9SE@91061,COG0827@1,COG0827@2 NA|NA|NA L DNA methylase IIAPBPCI_00232 1198676.SMUGS5_08910 2.2e-11 75.1 Bacilli comGF ko:K02246,ko:K02248 M00429 ko00000,ko00002,ko02044 Bacteria 1VJKM@1239,4HQDT@91061,COG4940@1,COG4940@2 NA|NA|NA U Putative Competence protein ComGF IIAPBPCI_00233 322159.STER_1837 1.3e-70 272.3 Bacilli comGF ko:K02246,ko:K02248 M00429 ko00000,ko00002,ko02044 Bacteria 1VKRP@1239,4HR6S@91061,COG4940@1,COG4940@2 NA|NA|NA U Competence protein ComGF IIAPBPCI_00234 873449.STRCR_0577 4.1e-15 87.0 Firmicutes Bacteria 1W385@1239,2ZS6J@2,COG2165@1 NA|NA|NA NU Type II secretory pathway pseudopilin IIAPBPCI_00235 264199.stu1862 2.6e-56 224.6 Bacilli cglD ko:K02246 M00429 ko00000,ko00002,ko02044 Bacteria 1VPGT@1239,33A38@2,4HRZ0@91061,COG2165@1 NA|NA|NA NU Competence protein IIAPBPCI_00236 322159.STER_1840 2.5e-42 177.9 Bacilli comGC GO:0005575,GO:0005623,GO:0005886,GO:0009986,GO:0016020,GO:0044464,GO:0071944 ko:K02245,ko:K02456 ko03070,ko05111,map03070,map05111 M00331,M00429 ko00000,ko00001,ko00002,ko02044 3.A.15 Bacteria 1VFI9@1239,4HNNT@91061,COG4537@1,COG4537@2 NA|NA|NA U Required for transformation and DNA binding IIAPBPCI_00237 264199.stu1864 4.5e-152 543.9 Bacilli cglB ko:K02244 M00429 ko00000,ko00002,ko02044 3.A.14.1 Bacteria 1U00C@1239,4HGUA@91061,COG1459@1,COG1459@2 NA|NA|NA NU type II secretion system IIAPBPCI_00238 322159.STER_1842 2.2e-176 624.8 Bacilli comGA ko:K02243 M00429 ko00000,ko00002,ko02044 3.A.14.1 Bacteria 1TPGE@1239,4HB0C@91061,COG2804@1,COG2804@2 NA|NA|NA NU Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB IIAPBPCI_00239 264199.stu1866 2.7e-66 257.7 Bacilli Bacteria 1VHC7@1239,4HS15@91061,COG4699@1,COG4699@2 NA|NA|NA S cog cog4699 IIAPBPCI_00240 322159.STER_1844 0.0 2382.8 Bacilli rpoC GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 ko:K03046 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 M00183 R00435,R00441,R00442,R00443 RC02795 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 Bacteria 1TNYT@1239,4HA24@91061,COG0086@1,COG0086@2 NA|NA|NA K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates IIAPBPCI_00241 322159.STER_1845 0.0 2295.8 Bacilli rpoB GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 ko:K03043 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 M00183 R00435,R00441,R00442,R00443 RC02795 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 Bacteria 1TP96@1239,4H9PK@91061,COG0085@1,COG0085@2 NA|NA|NA K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates IIAPBPCI_00242 264199.stu1869 0.0 1562.7 Bacilli pbp1B 2.4.1.129,3.4.16.4 ko:K03693,ko:K05365,ko:K05366,ko:K05367,ko:K12551,ko:K12555,ko:K21464 ko00550,ko01100,ko01501,map00550,map01100,map01501 R04519 RC00005,RC00049 ko00000,ko00001,ko01000,ko01003,ko01011 GT51 Bacteria 1TPM5@1239,4H9SA@91061,COG0744@1,COG0744@2 NA|NA|NA M penicillin-binding protein IIAPBPCI_00243 264199.stu1870 2.1e-238 831.2 Bacilli tyrS GO:0003674,GO:0003824,GO:0004812,GO:0004831,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006437,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.1 ko:K01866 ko00970,map00970 M00359,M00360 R02918 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 iAF1260.b1637,iBWG_1329.BWG_1452,iECDH10B_1368.ECDH10B_1771,iECDH1ME8569_1439.ECDH1ME8569_1581,iECH74115_1262.ECH74115_2349,iECIAI39_1322.ECIAI39_1418,iECNA114_1301.ECNA114_1685,iECO103_1326.ECO103_1778,iECO111_1330.ECO111_2107,iECO26_1355.ECO26_2366,iECSE_1348.ECSE_1760,iECSF_1327.ECSF_1500,iECSP_1301.ECSP_2202,iECUMN_1333.ECUMN_1928,iECW_1372.ECW_m1805,iECs_1301.ECs2346,iEKO11_1354.EKO11_2137,iETEC_1333.ETEC_1672,iEcDH1_1363.EcDH1_2003,iEcE24377_1341.EcE24377A_1847,iEcHS_1320.EcHS_A1713,iEcSMS35_1347.EcSMS35_1562,iEcolC_1368.EcolC_1992,iJO1366.b1637,iSFV_1184.SFV_1654,iSF_1195.SF1662,iSSON_1240.SSON_1519,iSbBS512_1146.SbBS512_E1829,iUMNK88_1353.UMNK88_2097,iWFL_1372.ECW_m1805,iY75_1357.Y75_RS08585 Bacteria 1TPGN@1239,4H9YV@91061,COG0162@1,COG0162@2 NA|NA|NA J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) IIAPBPCI_00244 322159.STER_1848 1.6e-196 691.8 Bacilli ilvC 1.1.1.86 ko:K00053 ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230 M00019,M00570 R03051,R04439,R04440,R05068,R05069,R05071 RC00726,RC00836,RC00837,RC01726 ko00000,ko00001,ko00002,ko01000 Bacteria 1TPI7@1239,4HADK@91061,COG0059@1,COG0059@2 NA|NA|NA H Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate IIAPBPCI_00245 264199.stu1872 1.1e-75 289.3 Bacilli ilvN GO:0003674,GO:0003824,GO:0003984,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005948,GO:0006082,GO:0006520,GO:0006549,GO:0006573,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009097,GO:0009099,GO:0009987,GO:0016053,GO:0016740,GO:0016744,GO:0019752,GO:0032991,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494,GO:1990234 2.2.1.6 ko:K01653,ko:K16785 ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,ko02010,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230,map02010 M00019,M00570,M00582 R00006,R00014,R00226,R03050,R04672,R04673,R08648 RC00027,RC00106,RC01192,RC02744,RC02893 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.25,3.A.1.28,3.A.1.29,3.A.1.30,3.A.1.31,3.A.1.32,3.A.1.33,3.A.1.35 Bacteria 1V2AJ@1239,4HDY5@91061,COG0440@1,COG0440@2 NA|NA|NA E Acetolactate synthase IIAPBPCI_00246 264199.stu1873 0.0 1104.4 Bacilli ilvB 2.2.1.6 ko:K01652,ko:K16787 ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,ko02010,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230,map02010 M00019,M00570,M00582 R00006,R00014,R00226,R03050,R04672,R04673,R08648 RC00027,RC00106,RC01192,RC02744,RC02893 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.25,3.A.1.28,3.A.1.29,3.A.1.30,3.A.1.31,3.A.1.32,3.A.1.33,3.A.1.35 iYO844.BSU28310 Bacteria 1TQE8@1239,4H9VR@91061,COG0028@1,COG0028@2 NA|NA|NA EH Acetolactate synthase IIAPBPCI_00247 904306.HMPREF9192_2000 0.0 1124.0 Bacilli ilvD 4.2.1.9 ko:K01687,ko:K16786 ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,ko02010,map00290,map00770,map01100,map01110,map01130,map01210,map01230,map02010 M00019,M00570,M00582 R01209,R04441,R05070 RC00468,RC01714 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.25,3.A.1.28,3.A.1.29,3.A.1.30,3.A.1.31,3.A.1.32,3.A.1.33,3.A.1.35 iAF987.Gmet_1259 Bacteria 1TP1R@1239,4H9ZG@91061,COG0129@1,COG0129@2 NA|NA|NA E Belongs to the IlvD Edd family IIAPBPCI_00248 264199.stu1875 6.7e-301 1039.3 Bacilli yloV ko:K07030 ko00000 Bacteria 1TQMX@1239,4HBSE@91061,COG1461@1,COG1461@2 NA|NA|NA S kinase related to dihydroxyacetone kinase IIAPBPCI_00249 322159.STER_1855 1.8e-57 228.4 Bacilli asp Bacteria 1V3Q6@1239,4HHYJ@91061,COG1302@1,COG1302@2 NA|NA|NA S cog cog1302 IIAPBPCI_00250 322159.STER_1856 2.7e-225 787.7 Bacilli norN ko:K03327 ko00000,ko02000 2.A.66.1 Bacteria 1TQMT@1239,4H9Y2@91061,COG0534@1,COG0534@2 NA|NA|NA V Mate efflux family protein IIAPBPCI_00251 322159.STER_1857 1.9e-278 964.5 Bacilli thrC 4.2.3.1 ko:K01733 ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230 M00018 R01466,R05086 RC00017,RC00526 ko00000,ko00001,ko00002,ko01000 iHN637.CLJU_RS16355,iIT341.HP0098 Bacteria 1TPR0@1239,4H9R7@91061,COG0498@1,COG0498@2 NA|NA|NA E Threonine synthase IIAPBPCI_00252 904306.HMPREF9192_1994 2.6e-39 167.5 Bacilli adhE 1.1.1.1,1.2.1.10 ko:K04072 ko00010,ko00071,ko00350,ko00620,ko00625,ko00626,ko00650,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00620,map00625,map00626,map00650,map01100,map01110,map01120,map01130,map01220 R00228,R00623,R00754,R01172,R04880,R05233,R05234,R06917,R06927 RC00004,RC00050,RC00088,RC00099,RC00116,RC00184,RC00649,RC01195 ko00000,ko00001,ko01000 iSB619.SA_RS00885 Bacteria 1TPB4@1239,4HAN8@91061,COG1012@1,COG1012@2,COG1454@1,COG1454@2 NA|NA|NA C belongs to the iron- containing alcohol dehydrogenase family IIAPBPCI_00253 264199.stu1881 2.3e-66 258.1 Bacilli adhE 1.1.1.1,1.2.1.10 ko:K04072 ko00010,ko00071,ko00350,ko00620,ko00625,ko00626,ko00650,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00620,map00625,map00626,map00650,map01100,map01110,map01120,map01130,map01220 R00228,R00623,R00754,R01172,R04880,R05233,R05234,R06917,R06927 RC00004,RC00050,RC00088,RC00099,RC00116,RC00184,RC00649,RC01195 ko00000,ko00001,ko01000 iSB619.SA_RS00885 Bacteria 1TPB4@1239,4HAN8@91061,COG1454@1,COG1454@2 NA|NA|NA C belongs to the iron- containing alcohol dehydrogenase family IIAPBPCI_00254 904306.HMPREF9192_1994 1.9e-156 558.5 Bacilli adhE 1.1.1.1,1.2.1.10 ko:K04072 ko00010,ko00071,ko00350,ko00620,ko00625,ko00626,ko00650,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00620,map00625,map00626,map00650,map01100,map01110,map01120,map01130,map01220 R00228,R00623,R00754,R01172,R04880,R05233,R05234,R06917,R06927 RC00004,RC00050,RC00088,RC00099,RC00116,RC00184,RC00649,RC01195 ko00000,ko00001,ko01000 iSB619.SA_RS00885 Bacteria 1TPB4@1239,4HAN8@91061,COG1012@1,COG1012@2,COG1454@1,COG1454@2 NA|NA|NA C belongs to the iron- containing alcohol dehydrogenase family IIAPBPCI_00255 264199.stu1884 1.8e-63 248.4 Bacilli adhE 1.1.1.1,1.2.1.10 ko:K04072 ko00010,ko00071,ko00350,ko00620,ko00625,ko00626,ko00650,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00620,map00625,map00626,map00650,map01100,map01110,map01120,map01130,map01220 R00228,R00623,R00754,R01172,R04880,R05233,R05234,R06917,R06927 RC00004,RC00050,RC00088,RC00099,RC00116,RC00184,RC00649,RC01195 ko00000,ko00001,ko01000 iSB619.SA_RS00885 Bacteria 1UHQT@1239,4IS6J@91061,COG1012@1,COG1012@2 NA|NA|NA C Dehydrogenase IIAPBPCI_00256 322159.STER_1860 0.0 1288.1 Bacilli pepO 3.4.24.71 ko:K01415,ko:K07386 ko00000,ko01000,ko01002,ko04147 Bacteria 1TQTA@1239,4HDSF@91061,COG3590@1,COG3590@2 NA|NA|NA O Peptidase family M13 IIAPBPCI_00257 264199.stu1886 1.4e-114 419.1 Bacilli treC GO:0003674,GO:0003824,GO:0004553,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005984,GO:0005991,GO:0005993,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008788,GO:0009056,GO:0009311,GO:0009313,GO:0009987,GO:0015927,GO:0016052,GO:0016787,GO:0016798,GO:0033554,GO:0044237,GO:0044238,GO:0044248,GO:0044262,GO:0044275,GO:0044424,GO:0044444,GO:0044464,GO:0046352,GO:0050896,GO:0051716,GO:0071704,GO:1901575 3.2.1.93 ko:K01226 ko00500,map00500 R00837,R06113 RC00049 ko00000,ko00001,ko01000 GH13 iECW_1372.ECW_m4600,iEKO11_1354.EKO11_4072,iEcE24377_1341.EcE24377A_4811,iEcSMS35_1347.EcSMS35_4720,iWFL_1372.ECW_m4600 Bacteria 1TP53@1239,4HA1G@91061,COG0366@1,COG0366@2 NA|NA|NA G COG0366 Glycosidases IIAPBPCI_00258 1114965.Spaf_1558 5.5e-80 303.5 Bacilli treC GO:0003674,GO:0003824,GO:0004553,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005984,GO:0005991,GO:0005993,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008788,GO:0009056,GO:0009311,GO:0009313,GO:0009987,GO:0015927,GO:0016052,GO:0016787,GO:0016798,GO:0033554,GO:0044237,GO:0044238,GO:0044248,GO:0044262,GO:0044275,GO:0044424,GO:0044444,GO:0044464,GO:0046352,GO:0050896,GO:0051716,GO:0071704,GO:1901575 3.2.1.93 ko:K01226 ko00500,map00500 R00837,R06113 RC00049 ko00000,ko00001,ko01000 GH13 iECW_1372.ECW_m4600,iEKO11_1354.EKO11_4072,iEcE24377_1341.EcE24377A_4811,iEcSMS35_1347.EcSMS35_4720,iWFL_1372.ECW_m4600 Bacteria 1TP53@1239,4HA1G@91061,COG0366@1,COG0366@2 NA|NA|NA G COG0366 Glycosidases IIAPBPCI_00259 264199.stu1890 1.4e-54 218.8 Bacteria treB GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008150,GO:0008643,GO:0009401,GO:0015144,GO:0015766,GO:0015771,GO:0015772,GO:0016020,GO:0016740,GO:0016772,GO:0016773,GO:0022804,GO:0022857,GO:0034219,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:0090563,GO:0090589 2.7.1.201 ko:K02817,ko:K02818,ko:K02819 ko00500,ko02060,map00500,map02060 M00270 R02780 RC00017,RC03206 ko00000,ko00001,ko00002,ko01000,ko02000 4.A.1.2.13,4.A.1.2.4,4.A.1.2.8 iECABU_c1320.ECABU_c48060,ic_1306.c5339 Bacteria COG1263@1,COG1263@2 NA|NA|NA G PTS System IIAPBPCI_00260 264199.stu1892 2.2e-20 104.0 Bacteria treR ko:K03486,ko:K03710 ko00000,ko03000 Bacteria COG2188@1,COG2188@2 NA|NA|NA K DNA-binding transcription factor activity IIAPBPCI_00261 264199.stu1893 8.6e-87 326.2 Bacilli treR ko:K03486,ko:K03710 ko00000,ko03000 Bacteria 1TRF6@1239,4HDCX@91061,COG2188@1,COG2188@2 NA|NA|NA K trehalose operon IIAPBPCI_00262 322159.STER_1865 2.2e-94 351.7 Bacilli ywlG Bacteria 1V3H0@1239,4HH6F@91061,COG4475@1,COG4475@2 NA|NA|NA S Belongs to the UPF0340 family IIAPBPCI_00265 1046629.Ssal_02110 3.2e-33 147.5 Bacilli Bacteria 1TRSF@1239,4HDM3@91061,COG2826@1,COG2826@2 NA|NA|NA L PFAM Integrase, catalytic core IIAPBPCI_00266 264199.stu1898 9.3e-72 276.2 Bacilli Bacteria 1TRSF@1239,4HDM3@91061,COG2826@1,COG2826@2 NA|NA|NA L PFAM Integrase, catalytic core IIAPBPCI_00267 1151292.QEW_2309 2.4e-199 701.4 Peptostreptococcaceae Bacteria 1TPCB@1239,2485Y@186801,25R4G@186804,COG0582@1,COG0582@2 NA|NA|NA L Belongs to the 'phage' integrase family IIAPBPCI_00268 1121115.AXVN01000025_gene941 4.4e-29 133.3 Blautia Bacteria 1VABI@1239,24MZT@186801,2CCB2@1,32S7G@2,3Y0H0@572511 NA|NA|NA S Psort location Cytoplasmic, score 8.87 IIAPBPCI_00269 272563.CD630_22240 4.1e-31 140.2 Firmicutes Bacteria 1VJQN@1239,2AJW5@1,337FZ@2 NA|NA|NA S Helix-turn-helix domain IIAPBPCI_00270 169963.lmo1099 2.6e-53 214.5 Listeriaceae phyR ko:K03088 ko00000,ko03021 Bacteria 1W79P@1239,26MZ4@186820,4I0N4@91061,COG1595@1,COG1595@2 NA|NA|NA K Sigma-70, region 4 IIAPBPCI_00271 169963.lmo1100 0.0 1259.2 Listeriaceae cadA 3.6.3.3,3.6.3.5 ko:K01534 ko00000,ko01000 3.A.3.6 Bacteria 1TQ07@1239,26JS1@186820,4H9SP@91061,COG2217@1,COG2217@2 NA|NA|NA P E1-E2 ATPase IIAPBPCI_00272 169963.lmo1101 1.4e-63 249.2 Bacilli lspA 3.4.23.36 ko:K03101 ko03060,map03060 ko00000,ko00001,ko01000,ko01002 Bacteria 1VA9R@1239,4HIR4@91061,COG0597@1,COG0597@2 NA|NA|NA MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins IIAPBPCI_00273 169963.lmo1102 1e-46 192.6 Listeriaceae cadC ko:K21903 ko00000,ko03000 Bacteria 1VA6G@1239,26M2C@186820,4HJ09@91061,COG0640@1,COG0640@2 NA|NA|NA K helix_turn_helix, Arsenical Resistance Operon Repressor IIAPBPCI_00274 1069533.Sinf_0249 7.6e-154 549.7 Firmicutes Bacteria 1TRUP@1239,COG2801@1,COG2801@2 NA|NA|NA L Integrase core domain protein IIAPBPCI_00275 1116231.SMA_1992 6.3e-38 162.9 Bacteria ko:K07483,ko:K07497 ko00000 Bacteria COG2963@1,COG2963@2 NA|NA|NA L transposase activity IIAPBPCI_00276 883113.HMPREF9708_01392 1.1e-199 702.6 Bacilli Bacteria 1UI3B@1239,4ISBW@91061,COG0477@1,COG2814@2 NA|NA|NA EGP Major facilitator Superfamily IIAPBPCI_00277 264199.stu0099 1.9e-32 144.8 Bacteria spaC2 ko:K20484 ko02020,ko02024,map02020,map02024 ko00000,ko00001 Bacteria COG4403@1,COG4403@2 NA|NA|NA V Lanthionine synthetase C family protein IIAPBPCI_00278 322159.STER_1196 5.4e-197 693.3 Firmicutes Bacteria 1UEG7@1239,COG3039@1,COG3039@2 NA|NA|NA L transposase, IS4 family IIAPBPCI_00279 1116231.SMA_0302 1.4e-15 87.8 Bacilli tnp ko:K07498 ko00000 Bacteria 1UTIC@1239,4HCF1@91061,COG3316@1,COG3316@2 NA|NA|NA L DDE domain IIAPBPCI_00280 1215915.BN193_04215 2.1e-08 63.9 Bacilli Bacteria 1VJ28@1239,4HQR7@91061,COG3039@1,COG3039@2 NA|NA|NA L Transposase IIAPBPCI_00281 997830.HMPREF1124_1826 1.2e-43 182.2 Firmicutes Bacteria 1VFJD@1239,2E660@1,330UP@2 NA|NA|NA IIAPBPCI_00282 1214166.ALLG01000004_gene435 1.6e-45 188.7 Bacilli Bacteria 1VFMU@1239,2E59Z@1,33028@2,4HQG9@91061 NA|NA|NA IIAPBPCI_00283 1214166.ALLG01000004_gene434 1.6e-206 725.3 Bacilli uvrX 2.7.7.7 ko:K02346,ko:K03502,ko:K14161 ko00000,ko01000,ko03400 Bacteria 1TP42@1239,4HA1P@91061,COG0389@1,COG0389@2 NA|NA|NA L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII IIAPBPCI_00284 322159.STER_0151 3.3e-141 507.7 Firmicutes ko:K07485 ko00000 Bacteria 1TQ93@1239,COG3464@1,COG3464@2 NA|NA|NA L Transposase IIAPBPCI_00285 1046629.Ssal_00336 1.9e-13 80.5 Bacteria Bacteria COG3464@1,COG3464@2 NA|NA|NA IIAPBPCI_00286 322159.STER_1876 2.8e-165 587.8 Bacilli fba 4.1.2.13,4.1.2.29 ko:K01624,ko:K03339 ko00010,ko00030,ko00051,ko00562,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00562,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230 M00001,M00003,M00165,M00167,M00344,M00345 R01068,R01070,R01829,R02568,R05378 RC00438,RC00439,RC00603,RC00604,RC00721 ko00000,ko00001,ko00002,ko01000 Bacteria 1TQ01@1239,4H9ZU@91061,COG0191@1,COG0191@2 NA|NA|NA G aldolase IIAPBPCI_00288 264199.stu1900 1.6e-103 382.1 Bacteria 6.3.2.2 ko:K01919,ko:K06048 ko00270,ko00480,ko01100,map00270,map00480,map01100 M00118 R00894,R10993 RC00064,RC00090 ko00000,ko00001,ko00002,ko01000 Bacteria COG3572@1,COG3572@2 NA|NA|NA H ergothioneine biosynthetic process IIAPBPCI_00289 1046629.Ssal_00112 7.3e-34 149.4 Bacilli 6.3.2.2 ko:K01919,ko:K06048 ko00270,ko00480,ko01100,map00270,map00480,map01100 M00118 R00894,R10993 RC00064,RC00090 ko00000,ko00001,ko00002,ko01000 Bacteria 1TW3D@1239,4HTV4@91061,COG3572@1,COG3572@2 NA|NA|NA H gamma-glutamylcysteine synthetase IIAPBPCI_00290 904306.HMPREF9192_1984 3.2e-12 77.4 Bacilli 6.3.2.2 ko:K01919,ko:K06048 ko00270,ko00480,ko01100,map00270,map00480,map01100 M00118 R00894,R10993 RC00064,RC00090 ko00000,ko00001,ko00002,ko01000 Bacteria 1TW3D@1239,4HTV4@91061,COG3572@1,COG3572@2 NA|NA|NA H gamma-glutamylcysteine synthetase IIAPBPCI_00291 1046629.Ssal_00544 2.7e-13 80.1 Bacilli Bacteria 1TRSF@1239,4HDM3@91061,COG2826@1,COG2826@2 NA|NA|NA L PFAM Integrase, catalytic core IIAPBPCI_00292 1046629.Ssal_00197 1.6e-71 275.4 Bacilli Bacteria 1TRSF@1239,4HDM3@91061,COG2826@1,COG2826@2 NA|NA|NA L PFAM Integrase, catalytic core IIAPBPCI_00293 264199.stu1907 3.3e-62 244.2 Bacilli rplQ GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0030312,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02879,ko:K16193 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1V6JQ@1239,4HGX2@91061,COG0203@1,COG0203@2 NA|NA|NA J ribosomal protein l17 IIAPBPCI_00294 264199.stu1908 6.2e-171 606.7 Bacilli rpoA GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 ko:K03040 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 M00183 R00435,R00441,R00442,R00443 RC02795 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 Bacteria 1TPR8@1239,4H9R1@91061,COG0202@1,COG0202@2 NA|NA|NA K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates IIAPBPCI_00295 1214166.ALLG01000006_gene1437 9.6e-62 242.7 Streptococcus suis rpsK GO:0000028,GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0016043,GO:0016070,GO:0016072,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034660,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0048027,GO:0065003,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02948 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1V3IK@1239,1WTHI@1307,4HH2T@91061,COG0100@1,COG0100@2 NA|NA|NA J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome IIAPBPCI_00296 1046629.Ssal_00108 4e-57 227.3 Bacilli rpsM GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0019538,GO:0022613,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02952 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1V3JH@1239,4HGX6@91061,COG0099@1,COG0099@2 NA|NA|NA J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits IIAPBPCI_00297 1123301.KB904201_gene1724 6e-15 85.5 Bacteria rpmJ GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02919 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria COG0257@1,COG0257@2 NA|NA|NA J Belongs to the bacterial ribosomal protein bL36 family IIAPBPCI_00298 1123298.KB904065_gene2021 5.9e-32 142.9 Bacilli infA GO:0001871,GO:0003674,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008150,GO:0009986,GO:0016020,GO:0030246,GO:0030247,GO:0030312,GO:0040007,GO:0043021,GO:0043022,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071944,GO:2001065 ko:K02518 ko00000,ko03012 Bacteria 1V9ZK@1239,4HKF4@91061,COG0361@1,COG0361@2 NA|NA|NA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex IIAPBPCI_00299 264199.stu1913 9.2e-121 439.5 Bacilli adk GO:0003674,GO:0003824,GO:0004017,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576 2.7.4.3 ko:K00939 ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130 M00049 R00127,R01547,R11319 RC00002 ko00000,ko00001,ko00002,ko01000,ko04147 iHN637.CLJU_RS20110 Bacteria 1TP27@1239,4HA89@91061,COG0563@1,COG0563@2 NA|NA|NA F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism IIAPBPCI_00300 322159.STER_1887 3.6e-201 707.6 Bacilli secY GO:0002790,GO:0003674,GO:0005048,GO:0005215,GO:0005488,GO:0005575,GO:0005576,GO:0005623,GO:0005886,GO:0005887,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006616,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0022857,GO:0022884,GO:0031224,GO:0031226,GO:0031522,GO:0032940,GO:0032978,GO:0032991,GO:0033036,GO:0033218,GO:0033365,GO:0034613,GO:0040007,GO:0042277,GO:0042886,GO:0042887,GO:0043952,GO:0044425,GO:0044459,GO:0044464,GO:0045047,GO:0045184,GO:0046903,GO:0046907,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061024,GO:0065002,GO:0070727,GO:0070972,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:1904680 ko:K03076 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 ko00000,ko00001,ko00002,ko02044 3.A.5 Bacteria 1TPHB@1239,4HAWH@91061,COG0201@1,COG0201@2 NA|NA|NA U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently IIAPBPCI_00301 322159.STER_1888 1.3e-57 229.2 Bacilli rplO GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02876 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1V3KE@1239,4HFPW@91061,COG0200@1,COG0200@2 NA|NA|NA J binds to the 23S rRNA IIAPBPCI_00302 264199.stu1916 2.5e-23 114.0 Bacilli rpmD GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 ko:K02907 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1VEG4@1239,4HNHF@91061,COG1841@1,COG1841@2 NA|NA|NA J ribosomal protein l30 IIAPBPCI_00303 264199.stu1917 1.7e-79 302.0 Bacilli rpsE GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990145,GO:1990904 ko:K02988 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1V1B1@1239,4HFN4@91061,COG0098@1,COG0098@2 NA|NA|NA J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body IIAPBPCI_00304 264199.stu1918 1.9e-56 224.9 Bacilli rplR GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02881 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1V6DM@1239,4HIGF@91061,COG0256@1,COG0256@2 NA|NA|NA J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance IIAPBPCI_00305 264199.stu1919 2.3e-93 348.2 Bacilli rplF GO:0000027,GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0030312,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070180,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02933 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1V1FC@1239,4HFQD@91061,COG0097@1,COG0097@2 NA|NA|NA J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center IIAPBPCI_00306 1123304.AQYA01000030_gene1163 1.6e-67 261.9 Bacilli rpsH GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009894,GO:0009987,GO:0010467,GO:0010468,GO:0010608,GO:0015935,GO:0016043,GO:0019219,GO:0019222,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0031323,GO:0031329,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043487,GO:0043488,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0061013,GO:0065003,GO:0065007,GO:0065008,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903311,GO:1990904 ko:K02994 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1V3KK@1239,4HH32@91061,COG0096@1,COG0096@2 NA|NA|NA J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit IIAPBPCI_00307 264199.stu1921 1.5e-28 131.3 Bacilli rpsN GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02954 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1VEF6@1239,4HNKX@91061,COG0199@1,COG0199@2 NA|NA|NA J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site IIAPBPCI_00308 264199.stu1922 1.2e-94 352.4 Bacilli rplE GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02931 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1TPE0@1239,4HBAX@91061,COG0094@1,COG0094@2 NA|NA|NA J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits IIAPBPCI_00309 264199.stu1923 1.1e-47 195.7 Bacilli rplX GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0030312,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02895 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1V9ZQ@1239,4HKH9@91061,COG0198@1,COG0198@2 NA|NA|NA J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit IIAPBPCI_00310 264199.stu1924 1.1e-59 235.7 Bacilli rplN GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0071704,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02874 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1V3N0@1239,4HGYR@91061,COG0093@1,COG0093@2 NA|NA|NA J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome IIAPBPCI_00311 1046629.Ssal_00093 6e-39 166.4 Bacilli rpsQ GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02961 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1V9YC@1239,4HKDN@91061,COG0186@1,COG0186@2 NA|NA|NA J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA IIAPBPCI_00312 264199.stu1926 2.7e-26 124.0 Bacilli rpmC GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02904 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1VEME@1239,4HNUP@91061,COG0255@1,COG0255@2 NA|NA|NA J Belongs to the universal ribosomal protein uL29 family IIAPBPCI_00313 322159.STER_1900 1e-69 269.2 Bacilli rplP GO:0000027,GO:0000049,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02878 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1V1AY@1239,4HFPN@91061,COG0197@1,COG0197@2 NA|NA|NA J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs IIAPBPCI_00314 264199.stu1928 7.5e-115 419.9 Bacilli rpsC GO:0000028,GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030312,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02982 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1TPCP@1239,4HAUR@91061,COG0092@1,COG0092@2 NA|NA|NA J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation IIAPBPCI_00315 1046629.Ssal_00089 7.3e-53 213.0 Bacilli rplV GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005844,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0030312,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042788,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02890 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1V6PU@1239,4HIK2@91061,COG0091@1,COG0091@2 NA|NA|NA J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome IIAPBPCI_00316 322159.STER_1903 4.9e-47 193.4 Bacilli rpsS GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02965 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1V6CX@1239,4HIG0@91061,COG0185@1,COG0185@2 NA|NA|NA J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA IIAPBPCI_00317 264199.stu1931 2.6e-152 544.7 Bacilli rplB GO:0000027,GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046872,GO:0046914,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02886 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1TP9X@1239,4HAE8@91061,COG0090@1,COG0090@2 NA|NA|NA J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity IIAPBPCI_00318 264199.stu1932 2.4e-44 184.5 Bacilli rplW GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02892 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1VA4W@1239,4HKCV@91061,COG0089@1,COG0089@2 NA|NA|NA J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome IIAPBPCI_00319 1046629.Ssal_00085 7.4e-104 383.3 Bacilli rplD GO:0001130,GO:0001217,GO:0003674,GO:0003676,GO:0003700,GO:0003723,GO:0003735,GO:0004857,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005844,GO:0005886,GO:0006355,GO:0006412,GO:0006417,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008428,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015934,GO:0016020,GO:0016043,GO:0017148,GO:0019219,GO:0019222,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0030234,GO:0030312,GO:0030371,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032069,GO:0032074,GO:0032268,GO:0032269,GO:0032991,GO:0032993,GO:0034248,GO:0034249,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042788,GO:0043043,GO:0043086,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045182,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050790,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0051252,GO:0051253,GO:0051336,GO:0051346,GO:0060255,GO:0060698,GO:0060699,GO:0060700,GO:0060701,GO:0060702,GO:0065003,GO:0065007,GO:0065009,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0080090,GO:0097159,GO:0098772,GO:0140110,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1902679,GO:1903506,GO:1903507,GO:1990904,GO:2000112,GO:2000113,GO:2001141 ko:K02926,ko:K16193 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1TPGW@1239,4HB01@91061,COG0088@1,COG0088@2 NA|NA|NA J Forms part of the polypeptide exit tunnel IIAPBPCI_00320 264199.stu1934 1.8e-110 405.2 Bacilli rplC GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010604,GO:0010628,GO:0015934,GO:0016020,GO:0016043,GO:0019219,GO:0019222,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0031323,GO:0031325,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065003,GO:0065007,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0080090,GO:0090069,GO:0090070,GO:1901564,GO:1901566,GO:1901576,GO:1990904,GO:2000232,GO:2000234 ko:K02906 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1TPFT@1239,4HAEN@91061,COG0087@1,COG0087@2 NA|NA|NA J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit IIAPBPCI_00321 1046629.Ssal_00083 2.9e-48 197.6 Bacilli rpsJ GO:0001072,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006355,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0015935,GO:0019219,GO:0019222,GO:0019538,GO:0022626,GO:0022627,GO:0031323,GO:0031326,GO:0031554,GO:0031564,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043244,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0140110,GO:1901564,GO:1901566,GO:1901576,GO:1903506,GO:1990904,GO:2000112,GO:2001141 ko:K02946 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1V6C9@1239,4HIKH@91061,COG0051@1,COG0051@2 NA|NA|NA J Involved in the binding of tRNA to the ribosomes IIAPBPCI_00322 264199.stu1936 6.6e-187 659.8 Bacilli ruvB GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0031668,GO:0033554,GO:0050896,GO:0051716,GO:0071496 3.6.4.12 ko:K03551 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Bacteria 1TR47@1239,4HBMW@91061,COG2255@1,COG2255@2 NA|NA|NA L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing IIAPBPCI_00323 264199.stu1937 0.0 1158.3 Bacilli XK27_09800 Bacteria 1U6DU@1239,4H9XT@91061,COG1835@1,COG1835@2 NA|NA|NA I Acyltransferase IIAPBPCI_00324 264199.stu1938 1.7e-35 155.6 Firmicutes XK27_09805 Bacteria 1TRNW@1239,COG4642@1,COG4642@2 NA|NA|NA S MORN repeat protein IIAPBPCI_00325 264199.stu1939 5.2e-80 303.5 Bacilli ptpA 3.1.3.48 ko:K01104,ko:K20945 ko05111,map05111 ko00000,ko00001,ko01000 Bacteria 1V6SG@1239,4HIZN@91061,COG0394@1,COG0394@2 NA|NA|NA T Belongs to the low molecular weight phosphotyrosine protein phosphatase family IIAPBPCI_00326 1046629.Ssal_00039 3.6e-70 270.8 Firmicutes Bacteria 1TQ93@1239,COG3464@1,COG3464@2 NA|NA|NA L Transposase IIAPBPCI_00327 322159.STER_0151 1.1e-144 519.2 Firmicutes ko:K07485 ko00000 Bacteria 1TQ93@1239,COG3464@1,COG3464@2 NA|NA|NA L Transposase IIAPBPCI_00328 322159.STER_1913 7.8e-249 865.9 Bacilli purA GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046033,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.4 ko:K01939 ko00230,ko00250,ko01100,map00230,map00250,map01100 M00049 R01135 RC00458,RC00459 ko00000,ko00001,ko00002,ko01000 Bacteria 1TQ4C@1239,4H9YT@91061,COG0104@1,COG0104@2 NA|NA|NA F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP IIAPBPCI_00329 1046629.Ssal_00076 1.1e-89 335.9 Bacilli adk 2.7.4.3 ko:K00939 ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130 M00049 R00127,R01547,R11319 RC00002 ko00000,ko00001,ko00002,ko01000,ko04147 Bacteria 1V7AW@1239,4HH8A@91061,COG0563@1,COG0563@2 NA|NA|NA F topology modulation protein IIAPBPCI_00330 1116231.SMA_1917 2.2e-186 658.3 Bacteria yxaM Bacteria COG0477@1,COG2814@2 NA|NA|NA EGP Major facilitator Superfamily IIAPBPCI_00331 1116231.SMA_1918 1.3e-196 692.2 Bacteria 2.7.7.73,2.7.7.80 ko:K03148,ko:K21029 ko00730,ko01100,ko04122,map00730,map01100,map04122 R07459 RC00043 ko00000,ko00001,ko01000 Bacteria COG0476@1,COG0476@2 NA|NA|NA H Involved in molybdopterin and thiamine biosynthesis, family 2 IIAPBPCI_00332 322159.STER_0367 5.3e-206 723.4 Bacilli Bacteria 1TP4C@1239,4HAXJ@91061,COG3328@1,COG3328@2 NA|NA|NA L Transposase IIAPBPCI_00333 904306.HMPREF9192_1949 1.7e-48 198.4 Bacilli adk 2.7.4.3 ko:K00939 ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130 M00049 R00127,R01547,R11319 RC00002 ko00000,ko00001,ko00002,ko01000,ko04147 Bacteria 1V7AW@1239,4HH8A@91061,COG0563@1,COG0563@2 NA|NA|NA F topology modulation protein IIAPBPCI_00334 764298.STRMA_0446 1.7e-129 468.8 Bacilli Bacteria 1TR5M@1239,4HCD2@91061,COG1028@1,COG1028@2 NA|NA|NA IQ COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) IIAPBPCI_00335 927666.SOR_0524 9.7e-30 135.6 Streptococcus oralis Bacteria 1TWZ1@1239,1WPY9@1303,2DJ35@1,304P3@2,4I5TZ@91061 NA|NA|NA S Domain of unknown function (DUF4649) IIAPBPCI_00336 264199.stu1950 3.9e-127 461.1 Bacteria Z012_04635 Bacteria COG1396@1,COG1396@2 NA|NA|NA K sequence-specific DNA binding IIAPBPCI_00338 264199.stu1951 3.6e-232 810.4 Firmicutes ko:K06871 ko00000 Bacteria 1V5NX@1239,COG0641@1,COG0641@2 NA|NA|NA C Radical SAM IIAPBPCI_00339 264199.stu1952 5.6e-286 989.6 Bacilli ko:K02068,ko:K06148 M00211 ko00000,ko00002,ko02000 3.A.1 Bacteria 1VRZB@1239,4HV44@91061,COG1132@1,COG1132@2 NA|NA|NA V ABC transporter transmembrane region IIAPBPCI_00340 322159.STER_1926 2.5e-89 334.7 Bacteria Bacteria COG1476@1,COG1476@2 NA|NA|NA K sequence-specific DNA binding IIAPBPCI_00341 1403946.Q615_SPAC00126G0051 2.9e-155 554.7 Streptococcus anginosus group ko:K07467 ko00000 Bacteria 1VMP1@1239,42EH0@671232,4HSQH@91061,COG2946@1,COG2946@2 NA|NA|NA L Replication initiation factor IIAPBPCI_00342 585204.SMSK597_1426 1.9e-18 97.8 Streptococcus mitis Bacteria 1W5B5@1239,28YJG@1,2TQ3X@28037,2ZKDA@2,4I02K@91061 NA|NA|NA S Domain of unknown function (DUF3173) IIAPBPCI_00343 264199.stu1955 7.7e-216 756.1 Bacilli int Bacteria 1VTS1@1239,4HU1E@91061,COG0582@1,COG0582@2 NA|NA|NA L Belongs to the 'phage' integrase family IIAPBPCI_00345 264199.stu1957 1.1e-236 825.5 Bacilli rarA ko:K07478 ko00000 Bacteria 1TPVV@1239,4HAIS@91061,COG2256@1,COG2256@2 NA|NA|NA L ATPase related to the helicase subunit of the Holliday junction resolvase IIAPBPCI_00346 264199.stu1958 5.5e-26 122.9 Bacilli rpmB GO:0003674,GO:0003735,GO:0005198 ko:K02902 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1VEI2@1239,4HNIK@91061,COG0227@1,COG0227@2 NA|NA|NA J Belongs to the bacterial ribosomal protein bL28 family IIAPBPCI_00347 264199.stu1959 1.4e-43 181.8 Bacilli yrzL Bacteria 1VAC4@1239,4HKD0@91061,COG4472@1,COG4472@2 NA|NA|NA S Belongs to the UPF0297 family IIAPBPCI_00348 264199.stu1960 6.2e-70 270.0 Bacilli yqgF GO:0000966,GO:0000967,GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008296,GO:0008408,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0022613,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0040007,GO:0042254,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0140097,GO:1901360 ko:K07447 ko00000,ko01000 Bacteria 1V6ER@1239,4HH04@91061,COG0816@1,COG0816@2 NA|NA|NA L Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA IIAPBPCI_00349 322159.STER_1939 4.2e-44 183.7 Bacilli yrzB Bacteria 1VAPW@1239,4HKV7@91061,COG3906@1,COG3906@2 NA|NA|NA S Belongs to the UPF0473 family IIAPBPCI_00350 264199.stu1962 2.6e-297 1027.3 Bacilli ccs Bacteria 1V9D8@1239,2F2IJ@1,33VFI@2,4HS77@91061 NA|NA|NA S the current gene model (or a revised gene model) may contain a frame shift IIAPBPCI_00351 322159.STER_1942 0.0 1499.2 Bacilli nrdD GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008270,GO:0008998,GO:0009058,GO:0009117,GO:0009165,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0015949,GO:0016491,GO:0016725,GO:0016728,GO:0017076,GO:0018130,GO:0019001,GO:0019103,GO:0019438,GO:0019637,GO:0019692,GO:0030554,GO:0031250,GO:0032552,GO:0032553,GO:0032554,GO:0032555,GO:0032556,GO:0032558,GO:0032559,GO:0032560,GO:0032564,GO:0032567,GO:0032991,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046385,GO:0046483,GO:0046872,GO:0046914,GO:0051065,GO:0055086,GO:0055114,GO:0071704,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901576 1.1.98.6 ko:K21636 ko00230,ko00240,ko01100,map00230,map00240,map01100 M00053 R11633,R11634,R11635,R11636 RC00613 ko00000,ko00001,ko00002,ko01000 iECIAI39_1322.ECIAI39_4713,iPC815.YPO3454 Bacteria 1TR9K@1239,4HBIY@91061,COG1327@1,COG1327@2,COG1328@1,COG1328@2 NA|NA|NA F Ribonucleoside-triphosphate reductase IIAPBPCI_00352 435842.HMPREF0848_01736 7.5e-14 82.0 Bacilli Bacteria 1TXD1@1239,2DEKJ@1,2ZNBP@2,4HZYT@91061 NA|NA|NA IIAPBPCI_00353 322159.STER_1944 2.6e-91 341.3 Bacilli XK27_10930 Bacteria 1V1C4@1239,4HG6C@91061,COG3981@1,COG3981@2 NA|NA|NA K acetyltransferase IIAPBPCI_00354 322159.STER_1945 3.7e-116 424.1 Bacilli nrdG GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008998,GO:0009058,GO:0009117,GO:0009165,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0015949,GO:0016491,GO:0016725,GO:0016728,GO:0018130,GO:0019438,GO:0019637,GO:0019692,GO:0031250,GO:0032991,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046385,GO:0046483,GO:0048037,GO:0051536,GO:0051539,GO:0051540,GO:0055086,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901576 1.97.1.4 ko:K04068 R04710 ko00000,ko01000 iE2348C_1286.E2348C_4563 Bacteria 1V1HG@1239,4HGJ9@91061,COG0602@1,COG0602@2 NA|NA|NA O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine IIAPBPCI_00355 322159.STER_1946 2.4e-147 528.1 Bacilli yaaA GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0033194,GO:0042221,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:1901700 ko:K09861 ko00000 Bacteria 1TR33@1239,4HFN2@91061,COG3022@1,COG3022@2 NA|NA|NA S Belongs to the UPF0246 family IIAPBPCI_00356 322159.STER_1947 9.9e-169 599.4 Bacilli XK27_01785 Bacteria 1TRBT@1239,4HBPR@91061,COG1284@1,COG1284@2 NA|NA|NA S cog cog1284 IIAPBPCI_00357 322159.STER_1948 0.0 1144.4 Bacilli aspS 6.1.1.12 ko:K01876 ko00970,map00970 M00359,M00360 R05577 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Bacteria 1TPCN@1239,4HACD@91061,COG0173@1,COG0173@2 NA|NA|NA J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp) IIAPBPCI_00359 322159.STER_1950 1.6e-241 841.6 Bacilli hisS 6.1.1.21 ko:K01892 ko00970,map00970 M00359,M00360 R03655 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Bacteria 1TP3D@1239,4HAM2@91061,COG0124@1,COG0124@2 NA|NA|NA J histidyl-tRNA synthetase IIAPBPCI_00360 1046629.Ssal_00053 5.7e-52 209.9 Bacilli metE 2.1.1.14 ko:K00549 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 M00017 R04405,R09365 RC00035,RC00113,RC01241 ko00000,ko00001,ko00002,ko01000 Bacteria 1TPDQ@1239,4HADW@91061,COG0620@1,COG0620@2 NA|NA|NA E Methionine synthase IIAPBPCI_00361 1046629.Ssal_00053 7.6e-64 249.6 Bacilli metE 2.1.1.14 ko:K00549 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 M00017 R04405,R09365 RC00035,RC00113,RC01241 ko00000,ko00001,ko00002,ko01000 Bacteria 1TPDQ@1239,4HADW@91061,COG0620@1,COG0620@2 NA|NA|NA E Methionine synthase IIAPBPCI_00362 1046629.Ssal_00053 9.2e-36 155.6 Bacilli metE 2.1.1.14 ko:K00549 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 M00017 R04405,R09365 RC00035,RC00113,RC01241 ko00000,ko00001,ko00002,ko01000 Bacteria 1TPDQ@1239,4HADW@91061,COG0620@1,COG0620@2 NA|NA|NA E Methionine synthase IIAPBPCI_00363 1123315.AUIP01000010_gene919 2e-25 120.9 Bacilli rpmF GO:0000027,GO:0000302,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006950,GO:0006979,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009628,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042221,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050896,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1901700,GO:1990904 ko:K02911 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011,ko03029 Bacteria 1VKMZ@1239,4HR2Q@91061,COG0333@1,COG0333@2 NA|NA|NA J Belongs to the bacterial ribosomal protein bL32 family IIAPBPCI_00364 1046629.Ssal_00051 6.7e-19 99.0 Bacteria rpmG GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042221,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046677,GO:0050896,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02913 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria COG0267@1,COG0267@2 NA|NA|NA J Belongs to the bacterial ribosomal protein bL33 family IIAPBPCI_00367 1069533.Sinf_1920 3.9e-115 421.0 Firmicutes yegS GO:0001727,GO:0003674,GO:0003824,GO:0006629,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0030258,GO:0044237,GO:0044238,GO:0044255,GO:0046834,GO:0071704 2.7.1.107 ko:K07029 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 R02240 RC00002,RC00017 ko00000,ko00001,ko01000 Bacteria 1TQ9A@1239,COG1597@1,COG1597@2 NA|NA|NA I Diacylglycerol kinase IIAPBPCI_00368 1069533.Sinf_1920 2.9e-15 87.0 Firmicutes yegS GO:0001727,GO:0003674,GO:0003824,GO:0006629,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0030258,GO:0044237,GO:0044238,GO:0044255,GO:0046834,GO:0071704 2.7.1.107 ko:K07029 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 R02240 RC00002,RC00017 ko00000,ko00001,ko01000 Bacteria 1TQ9A@1239,COG1597@1,COG1597@2 NA|NA|NA I Diacylglycerol kinase IIAPBPCI_00369 264199.stu1980 3.6e-95 354.4 Firmicutes Bacteria 1TRFZ@1239,COG1808@1,COG1808@2 NA|NA|NA S Hydrophobic domain protein IIAPBPCI_00371 322159.STER_1959 3.7e-27 127.1 Bacilli Bacteria 1VENK@1239,4HNKV@91061,COG2261@1,COG2261@2 NA|NA|NA S Membrane IIAPBPCI_00372 322159.STER_1960 1.7e-99 368.6 Bacilli Bacteria 1VK2R@1239,2ED8H@1,33752@2,4HQ99@91061 NA|NA|NA IIAPBPCI_00373 264199.stu1984 1.8e-23 114.4 Bacteria Bacteria COG5547@1,COG5547@2 NA|NA|NA S Small integral membrane protein IIAPBPCI_00374 264199.stu1986 6.5e-83 313.5 Bacteria Bacteria COG1302@1,COG1302@2 NA|NA|NA M Protein conserved in bacteria IIAPBPCI_00375 264199.stu1987 9.2e-11 72.4 Bacteria Bacteria COG3237@1,COG3237@2 NA|NA|NA K CsbD-like IIAPBPCI_00376 1046629.Ssal_00038 1.1e-107 396.0 Bacilli nudL GO:0003674,GO:0003824,GO:0016787,GO:0016817,GO:0016818 Bacteria 1V6SF@1239,4HG46@91061,COG0494@1,COG0494@2 NA|NA|NA L hydrolase IIAPBPCI_00377 322159.STER_0367 4.8e-221 773.5 Bacilli Bacteria 1TP4C@1239,4HAXJ@91061,COG3328@1,COG3328@2 NA|NA|NA L Transposase IIAPBPCI_00378 435842.HMPREF0848_01721 3e-48 197.6 Bacilli ko:K10947 ko00000,ko03000 Bacteria 1VIVQ@1239,4IR4R@91061,COG1695@1,COG1695@2 NA|NA|NA K transcriptional regulator, PadR family IIAPBPCI_00379 435842.HMPREF0848_01720 9.6e-08 61.2 Bacilli XK27_06920 Bacteria 1VBG6@1239,4HSRQ@91061,COG4709@1,COG4709@2 NA|NA|NA S Protein of unknown function (DUF1700) IIAPBPCI_00380 904306.HMPREF9192_1905 9.1e-13 79.3 Bacilli XK27_06920 Bacteria 1VBG6@1239,4HSRQ@91061,COG4709@1,COG4709@2 NA|NA|NA S Protein of unknown function (DUF1700) IIAPBPCI_00381 264199.stu1992 1.3e-106 392.9 Bacilli Bacteria 1VGGF@1239,4I0VY@91061,COG3595@1,COG3595@2 NA|NA|NA S Putative adhesin IIAPBPCI_00382 322159.STER_1969 4e-158 565.5 Bacilli XK27_06930 ko:K01421 ko00000 Bacteria 1TQ15@1239,4H9T9@91061,COG1511@1,COG1511@2 NA|NA|NA V domain protein IIAPBPCI_00383 264199.stu1995 2.1e-94 351.7 Bacteria XK27_06935 Bacteria COG1309@1,COG1309@2 NA|NA|NA K transcriptional regulator IIAPBPCI_00384 1046629.Ssal_00032 5.5e-11 72.4 Firmicutes ypaA ko:K08987 ko00000 Bacteria 1VAEU@1239,COG3759@1,COG3759@2 NA|NA|NA M Membrane IIAPBPCI_00385 1123318.KB904633_gene1270 2e-07 61.2 Bacilli Bacteria 1W3FT@1239,2914P@1,2ZNS1@2,4I23Q@91061 NA|NA|NA IIAPBPCI_00386 264199.stu1997 4.9e-108 397.1 Bacilli rpsD GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006417,GO:0006450,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0015935,GO:0019222,GO:0019843,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0032991,GO:0034248,GO:0034250,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0045727,GO:0045903,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0065008,GO:0080090,GO:0097159,GO:1901363,GO:1990904,GO:2000112 ko:K02986 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1TR0J@1239,4HAC9@91061,COG0522@1,COG0522@2 NA|NA|NA J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit IIAPBPCI_00387 264199.stu1998 8.2e-48 196.1 Bacilli veg Bacteria 1VPZY@1239,4HSFF@91061,COG4466@1,COG4466@2 NA|NA|NA S Biofilm formation stimulator VEG IIAPBPCI_00388 322159.STER_1975 1.5e-245 855.1 Bacilli dnaB GO:0003674,GO:0003678,GO:0003824,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006268,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0032392,GO:0032508,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051276,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360,GO:1901576 3.6.4.12 ko:K02314 ko03030,ko04112,map03030,map04112 ko00000,ko00001,ko01000,ko03032 Bacteria 1TPCT@1239,4H9Y8@91061,COG0305@1,COG0305@2 NA|NA|NA L Participates in initiation and elongation during chromosome replication IIAPBPCI_00389 435842.HMPREF0848_01711 8.5e-73 279.6 Bacilli rplI GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0030312,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0071704,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02939 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1V6QG@1239,4HIKJ@91061,COG0359@1,COG0359@2 NA|NA|NA J binds to the 23S rRNA IIAPBPCI_00390 322159.STER_1977 0.0 1255.0 Bacilli yybT Bacteria 1TPGP@1239,4HBVH@91061,COG3887@1,COG3887@2 NA|NA|NA T signaling protein consisting of a modified GGDEF domain and a DHH domain IIAPBPCI_00391 435842.HMPREF0848_01709 0.0 1224.2 Bacilli gidA GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009314,GO:0009411,GO:0009416,GO:0009451,GO:0009628,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0050896,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 ko:K03495 R08701 RC00053,RC00209,RC00870 ko00000,ko03016,ko03036 Bacteria 1TQ4B@1239,4HA6S@91061,COG0445@1,COG0445@2 NA|NA|NA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 IIAPBPCI_00392 435842.HMPREF0848_01708 3.7e-76 290.8 Bacilli Bacteria 1VAVP@1239,4HSPC@91061,COG1051@1,COG1051@2 NA|NA|NA F NUDIX domain IIAPBPCI_00393 1046629.Ssal_00023 3.2e-214 750.7 Bacilli mnmA GO:0001510,GO:0002097,GO:0002098,GO:0002143,GO:0003674,GO:0003824,GO:0004808,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016782,GO:0016783,GO:0030488,GO:0032259,GO:0034227,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.8.1.13 ko:K00566 ko04122,map04122 R08700 RC02313,RC02315 ko00000,ko00001,ko01000,ko03016 Bacteria 1TPIZ@1239,4HBJ6@91061,COG0482@1,COG0482@2 NA|NA|NA J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 IIAPBPCI_00394 322159.STER_1980 1.2e-300 1038.5 Bacilli Bacteria 1V0XZ@1239,4HEBN@91061,COG4485@1,COG4485@2 NA|NA|NA S Bacterial membrane protein, YfhO IIAPBPCI_00395 322159.STER_1981 1.7e-63 249.2 Bacilli isaA ko:K21687 ko00000 GH23 Bacteria 1VGPA@1239,4HP1I@91061,COG0741@1,COG0741@2 NA|NA|NA M Immunodominant staphylococcal antigen A IIAPBPCI_00396 264199.stu2006 3.9e-80 304.3 Bacilli lytE Bacteria 1VA10@1239,4HMUH@91061,COG1388@1,COG1388@2 NA|NA|NA M LysM domain protein IIAPBPCI_00397 264199.stu2007 1.6e-135 488.8 Bacilli ecfT GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006820,GO:0006855,GO:0008150,GO:0008509,GO:0008514,GO:0015075,GO:0015238,GO:0015711,GO:0015893,GO:0016020,GO:0022857,GO:0032217,GO:0032218,GO:0034220,GO:0035461,GO:0042221,GO:0042493,GO:0044464,GO:0050896,GO:0051179,GO:0051180,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0090482,GO:0098656 ko:K02008,ko:K16783,ko:K16785 ko02010,map02010 M00245,M00246,M00581,M00582 ko00000,ko00001,ko00002,ko02000 3.A.1.18,3.A.1.22,3.A.1.23,3.A.1.25,3.A.1.25.1,3.A.1.28,3.A.1.29,3.A.1.30,3.A.1.31,3.A.1.32,3.A.1.33,3.A.1.35 Bacteria 1TQ0E@1239,4H9VT@91061,COG0619@1,COG0619@2 NA|NA|NA P Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates IIAPBPCI_00398 264199.stu2008 7.6e-152 543.1 Bacilli ecfA2 GO:0000166,GO:0003674,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006820,GO:0006855,GO:0008144,GO:0008150,GO:0008509,GO:0008514,GO:0015075,GO:0015238,GO:0015711,GO:0015893,GO:0016020,GO:0017076,GO:0022857,GO:0030554,GO:0032217,GO:0032218,GO:0032553,GO:0032555,GO:0032559,GO:0034220,GO:0035461,GO:0035639,GO:0036094,GO:0042221,GO:0042493,GO:0043167,GO:0043168,GO:0044464,GO:0050896,GO:0051179,GO:0051180,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0090482,GO:0097159,GO:0097367,GO:0098656,GO:1901265,GO:1901363 3.6.3.55 ko:K02068,ko:K06857,ko:K16784,ko:K16786,ko:K16787 ko02010,map02010 M00186,M00211,M00581,M00582 R10531 RC00002 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.25,3.A.1.25.1,3.A.1.28,3.A.1.29,3.A.1.30,3.A.1.31,3.A.1.32,3.A.1.33,3.A.1.35,3.A.1.6.2,3.A.1.6.4 Bacteria 1TPH8@1239,4HA7T@91061,COG1122@1,COG1122@2 NA|NA|NA P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates IIAPBPCI_00399 322159.STER_1985 6.3e-151 540.0 Bacilli ecfA1 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006820,GO:0006855,GO:0008150,GO:0008509,GO:0008514,GO:0015075,GO:0015238,GO:0015711,GO:0015893,GO:0016020,GO:0022857,GO:0032217,GO:0032218,GO:0034220,GO:0035461,GO:0042221,GO:0042493,GO:0044464,GO:0050896,GO:0051179,GO:0051180,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0090482,GO:0098656 ko:K16784,ko:K16786,ko:K16787 ko02010,map02010 M00581,M00582 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.25,3.A.1.25.1,3.A.1.28,3.A.1.29,3.A.1.30,3.A.1.31,3.A.1.32,3.A.1.33,3.A.1.35 Bacteria 1TPH8@1239,4H9R8@91061,COG1122@1,COG1122@2 NA|NA|NA P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates IIAPBPCI_00400 264199.stu2010 4.1e-90 337.4 Bacilli pgsA GO:0006629,GO:0006644,GO:0006650,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0045017,GO:0046474,GO:0046486,GO:0071704,GO:0090407,GO:1901576 2.7.8.41,2.7.8.5 ko:K00995,ko:K08744 ko00564,ko01100,map00564,map01100 R01801,R02030 RC00002,RC00017,RC02795 ko00000,ko00001,ko01000 iSB619.SA_RS06365 Bacteria 1V6PJ@1239,4HCEX@91061,COG0558@1,COG0558@2 NA|NA|NA I Belongs to the CDP-alcohol phosphatidyltransferase class-I family IIAPBPCI_00401 322159.STER_1987 7e-137 493.4 Bacteria ymfM ko:K15539 ko00000 Bacteria COG1426@1,COG1426@2 NA|NA|NA S sequence-specific DNA binding IIAPBPCI_00402 264199.stu2012 4.7e-238 830.1 Bacilli ymfH ko:K07263 ko00000,ko01000,ko01002 Bacteria 1TP5I@1239,4H9YG@91061,COG0612@1,COG0612@2 NA|NA|NA S Peptidase M16 IIAPBPCI_00403 322159.STER_1989 4.5e-233 813.5 Bacilli ymfF Bacteria 1TPN6@1239,4H9P5@91061,COG0612@1,COG0612@2 NA|NA|NA S Peptidase M16 IIAPBPCI_00404 264199.stu2014 3.6e-45 187.6 Bacilli yaaA GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 ko:K14761 ko00000,ko03009 Bacteria 1VKF4@1239,4HRX5@91061,COG2501@1,COG2501@2 NA|NA|NA S S4 domain protein YaaA IIAPBPCI_00405 322159.STER_1991 1.5e-203 715.3 Bacilli recF GO:0000731,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009295,GO:0009987,GO:0018130,GO:0019438,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043590,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:1901360,GO:1901362,GO:1901576 ko:K03629 ko03440,map03440 ko00000,ko00001,ko03400 Bacteria 1TP9U@1239,4HA0W@91061,COG1195@1,COG1195@2 NA|NA|NA L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP IIAPBPCI_00406 322159.STER_1992 4.7e-274 949.9 Bacilli guaB GO:0003674,GO:0003824,GO:0003938,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006183,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009163,GO:0009165,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009987,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046039,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0050896,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 1.1.1.205 ko:K00088 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 M00050 R01130,R08240 RC00143,RC02207 ko00000,ko00001,ko00002,ko01000,ko04147 iAPECO1_1312.APECO1_4018,iECABU_c1320.ECABU_c28100,iECP_1309.ECP_2510,iECSF_1327.ECSF_2349,iUTI89_1310.UTI89_C2826,ic_1306.c3027 Bacteria 1TNZ1@1239,4H9V3@91061,COG0516@1,COG0516@2,COG0517@1,COG0517@2 NA|NA|NA F Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth IIAPBPCI_00407 264199.stu2018 6.3e-193 679.9 Bacilli trpS GO:0003674,GO:0003824,GO:0004812,GO:0004830,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006436,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.2 ko:K01867 ko00970,map00970 M00359,M00360 R03664 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Bacteria 1TPY7@1239,4HA1K@91061,COG0180@1,COG0180@2 NA|NA|NA J Tryptophanyl-tRNA synthetase IIAPBPCI_00408 322159.STER_1994 3.4e-124 451.1 Bacilli yvjA Bacteria 1TR9J@1239,4H9N6@91061,COG1284@1,COG1284@2 NA|NA|NA S membrane IIAPBPCI_00409 264199.stu2020 6.7e-306 1055.8 Bacilli ybiT GO:0006950,GO:0008150,GO:0009266,GO:0009409,GO:0009628,GO:0050896 ko:K06158 ko00000,ko03012 Bacteria 1TPW0@1239,4HATH@91061,COG0488@1,COG0488@2 NA|NA|NA S abc transporter atp-binding protein IIAPBPCI_00410 264199.stu2021 0.0 1660.2 Bacilli XK27_10405 Bacteria 1TRR1@1239,4HCR9@91061,COG4485@1,COG4485@2 NA|NA|NA S Bacterial membrane protein YfhO IIAPBPCI_00414 264199.stu2022 1.8e-119 435.3 Firmicutes yoaK Bacteria 1V1VQ@1239,COG3619@1,COG3619@2 NA|NA|NA S Psort location CytoplasmicMembrane, score IIAPBPCI_00415 264199.stu2023 7.4e-86 323.2 Bacilli rlmH 2.1.1.177 ko:K00783 ko00000,ko01000,ko03009 Bacteria 1V3JM@1239,4HFP8@91061,COG1576@1,COG1576@2 NA|NA|NA J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA IIAPBPCI_00416 264199.stu2024 5.6e-196 690.3 Bacilli htrA GO:0008150,GO:0009266,GO:0009628,GO:0050896 3.4.21.107 ko:K04691,ko:K04771 ko01503,ko02020,map01503,map02020 M00728 ko00000,ko00001,ko00002,ko01000,ko01002,ko03110 Bacteria 1TRM8@1239,4HA31@91061,COG0265@1,COG0265@2 NA|NA|NA O Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain' IIAPBPCI_00417 322159.STER_2003 1.4e-133 482.3 Bacilli parB ko:K03497 ko00000,ko03000,ko03036,ko04812 Bacteria 1TQ2B@1239,4H9TB@91061,COG1475@1,COG1475@2 NA|NA|NA K Belongs to the ParB family IIAPBPCI_00418 264199.stu0001 4.8e-257 893.3 Bacilli dnaA GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0034641,GO:0034645,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576,GO:1990837 ko:K02313 ko02020,ko04112,map02020,map04112 ko00000,ko00001,ko03032,ko03036 Bacteria 1TPV7@1239,4H9MW@91061,COG0593@1,COG0593@2 NA|NA|NA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids IIAPBPCI_00419 322159.STER_0002 8.2e-202 709.5 Bacilli dnaN 2.7.7.7 ko:K02338 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Bacteria 1TQ7J@1239,4H9TF@91061,COG0592@1,COG0592@2 NA|NA|NA L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria IIAPBPCI_00420 1046629.Ssal_02164 4.1e-29 133.3 Bacilli yyzM Bacteria 1VEQ7@1239,4HNHU@91061,COG4481@1,COG4481@2 NA|NA|NA S Protein conserved in bacteria IIAPBPCI_00421 264199.stu0004 8.6e-204 716.1 Bacilli ychF GO:0003674,GO:0003824,GO:0004857,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006950,GO:0006979,GO:0008150,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030234,GO:0043021,GO:0043022,GO:0043023,GO:0043086,GO:0044092,GO:0044424,GO:0044464,GO:0044877,GO:0050790,GO:0050896,GO:0065007,GO:0065009,GO:0098772 ko:K06942 ko00000,ko03009 Bacteria 1TPRK@1239,4H9SQ@91061,COG0012@1,COG0012@2 NA|NA|NA J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner IIAPBPCI_00422 264199.stu0005 1.4e-104 385.6 Bacilli pth GO:0003674,GO:0003824,GO:0004045,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0016787,GO:0016788,GO:0040007,GO:0044464,GO:0052689,GO:0071944,GO:0140098,GO:0140101 3.1.1.29 ko:K01056 ko00000,ko01000,ko03012 Bacteria 1V3NB@1239,4HH2Z@91061,COG0193@1,COG0193@2 NA|NA|NA J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis IIAPBPCI_00423 322159.STER_0007 0.0 2258.0 Bacilli mfd ko:K03723 ko03420,map03420 ko00000,ko00001,ko01000,ko03400 Bacteria 1TPF1@1239,4H9NB@91061,COG1197@1,COG1197@2 NA|NA|NA L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site IIAPBPCI_00424 264199.stu0007 1.7e-39 168.3 Bacilli yabO GO:0008150,GO:0040007 Bacteria 1VEI5@1239,4HKJJ@91061,COG1188@1,COG1188@2 NA|NA|NA J Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) IIAPBPCI_00425 322159.STER_0009 2.7e-61 241.1 Bacilli divIC ko:K05589,ko:K13052 ko00000,ko03036 Bacteria 1VKC5@1239,4HR53@91061,COG2919@1,COG2919@2 NA|NA|NA D Septum formation initiator IIAPBPCI_00427 322159.STER_0011 1.5e-239 835.1 Bacilli XK27_09285 3.5.2.6 ko:K01467,ko:K17836 ko00311,ko01130,ko01501,ko02020,map00311,map01130,map01501,map02020 M00627,M00628 R06363 RC01499 ko00000,ko00001,ko00002,ko01000,ko01504 Bacteria 1VGXR@1239,4IPWW@91061,COG2367@1,COG2367@2 NA|NA|NA V Beta-lactamase enzyme family IIAPBPCI_00428 264199.stu0010 1.2e-238 832.0 Bacilli tilS 2.4.2.8,6.3.4.19 ko:K04075,ko:K15780 ko00230,ko01100,ko01110,map00230,map01100,map01110 R01132,R01229,R02142,R09597 RC00063,RC00122,RC02633,RC02634 ko00000,ko00001,ko01000,ko03016 Bacteria 1TPXP@1239,4H9ZM@91061,COG0037@1,COG0037@2 NA|NA|NA D Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine IIAPBPCI_00429 264199.stu0011 3.4e-97 360.9 Bacilli hpt GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.4.2.8,6.3.4.19 ko:K00760,ko:K15780 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 R00190,R01132,R01229,R02142,R08237,R08238,R08245 RC00063,RC00122 ko00000,ko00001,ko01000,ko03016 Bacteria 1V1C9@1239,4HFZ2@91061,COG0634@1,COG0634@2 NA|NA|NA F Belongs to the purine pyrimidine phosphoribosyltransferase family IIAPBPCI_00430 322159.STER_0014 0.0 1253.0 Bacilli ftsH GO:0003674,GO:0003824,GO:0004176,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009056,GO:0009057,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019538,GO:0030163,GO:0030428,GO:0032502,GO:0042623,GO:0043170,GO:0043934,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575 ko:K03798 M00742 ko00000,ko00002,ko01000,ko01002,ko03110 Bacteria 1TPTV@1239,4HAJB@91061,COG0465@1,COG0465@2 NA|NA|NA O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins IIAPBPCI_00431 322159.STER_0015 1.7e-162 578.6 Firmicutes ko:K07485 ko00000 Bacteria 1TQ93@1239,COG3464@1,COG3464@2 NA|NA|NA L Transposase IIAPBPCI_00432 322159.STER_1757 3.3e-43 180.6 Bacteria ko:K07483 ko00000 Bacteria COG2963@1,COG2963@2 NA|NA|NA L transposase activity IIAPBPCI_00433 322159.STER_0016 2.9e-18 97.8 Firmicutes ko:K07483 ko00000 Bacteria 1W68S@1239,COG2963@1,COG2963@2 NA|NA|NA L Transposase IIAPBPCI_00434 888048.HMPREF8577_0808 4e-102 377.5 Bacilli ko:K07497 ko00000 Bacteria 1TQQY@1239,4HC8M@91061,COG2801@1,COG2801@2 NA|NA|NA L Transposase and inactivated derivatives IIAPBPCI_00447 1198676.SMUGS5_00840 5.3e-11 72.0 Firmicutes Bacteria 1VP0T@1239,2EG8N@1,33A0G@2 NA|NA|NA IIAPBPCI_00453 322159.STER_0040 3.6e-138 497.7 Bacilli mreC GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0007163,GO:0008150,GO:0008360,GO:0009273,GO:0009987,GO:0016020,GO:0016021,GO:0022603,GO:0022604,GO:0030428,GO:0031224,GO:0031226,GO:0042546,GO:0043621,GO:0044085,GO:0044425,GO:0044459,GO:0044464,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0065007,GO:0065008,GO:0071554,GO:0071840,GO:0071944,GO:0071963 ko:K03570 ko00000,ko03036 9.B.157.1 Bacteria 1TR1V@1239,4HB0K@91061,COG1792@1,COG1792@2 NA|NA|NA M Involved in formation and maintenance of cell shape IIAPBPCI_00454 322159.STER_0041 8.2e-88 329.7 Bacteria mreD GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0008150,GO:0008360,GO:0016020,GO:0016021,GO:0022603,GO:0022604,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0065007,GO:0065008,GO:0071944 ko:K03571 ko00000,ko03036 9.B.157.1 Bacteria COG2891@1,COG2891@2 NA|NA|NA M Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins IIAPBPCI_00455 322159.STER_0042 2e-96 359.8 Bacilli usp 3.5.1.28 ko:K21471,ko:K22409 ko00000,ko01000,ko01002,ko01011 CBM50 Bacteria 1VCXB@1239,4IS6H@91061,COG3883@1,COG3883@2,COG3942@1,COG3942@2 NA|NA|NA S CHAP domain IIAPBPCI_00456 264199.stu0023 4.3e-175 620.5 Bacilli prs 2.7.6.1 ko:K00948 ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230 M00005 R01049 RC00002,RC00078 ko00000,ko00001,ko00002,ko01000 iAF987.Gmet_2848 Bacteria 1TQ6Q@1239,4HB61@91061,COG0462@1,COG0462@2 NA|NA|NA F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) IIAPBPCI_00457 264199.stu0025 7.3e-26 122.5 Bacteria Bacteria COG3464@1,COG3464@2 NA|NA|NA IIAPBPCI_00458 264199.stu0026 5.5e-217 760.0 Bacilli araT 2.6.1.1 ko:K00812,ko:K00841,ko:K10907 ko00220,ko00250,ko00270,ko00300,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00300,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230 M00525 R00355,R00694,R00734,R00896,R02433,R02619,R04467,R05052 RC00006 ko00000,ko00001,ko00002,ko01000,ko01007 Bacteria 1TP0J@1239,4HA13@91061,COG0436@1,COG0436@2 NA|NA|NA E Aminotransferase IIAPBPCI_00459 322159.STER_0046 1e-142 512.7 Bacilli recO GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009295,GO:0009987,GO:0033554,GO:0034641,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043590,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360 ko:K03584 ko03440,map03440 ko00000,ko00001,ko03400 Bacteria 1UZ19@1239,4HAHI@91061,COG1381@1,COG1381@2 NA|NA|NA L Involved in DNA repair and RecF pathway recombination IIAPBPCI_00460 322159.STER_0047 2.5e-178 631.3 Bacilli plsX GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.3.1.15 ko:K03621 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 M00089 R00851,R09380 RC00004,RC00039,RC00041 ko00000,ko00001,ko00002,ko01000,ko01004 Bacteria 1TPXS@1239,4HA0R@91061,COG0416@1,COG0416@2 NA|NA|NA I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA IIAPBPCI_00461 322159.STER_0048 4.2e-34 150.2 Bacteria acpP1 ko:K02078 ko00000,ko00001 Bacteria COG0236@1,COG0236@2 NA|NA|NA IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis IIAPBPCI_00462 264199.stu0030 4.4e-129 467.2 Bacilli purC GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016874,GO:0016879,GO:0016881,GO:0044424,GO:0044444,GO:0044464 4.1.1.21,4.3.2.2,6.3.2.6 ko:K01587,ko:K01756,ko:K01923 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 M00048,M00049 R01083,R04209,R04559,R04591 RC00064,RC00162,RC00379,RC00444,RC00445,RC00590 ko00000,ko00001,ko00002,ko01000 iAF1260.b2476,iB21_1397.B21_02330,iBWG_1329.BWG_2240,iE2348C_1286.E2348C_2713,iEC042_1314.EC042_2677,iEC55989_1330.EC55989_2759,iECABU_c1320.ECABU_c27880,iECBD_1354.ECBD_1213,iECB_1328.ECB_02368,iECDH10B_1368.ECDH10B_2642,iECDH1ME8569_1439.ECDH1ME8569_2402,iECDH1ME8569_1439.EcDH1_1193,iECD_1391.ECD_02368,iECED1_1282.ECED1_2911,iECH74115_1262.ECH74115_3698,iECIAI1_1343.ECIAI1_2527,iECNA114_1301.ECNA114_2561,iECO103_1326.ECO103_2988,iECO111_1330.ECO111_3199,iECO26_1355.ECO26_3522,iECOK1_1307.ECOK1_2784,iECP_1309.ECP_2490,iECS88_1305.ECS88_2658,iECSE_1348.ECSE_2760,iECSF_1327.ECSF_2329,iECSP_1301.ECSP_3415,iECUMN_1333.ECUMN_2789,iECW_1372.ECW_m2698,iECs_1301.ECs3338,iEKO11_1354.EKO11_1259,iETEC_1333.ETEC_2581,iEcDH1_1363.EcDH1_1193,iEcE24377_1341.EcE24377A_2757,iEcHS_1320.EcHS_A2607,iEcSMS35_1347.EcSMS35_2623,iEcolC_1368.EcolC_1200,iG2583_1286.G2583_2999,iJN746.PP_1240,iJO1366.b2476,iJR904.b2476,iLF82_1304.LF82_1775,iNRG857_1313.NRG857_12360,iSFV_1184.SFV_2521,iSF_1195.SF2519,iSFxv_1172.SFxv_2773,iS_1188.S2669,iSbBS512_1146.SbBS512_E2848,iUMNK88_1353.UMNK88_3071,iWFL_1372.ECW_m2698,iY75_1357.Y75_RS12925,iYL1228.KPN_02810,iZ_1308.Z3735 Bacteria 1TP11@1239,4H9U8@91061,COG0152@1,COG0152@2 NA|NA|NA F Belongs to the SAICAR synthetase family IIAPBPCI_00463 264199.stu0031 0.0 2408.6 Bacilli purL 6.3.5.3 ko:K01952 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 M00048 R04463 RC00010,RC01160 ko00000,ko00001,ko00002,ko01000 Bacteria 1TPAS@1239,4HB3N@91061,COG0046@1,COG0046@2,COG0047@1,COG0047@2 NA|NA|NA F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL IIAPBPCI_00464 435842.HMPREF0848_01956 8.6e-273 945.7 Bacilli purF GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009507,GO:0009536,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464 2.4.2.14 ko:K00764 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 M00048 R01072 RC00010,RC02724,RC02752 ko00000,ko00001,ko00002,ko01000,ko01002 iSB619.SA_RS05225 Bacteria 1TPH3@1239,4HAXU@91061,COG0034@1,COG0034@2 NA|NA|NA F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine IIAPBPCI_00465 904306.HMPREF9192_0010 3.6e-188 664.1 Bacilli purM GO:0003674,GO:0003824,GO:0004641,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016882,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.3.1,6.3.4.13 ko:K01933,ko:K11788 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 M00048 R04144,R04208 RC00090,RC00166,RC01100 ko00000,ko00001,ko00002,ko01000 iAF987.Gmet_1844,iECSF_1327.ECSF_2340 Bacteria 1TP9J@1239,4HABW@91061,COG0150@1,COG0150@2 NA|NA|NA F Phosphoribosylformylglycinamidine cyclo-ligase IIAPBPCI_00466 264199.stu0034 5.2e-101 373.6 Bacilli purN 2.1.2.2 ko:K11175 ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130 M00048 R04325,R04326 RC00026,RC00197,RC01128 ko00000,ko00001,ko00002,ko01000 Bacteria 1V3RJ@1239,4HGY5@91061,COG0299@1,COG0299@2 NA|NA|NA F Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate IIAPBPCI_00467 264199.stu0035 1.4e-292 1011.5 Bacilli purH GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0044464,GO:0071944 2.1.2.3,3.5.4.10 ko:K00602 ko00230,ko00670,ko01100,ko01110,ko01130,ko01523,map00230,map00670,map01100,map01110,map01130,map01523 M00048 R01127,R04560 RC00026,RC00263,RC00456 ko00000,ko00001,ko00002,ko01000,ko04147 iJN678.purH Bacteria 1TPQ5@1239,4H9YY@91061,COG0138@1,COG0138@2 NA|NA|NA F Bifunctional purine biosynthesis protein PurH IIAPBPCI_00468 322159.STER_0055 5.1e-78 297.0 Bacteria ko:K07483 ko00000 Bacteria COG2963@1,COG2963@2 NA|NA|NA L transposase activity IIAPBPCI_00469 264199.stu0206 7.2e-31 139.8 Bacteria ko:K07497 ko00000 Bacteria COG2801@1,COG2801@2 NA|NA|NA L transposition IIAPBPCI_00470 264199.stu0207 3.8e-31 140.2 Firmicutes ko:K07497 ko00000 Bacteria 1TQQY@1239,COG2801@1,COG2801@2 NA|NA|NA L Integrase core domain protein IIAPBPCI_00471 264199.stu0039 7.5e-160 569.7 Bacilli ko:K21471 ko00000,ko01000,ko01002,ko01011 Bacteria 1VUNU@1239,4HVY0@91061,COG3942@1,COG3942@2 NA|NA|NA S CHAP domain IIAPBPCI_00472 264199.stu0040 2e-241 841.3 Bacilli purD 6.3.4.13 ko:K01945 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 M00048 R04144 RC00090,RC00166 ko00000,ko00001,ko00002,ko01000 iSB619.SA_RS05245,iYO844.BSU06530 Bacteria 1UHN9@1239,4HA70@91061,COG0151@1,COG0151@2 NA|NA|NA F Belongs to the GARS family IIAPBPCI_00473 322159.STER_0059 4.9e-76 290.4 Bacilli purE GO:0003674,GO:0003824,GO:0004638,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0016853,GO:0016866,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034023,GO:0034641,GO:0034654,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 5.4.99.18 ko:K01588 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 M00048 R07405 RC01947 ko00000,ko00001,ko00002,ko01000 iETEC_1333.ETEC_0575,iJN746.PP_5336,iPC815.YPO3076,iUTI89_1310.UTI89_C0551 Bacteria 1V1MV@1239,4HFR7@91061,COG0041@1,COG0041@2 NA|NA|NA F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) IIAPBPCI_00474 264199.stu0042 8.5e-204 716.1 Bacilli purK 6.3.4.18 ko:K01589 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 M00048 R07404 RC01927 ko00000,ko00001,ko00002,ko01000 Bacteria 1TQCD@1239,4H9M5@91061,COG0026@1,COG0026@2 NA|NA|NA F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) IIAPBPCI_00475 264199.stu0043 2e-140 505.0 Firmicutes 1.1.1.169 ko:K00077 ko00770,ko01100,ko01110,map00770,map01100,map01110 M00119 R02472 RC00726 ko00000,ko00001,ko00002,ko01000 Bacteria 1UD8U@1239,COG1893@1,COG1893@2 NA|NA|NA H Ketopantoate reductase IIAPBPCI_00476 585203.SMSK564_1384 1.2e-32 145.2 Streptococcus mitis Bacteria 1VIUY@1239,2DZH9@1,2TPYM@28037,32VAR@2,4HZSZ@91061 NA|NA|NA IIAPBPCI_00477 264199.stu0045 3.3e-247 860.5 Bacilli purB GO:0003674,GO:0003824,GO:0004018,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016829,GO:0016840,GO:0016842,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046033,GO:0046390,GO:0046483,GO:0055086,GO:0070626,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.3.2.2 ko:K01756 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 M00048,M00049 R01083,R04559 RC00379,RC00444,RC00445 ko00000,ko00001,ko00002,ko01000 iLJ478.TM1095,iSB619.SA_RS09895 Bacteria 1TPMM@1239,4HACW@91061,COG0015@1,COG0015@2 NA|NA|NA F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily IIAPBPCI_00478 322159.STER_0065 0.0 1107.8 Bacilli argS 6.1.1.19 ko:K01887 ko00970,map00970 M00359,M00360 R03646 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Bacteria 1TPEZ@1239,4HAR3@91061,COG0018@1,COG0018@2 NA|NA|NA J Catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA IIAPBPCI_00479 322159.STER_0829 6.7e-215 753.1 Bacilli sip Bacteria 1TTJI@1239,4HDG6@91061,COG0582@1,COG0582@2 NA|NA|NA L Belongs to the 'phage' integrase family IIAPBPCI_00480 904306.HMPREF9192_0302 6e-39 167.5 Bacilli Bacteria 1VK84@1239,4ISM2@91061,COG1396@1,COG1396@2 NA|NA|NA K Helix-turn-helix IIAPBPCI_00481 904306.HMPREF9192_0303 5.5e-17 92.8 Bacilli GO:0003674,GO:0003700,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0140110,GO:1903506,GO:2000112,GO:2001141 ko:K07729 ko00000,ko03000 Bacteria 1VK99@1239,4HR9G@91061,COG1476@1,COG1476@2 NA|NA|NA K TRANSCRIPTIONal IIAPBPCI_00486 768726.HMPREF9178_1171 9e-22 109.4 Streptococcus mitis Bacteria 1UEN1@1239,29UGX@1,2TPXS@28037,30FTY@2,4IE9Y@91061 NA|NA|NA IIAPBPCI_00487 322159.STER_0820 1.7e-154 552.0 Bacteria ko:K06919 ko00000 Bacteria COG3378@1,COG3378@2 NA|NA|NA KL Phage plasmid primase P4 family IIAPBPCI_00488 322159.STER_0819 3.8e-295 1020.0 Bacilli ko:K06919 ko00000 Bacteria 1UYRX@1239,4HC06@91061,COG3378@1,COG3378@2 NA|NA|NA S DNA primase IIAPBPCI_00491 759913.SDSE_2235 2.8e-08 64.3 Streptococcus dysgalactiae group Bacteria 1MA25@119603,1TXE0@1239,29I0Q@1,304XU@2,4I6C6@91061 NA|NA|NA IIAPBPCI_00493 523794.Lebu_0405 1.1e-52 213.4 Bacteria Bacteria 2E4MT@1,32ZGR@2 NA|NA|NA IIAPBPCI_00494 264199.stu0048 8.2e-70 269.6 Bacilli argR GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0006355,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0019219,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032991,GO:0032993,GO:0043565,GO:0044212,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:2000112,GO:2001141 ko:K03402 ko00000,ko03000 Bacteria 1V1R7@1239,4HFY8@91061,COG1438@1,COG1438@2 NA|NA|NA K Regulates arginine biosynthesis genes IIAPBPCI_00495 264199.stu0049 1.5e-56 225.3 Bacilli ymcA 3.6.3.21 ko:K02028 M00236 ko00000,ko00002,ko01000,ko02000 3.A.1.3 Bacteria 1V4W0@1239,4HH6Y@91061,COG4550@1,COG4550@2 NA|NA|NA S Belongs to the UPF0342 family IIAPBPCI_00496 322159.STER_0068 0.0 1627.8 Bacilli mutS GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 ko:K03555 ko03430,map03430 ko00000,ko00001,ko03400 Bacteria 1TPRJ@1239,4HA63@91061,COG0249@1,COG0249@2 NA|NA|NA L that it carries out the mismatch recognition step. This protein has a weak ATPase activity IIAPBPCI_00497 1046629.Ssal_02119 2.3e-78 298.1 Bacilli Bacteria 1VHBQ@1239,2E0UI@1,32WBZ@2,4HRYH@91061 NA|NA|NA S Protein of unknown function (DUF3021) IIAPBPCI_00498 904306.HMPREF9192_0027 7.9e-68 263.1 Bacilli Bacteria 1VE2H@1239,4IPMG@91061,COG3279@1,COG3279@2 NA|NA|NA K LytTr DNA-binding domain IIAPBPCI_00500 322159.STER_0072 0.0 1251.1 Bacilli mutL GO:0000166,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008144,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0030554,GO:0032300,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033554,GO:0034641,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363,GO:1990391 ko:K03572 ko03430,map03430 ko00000,ko00001,ko03400 Bacteria 1TPGK@1239,4HB34@91061,COG0323@1,COG0323@2 NA|NA|NA L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex IIAPBPCI_00502 322159.STER_0074 1.7e-102 378.6 Bacilli ruvA GO:0000217,GO:0000400,GO:0000724,GO:0000725,GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003824,GO:0004386,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007154,GO:0008150,GO:0008152,GO:0009314,GO:0009378,GO:0009379,GO:0009432,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0022607,GO:0031668,GO:0032392,GO:0032508,GO:0032991,GO:0033202,GO:0033554,GO:0034641,GO:0042802,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0048476,GO:0050896,GO:0051259,GO:0051260,GO:0051262,GO:0051276,GO:0051289,GO:0051716,GO:0065003,GO:0071103,GO:0071496,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0097159,GO:0140097,GO:1901360,GO:1901363,GO:1902494 3.6.4.12 ko:K03550 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Bacteria 1V3KF@1239,4HHI5@91061,COG0632@1,COG0632@2 NA|NA|NA L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB IIAPBPCI_00503 322159.STER_0075 7.8e-105 386.3 Bacilli tag 3.2.2.20 ko:K01246 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Bacteria 1V9B8@1239,4HJ4I@91061,COG2818@1,COG2818@2 NA|NA|NA L 3-methyladenine DNA glycosylase IIAPBPCI_00504 322159.STER_0076 1e-229 802.4 Bacilli cinA GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363 3.5.1.42 ko:K03742,ko:K03743 ko00760,map00760 R02322 RC00100 ko00000,ko00001,ko01000 Bacteria 1TQ1N@1239,4HATN@91061,COG1058@1,COG1058@2,COG1546@1,COG1546@2 NA|NA|NA S Belongs to the CinA family IIAPBPCI_00505 322159.STER_0077 4.7e-205 720.3 Bacilli recA GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0008152,GO:0009292,GO:0009294,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0030420,GO:0031668,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0044764,GO:0046483,GO:0050896,GO:0051704,GO:0051716,GO:0071496,GO:0071704,GO:0090304,GO:1901360 ko:K03553 ko03440,map03440 M00729 ko00000,ko00001,ko00002,ko03400 Bacteria 1TPD5@1239,4HAG5@91061,COG0468@1,COG0468@2 NA|NA|NA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage IIAPBPCI_00506 264199.stu0061 2.3e-66 258.1 Bacilli spxA_2 1.20.4.1 ko:K00537,ko:K16509 ko00000,ko01000 Bacteria 1VYBB@1239,4HWYC@91061,COG1393@1,COG1393@2 NA|NA|NA P Belongs to the ArsC family IIAPBPCI_00512 1198676.SMUGS5_00840 2.6e-10 69.7 Firmicutes Bacteria 1VP0T@1239,2EG8N@1,33A0G@2 NA|NA|NA IIAPBPCI_00515 1123309.AQYB01000022_gene40 1.9e-07 60.1 Bacilli Bacteria 1VNP3@1239,2ED1A@1,336Y8@2,4HRCX@91061 NA|NA|NA IIAPBPCI_00520 322159.STER_0095 0.0 2907.5 Bacilli polC GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.7.7.7 ko:K02342,ko:K03763 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Bacteria 1TPAG@1239,4H9RF@91061,COG2176@1,COG2176@2 NA|NA|NA L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity IIAPBPCI_00521 264199.stu0063 2.8e-235 820.8 Bacilli pepS ko:K19689 ko00000,ko01000,ko01002 Bacteria 1TP65@1239,4H9W8@91061,COG2309@1,COG2309@2 NA|NA|NA E COG2309 Leucyl aminopeptidase (aminopeptidase T) IIAPBPCI_00522 264199.stu0064 1.6e-35 154.8 Bacteria XK27_02060 Bacteria COG2261@1,COG2261@2 NA|NA|NA S Transglycosylase associated protein IIAPBPCI_00523 264199.stu0065 4.4e-55 220.3 Bacteria badR ko:K15973 ko00000,ko03000 Bacteria COG1846@1,COG1846@2 NA|NA|NA K DNA-binding transcription factor activity IIAPBPCI_00524 264199.stu0066 6e-97 360.1 Firmicutes ko:K19784 ko00000 Bacteria 1VAI8@1239,COG0431@1,COG0431@2 NA|NA|NA S reductase IIAPBPCI_00525 322159.STER_0101 1.2e-32 145.2 Firmicutes ko:K07497 ko00000 Bacteria 1TQQY@1239,COG2801@1,COG2801@2 NA|NA|NA L Integrase core domain protein IIAPBPCI_00527 1116231.SMA_2094 1.5e-172 612.1 Bacilli yocD 3.4.17.13 ko:K01297 ko00000,ko01000,ko01002,ko01011 Bacteria 1TRBB@1239,4HB1P@91061,COG1619@1,COG1619@2 NA|NA|NA V proteins, homologs of microcin C7 resistance protein MccF IIAPBPCI_00529 264199.stu0073 3.7e-137 494.2 Bacilli rpsB GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030312,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046872,GO:0046914,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02967 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1TPNA@1239,4H9N5@91061,COG0052@1,COG0052@2 NA|NA|NA J Belongs to the universal ribosomal protein uS2 family IIAPBPCI_00530 264199.stu0074 3e-182 644.4 Bacilli tsf GO:0001871,GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005085,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009986,GO:0009987,GO:0010467,GO:0019538,GO:0019899,GO:0030246,GO:0030247,GO:0034641,GO:0034645,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0051020,GO:0065007,GO:0065009,GO:0071704,GO:0097159,GO:0098772,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:2001065 ko:K02357 ko00000,ko03012,ko03029 Bacteria 1TPFJ@1239,4HBDV@91061,COG0264@1,COG0264@2 NA|NA|NA J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome IIAPBPCI_00531 322159.STER_0107 9.3e-83 312.8 Bacilli Bacteria 1V3UW@1239,4HPN6@91061,COG2426@1,COG2426@2 NA|NA|NA S Putative small multi-drug export protein IIAPBPCI_00532 264199.stu0076 6.2e-76 290.0 Bacilli ctsR GO:0006950,GO:0008150,GO:0010035,GO:0010038,GO:0042221,GO:0046686,GO:0046688,GO:0050896,GO:0097501,GO:1990169,GO:1990170 ko:K03708 ko00000,ko03000 Bacteria 1VAXT@1239,4HIFT@91061,COG4463@1,COG4463@2 NA|NA|NA K Belongs to the CtsR family IIAPBPCI_00533 264199.stu0077 0.0 1551.2 Bacilli clpC GO:0006950,GO:0008150,GO:0010035,GO:0010038,GO:0042221,GO:0046686,GO:0046688,GO:0050896,GO:0097501,GO:1990169,GO:1990170 ko:K03696 ko01100,map01100 ko00000,ko03110 Bacteria 1TPMU@1239,4HACY@91061,COG0542@1,COG0542@2 NA|NA|NA O Belongs to the ClpA ClpB family IIAPBPCI_00534 264199.stu0078 5.6e-129 467.2 Bacilli dacA GO:0003674,GO:0003824,GO:0004175,GO:0004180,GO:0004185,GO:0005575,GO:0005618,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0008238,GO:0009002,GO:0016787,GO:0017171,GO:0019538,GO:0030312,GO:0043170,GO:0044238,GO:0044464,GO:0070008,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564 3.4.16.4 ko:K01286,ko:K07258 ko00550,ko01100,map00550,map01100 ko00000,ko00001,ko01000,ko01002,ko01011 Bacteria 1TQN0@1239,4HBD4@91061,COG1686@1,COG1686@2 NA|NA|NA M Belongs to the peptidase S11 family IIAPBPCI_00535 904306.HMPREF9192_0524 3.9e-59 234.2 Bacilli dacA GO:0003674,GO:0003824,GO:0004175,GO:0004180,GO:0004185,GO:0005575,GO:0005618,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0008238,GO:0009002,GO:0016787,GO:0017171,GO:0019538,GO:0030312,GO:0043170,GO:0044238,GO:0044464,GO:0070008,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564 3.4.16.4 ko:K01286,ko:K07258 ko00550,ko01100,map00550,map01100 ko00000,ko00001,ko01000,ko01002,ko01011 Bacteria 1TQN0@1239,4HBD4@91061,COG1686@1,COG1686@2 NA|NA|NA M Belongs to the peptidase S11 family IIAPBPCI_00536 322159.STER_0113 2.1e-230 804.7 Bacilli dacA GO:0003674,GO:0003824,GO:0004175,GO:0004180,GO:0004185,GO:0005575,GO:0005618,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0008238,GO:0009002,GO:0016787,GO:0017171,GO:0019538,GO:0030312,GO:0043170,GO:0044238,GO:0044464,GO:0070008,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564 3.4.16.4 ko:K01286,ko:K07258 ko00550,ko01100,map00550,map01100 ko00000,ko00001,ko01000,ko01002,ko01011 Bacteria 1TQN0@1239,4HBD4@91061,COG1686@1,COG1686@2 NA|NA|NA M Belongs to the peptidase S11 family IIAPBPCI_00537 264199.stu0081 0.0 1352.4 Bacilli pnp GO:0000166,GO:0000175,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004518,GO:0004527,GO:0004532,GO:0004540,GO:0004654,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0006950,GO:0008144,GO:0008150,GO:0008152,GO:0008408,GO:0009056,GO:0009057,GO:0009266,GO:0009408,GO:0009628,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016020,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0016796,GO:0016896,GO:0017076,GO:0019001,GO:0019222,GO:0019439,GO:0030312,GO:0030551,GO:0032553,GO:0032555,GO:0032561,GO:0034641,GO:0034655,GO:0035438,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0050896,GO:0060255,GO:0065007,GO:0071704,GO:0071944,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0097159,GO:0097367,GO:0140098,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901575 2.7.7.8 ko:K00962 ko00230,ko00240,ko03018,map00230,map00240,map03018 M00394 R00437,R00438,R00439,R00440 RC02795 ko00000,ko00001,ko00002,ko01000,ko03016,ko03019 Bacteria 1TQDW@1239,4H9Z3@91061,COG1185@1,COG1185@2 NA|NA|NA J Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction IIAPBPCI_00538 322159.STER_0115 5e-142 510.4 Bacilli Bacteria 1VY65@1239,2F67I@1,33YRI@2,4HXHY@91061 NA|NA|NA S SseB protein N-terminal domain IIAPBPCI_00539 264199.stu0083 1.1e-112 412.5 Bacilli cysE 2.3.1.30 ko:K00640 ko00270,ko00920,ko01100,ko01110,ko01120,ko01200,ko01230,ko05111,map00270,map00920,map01100,map01110,map01120,map01200,map01230,map05111 M00021 R00586 RC00004,RC00041 ko00000,ko00001,ko00002,ko01000 Bacteria 1TR42@1239,4HAKS@91061,COG1045@1,COG1045@2 NA|NA|NA E serine acetyltransferase IIAPBPCI_00540 264199.stu0084 6.6e-259 899.4 Bacilli cysS GO:0000166,GO:0001871,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009986,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030246,GO:0030247,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:2001065 6.1.1.16,6.3.1.13 ko:K01883,ko:K15526 ko00970,map00970 M00359,M00360 R03650 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 iECUMN_1333.ECUMN_0566,iJN746.PP_2905 Bacteria 1TP9D@1239,4HA6D@91061,COG0215@1,COG0215@2 NA|NA|NA J Belongs to the class-I aminoacyl-tRNA synthetase family IIAPBPCI_00541 264199.stu0085 6.1e-67 260.0 Bacilli mrnC GO:0003674,GO:0003824,GO:0004518,GO:0004540,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016787,GO:0016788,GO:0022613,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0140098,GO:1901360 ko:K11145 ko00000,ko01000,ko03009 Bacteria 1VA5V@1239,4HIM3@91061,COG1939@1,COG1939@2 NA|NA|NA J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc) IIAPBPCI_00544 264199.stu0088 1.1e-133 482.6 Bacilli trmH GO:0000154,GO:0000451,GO:0000453,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070039,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.185 ko:K03218,ko:K03437,ko:K12952 ko00000,ko01000,ko03009,ko03016 3.A.3.23 Bacteria 1TP9G@1239,4HBBI@91061,COG0566@1,COG0566@2 NA|NA|NA J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family IIAPBPCI_00545 264199.stu0089 1.6e-91 342.0 Bacilli yacP ko:K06962 ko00000 Bacteria 1V9XR@1239,4HFW4@91061,COG3688@1,COG3688@2 NA|NA|NA S RNA-binding protein containing a PIN domain IIAPBPCI_00546 264199.stu0090 9.8e-155 552.7 Bacilli degV Bacteria 1TQDI@1239,4HAYQ@91061,COG1307@1,COG1307@2 NA|NA|NA S DegV family IIAPBPCI_00548 411460.RUMTOR_00063 4.7e-32 144.4 Clostridia Bacteria 1VK84@1239,24UEE@186801,COG1396@1,COG1396@2 NA|NA|NA K helix-turn-helix IIAPBPCI_00549 264199.stu0092 4.8e-179 633.6 Bacilli panE 1.1.1.169 ko:K00077 ko00770,ko01100,ko01110,map00770,map01100,map01110 M00119 R02472 RC00726 ko00000,ko00001,ko00002,ko01000 Bacteria 1TSZ1@1239,4HB4T@91061,COG1893@1,COG1893@2 NA|NA|NA H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid IIAPBPCI_00550 1046629.Ssal_02077 2e-79 301.6 Bacilli rplM GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006417,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015934,GO:0016020,GO:0017148,GO:0019222,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0030312,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046872,GO:0046914,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0070180,GO:0071704,GO:0071944,GO:0080090,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904,GO:2000112,GO:2000113 ko:K02871 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1V3HX@1239,4HG0I@91061,COG0102@1,COG0102@2 NA|NA|NA J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly IIAPBPCI_00551 264199.stu0094 2.8e-64 251.1 Bacilli rpsI GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02996 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1V3MQ@1239,4HH3B@91061,COG0103@1,COG0103@2 NA|NA|NA J Belongs to the universal ribosomal protein uS9 family IIAPBPCI_00552 469609.HMPREF0847_00371 3.1e-223 780.8 Bacilli int2 Bacteria 1TRCD@1239,4HDUS@91061,COG0582@1,COG0582@2 NA|NA|NA L Belongs to the 'phage' integrase family IIAPBPCI_00553 469609.HMPREF0847_00372 4.9e-41 173.3 Bacilli Bacteria 1VQRI@1239,2DS5K@1,33ENA@2,4HSSZ@91061 NA|NA|NA S Helix-turn-helix domain IIAPBPCI_00554 469609.HMPREF0847_00373 4.1e-200 703.7 Bacilli ko:K07467 ko00000 Bacteria 1V0X4@1239,4HF5X@91061,COG2946@1,COG2946@2 NA|NA|NA L Replication initiation factor IIAPBPCI_00555 585204.SMSK597_1428 2.6e-36 158.3 Streptococcus mitis Bacteria 1U4K6@1239,2DKDH@1,2TQ0T@28037,3097S@2,4IEBY@91061 NA|NA|NA IIAPBPCI_00556 997830.HMPREF1124_0514 1e-06 60.1 Streptococcus infantis Bacteria 1TWJP@1239,2DIZ4@1,304E2@2,43GFM@68892,4I5D7@91061 NA|NA|NA IIAPBPCI_00557 469609.HMPREF0847_00376 3.2e-101 374.4 Firmicutes Bacteria 1VKX5@1239,COG1396@1,COG1396@2 NA|NA|NA K DNA-binding helix-turn-helix protein IIAPBPCI_00558 469609.HMPREF0847_00377 8.4e-38 162.5 Bacilli ko:K20373 ko02024,map02024 ko00000,ko00001,ko03000 Bacteria 1VBRX@1239,4HMPG@91061,COG1396@1,COG1396@2 NA|NA|NA K Transcriptional activator, Rgg GadR MutR family IIAPBPCI_00559 469609.HMPREF0847_00377 8.8e-88 329.7 Bacilli ko:K20373 ko02024,map02024 ko00000,ko00001,ko03000 Bacteria 1VBRX@1239,4HMPG@91061,COG1396@1,COG1396@2 NA|NA|NA K Transcriptional activator, Rgg GadR MutR family IIAPBPCI_00563 469609.HMPREF0847_00380 9.7e-155 552.7 Bacilli ko:K01990 M00254 ko00000,ko00002,ko02000 3.A.1 Bacteria 1TPZR@1239,4HUQD@91061,COG1131@1,COG1131@2 NA|NA|NA V AAA domain, putative AbiEii toxin, Type IV TA system IIAPBPCI_00564 1545701.LACWKB10_1400 2.5e-70 271.9 Lactobacillaceae Bacteria 1U7PC@1239,29Q8I@1,30B7J@2,3F9Z8@33958,4IHKP@91061 NA|NA|NA S ABC-2 family transporter protein IIAPBPCI_00565 1545701.LACWKB10_1399 2.8e-13 80.5 Lactobacillaceae Bacteria 1U8A1@1239,2BA4E@1,323IA@2,3FARB@33958,4II7Z@91061 NA|NA|NA IIAPBPCI_00566 904306.HMPREF9192_0491 9.1e-223 779.2 Bacilli capA ko:K07282 ko00000 Bacteria 1UZW4@1239,4HBC3@91061,COG2843@1,COG2843@2 NA|NA|NA M Bacterial capsule synthesis protein IIAPBPCI_00567 264199.stu0112 1.4e-38 165.2 Bacilli gcvR ko:K07166 ko00000 Bacteria 1VENW@1239,4HNJ4@91061,COG3830@1,COG3830@2 NA|NA|NA T UPF0237 protein IIAPBPCI_00568 264199.stu0113 8.7e-243 845.9 Bacilli XK27_08635 ko:K09157 ko00000 Bacteria 1TQG8@1239,4HBTU@91061,COG2848@1,COG2848@2 NA|NA|NA S UPF0210 protein IIAPBPCI_00569 322159.STER_0158 1.5e-129 468.8 Bacilli ais Bacteria 1VDCB@1239,4HJ9X@91061,COG0406@1,COG0406@2 NA|NA|NA G Phosphoglycerate mutase IIAPBPCI_00570 264199.stu0116 1.3e-137 495.7 Bacilli vanY 3.4.17.14 ko:K07260 ko00550,ko01100,ko01502,ko02020,map00550,map01100,map01502,map02020 M00651 ko00000,ko00001,ko00002,ko01000,ko01002,ko01011,ko01504 Bacteria 1V1F7@1239,4HBR1@91061,COG1876@1,COG1876@2 NA|NA|NA M D-alanyl-D-alanine carboxypeptidase IIAPBPCI_00571 264199.stu0117 1.4e-99 369.0 Bacteria acmA 3.2.1.17 ko:K01185,ko:K02395 ko00000,ko01000,ko02035 Bacteria COG1705@1,COG1705@2 NA|NA|NA NU amidase activity IIAPBPCI_00572 264199.stu0118 5.4e-195 686.8 Bacilli hrcA GO:0005575,GO:0005623,GO:0005886,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016020,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0044464,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 ko:K03705 ko00000,ko03000 Bacteria 1TQP7@1239,4HAX5@91061,COG1420@1,COG1420@2 NA|NA|NA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons IIAPBPCI_00573 322159.STER_0162 3.6e-67 261.2 Bacilli grpE GO:0000166,GO:0000774,GO:0001871,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006950,GO:0007154,GO:0008150,GO:0009266,GO:0009267,GO:0009408,GO:0009605,GO:0009628,GO:0009986,GO:0009987,GO:0009991,GO:0016043,GO:0017076,GO:0019904,GO:0022607,GO:0030234,GO:0030246,GO:0030247,GO:0030312,GO:0030554,GO:0031667,GO:0031668,GO:0031669,GO:0032991,GO:0033554,GO:0036094,GO:0040007,GO:0042594,GO:0042802,GO:0042803,GO:0043933,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0046983,GO:0050790,GO:0050896,GO:0051082,GO:0051716,GO:0060589,GO:0060590,GO:0065003,GO:0065007,GO:0065009,GO:0071496,GO:0071840,GO:0071944,GO:0097159,GO:0098772,GO:1901265,GO:1901363,GO:2001065 ko:K03687 ko00000,ko03029,ko03110 Bacteria 1V6G2@1239,4HIRK@91061,COG0576@1,COG0576@2 NA|NA|NA O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ IIAPBPCI_00574 322159.STER_0163 4.6e-287 993.4 Bacilli dnaK GO:0001871,GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0008150,GO:0009986,GO:0030246,GO:0030247,GO:0044464,GO:0051704,GO:0098630,GO:0098743,GO:2001065 ko:K04043 ko03018,ko04212,ko05152,map03018,map04212,map05152 ko00000,ko00001,ko03019,ko03029,ko03110,ko04147 1.A.33.1 Bacteria 1TP1J@1239,4HA9S@91061,COG0443@1,COG0443@2 NA|NA|NA O Heat shock 70 kDa protein IIAPBPCI_00575 322159.STER_0164 4.5e-184 650.6 Bacilli dnaJ ko:K03686 ko00000,ko03029,ko03110 Bacteria 1TP00@1239,4H9KA@91061,COG0484@1,COG0484@2 NA|NA|NA O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins IIAPBPCI_00576 264199.stu0122 3.6e-137 494.2 Bacilli truA GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 ko:K06173 ko00000,ko01000,ko03016 Bacteria 1TQUY@1239,4HCFI@91061,COG0101@1,COG0101@2 NA|NA|NA J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs IIAPBPCI_00577 264199.stu0123 3.1e-136 491.1 Bacilli thiD 2.7.1.35,2.7.1.49,2.7.4.7 ko:K00868,ko:K00941 ko00730,ko00750,ko01100,map00730,map00750,map01100 M00127 R00174,R01909,R02493,R03471,R04509 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 Bacteria 1TQ4A@1239,4H9PP@91061,COG0351@1,COG0351@2 NA|NA|NA H phosphomethylpyrimidine kinase IIAPBPCI_00578 1046629.Ssal_02049 9.6e-72 276.2 Bacilli hmpT GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 Bacteria 1VBBN@1239,4HNM0@91061,COG4720@1,COG4720@2 NA|NA|NA S cog cog4720 IIAPBPCI_00581 322159.STER_0151 9e-215 752.7 Firmicutes ko:K07485 ko00000 Bacteria 1TQ93@1239,COG3464@1,COG3464@2 NA|NA|NA L Transposase IIAPBPCI_00582 1046629.Ssal_02044 1.6e-77 295.4 Bacteria sigH ko:K03088,ko:K03091,ko:K12296 ko02020,ko02024,map02020,map02024 ko00000,ko00001,ko03000,ko03021 Bacteria COG1595@1,COG1595@2 NA|NA|NA K DNA-templated transcription, initiation IIAPBPCI_00583 264199.stu0131 1.6e-146 525.4 Bacilli ykuT GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0006810,GO:0006950,GO:0006970,GO:0008150,GO:0008381,GO:0009628,GO:0009987,GO:0015267,GO:0022803,GO:0022836,GO:0022857,GO:0033554,GO:0042802,GO:0050896,GO:0051179,GO:0051234,GO:0051716,GO:0055085,GO:0071214,GO:0071470,GO:0104004 ko:K22044 ko00000,ko02000 1.A.23.3 Bacteria 1TR9Z@1239,4HCB8@91061,COG0668@1,COG0668@2 NA|NA|NA M mechanosensitive ion channel IIAPBPCI_00584 322159.STER_0191 6.4e-219 766.5 Bacilli tig GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 ko:K03545 ko00000 Bacteria 1TQQ8@1239,4H9Q8@91061,COG0544@1,COG0544@2 NA|NA|NA D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase IIAPBPCI_00585 322159.STER_0192 4.8e-73 280.8 Bacilli rpoE GO:0003674,GO:0003824,GO:0003899,GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 ko:K03048 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 M00183 R00435,R00441,R00442,R00443 RC02795 br01611,ko00000,ko00001,ko00002,ko03021,ko03400 Bacteria 1V6WX@1239,4HIUK@91061,COG3343@1,COG3343@2 NA|NA|NA K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling IIAPBPCI_00586 264199.stu0134 7.6e-310 1068.9 Bacilli pyrG GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0044464,GO:0071944 6.3.4.2 ko:K01937 ko00240,ko01100,map00240,map01100 M00052 R00571,R00573 RC00010,RC00074 ko00000,ko00001,ko00002,ko01000 iHN637.CLJU_RS01075,iNJ661.Rv1699 Bacteria 1TP34@1239,4H9X6@91061,COG0504@1,COG0504@2 NA|NA|NA F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates IIAPBPCI_00587 264199.stu0135 4.2e-83 313.9 Bacilli XK27_03960 Bacteria 1VFZQ@1239,2E0MY@1,32W75@2,4HKWR@91061 NA|NA|NA S Protein of unknown function (DUF3013) IIAPBPCI_00588 264199.stu0136 3.4e-19 100.1 Bacilli mutT3 3.6.1.13,3.6.1.55 ko:K01515,ko:K03574 ko00230,map00230 R01054 RC00002 ko00000,ko00001,ko01000,ko03400 Bacteria 1V8D5@1239,4HJKW@91061,COG0494@1,COG0494@2 NA|NA|NA L NUDIX domain IIAPBPCI_00589 996306.SSUR61_1159 5.2e-20 102.8 Streptococcus suis Bacteria 1U94R@1239,1WTRT@1307,2AMGJ@1,31CC5@2,4IJ5U@91061 NA|NA|NA IIAPBPCI_00590 1214217.ALNF01000064_gene2086 5.8e-141 506.9 Streptococcus suis repA Bacteria 1VHQA@1239,1WSPT@1307,2DP1C@1,3304N@2,4HPY6@91061 NA|NA|NA S Replication initiator protein A (RepA) N-terminus IIAPBPCI_00591 1154860.SAG0136_10340 3.3e-258 897.1 Bacilli hpaIIM 2.1.1.37 ko:K00558 ko00270,ko01100,ko05206,map00270,map01100,map05206 M00035 R04858 RC00003,RC00332 ko00000,ko00001,ko00002,ko01000,ko02048,ko03032,ko03036 Bacteria 1TPNE@1239,4HB9C@91061,COG0270@1,COG0270@2 NA|NA|NA H cytosine-specific methyltransferase IIAPBPCI_00592 1214166.ALLG01000025_gene1239 1.4e-74 285.4 Streptococcus suis XK27_00590 Bacteria 1W4PT@1239,1WTD4@1307,2EV5A@1,33NK4@2,4IJ1G@91061 NA|NA|NA IIAPBPCI_00593 1214166.ALLG01000025_gene1238 1e-63 249.2 Streptococcus suis XK27_00585 Bacteria 1U91V@1239,1WTGJ@1307,30C2H@2,4IJ24@91061,COG1393@1 NA|NA|NA P arsenate reductase (glutaredoxin) activity IIAPBPCI_00594 996306.SSUR61_1154 1.5e-36 158.3 Streptococcus suis XK27_00580 Bacteria 1U945@1239,1WTQF@1307,2AMF1@1,31CAH@2,4IJ54@91061 NA|NA|NA IIAPBPCI_00595 996306.SSUR61_1153 1e-91 342.8 Streptococcus suis ypbD ko:K07052 ko00000 Bacteria 1W5XP@1239,1WSW7@1307,4I0RW@91061,COG1266@1,COG1266@2 NA|NA|NA S CAAX protease self-immunity IIAPBPCI_00596 1214166.ALLG01000025_gene1235 1.3e-79 302.4 Streptococcus suis XK27_00570 Bacteria 1U8XR@1239,1WSKJ@1307,29QYR@1,30BZR@2,4IIWI@91061 NA|NA|NA IIAPBPCI_00597 391295.SSU05_0973 0.0 1203.7 Streptococcus suis traG ko:K03205 ko03070,map03070 M00333 ko00000,ko00001,ko00002,ko02044 3.A.7 Bacteria 1UAJF@1239,1WT6H@1307,4IPX4@91061,COG3505@1,COG3505@2 NA|NA|NA U Type IV secretory system Conjugative DNA transfer IIAPBPCI_00598 1214166.ALLG01000025_gene1233 9.2e-34 149.1 Streptococcus suis XK27_00560 Bacteria 1W4XR@1239,1WTPF@1307,295KB@1,2ZSXU@2,4I17I@91061 NA|NA|NA IIAPBPCI_00599 910313.HMPREF9320_1729 2.6e-139 501.5 Bacilli Bacteria 1VY42@1239,2EFFF@1,33986@2,4HMPN@91061 NA|NA|NA IIAPBPCI_00600 1214217.ALNF01000064_gene2075 1.5e-61 241.9 Streptococcus suis XK27_00550 Bacteria 1U92M@1239,1WTK7@1307,2AMBF@1,31C6I@2,4IJ34@91061 NA|NA|NA S PrgI family protein IIAPBPCI_00601 996306.SSUR61_1147 0.0 1467.2 Streptococcus suis Bacteria 1TPDR@1239,1WSV1@1307,4HUB9@91061,COG3451@1,COG3451@2 NA|NA|NA U 'COG3451 Type IV secretory pathway, VirB4 components' IIAPBPCI_00602 1214217.ALNF01000037_gene383 0.0 1617.8 Streptococcus suis XK27_00530 Bacteria 1VPFZ@1239,1WSSZ@1307,4HFGV@91061,COG3942@1,COG3942@2 NA|NA|NA S CHAP domain IIAPBPCI_00603 1123315.AUIP01000021_gene2249 6e-149 533.5 Bacilli Bacteria 1TSFX@1239,4HGAF@91061,COG2253@1,COG2253@2 NA|NA|NA S Nucleotidyl transferase AbiEii toxin, Type IV TA system IIAPBPCI_00604 1123314.AUIO01000002_gene1898 6.8e-107 393.3 Bacilli abiGI Bacteria 1V8GF@1239,4IQTV@91061,COG5340@1,COG5340@2 NA|NA|NA K Transcriptional regulator, AbiEi antitoxin IIAPBPCI_00605 1123315.AUIP01000021_gene2251 0.0 2852.0 Bacilli XK27_00515 Bacteria 1TSVF@1239,4HGKU@91061,COG3087@1,COG3087@2 NA|NA|NA D Glucan-binding protein C IIAPBPCI_00606 996306.SSUR61_1140 5.1e-11 73.2 Streptococcus suis XK27_00510 Bacteria 1U94D@1239,1WTR2@1307,29R2E@1,30C3I@2,4IJ5D@91061 NA|NA|NA IIAPBPCI_00607 996306.SSUR61_1139 7.8e-89 333.2 Streptococcus suis XK27_00505 Bacteria 1U906@1239,1WT7S@1307,2BQP9@1,32JJP@2,4IJ00@91061 NA|NA|NA IIAPBPCI_00608 391295.SSU05_0962 0.0 3371.6 Streptococcus suis XK27_00500 Bacteria 1TPQA@1239,1WSVK@1307,4HDHN@91061,COG0553@1,COG0553@2,COG0827@1,COG0827@2,COG4646@1,COG4646@2 NA|NA|NA L SNF2 family N-terminal domain IIAPBPCI_00609 1154860.SAG0136_11725 0.0 1177.2 Bacilli Bacteria 1TP9A@1239,4H9NW@91061,COG3344@1,COG3344@2 NA|NA|NA L reverse transcriptase IIAPBPCI_00610 1214166.ALLG01000025_gene1222 8.1e-241 839.3 Streptococcus suis XK27_00500 Bacteria 1TPQA@1239,1WSVK@1307,4HDHN@91061,COG0553@1,COG0553@2,COG0827@1,COG0827@2,COG4646@1,COG4646@2 NA|NA|NA L SNF2 family N-terminal domain IIAPBPCI_00611 996306.SSUR61_1133 2.4e-44 184.5 Streptococcus suis Bacteria 1U93N@1239,1WTP6@1307,29R24@1,30C38@2,4IJ4F@91061 NA|NA|NA IIAPBPCI_00612 1214217.ALNF01000037_gene359 2.3e-31 141.4 Streptococcus suis Bacteria 1U94C@1239,1WTR0@1307,2AMFB@1,31CAV@2,4IJ5B@91061 NA|NA|NA IIAPBPCI_00613 1302863.I872_10320 5.3e-45 189.1 Bacteria Bacteria COG3593@1,COG3593@2 NA|NA|NA L DNA synthesis involved in DNA repair IIAPBPCI_00614 1302863.I872_10315 3.5e-18 99.8 Bacteria ko:K07451 ko00000,ko01000,ko02048 Bacteria COG1403@1,COG1403@2 NA|NA|NA V endonuclease activity IIAPBPCI_00615 663952.SDD27957_05275 9.9e-104 382.9 Bacteria XK27_10865 Bacteria 2DCG5@1,2ZE0K@2 NA|NA|NA IIAPBPCI_00616 1154860.SAG0136_11645 2.7e-11 73.9 Bacilli ko:K02316 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 Bacteria 1TRTK@1239,4HK3Y@91061,COG0358@1,COG0358@2 NA|NA|NA L Protein of unknown function (DUF3991) IIAPBPCI_00617 1214217.ALNF01000037_gene354 1.3e-149 535.8 Streptococcus suis ko:K02316 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 Bacteria 1TRTK@1239,1WT2U@1307,4HK3Y@91061,COG0358@1,COG0358@2 NA|NA|NA L Toprim-like IIAPBPCI_00618 1214166.ALLG01000025_gene1207 1.1e-17 95.5 Streptococcus suis XK27_10875 Bacteria 1U946@1239,1WTQH@1307,2BFJD@1,329DD@2,4IJ55@91061 NA|NA|NA IIAPBPCI_00619 1214166.ALLG01000025_gene1206 2.9e-58 231.1 Streptococcus suis XK27_10880 Bacteria 1U91T@1239,1WTG8@1307,2AMA9@1,31C58@2,4IJ22@91061 NA|NA|NA IIAPBPCI_00620 391295.SSU05_0938 2.3e-39 167.9 Streptococcus suis Bacteria 1U93B@1239,1WTNM@1307,2BV34@1,32QG3@2,4IJ43@91061 NA|NA|NA IIAPBPCI_00621 1214166.ALLG01000002_gene1720 1.1e-281 975.7 Streptococcus suis Bacteria 1TPFS@1239,1WTYV@1307,4H9V9@91061,COG3039@1,COG3039@2 NA|NA|NA L Transposase DDE domain IIAPBPCI_00622 482234.SCAZ3_06005 2.6e-130 471.5 Bacilli 2.7.1.176 ko:K07452,ko:K16214 ko00000,ko01000,ko02048 Bacteria 1V4WZ@1239,4HKUZ@91061,COG0542@1,COG0542@2 NA|NA|NA O Zeta toxin IIAPBPCI_00623 1408445.JHXP01000009_gene2758 5.8e-40 171.4 Gammaproteobacteria vrlR Bacteria 1RAX0@1224,1S35B@1236,2C2MI@1,2ZBMN@2 NA|NA|NA S Domain of unknown function (DUF1837) IIAPBPCI_00624 525254.HMPREF0072_2204 2.3e-190 672.9 Clostridia vrlS Bacteria 1U9TG@1239,25FHQ@186801,COG1204@1,COG1204@2 NA|NA|NA L DEAD DEAH box helicase IIAPBPCI_00625 158189.SpiBuddy_2398 8.9e-49 200.7 Bacteria Bacteria COG1715@1,COG1715@2 NA|NA|NA V Restriction endonuclease IIAPBPCI_00626 996306.SSUR61_1124 1.7e-52 211.8 Streptococcus suis Bacteria 1W52Y@1239,1WTSJ@1307,2BWBR@1,2ZDFR@2,4I0XT@91061 NA|NA|NA IIAPBPCI_00627 996306.SSUR61_1123 2.1e-50 204.9 Streptococcus suis Bacteria 1U93J@1239,1WTP2@1307,2BFHJ@1,329BC@2,4IJ4C@91061 NA|NA|NA S Bacterial mobilisation protein (MobC) IIAPBPCI_00628 1154860.SAG0136_01820 4.1e-299 1033.5 Bacilli Bacteria 1V2SB@1239,4HFEX@91061,COG3843@1,COG3843@2 NA|NA|NA U relaxase IIAPBPCI_00629 862967.SIR_1156 1.2e-19 102.8 Streptococcus anginosus group Bacteria 1TVNN@1239,2CM4R@1,303ZT@2,42DKI@671232,4I3R0@91061 NA|NA|NA IIAPBPCI_00630 1297534.CAUJ01000007_gene1490 3.3e-21 107.8 Bacteria blpS Bacteria COG3279@1,COG3279@2 NA|NA|NA KT phosphorelay signal transduction system IIAPBPCI_00631 1321372.AQQB01000055_gene1644 2.6e-103 381.7 Streptococcus suis blpR ko:K07707 ko02020,ko02024,map02020,map02024 M00495 ko00000,ko00001,ko00002,ko02022 Bacteria 1U92Z@1239,1WTMJ@1307,4IJ3N@91061,COG3279@1,COG3279@2 NA|NA|NA KT LytTr DNA-binding domain IIAPBPCI_00632 1336234.JAGN01000013_gene191 4.5e-122 444.9 Carnobacteriaceae blpH 2.7.13.3 ko:K07706 ko02020,ko02024,map02020,map02024 M00495 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Bacteria 1UYTM@1239,27HJV@186828,4I3H2@91061,COG3290@1,COG3290@2 NA|NA|NA T GHKL domain IIAPBPCI_00634 759913.SDSE_0544 1.3e-145 523.1 Streptococcus dysgalactiae group mesE GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K20345 ko02024,map02024 ko00000,ko00001,ko02000 3.A.1.112,8.A.1 Bacteria 1M9WQ@119603,1V5C8@1239,4HHKB@91061,COG0845@1,COG0845@2 NA|NA|NA M HlyD family secretion protein IIAPBPCI_00635 1123304.AQYA01000033_gene1929 0.0 1134.8 Bacilli comA ko:K06147,ko:K06148,ko:K20344 ko02010,ko02024,map02010,map02024 ko00000,ko00001,ko02000 3.A.1,3.A.1.106,3.A.1.109,3.A.1.112,3.A.1.21 Bacteria 1V77J@1239,4HAX2@91061,COG2274@1,COG2274@2 NA|NA|NA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain IIAPBPCI_00636 1005704.HMPREF9968_1217 4.3e-18 96.7 Streptococcus oralis comA ko:K06147,ko:K06148,ko:K20344 ko02010,ko02024,map02010,map02024 ko00000,ko00001,ko02000 3.A.1,3.A.1.106,3.A.1.109,3.A.1.112,3.A.1.21 Bacteria 1V77J@1239,1WNWP@1303,4HAX2@91061,COG2274@1,COG2274@2 NA|NA|NA V Papain-like cysteine protease AvrRpt2 IIAPBPCI_00637 40041.SZO_04310 1.6e-12 78.6 Bacilli Bacteria 1W3RP@1239,2DZ2R@1,34C7V@2,4HZZT@91061 NA|NA|NA S Bacteriocin class II with double-glycine leader peptide IIAPBPCI_00639 1123303.AQVD01000001_gene559 1.4e-75 289.3 Bacteria ko:K07483 ko00000 Bacteria COG2963@1,COG2963@2 NA|NA|NA L transposase activity IIAPBPCI_00640 862970.SAIN_0559 4.1e-33 147.5 Streptococcus anginosus group ko:K07497 ko00000 Bacteria 1TQQY@1239,42E57@671232,4HC8M@91061,COG2801@1,COG2801@2 NA|NA|NA L Integrase core domain IIAPBPCI_00641 1123298.KB904062_gene930 9.3e-75 286.2 Bacilli ko:K07497 ko00000 Bacteria 1TQQY@1239,4HC8M@91061,COG2801@1,COG2801@2 NA|NA|NA L Transposase and inactivated derivatives IIAPBPCI_00642 996306.SSUR61_0113 1.2e-47 197.2 Bacilli blpT Bacteria 1W6SH@1239,2DWQH@1,341F6@2,4HX74@91061 NA|NA|NA IIAPBPCI_00643 996306.SSUR61_1652 5.1e-77 294.3 Bacilli ko:K07052 ko00000 Bacteria 1VFRX@1239,4HPZB@91061,COG1266@1,COG1266@2 NA|NA|NA S CAAX protease self-immunity IIAPBPCI_00645 1154860.SAG0136_11560 6.1e-19 100.5 Firmicutes Bacteria 1V1GF@1239,COG1191@1,COG1191@2 NA|NA|NA K Psort location Cytoplasmic, score IIAPBPCI_00647 1154860.SAG0136_01740 9.2e-236 822.8 Firmicutes Bacteria 1TPA6@1239,COG1961@1,COG1961@2 NA|NA|NA L Psort location Cytoplasmic, score IIAPBPCI_00648 1154860.SAG0136_01735 1.8e-189 669.1 Firmicutes Bacteria 1TQ8Y@1239,COG1961@1,COG1961@2 NA|NA|NA L Resolvase, N-terminal domain protein IIAPBPCI_00649 862969.SCI_0845 1.7e-167 595.9 Streptococcus anginosus group Bacteria 1TSXI@1239,42E4Z@671232,4I4BM@91061,COG1961@1,COG1961@2 NA|NA|NA L Recombinase IIAPBPCI_00650 322159.STER_0195 7.3e-39 166.0 Bacilli mutT3 3.6.1.13,3.6.1.55 ko:K01515,ko:K03574 ko00230,map00230 R01054 RC00002 ko00000,ko00001,ko01000,ko03400 Bacteria 1V8D5@1239,4HJKW@91061,COG0494@1,COG0494@2 NA|NA|NA L NUDIX domain IIAPBPCI_00651 264199.stu0137 1.3e-176 625.5 Bacilli prmA ko:K02687 ko00000,ko01000,ko03009 Bacteria 1TPKI@1239,4HAMF@91061,COG2264@1,COG2264@2 NA|NA|NA J Ribosomal protein L11 methyltransferase IIAPBPCI_00652 322159.STER_0197 3.7e-134 484.2 Bacilli rsmE GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016436,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070042,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.193 ko:K09761 ko00000,ko01000,ko03009 Bacteria 1V1CT@1239,4HH8P@91061,COG1385@1,COG1385@2 NA|NA|NA J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit IIAPBPCI_00653 322159.STER_0198 1.5e-35 156.0 Bacilli cpdB GO:0003674,GO:0003824,GO:0004112,GO:0005575,GO:0005623,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008081,GO:0008150,GO:0008152,GO:0008252,GO:0008254,GO:0008663,GO:0009056,GO:0009058,GO:0009117,GO:0009166,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0030288,GO:0030313,GO:0031975,GO:0033554,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042578,GO:0042597,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 3.1.3.6,3.1.4.16 ko:K01119 ko00230,ko00240,map00230,map00240 R01562,R01877,R02148,R02370,R03537,R03538,R03929,R05135 RC00078,RC00296 ko00000,ko00001,ko01000 iEC55989_1330.EC55989_4773,iECH74115_1262.ECH74115_5730,iECNA114_1301.ECNA114_4436,iECSP_1301.ECSP_5315,iECW_1372.ECW_m4577,iECs_1301.ECs5191,iEKO11_1354.EKO11_4095,iEcE24377_1341.EcE24377A_4783,iG2583_1286.G2583_5043,iWFL_1372.ECW_m4577,iZ_1308.Z5824 Bacteria 1TPV2@1239,4HB9S@91061,COG0737@1,COG0737@2 NA|NA|NA F Belongs to the 5'-nucleotidase family IIAPBPCI_00654 322159.STER_0198 1.5e-97 362.5 Bacilli cpdB GO:0003674,GO:0003824,GO:0004112,GO:0005575,GO:0005623,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008081,GO:0008150,GO:0008152,GO:0008252,GO:0008254,GO:0008663,GO:0009056,GO:0009058,GO:0009117,GO:0009166,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0030288,GO:0030313,GO:0031975,GO:0033554,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042578,GO:0042597,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 3.1.3.6,3.1.4.16 ko:K01119 ko00230,ko00240,map00230,map00240 R01562,R01877,R02148,R02370,R03537,R03538,R03929,R05135 RC00078,RC00296 ko00000,ko00001,ko01000 iEC55989_1330.EC55989_4773,iECH74115_1262.ECH74115_5730,iECNA114_1301.ECNA114_4436,iECSP_1301.ECSP_5315,iECW_1372.ECW_m4577,iECs_1301.ECs5191,iEKO11_1354.EKO11_4095,iEcE24377_1341.EcE24377A_4783,iG2583_1286.G2583_5043,iWFL_1372.ECW_m4577,iZ_1308.Z5824 Bacteria 1TPV2@1239,4HB9S@91061,COG0737@1,COG0737@2 NA|NA|NA F Belongs to the 5'-nucleotidase family IIAPBPCI_00655 322159.STER_0198 1e-241 842.4 Bacilli cpdB GO:0003674,GO:0003824,GO:0004112,GO:0005575,GO:0005623,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008081,GO:0008150,GO:0008152,GO:0008252,GO:0008254,GO:0008663,GO:0009056,GO:0009058,GO:0009117,GO:0009166,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0030288,GO:0030313,GO:0031975,GO:0033554,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042578,GO:0042597,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 3.1.3.6,3.1.4.16 ko:K01119 ko00230,ko00240,map00230,map00240 R01562,R01877,R02148,R02370,R03537,R03538,R03929,R05135 RC00078,RC00296 ko00000,ko00001,ko01000 iEC55989_1330.EC55989_4773,iECH74115_1262.ECH74115_5730,iECNA114_1301.ECNA114_4436,iECSP_1301.ECSP_5315,iECW_1372.ECW_m4577,iECs_1301.ECs5191,iEKO11_1354.EKO11_4095,iEcE24377_1341.EcE24377A_4783,iG2583_1286.G2583_5043,iWFL_1372.ECW_m4577,iZ_1308.Z5824 Bacteria 1TPV2@1239,4HB9S@91061,COG0737@1,COG0737@2 NA|NA|NA F Belongs to the 5'-nucleotidase family IIAPBPCI_00656 264199.stu0144 5.3e-83 313.5 Bacilli nrdI ko:K03647 ko00000 Bacteria 1V71V@1239,4HIW7@91061,COG1780@1,COG1780@2 NA|NA|NA F Belongs to the NrdI family IIAPBPCI_00657 322159.STER_0200 0.0 1432.5 Bacilli relA GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0008728,GO:0008893,GO:0009116,GO:0009117,GO:0009119,GO:0009150,GO:0009259,GO:0009605,GO:0009987,GO:0009991,GO:0015969,GO:0016020,GO:0016740,GO:0016772,GO:0016778,GO:0016787,GO:0016788,GO:0016794,GO:0019637,GO:0019693,GO:0030312,GO:0031667,GO:0033865,GO:0033875,GO:0034032,GO:0034035,GO:0034641,GO:0042278,GO:0042578,GO:0042594,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0046128,GO:0046483,GO:0050896,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:1901068,GO:1901135,GO:1901360,GO:1901564,GO:1901657 2.7.6.5 ko:K00951 ko00230,map00230 R00429 RC00002,RC00078 ko00000,ko00001,ko01000 iHN637.CLJU_RS16615,iYO844.BSU27600 Bacteria 1TNYZ@1239,4HBX7@91061,COG0317@1,COG0317@2 NA|NA|NA KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance IIAPBPCI_00658 264199.stu0146 3.3e-74 284.3 Bacilli dtd GO:0002161,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051499,GO:0051500,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106026,GO:0106074,GO:0140098,GO:0140101,GO:1901360 ko:K07560 ko00000,ko01000,ko03016 Bacteria 1V6GH@1239,4HINN@91061,COG1490@1,COG1490@2 NA|NA|NA J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality IIAPBPCI_00659 1046629.Ssal_02025 2e-08 64.3 Bacilli dex 3.2.1.11 ko:K05988 ko00500,map00500 R11309 ko00000,ko00001,ko01000 GH66 Bacteria 1TS2G@1239,4HF5J@91061,COG5297@1,COG5297@2 NA|NA|NA G Glycosyl hydrolase family 66 IIAPBPCI_00660 1046629.Ssal_02025 3e-28 131.0 Bacilli dex 3.2.1.11 ko:K05988 ko00500,map00500 R11309 ko00000,ko00001,ko01000 GH66 Bacteria 1TS2G@1239,4HF5J@91061,COG5297@1,COG5297@2 NA|NA|NA G Glycosyl hydrolase family 66 IIAPBPCI_00661 1046629.Ssal_02025 2.3e-18 97.4 Bacilli dex 3.2.1.11 ko:K05988 ko00500,map00500 R11309 ko00000,ko00001,ko01000 GH66 Bacteria 1TS2G@1239,4HF5J@91061,COG5297@1,COG5297@2 NA|NA|NA G Glycosyl hydrolase family 66 IIAPBPCI_00662 435842.HMPREF0848_01478 7.7e-40 169.9 Bacilli dex 3.2.1.11 ko:K05988 ko00500,map00500 R11309 ko00000,ko00001,ko01000 GH66 Bacteria 1TS2G@1239,4HF5J@91061,COG5297@1,COG5297@2 NA|NA|NA G Glycosyl hydrolase family 66 IIAPBPCI_00663 322159.STER_0204 7.3e-236 822.8 Bacilli ilvA GO:0006082,GO:0006520,GO:0006566,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009987,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0071704,GO:1901564,GO:1901605 4.3.1.19 ko:K01754 ko00260,ko00290,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00290,map01100,map01110,map01130,map01200,map01230 M00570 R00220,R00996 RC00418,RC02600 ko00000,ko00001,ko00002,ko01000 Bacteria 1TP22@1239,4H9NK@91061,COG1171@1,COG1171@2 NA|NA|NA E Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA IIAPBPCI_00664 264199.stu0151 1.2e-111 409.1 Bacilli def GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0018193,GO:0018206,GO:0019538,GO:0031365,GO:0036211,GO:0042586,GO:0043170,GO:0043412,GO:0043686,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:1901564 3.5.1.31,3.5.1.88 ko:K01450,ko:K01462 ko00270,ko00630,map00270,map00630 R00653 RC00165,RC00323 ko00000,ko00001,ko01000 Bacteria 1V5C6@1239,4HGUI@91061,COG0242@1,COG0242@2 NA|NA|NA J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions IIAPBPCI_00665 322159.STER_0206 4.4e-112 410.6 Bacilli fnr5 Bacteria 1V2AH@1239,4HFNC@91061,COG0664@1,COG0664@2 NA|NA|NA K Catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases IIAPBPCI_00666 322159.STER_0207 7.9e-200 703.0 Bacilli yhjX ko:K03449,ko:K08177 ko00000,ko02000 2.A.1.11,2.A.1.17 Bacteria 1TSM5@1239,4HF98@91061,COG2807@1,COG2807@2 NA|NA|NA P Major Facilitator IIAPBPCI_00667 264199.stu0154 9.2e-43 179.1 Bacilli rpsO GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006139,GO:0006378,GO:0006396,GO:0006397,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0016043,GO:0016070,GO:0016071,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0031123,GO:0031124,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043631,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02956 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1VA5C@1239,4HKE9@91061,COG0184@1,COG0184@2 NA|NA|NA J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome IIAPBPCI_00668 264199.stu0155 5e-94 350.5 Bacteria Bacteria COG4767@1,COG4767@2 NA|NA|NA V VanZ like family IIAPBPCI_00671 264199.stu0158 1e-123 449.5 Bacilli glnQ ko:K17074,ko:K17076 ko02010,map02010 M00589 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.3.20 Bacteria 1TNYD@1239,4H9WY@91061,COG1126@1,COG1126@2 NA|NA|NA E abc transporter atp-binding protein IIAPBPCI_00672 322159.STER_0214 1.8e-276 958.0 Bacilli glnP ko:K02029,ko:K02030,ko:K10040,ko:K17073,ko:K17074 ko02010,map02010 M00228,M00236,M00589 ko00000,ko00001,ko00002,ko02000 3.A.1.3,3.A.1.3.20 Bacteria 1TPM3@1239,4HAS2@91061,COG0765@1,COG0765@2,COG0834@1,COG0834@2 NA|NA|NA P ABC transporter IIAPBPCI_00673 322159.STER_0215 9.1e-153 546.2 Bacilli uppP GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016021,GO:0016311,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0031224,GO:0031226,GO:0042221,GO:0044237,GO:0044425,GO:0044459,GO:0044464,GO:0046677,GO:0050380,GO:0050896,GO:0071944 3.6.1.27 ko:K06153 ko00550,map00550 R05627 RC00002 ko00000,ko00001,ko01000,ko01011 iYL1228.KPN_03461 Bacteria 1TPFA@1239,4HB0M@91061,COG1968@1,COG1968@2 NA|NA|NA V Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin IIAPBPCI_00674 322159.STER_0216 8.3e-134 483.0 Bacilli mecA GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 ko:K16511 ko00000 Bacteria 1UZ7D@1239,4HID6@91061,COG4862@1,COG4862@2 NA|NA|NA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis IIAPBPCI_00675 264199.stu0163 3e-183 647.9 Bacilli tagO GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0016043,GO:0016740,GO:0016772,GO:0016780,GO:0030145,GO:0034645,GO:0042546,GO:0043167,GO:0043169,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0044464,GO:0045229,GO:0046872,GO:0046914,GO:0070589,GO:0071554,GO:0071555,GO:0071704,GO:0071840,GO:0071944,GO:1901576 2.7.8.33,2.7.8.35 ko:K02851 R08856 RC00002 ko00000,ko01000,ko01003,ko01005 Bacteria 1TP9V@1239,4H9KT@91061,COG0472@1,COG0472@2 NA|NA|NA M transferase IIAPBPCI_00676 264199.stu0164 9.5e-144 516.2 Bacilli sufC GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006790,GO:0008150,GO:0008152,GO:0009314,GO:0009628,GO:0009987,GO:0016043,GO:0016226,GO:0022607,GO:0031163,GO:0044085,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051186,GO:0071840 ko:K09013 ko00000,ko02000 iECH74115_1262.ECH74115_2396,iECIAI1_1343.ECIAI1_1734,iECIAI39_1322.ECIAI39_1376,iECSP_1301.ECSP_2249,iECs_1301.ECs2389,iEcSMS35_1347.EcSMS35_1514,iG2583_1286.G2583_2077,iSFV_1184.SFV_1705,iSFxv_1172.SFxv_1919,iSSON_1240.SSON_1474,iS_1188.S1844,iZ_1308.Z2710 Bacteria 1TQ98@1239,4HAD9@91061,COG0396@1,COG0396@2 NA|NA|NA O ABC-type transport system involved in Fe-S cluster assembly, ATPase component IIAPBPCI_00677 322159.STER_0219 6.3e-235 819.7 Bacilli sufD ko:K07033,ko:K09015 ko00000 Bacteria 1TRT0@1239,4HB6W@91061,COG0719@1,COG0719@2 NA|NA|NA O assembly protein SufD IIAPBPCI_00678 264199.stu0166 2.3e-237 827.8 Bacilli sufS 2.8.1.7,4.4.1.16 ko:K04487,ko:K11717 ko00450,ko00730,ko01100,ko04122,map00450,map00730,map01100,map04122 R03599,R07460,R11528,R11529 RC00961,RC01789,RC02313 ko00000,ko00001,ko01000,ko02048,ko03016,ko03029 Bacteria 1TQ1W@1239,4HA6Z@91061,COG0520@1,COG0520@2 NA|NA|NA E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine IIAPBPCI_00679 264199.stu0167 2.1e-73 281.6 Bacilli nifU GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006807,GO:0006873,GO:0006875,GO:0006879,GO:0008150,GO:0008152,GO:0008198,GO:0009987,GO:0010467,GO:0016740,GO:0016782,GO:0019538,GO:0019725,GO:0030003,GO:0036455,GO:0042592,GO:0043167,GO:0043169,GO:0043170,GO:0044238,GO:0044424,GO:0044464,GO:0046872,GO:0046914,GO:0046916,GO:0048037,GO:0048878,GO:0050801,GO:0051536,GO:0051537,GO:0051539,GO:0051540,GO:0051604,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0065007,GO:0065008,GO:0071704,GO:0097428,GO:0098771,GO:1901564 ko:K04488 ko00000 Bacteria 1V3H9@1239,4HIJ0@91061,COG0822@1,COG0822@2 NA|NA|NA C SUF system FeS assembly protein, NifU family IIAPBPCI_00680 264199.stu0168 2.2e-273 947.6 Bacilli sufB GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016788,GO:0034641,GO:0040007,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:1901360 ko:K07033,ko:K09014 ko00000 Bacteria 1TQ21@1239,4HA1Z@91061,COG0719@1,COG0719@2 NA|NA|NA O assembly protein SufB IIAPBPCI_00681 435842.HMPREF0848_01501 9.7e-19 99.0 Bacilli oppA ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 M00439 ko00000,ko00001,ko00002,ko02000 3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25 Bacteria 1TNYQ@1239,4HAMK@91061,COG4166@1,COG4166@2 NA|NA|NA E ABC transporter substrate-binding protein IIAPBPCI_00682 264199.stu0170 1.1e-125 456.1 Bacilli oppA ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 M00439 ko00000,ko00001,ko00002,ko02000 3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25 Bacteria 1TNYQ@1239,4HAMK@91061,COG4166@1,COG4166@2 NA|NA|NA E ABC transporter substrate-binding protein IIAPBPCI_00683 1046629.Ssal_02003 8.5e-28 129.0 Bacilli oppB ko:K02033,ko:K15581 ko01501,ko02010,ko02024,map01501,map02010,map02024 M00239,M00439 ko00000,ko00001,ko00002,ko02000 3.A.1.5,3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25 Bacteria 1TP1S@1239,4HA2S@91061,COG0601@1,COG0601@2 NA|NA|NA P ABC-type dipeptide oligopeptide nickel transport systems, permease components IIAPBPCI_00685 1046629.Ssal_02002 2.5e-09 66.6 Bacilli oppC ko:K15582 ko01501,ko02010,ko02024,map01501,map02010,map02024 M00439 ko00000,ko00001,ko00002,ko02000 3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25 Bacteria 1TP4R@1239,4H9PZ@91061,COG1173@1,COG1173@2 NA|NA|NA EP ABC-type dipeptide oligopeptide nickel transport systems, permease components IIAPBPCI_00686 264199.stu0173 1.4e-38 165.2 Bacilli oppC ko:K15582 ko01501,ko02010,ko02024,map01501,map02010,map02024 M00439 ko00000,ko00001,ko00002,ko02000 3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25 Bacteria 1TP4R@1239,4H9PZ@91061,COG1173@1,COG1173@2 NA|NA|NA EP ABC-type dipeptide oligopeptide nickel transport systems, permease components IIAPBPCI_00687 264199.stu0174 3e-27 127.1 Bacteria oppD ko:K02031,ko:K02032,ko:K15583 ko01501,ko02010,ko02024,map01501,map02010,map02024 M00239,M00439 ko00000,ko00001,ko00002,ko02000 3.A.1.5,3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25 Bacteria COG0444@1,COG0444@2 NA|NA|NA P Belongs to the ABC transporter superfamily IIAPBPCI_00688 264199.stu0175 2.5e-32 144.1 Bacteria oppD ko:K02031,ko:K02032,ko:K15583 ko01501,ko02010,ko02024,map01501,map02010,map02024 M00239,M00439 ko00000,ko00001,ko00002,ko02000 3.A.1.5,3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25 Bacteria COG0444@1,COG0444@2 NA|NA|NA P Belongs to the ABC transporter superfamily IIAPBPCI_00689 264199.stu0176 1.1e-68 265.8 Bacilli oppD ko:K02031,ko:K02032,ko:K15583 ko01501,ko02010,ko02024,map01501,map02010,map02024 M00239,M00439 ko00000,ko00001,ko00002,ko02000 3.A.1.5,3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25 Bacteria 1TP6E@1239,4HA4E@91061,COG0444@1,COG0444@2 NA|NA|NA P Belongs to the ABC transporter superfamily IIAPBPCI_00690 264199.stu0177 1.1e-43 182.2 Bacilli oppD ko:K02031,ko:K02032,ko:K15583 ko01501,ko02010,ko02024,map01501,map02010,map02024 M00239,M00439 ko00000,ko00001,ko00002,ko02000 3.A.1.5,3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25 Bacteria 1TP6E@1239,4HA4E@91061,COG0444@1,COG0444@2 NA|NA|NA P Belongs to the ABC transporter superfamily IIAPBPCI_00691 264199.stu0178 2.2e-61 241.5 Bacilli oppF ko:K10823 ko01501,ko02010,ko02024,map01501,map02010,map02024 M00439 ko00000,ko00001,ko00002,ko02000 3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25 Bacteria 1V36J@1239,4H9YB@91061,COG4608@1,COG4608@2 NA|NA|NA P Belongs to the ABC transporter superfamily IIAPBPCI_00692 322159.STER_0227 1.4e-87 328.9 Bacilli oppF ko:K10823 ko01501,ko02010,ko02024,map01501,map02010,map02024 M00439 ko00000,ko00001,ko00002,ko02000 3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25 Bacteria 1V36J@1239,4H9YB@91061,COG4608@1,COG4608@2 NA|NA|NA P Belongs to the ABC transporter superfamily IIAPBPCI_00694 1123311.KB904471_gene1168 7.4e-10 69.7 Bacilli Bacteria 1W24H@1239,2DCPN@1,2ZEV1@2,4HZKX@91061 NA|NA|NA IIAPBPCI_00695 322159.STER_0230 1.9e-158 565.1 Bacilli hslO GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006950,GO:0006979,GO:0008150,GO:0008270,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0031647,GO:0036506,GO:0042026,GO:0042802,GO:0043167,GO:0043169,GO:0044183,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0050896,GO:0065007,GO:0065008 ko:K04083 ko00000,ko03110 Bacteria 1TRCH@1239,4HAFR@91061,COG1281@1,COG1281@2 NA|NA|NA O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress IIAPBPCI_00696 322159.STER_0231 7.4e-183 646.4 Bacilli dus ko:K05540 ko00000,ko01000,ko03016 Bacteria 1TQ2R@1239,4HA9K@91061,COG0042@1,COG0042@2 NA|NA|NA J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines IIAPBPCI_00697 264199.stu0182 3e-127 461.5 Bacteria ko:K20374,ko:K21405 ko02024,map02024 ko00000,ko00001,ko03000 Bacteria COG1396@1,COG1396@2 NA|NA|NA K sequence-specific DNA binding IIAPBPCI_00698 264199.stu0183 0.0 1566.6 Bacilli Bacteria 1V7E2@1239,4HJ1U@91061,COG0515@1,COG0515@2 NA|NA|NA KLT serine threonine protein kinase IIAPBPCI_00699 264199.stu0184 1.9e-223 781.6 Bacilli Bacteria 1UG5D@1239,2ZBIK@2,4H9W5@91061,COG0477@1 NA|NA|NA EGP Major facilitator Superfamily IIAPBPCI_00700 264199.stu0185 3.1e-72 277.7 Bacilli adcR Bacteria 1VXZT@1239,4HXMU@91061,COG1846@1,COG1846@2 NA|NA|NA K transcriptional IIAPBPCI_00701 264199.stu0186 2.2e-136 491.5 Bacilli adcC ko:K09817 ko02010,map02010 M00242 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.15.3,3.A.1.15.5 iHN637.CLJU_RS15665,iYO844.BSU02860 Bacteria 1TQ68@1239,4HAZI@91061,COG1121@1,COG1121@2 NA|NA|NA P ABC transporter, ATP-binding protein IIAPBPCI_00702 322159.STER_0235 1.9e-128 465.3 Bacilli adcB GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0010035,GO:0010038,GO:0010043,GO:0016020,GO:0042221,GO:0044464,GO:0050896,GO:0071944 ko:K09816 ko02010,map02010 M00242 ko00000,ko00001,ko00002,ko02000 3.A.1.15.3,3.A.1.15.5 Bacteria 1TR79@1239,4HC3C@91061,COG1108@1,COG1108@2 NA|NA|NA P ABC transporter (Permease IIAPBPCI_00703 264199.stu0188 2.1e-163 581.6 Bacilli mleP2 ko:K07088 ko00000 Bacteria 1UY4N@1239,4HB48@91061,COG0679@1,COG0679@2 NA|NA|NA S Transporter, auxin efflux carrier (AEC) family protein IIAPBPCI_00704 264199.stu0189 1.3e-64 252.3 Bacilli ptsG 2.7.1.199,2.7.1.208 ko:K02777,ko:K02778,ko:K02779,ko:K20107,ko:K20108 ko00010,ko00500,ko00520,ko02026,ko02060,ko05111,map00010,map00500,map00520,map02026,map02060,map05111 M00265,M00266,M00268,M00270,M00272,M00303,M00806 R02738,R02780,R04111,R04394,R05132,R08559 RC00017,RC03206 ko00000,ko00001,ko00002,ko01000,ko02000 4.A.1.1.1,4.A.1.1.11,4.A.1.1.12 Bacteria 1TPJ8@1239,4HA8X@91061,COG1263@1,COG1263@2 NA|NA|NA G pts system IIAPBPCI_00705 435842.HMPREF0848_01513 9.2e-25 119.0 Bacilli ptsG 2.7.1.199,2.7.1.208 ko:K02777,ko:K02778,ko:K02779,ko:K20107,ko:K20108 ko00010,ko00500,ko00520,ko02026,ko02060,ko05111,map00010,map00500,map00520,map02026,map02060,map05111 M00265,M00266,M00268,M00270,M00272,M00303,M00806 R02738,R02780,R04111,R04394,R05132,R08559 RC00017,RC03206 ko00000,ko00001,ko00002,ko01000,ko02000 4.A.1.1.1,4.A.1.1.11,4.A.1.1.12 Bacteria 1TPJ8@1239,4HA8X@91061,COG1263@1,COG1263@2,COG1264@1,COG1264@2,COG2190@1,COG2190@2 NA|NA|NA G pts system IIAPBPCI_00706 435842.HMPREF0848_01513 4.2e-257 893.6 Bacilli ptsG 2.7.1.199,2.7.1.208 ko:K02777,ko:K02778,ko:K02779,ko:K20107,ko:K20108 ko00010,ko00500,ko00520,ko02026,ko02060,ko05111,map00010,map00500,map00520,map02026,map02060,map05111 M00265,M00266,M00268,M00270,M00272,M00303,M00806 R02738,R02780,R04111,R04394,R05132,R08559 RC00017,RC03206 ko00000,ko00001,ko00002,ko01000,ko02000 4.A.1.1.1,4.A.1.1.11,4.A.1.1.12 Bacteria 1TPJ8@1239,4HA8X@91061,COG1263@1,COG1263@2,COG1264@1,COG1264@2,COG2190@1,COG2190@2 NA|NA|NA G pts system IIAPBPCI_00707 264199.stu0193 9.8e-157 559.3 Bacilli rgfB 3.1.3.90 ko:K06896 ko00500,map00500 R10486 RC00017 ko00000,ko00001,ko01000 Bacteria 1TQZG@1239,4HGS5@91061,COG3568@1,COG3568@2 NA|NA|NA L Endonuclease/Exonuclease/phosphatase family IIAPBPCI_00708 264199.stu0194 6.9e-256 889.4 Bacilli pgi GO:0003674,GO:0003824,GO:0004347,GO:0005975,GO:0005996,GO:0006006,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046031,GO:0046034,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576 5.3.1.9 ko:K01810 ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200 M00001,M00004,M00114 R02739,R02740,R03321 RC00376,RC00563 ko00000,ko00001,ko00002,ko01000,ko04147 iLJ478.TM1385 Bacteria 1TP29@1239,4H9VI@91061,COG0166@1,COG0166@2 NA|NA|NA G Belongs to the GPI family IIAPBPCI_00709 264199.stu0195 1.9e-127 461.8 Bacilli yeeN GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 Bacteria 1TPP5@1239,4H9WJ@91061,COG0217@1,COG0217@2 NA|NA|NA K transcriptional regulatory protein IIAPBPCI_00710 264199.stu0196 2.4e-48 198.0 Bacteria yajC GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0031522,GO:0032991,GO:0044425,GO:0044459,GO:0044464,GO:0071944 ko:K03210 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 ko00000,ko00001,ko00002,ko02044 3.A.5.1,3.A.5.2 Bacteria COG1862@1,COG1862@2 NA|NA|NA U protein transport IIAPBPCI_00711 264199.stu0197 5.3e-141 506.9 Bacilli uppS GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0071704,GO:1901576,GO:1901615,GO:1901617 2.5.1.31 ko:K00806 ko00900,ko01110,map00900,map01110 R06447 RC00279,RC02839 ko00000,ko00001,ko01000,ko01006 Bacteria 1TQTS@1239,4HA37@91061,COG0020@1,COG0020@2 NA|NA|NA H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids IIAPBPCI_00712 264199.stu0198 5e-145 520.4 Bacilli cdsA GO:0003674,GO:0003824,GO:0004605,GO:0005575,GO:0006139,GO:0006220,GO:0006221,GO:0006629,GO:0006644,GO:0006650,GO:0006655,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009117,GO:0009165,GO:0009987,GO:0016020,GO:0016024,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044271,GO:0044281,GO:0045017,GO:0046341,GO:0046471,GO:0046474,GO:0046483,GO:0046486,GO:0055086,GO:0070567,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.41 ko:K00981 ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070 M00093 R01799 RC00002 ko00000,ko00001,ko00002,ko01000 iSB619.SA_RS06255 Bacteria 1TT0Q@1239,4HAMN@91061,COG4589@1,COG4589@2 NA|NA|NA S Belongs to the CDS family IIAPBPCI_00713 322159.STER_0246 7.2e-231 806.2 Bacilli rseP GO:0000988,GO:0000989,GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006355,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016020,GO:0016021,GO:0016787,GO:0019219,GO:0019222,GO:0019538,GO:0031224,GO:0031226,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0040007,GO:0043170,GO:0043856,GO:0044238,GO:0044425,GO:0044459,GO:0044464,GO:0045152,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0070011,GO:0071704,GO:0071944,GO:0080090,GO:0140096,GO:0140110,GO:1901564,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141 3.4.21.107,3.4.21.116 ko:K04771,ko:K06399,ko:K11749,ko:K16922 ko01503,ko02020,ko02024,ko04112,map01503,map02020,map02024,map04112 M00728 ko00000,ko00001,ko00002,ko01000,ko01002,ko03110 Bacteria 1TPMC@1239,4HAQ5@91061,COG0750@1,COG0750@2 NA|NA|NA M zinc metalloprotease IIAPBPCI_00714 264199.stu0200 0.0 1207.6 Bacilli proS GO:0002161,GO:0003674,GO:0003824,GO:0004812,GO:0004827,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006433,GO:0006450,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0043906,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.15 ko:K01881 ko00970,map00970 M00359,M00360 R03661 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 iJN678.proS,iUTI89_1310.UTI89_C0210 Bacteria 1TRBV@1239,4H9NN@91061,COG0442@1,COG0442@2 NA|NA|NA J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS IIAPBPCI_00715 264199.stu0201 0.0 1137.9 Firmicutes WQ51_06230 ko:K01989,ko:K05832 M00247 ko00000,ko00002,ko02000 Bacteria 1TPB0@1239,COG2984@1,COG2984@2,COG4120@1,COG4120@2 NA|NA|NA S ABC transporter substrate binding protein IIAPBPCI_00716 264199.stu0202 7.5e-141 506.5 Bacilli cmpC ko:K05833 M00247 ko00000,ko00002,ko02000 Bacteria 1TPAN@1239,4HCHC@91061,COG1101@1,COG1101@2 NA|NA|NA S abc transporter atp-binding protein IIAPBPCI_00717 264199.stu0203 3.2e-41 174.1 Bacteria groS GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006355,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010033,GO:0010468,GO:0010556,GO:0016020,GO:0016032,GO:0016465,GO:0019058,GO:0019068,GO:0019219,GO:0019222,GO:0019899,GO:0030312,GO:0031323,GO:0031326,GO:0032991,GO:0033554,GO:0034605,GO:0035375,GO:0035966,GO:0040007,GO:0042221,GO:0042802,GO:0043167,GO:0043169,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046677,GO:0046872,GO:0050789,GO:0050794,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0051171,GO:0051252,GO:0051704,GO:0051716,GO:0060255,GO:0061077,GO:0065007,GO:0071944,GO:0080090,GO:0101031,GO:1903506,GO:1990220,GO:2000112,GO:2001141 ko:K04078 ko00000,ko03029,ko03110 Bacteria COG0234@1,COG0234@2 NA|NA|NA O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter IIAPBPCI_00718 264199.stu0204 1.1e-284 985.3 Bacilli groL GO:0001817,GO:0001819,GO:0001871,GO:0002791,GO:0002793,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009986,GO:0009987,GO:0016465,GO:0030246,GO:0030247,GO:0032677,GO:0032757,GO:0032879,GO:0032880,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0044764,GO:0046812,GO:0048518,GO:0048522,GO:0050707,GO:0050708,GO:0050714,GO:0050715,GO:0050789,GO:0050794,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051082,GO:0051222,GO:0051223,GO:0051239,GO:0051240,GO:0051704,GO:0061077,GO:0065007,GO:0070201,GO:0090087,GO:0098630,GO:0098743,GO:0101031,GO:1903530,GO:1903532,GO:1904951,GO:1990220,GO:2000482,GO:2000484,GO:2001065 ko:K04077 ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152 ko00000,ko00001,ko03019,ko03029,ko03110,ko04147 Bacteria 1TP1T@1239,4HA38@91061,COG0459@1,COG0459@2 NA|NA|NA O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions IIAPBPCI_00719 322159.STER_0016 1.2e-61 242.3 Firmicutes ko:K07483 ko00000 Bacteria 1W68S@1239,COG2963@1,COG2963@2 NA|NA|NA L Transposase IIAPBPCI_00720 1095738.HMPREF1047_1210 1e-16 92.0 Firmicutes ko:K07483 ko00000 Bacteria 1W68S@1239,COG2963@1,COG2963@2 NA|NA|NA L Transposase IIAPBPCI_00721 264199.stu0018 2.3e-48 198.4 Bacteria ko:K07497 ko00000 Bacteria COG2801@1,COG2801@2 NA|NA|NA L transposition IIAPBPCI_00722 264199.stu0207 1.3e-31 141.7 Firmicutes ko:K07497 ko00000 Bacteria 1TQQY@1239,COG2801@1,COG2801@2 NA|NA|NA L Integrase core domain protein IIAPBPCI_00725 435842.HMPREF0848_01529 5.3e-16 89.4 Bacteria Bacteria 2C0H5@1,2ZRTJ@2 NA|NA|NA IIAPBPCI_00726 322159.STER_0258 2.2e-54 218.0 Bacilli Bacteria 1VKEZ@1239,4HS74@91061,COG2314@1,COG2314@2 NA|NA|NA S TM2 domain IIAPBPCI_00727 264199.stu0211 3.1e-164 584.3 Bacilli rluA GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 5.4.99.23 ko:K06180 ko00000,ko01000,ko03009 Bacteria 1TSM6@1239,4HA7M@91061,COG0564@1,COG0564@2 NA|NA|NA J Responsible for synthesis of pseudouridine from uracil IIAPBPCI_00728 264199.stu0212 0.0 1503.4 Bacilli pbp2A 2.4.1.129,3.4.16.4 ko:K03693,ko:K05365,ko:K05366,ko:K12555,ko:K21464 ko00550,ko01100,ko01501,map00550,map01100,map01501 R04519 RC00005,RC00049 ko00000,ko00001,ko01000,ko01003,ko01011 GT51 Bacteria 1TPM5@1239,4H9SA@91061,COG0744@1,COG0744@2 NA|NA|NA M penicillin-binding protein IIAPBPCI_00729 264199.stu0213 3.3e-21 106.7 Bacteria rpmG ko:K02913 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria COG0267@1,COG0267@2 NA|NA|NA J Belongs to the bacterial ribosomal protein bL33 family IIAPBPCI_00730 904306.HMPREF9192_0204 2.2e-24 117.5 Firmicutes secE GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0008150,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0040007,GO:0044425,GO:0044459,GO:0044464,GO:0071944 ko:K03073 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 ko00000,ko00001,ko00002,ko02044 3.A.5.1,3.A.5.2 Bacteria 1W4QH@1239,COG0690@1,COG0690@2 NA|NA|NA U Belongs to the SecE SEC61-gamma family IIAPBPCI_00731 1046629.Ssal_01967 8.4e-96 356.3 Bacilli nusG GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:1903506,GO:2000112,GO:2001141 ko:K02601 ko00000,ko03009,ko03021 Bacteria 1TR3P@1239,4HAJA@91061,COG0250@1,COG0250@2 NA|NA|NA K Participates in transcription elongation, termination and antitermination IIAPBPCI_00732 264199.stu0216 4.6e-85 320.5 Bacteria 3.1.3.27,3.1.3.4,3.1.3.81,3.6.1.27 ko:K01096,ko:K19302 ko00550,ko00564,ko01100,map00550,map00564,map01100 R02029,R05627 RC00002,RC00017 ko00000,ko00001,ko01000,ko01011 Bacteria COG0671@1,COG0671@2 NA|NA|NA I phosphatidate phosphatase activity IIAPBPCI_00733 264199.stu0217 4e-47 193.7 Bacteria cof Bacteria COG0561@1,COG0561@2 NA|NA|NA Q phosphatase activity IIAPBPCI_00734 264199.stu0218 2.1e-35 154.5 Bacteria cof Bacteria COG0561@1,COG0561@2 NA|NA|NA Q phosphatase activity IIAPBPCI_00735 264199.stu0219 8.7e-99 366.3 Bacilli glcR ko:K02444,ko:K22103 ko00000,ko03000 Bacteria 1V6VV@1239,4HK1E@91061,COG1349@1,COG1349@2 NA|NA|NA K transcriptional regulator (DeoR family) IIAPBPCI_00736 264199.stu0220 0.0 1707.6 Bacilli leuS GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0030312,GO:0034641,GO:0034645,GO:0034660,GO:0040007,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 ko:K01869 ko00970,map00970 M00359,M00360 R03657 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Bacteria 1TP0Y@1239,4HAG1@91061,COG0495@1,COG0495@2 NA|NA|NA J Belongs to the class-I aminoacyl-tRNA synthetase family IIAPBPCI_00738 1046629.Ssal_01959 2e-24 117.9 Bacilli ko:K06889 ko00000 Bacteria 1V38K@1239,4HE7V@91061,COG1073@1,COG1073@2 NA|NA|NA S COG1073 Hydrolases of the alpha beta superfamily IIAPBPCI_00739 1095726.HMPREF1116_1200 8.3e-126 456.4 Bacilli ko:K06889 ko00000 Bacteria 1V38K@1239,4HE7V@91061,COG1073@1,COG1073@2 NA|NA|NA S COG1073 Hydrolases of the alpha beta superfamily IIAPBPCI_00740 264199.stu0226 3.2e-275 953.7 Bacilli pncB GO:0001666,GO:0003674,GO:0003824,GO:0004516,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009605,GO:0009607,GO:0009628,GO:0009987,GO:0016020,GO:0016740,GO:0016757,GO:0016763,GO:0016874,GO:0016879,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019365,GO:0019438,GO:0019637,GO:0019674,GO:0034355,GO:0034641,GO:0034654,GO:0036293,GO:0043094,GO:0043173,GO:0043207,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044403,GO:0044419,GO:0044464,GO:0046483,GO:0046496,GO:0047280,GO:0050896,GO:0051186,GO:0051188,GO:0051701,GO:0051704,GO:0051707,GO:0055086,GO:0070482,GO:0071704,GO:0071944,GO:0072524,GO:0072525,GO:0075136,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.21 ko:K00763 ko00760,ko01100,map00760,map01100 R01724 RC00033 ko00000,ko00001,ko01000 iYO844.BSU31750 Bacteria 1TPDW@1239,4HAI4@91061,COG1488@1,COG1488@2 NA|NA|NA H Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP IIAPBPCI_00741 264199.stu0227 2.1e-151 541.6 Bacilli nadE GO:0003674,GO:0003824,GO:0003952,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008795,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016874,GO:0016879,GO:0016880,GO:0016884,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019365,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0033554,GO:0034355,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043094,GO:0043173,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046496,GO:0050896,GO:0051186,GO:0051188,GO:0051716,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.1.5 ko:K01916 ko00760,ko01100,map00760,map01100 M00115 R00189 RC00100 ko00000,ko00001,ko00002,ko01000 iECSE_1348.ECSE_1910,iECW_1372.ECW_m1909,iEKO11_1354.EKO11_2035,iETEC_1333.ETEC_1772,iEcE24377_1341.EcE24377A_1961,iSFV_1184.SFV_1480,iSF_1195.SF1486,iSFxv_1172.SFxv_1676,iSSON_1240.SSON_1418,iS_1188.S1603,iWFL_1372.ECW_m1909 Bacteria 1TQ38@1239,4HA2R@91061,COG0171@1,COG0171@2 NA|NA|NA H Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source IIAPBPCI_00742 264199.stu0228 3.2e-77 294.3 Bacteria yhaI Bacteria COG3152@1,COG3152@2 NA|NA|NA L Membrane IIAPBPCI_00743 264199.stu0229 5.1e-259 899.8 Bacilli pepC GO:0000096,GO:0000098,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006508,GO:0006520,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008234,GO:0009056,GO:0009063,GO:0009636,GO:0009987,GO:0016054,GO:0016787,GO:0019538,GO:0019752,GO:0042221,GO:0043170,GO:0043418,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044273,GO:0044281,GO:0044282,GO:0044424,GO:0044464,GO:0046395,GO:0050667,GO:0050896,GO:0070011,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 3.4.22.40 ko:K01372 ko00000,ko01000,ko01002 Bacteria 1TRJN@1239,4HBZ9@91061,COG3579@1,COG3579@2 NA|NA|NA E aminopeptidase IIAPBPCI_00744 264199.stu0230 0.0 1389.0 Bacilli ponA GO:0005575,GO:0005576 2.4.1.129,3.4.16.4 ko:K03693,ko:K05365,ko:K05366,ko:K12555,ko:K21464 ko00550,ko01100,ko01501,map00550,map01100,map01501 R04519 RC00005,RC00049 ko00000,ko00001,ko01000,ko01003,ko01011 GT51 Bacteria 1TPM5@1239,4H9SA@91061,COG0744@1,COG0744@2 NA|NA|NA M penicillin-binding protein IIAPBPCI_00745 264199.stu0231 2.5e-109 401.4 Bacilli recU GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360 ko:K03700 ko00000,ko03400 Bacteria 1V3S4@1239,4HGZ7@91061,COG3331@1,COG3331@2 NA|NA|NA L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation IIAPBPCI_00746 322159.STER_0279 3.1e-95 354.4 Bacilli ypsA Bacteria 1V5Q7@1239,4HECZ@91061,COG4474@1,COG4474@2 NA|NA|NA S Belongs to the UPF0398 family IIAPBPCI_00747 264199.stu0233 7.3e-50 203.0 Bacilli gpsB ko:K04074 ko00000,ko03036 Bacteria 1VEQ4@1239,4HKUX@91061,COG3599@1,COG3599@2 NA|NA|NA D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation IIAPBPCI_00748 264199.stu0234 3.3e-222 777.3 Bacilli rlmL GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0008990,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016423,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.173,2.1.1.264 ko:K07444,ko:K12297 R07234 RC00003 ko00000,ko01000,ko03009 Bacteria 1TP0X@1239,4HBKY@91061,COG0116@1,COG0116@2 NA|NA|NA L Belongs to the methyltransferase superfamily IIAPBPCI_00749 322159.STER_0283 4.7e-303 1046.6 Bacilli mapZ ko:K20073 ko00000 Bacteria 1VDPS@1239,2DB6P@1,32TWV@2,4HK8Y@91061 NA|NA|NA D Early cell division protein that marks the future cell division site and supports proper FtsZ ring positioning IIAPBPCI_00750 322159.STER_0284 0.0 2030.4 Bacilli snf 2.7.11.1 ko:K08282 ko00000,ko01000 Bacteria 1TPFZ@1239,4HAIF@91061,COG0553@1,COG0553@2 NA|NA|NA L Superfamily II DNA RNA helicases, SNF2 family' IIAPBPCI_00751 40041.SZO_03140 2.5e-23 115.9 Streptococcus dysgalactiae group Bacteria 1M9KI@119603,1TXB8@1239,2DJ6Z@1,304WH@2,4I68V@91061 NA|NA|NA IIAPBPCI_00752 264199.stu0239 2.6e-255 887.5 Bacilli mpl GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0016874,GO:0016879,GO:0016881,GO:0042802,GO:0044424,GO:0044464 6.3.2.4,6.3.2.45,6.3.2.8 ko:K01921,ko:K01924,ko:K02558 ko00471,ko00473,ko00550,ko01100,ko01502,map00471,map00473,map00550,map01100,map01502 R01150,R03193 RC00064,RC00141 ko00000,ko00001,ko01000,ko01011 iSDY_1059.SDY_4251 Bacteria 1TQ5H@1239,4HAR4@91061,COG0773@1,COG0773@2 NA|NA|NA M Belongs to the MurCDEF family IIAPBPCI_00753 264199.stu0240 5.6e-52 209.9 Bacteria XK27_09675 ko:K07105 ko00000 Bacteria COG0454@1,COG0454@2 NA|NA|NA K -acetyltransferase IIAPBPCI_00754 322159.STER_0288 0.0 1187.2 Bacilli mltG ko:K07082 ko00000 Bacteria 1TS48@1239,4HAUV@91061,COG1559@1,COG1559@2 NA|NA|NA ADL Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation IIAPBPCI_00755 322159.STER_0289 4.6e-77 293.9 Bacilli greA GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0018130,GO:0019438,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:1901360,GO:1901362,GO:1901576 ko:K03624 ko00000,ko03021 Bacteria 1V44S@1239,4HGZU@91061,COG0782@1,COG0782@2 NA|NA|NA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides IIAPBPCI_00756 322159.STER_0291 2.6e-88 331.3 Firmicutes ko:K07497 ko00000 Bacteria 1TQQY@1239,COG2801@1,COG2801@2 NA|NA|NA L Integrase core domain protein IIAPBPCI_00757 264199.stu0245 2.9e-165 587.8 Bacilli yidC ko:K03217 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 ko00000,ko00001,ko00002,ko02044,ko03029 2.A.9 Bacteria 1TSDN@1239,4HCC8@91061,COG0706@1,COG0706@2 NA|NA|NA U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins IIAPBPCI_00758 264199.stu0246 6e-45 186.4 Bacteria acyP GO:0003674,GO:0003824,GO:0003998,GO:0006950,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0016787,GO:0016817,GO:0016818,GO:0050896 3.6.1.7 ko:K01512 ko00620,ko00627,ko01120,map00620,map00627,map01120 R00317,R01421,R01515 RC00043 ko00000,ko00001,ko01000 iSB619.SA_RS07020,iSBO_1134.SBO_2263,iSF_1195.SF0969,iSFxv_1172.SFxv_1053,iS_1188.S1036 Bacteria COG1254@1,COG1254@2 NA|NA|NA C Belongs to the acylphosphatase family IIAPBPCI_00759 264199.stu0247 1.9e-130 471.9 Bacilli spoU 2.1.1.185 ko:K03218,ko:K03437 ko00000,ko01000,ko03009,ko03016 Bacteria 1V3JP@1239,4HCF5@91061,COG0566@1,COG0566@2 NA|NA|NA J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family IIAPBPCI_00760 322159.STER_0295 6.1e-93 346.7 Bacilli XK27_09705 6.1.1.14 ko:K01879,ko:K06950 ko00970,map00970 M00360 R03654 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Bacteria 1V4QX@1239,4HHW0@91061,COG1418@1,COG1418@2 NA|NA|NA S HD superfamily hydrolase IIAPBPCI_00761 322159.STER_0296 1.5e-97 362.5 Bacilli ybhL GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K06890 ko00000 Bacteria 1V779@1239,4HIX1@91061,COG0670@1,COG0670@2 NA|NA|NA S Belongs to the BI1 family IIAPBPCI_00764 264199.stu0252 1.6e-243 848.2 Bacilli lysA 4.1.1.20 ko:K01586 ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230 M00016,M00525,M00526,M00527 R00451 RC00299 ko00000,ko00001,ko00002,ko01000 Bacteria 1TPE9@1239,4H9XW@91061,COG0019@1,COG0019@2 NA|NA|NA E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine IIAPBPCI_00765 322159.STER_0300 2.4e-90 338.2 Bacteria Bacteria COG1309@1,COG1309@2 NA|NA|NA K transcriptional regulator IIAPBPCI_00766 264199.stu0254 7.6e-36 156.0 Bacilli yneF ko:K09976 ko00000 Bacteria 1VDSU@1239,4HM8G@91061,COG3763@1,COG3763@2 NA|NA|NA S UPF0154 protein IIAPBPCI_00767 322159.STER_0302 4.2e-147 527.3 Bacilli murI GO:0000270,GO:0003674,GO:0003824,GO:0004857,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008657,GO:0008881,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0010911,GO:0016020,GO:0016853,GO:0016854,GO:0016855,GO:0030203,GO:0030234,GO:0032780,GO:0034645,GO:0036361,GO:0042030,GO:0042546,GO:0042802,GO:0043086,GO:0043170,GO:0043462,GO:0044036,GO:0044038,GO:0044085,GO:0044092,GO:0044237,GO:0044249,GO:0044260,GO:0044464,GO:0047661,GO:0050790,GO:0051336,GO:0051346,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0071944,GO:0072586,GO:0098772,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:2000371,GO:2000372 5.1.1.3 ko:K01776 ko00471,ko01100,map00471,map01100 R00260 RC00302 ko00000,ko00001,ko01000,ko01011 iYO844.BSU28390 Bacteria 1TPPR@1239,4HA46@91061,COG0796@1,COG0796@2 NA|NA|NA M Provides the (R)-glutamate required for cell wall biosynthesis IIAPBPCI_00768 264199.stu0256 7.1e-186 656.4 Bacilli rdgB GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 3.6.1.66,5.1.1.3 ko:K01776,ko:K02428 ko00230,ko00471,ko01100,map00230,map00471,map01100 R00260,R00426,R00720,R01855,R02100,R02720,R03531 RC00002,RC00302 ko00000,ko00001,ko01000,ko01011 Bacteria 1V6RN@1239,4HCP6@91061,COG0127@1,COG0127@2 NA|NA|NA F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions IIAPBPCI_00769 264199.stu0257 3.5e-99 367.5 Bacilli XK27_09740 ko:K07095 ko00000 Bacteria 1VA0U@1239,4HM24@91061,COG0622@1,COG0622@2 NA|NA|NA S Phosphoesterase IIAPBPCI_00770 322159.STER_0305 7.8e-85 319.7 Bacilli ykuL Bacteria 1VFAB@1239,4HRWJ@91061,COG0517@1,COG0517@2 NA|NA|NA S CBS domain IIAPBPCI_00771 264199.stu0259 2.8e-137 494.6 Bacilli xerD ko:K04763 ko00000,ko03036 Bacteria 1VY7C@1239,4IT0W@91061,COG4974@1,COG4974@2 NA|NA|NA L tyrosine recombinase. Not involved in the cutting and rejoining of the recombining DNA molecules on dif(SL) site IIAPBPCI_00772 264199.stu0260 1.5e-121 442.2 Bacilli scpA GO:0003674,GO:0005488,GO:0005515,GO:0042802 ko:K05896 ko00000,ko03036 Bacteria 1V8JV@1239,4IQZ5@91061,COG1354@1,COG1354@2 NA|NA|NA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves IIAPBPCI_00773 264199.stu0261 3e-99 367.9 Bacilli scpB GO:0003674,GO:0005488,GO:0005515,GO:0042802 ko:K06024 ko00000,ko03036 Bacteria 1V6HI@1239,4HIQ0@91061,COG1386@1,COG1386@2 NA|NA|NA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves IIAPBPCI_00774 264199.stu0262 1.6e-140 505.4 Bacilli rluB GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 5.4.99.19,5.4.99.21,5.4.99.22 ko:K06178,ko:K06182,ko:K06183 ko00000,ko01000,ko03009 Bacteria 1TP68@1239,4H9MU@91061,COG1187@1,COG1187@2 NA|NA|NA J Belongs to the pseudouridine synthase RsuA family IIAPBPCI_00775 264199.stu0263 4e-40 170.2 Bacilli yidD ko:K08998 ko00000 Bacteria 1VEIG@1239,4HPA3@91061,COG0759@1,COG0759@2 NA|NA|NA S Could be involved in insertion of integral membrane proteins into the membrane IIAPBPCI_00776 264199.stu0264 4.8e-255 886.7 Bacilli trkH GO:0003674,GO:0005215,GO:0005216,GO:0005261,GO:0005267,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015267,GO:0015318,GO:0015672,GO:0016020,GO:0016021,GO:0022803,GO:0022838,GO:0022857,GO:0022890,GO:0030001,GO:0030955,GO:0031224,GO:0031226,GO:0031420,GO:0034220,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0044425,GO:0044459,GO:0044464,GO:0046872,GO:0046873,GO:0046983,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0071944,GO:0098655,GO:0098660,GO:0098662 ko:K03498,ko:K03499 ko00000,ko02000 2.A.38.1,2.A.38.4 iECDH1ME8569_1439.ECDH1ME8569_1308,iPC815.YPO3762,iSFV_1184.SFV_3651 Bacteria 1TPAF@1239,4HCWN@91061,COG0168@1,COG0168@2 NA|NA|NA P Cation transport protein IIAPBPCI_00777 264199.stu0265 1.4e-245 855.1 Bacilli trkA ko:K03499 ko00000,ko02000 2.A.38.1,2.A.38.4 Bacteria 1TPNS@1239,4HCRM@91061,COG0569@1,COG0569@2 NA|NA|NA P Potassium transporter peripheral membrane component IIAPBPCI_00778 264199.stu0267 1.6e-96 358.6 Bacilli trmL GO:0001510,GO:0002128,GO:0002130,GO:0002131,GO:0002132,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016300,GO:0016427,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042802,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0052665,GO:0052666,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.207 ko:K03216 ko00000,ko01000,ko03016 Bacteria 1V3GW@1239,4HFNY@91061,COG0219@1,COG0219@2 NA|NA|NA J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily IIAPBPCI_00779 264199.stu0268 5.5e-90 337.0 Bacilli ribU GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006820,GO:0006855,GO:0008150,GO:0008509,GO:0008514,GO:0015075,GO:0015238,GO:0015711,GO:0015893,GO:0016020,GO:0022857,GO:0032217,GO:0032218,GO:0034220,GO:0035461,GO:0042221,GO:0042493,GO:0044464,GO:0050896,GO:0051179,GO:0051180,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0090482,GO:0098656 Bacteria 1V4BW@1239,4HHFT@91061,COG3601@1,COG3601@2 NA|NA|NA U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins IIAPBPCI_00780 264199.stu0269 1.1e-110 406.0 Bacilli bcrC 3.6.1.27 ko:K19302 ko00550,map00550 R05627 RC00002 ko00000,ko00001,ko01000,ko01011 Bacteria 1VF2U@1239,4HNXR@91061,COG0671@1,COG0671@2 NA|NA|NA I Membrane-associated phospholipid phosphatase IIAPBPCI_00781 264199.stu0270 1.2e-160 572.4 Bacteria ko:K20342,ko:K20480 ko02024,map02024 ko00000,ko00001,ko03000 Bacteria COG1396@1,COG1396@2 NA|NA|NA K sequence-specific DNA binding IIAPBPCI_00782 264199.stu0271 1.9e-33 147.9 Bacteria GO:0003674,GO:0003824,GO:0005215,GO:0005319,GO:0006810,GO:0006869,GO:0008150,GO:0010876,GO:0015399,GO:0015405,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0033036,GO:0034040,GO:0042623,GO:0042626,GO:0043492,GO:0051179,GO:0051234,GO:0055085,GO:0071702 ko:K06147,ko:K06148,ko:K20344 ko02010,ko02024,map02010,map02024 ko00000,ko00001,ko02000 3.A.1,3.A.1.106,3.A.1.109,3.A.1.112,3.A.1.21 Bacteria COG2274@1,COG2274@2 NA|NA|NA V protein secretion by the type I secretion system IIAPBPCI_00783 264199.stu0272 5.5e-105 387.1 Bacilli GO:0003674,GO:0003824,GO:0005215,GO:0005319,GO:0006810,GO:0006869,GO:0008150,GO:0010876,GO:0015399,GO:0015405,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0033036,GO:0034040,GO:0042623,GO:0042626,GO:0043492,GO:0051179,GO:0051234,GO:0055085,GO:0071702 ko:K06147,ko:K06148,ko:K20344 ko02010,ko02024,map02010,map02024 ko00000,ko00001,ko02000 3.A.1,3.A.1.106,3.A.1.109,3.A.1.112,3.A.1.21 Bacteria 1V77J@1239,4HAX2@91061,COG2274@1,COG2274@2 NA|NA|NA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain IIAPBPCI_00784 1046629.Ssal_01906 3.2e-75 287.7 Bacilli comA ko:K06147,ko:K06148,ko:K20344 ko02010,ko02024,map02010,map02024 ko00000,ko00001,ko02000 3.A.1,3.A.1.106,3.A.1.109,3.A.1.112,3.A.1.21 Bacteria 1V77J@1239,4HAX2@91061,COG2274@1,COG2274@2 NA|NA|NA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain IIAPBPCI_00785 904306.HMPREF9192_0124 2.4e-85 321.6 Bacilli comA ko:K06147,ko:K06148,ko:K20344 ko02010,ko02024,map02010,map02024 ko00000,ko00001,ko02000 3.A.1,3.A.1.106,3.A.1.109,3.A.1.112,3.A.1.21 Bacteria 1V77J@1239,4HAX2@91061,COG2274@1,COG2274@2 NA|NA|NA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain IIAPBPCI_00786 1046629.Ssal_01905 2.1e-30 138.3 Bacteria yhaI Bacteria COG3152@1,COG3152@2 NA|NA|NA L Membrane IIAPBPCI_00787 1046629.Ssal_01904 1.5e-56 225.3 Firmicutes Bacteria 1VCM1@1239,2E26M@1,32XD2@2 NA|NA|NA S Domain of unknown function (DUF4173) IIAPBPCI_00788 264199.stu0280 3.4e-94 350.9 Firmicutes ureI GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K03191,ko:K22112 ko05120,map05120 ko00000,ko00001,ko02000 1.A.29.1.1,1.A.29.1.2,1.A.29.1.3,1.A.29.1.4,1.A.29.1.5,1.A.29.1.6 Bacteria 1VAKB@1239,29DTM@1,300RH@2 NA|NA|NA S AmiS/UreI family transporter IIAPBPCI_00789 264199.stu0281 7.6e-46 189.5 Bacilli ureA GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0010035,GO:0010038,GO:0010039,GO:0019627,GO:0034641,GO:0042221,GO:0043419,GO:0043603,GO:0043605,GO:0044237,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0050896,GO:0051716,GO:0070887,GO:0071241,GO:0071248,GO:0071281,GO:0071704,GO:0071941,GO:1901564,GO:1901565,GO:1901575 3.5.1.5 ko:K01430,ko:K14048 ko00220,ko00230,ko00791,ko01100,ko01120,ko05120,map00220,map00230,map00791,map01100,map01120,map05120 R00131 RC02798,RC02806 ko00000,ko00001,ko01000 iYO844.BSU36660 Bacteria 1V7GU@1239,4HIJS@91061,COG0831@1,COG0831@2 NA|NA|NA E Belongs to the urease gamma subunit family IIAPBPCI_00790 1046629.Ssal_01901 1.7e-53 214.9 Bacilli ureB GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0010035,GO:0010038,GO:0010039,GO:0019627,GO:0034641,GO:0042221,GO:0043419,GO:0043603,GO:0043605,GO:0044237,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0050896,GO:0051716,GO:0070887,GO:0071241,GO:0071248,GO:0071281,GO:0071704,GO:0071941,GO:1901564,GO:1901565,GO:1901575 3.5.1.5 ko:K01429,ko:K14048 ko00220,ko00230,ko00791,ko01100,ko01120,ko05120,map00220,map00230,map00791,map01100,map01120,map05120 R00131 RC02798,RC02806 ko00000,ko00001,ko01000 Bacteria 1VAIA@1239,4HM0I@91061,COG0832@1,COG0832@2 NA|NA|NA E Belongs to the urease beta subunit family IIAPBPCI_00791 904306.HMPREF9192_0116 0.0 1154.4 Bacilli ureC 3.5.1.5 ko:K01428 ko00220,ko00230,ko00791,ko01100,ko01120,ko05120,map00220,map00230,map00791,map01100,map01120,map05120 R00131 RC02798,RC02806 ko00000,ko00001,ko01000 Bacteria 1TPQP@1239,4HBTS@91061,COG0804@1,COG0804@2 NA|NA|NA E Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family IIAPBPCI_00792 1046629.Ssal_01898 6.6e-78 296.6 Bacteria ureE GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 ko:K03187 ko00000 Bacteria COG2371@1,COG2371@2 NA|NA|NA O enzyme active site formation IIAPBPCI_00793 264199.stu0285 5.3e-130 470.3 Bacilli ureF ko:K03188 ko00000 Bacteria 1V2H0@1239,4HKQE@91061,COG0830@1,COG0830@2 NA|NA|NA O Required for maturation of urease via the functional incorporation of the urease nickel metallocenter IIAPBPCI_00794 1046629.Ssal_01896 9.5e-112 409.5 Bacilli ureG ko:K03189,ko:K04652 ko00000,ko03110 Bacteria 1TS00@1239,4HC5C@91061,COG0378@1,COG0378@2 NA|NA|NA KO Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG IIAPBPCI_00795 264199.stu0287 8.9e-161 572.8 Bacilli ureD ko:K03190 ko00000 Bacteria 1TVM2@1239,4HCED@91061,COG0829@1,COG0829@2 NA|NA|NA O Required for maturation of urease via the functional incorporation of the urease nickel metallocenter IIAPBPCI_00796 322159.STER_0330 3.9e-176 624.0 Bacilli cbiM GO:0000041,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0015675,GO:0016020,GO:0016021,GO:0030001,GO:0031224,GO:0032991,GO:0043190,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0071944,GO:0098533,GO:0098796,GO:0098797,GO:1902494,GO:1902495,GO:1904949,GO:1990351 ko:K02007 ko02010,map02010 M00245,M00246 ko00000,ko00001,ko00002,ko02000 3.A.1.18,3.A.1.22,3.A.1.23 Bacteria 1TPEN@1239,4HARY@91061,COG0310@1,COG0310@2 NA|NA|NA P PDGLE domain IIAPBPCI_00797 264199.stu0289 2.3e-134 485.0 Firmicutes ko:K02008 ko02010,map02010 M00245,M00246 ko00000,ko00001,ko00002,ko02000 3.A.1.18,3.A.1.22,3.A.1.23 Bacteria 1V7YC@1239,COG0619@1,COG0619@2 NA|NA|NA P cobalt transport protein IIAPBPCI_00798 264199.stu0290 3.1e-130 471.1 Bacilli cbiO GO:0000041,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0015675,GO:0016020,GO:0016021,GO:0030001,GO:0031224,GO:0032991,GO:0043190,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0071944,GO:0098533,GO:0098796,GO:0098797,GO:1902494,GO:1902495,GO:1904949,GO:1990351 ko:K02006 ko02010,map02010 M00245,M00246 ko00000,ko00001,ko00002,ko02000 3.A.1.18,3.A.1.22,3.A.1.23 Bacteria 1V16T@1239,4HI15@91061,COG1122@1,COG1122@2 NA|NA|NA P ABC transporter IIAPBPCI_00799 322159.STER_0333 4.5e-152 543.9 Bacteria ko:K02030 M00236 ko00000,ko00002,ko02000 3.A.1.3 Bacteria COG0834@1,COG0834@2 NA|NA|NA ET amino acid transport IIAPBPCI_00800 264199.stu0292 0.0 1872.4 Bacilli Bacteria 1TPTH@1239,4HAHU@91061,COG1020@1,COG1020@2 NA|NA|NA Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall IIAPBPCI_00801 264199.stu0293 0.0 1093.6 Bacilli 3.3.1.1,3.6.1.55,3.6.1.67 ko:K01251,ko:K03574,ko:K19965 ko00270,ko00790,ko01100,map00270,map00790,map01100 M00035,M00126 R00192,R04638,R04936 RC00002,RC00056,RC00069,RC01161,RC01243 ko00000,ko00001,ko00002,ko01000,ko01009,ko03400,ko04147 Bacteria 1V1P7@1239,4HFQH@91061,COG0499@1,COG0499@2,COG1051@1,COG1051@2 NA|NA|NA F NUDIX domain IIAPBPCI_00802 264199.stu0294 3.8e-205 720.7 Firmicutes Bacteria 1UHQE@1239,COG0477@1,COG0477@2 NA|NA|NA EGP Transmembrane secretion effector IIAPBPCI_00803 264199.stu0296 1.8e-153 548.5 Bacteria ko:K02030 M00236 ko00000,ko00002,ko02000 3.A.1.3 Bacteria COG0834@1,COG0834@2 NA|NA|NA ET amino acid transport IIAPBPCI_00804 322159.STER_0151 5.4e-161 573.5 Firmicutes ko:K07485 ko00000 Bacteria 1TQ93@1239,COG3464@1,COG3464@2 NA|NA|NA L Transposase IIAPBPCI_00805 1046629.Ssal_00039 1e-50 205.7 Firmicutes Bacteria 1TQ93@1239,COG3464@1,COG3464@2 NA|NA|NA L Transposase IIAPBPCI_00806 264199.stu0297 2.3e-162 578.2 Bacilli metQ ko:K02073 ko02010,map02010 M00238 ko00000,ko00001,ko00002,ko02000 3.A.1.24 Bacteria 1TQAS@1239,4HCTA@91061,COG1464@1,COG1464@2 NA|NA|NA M Belongs to the NlpA lipoprotein family IIAPBPCI_00807 264199.stu0298 2.5e-77 294.7 Bacilli dapE 3.5.1.18 ko:K01439 ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230 M00016 R02734 RC00064,RC00090 ko00000,ko00001,ko00002,ko01000 Bacteria 1TP2D@1239,4HB9G@91061,COG0624@1,COG0624@2 NA|NA|NA E COG0624, acetylornithine deacetylase succinyl-diaminopimelate desuccinylase and related deacylases IIAPBPCI_00808 904306.HMPREF9192_0106 4.8e-76 290.4 Bacilli dapE 3.5.1.18 ko:K01439 ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230 M00016 R02734 RC00064,RC00090 ko00000,ko00001,ko00002,ko01000 Bacteria 1TP2D@1239,4HB9G@91061,COG0624@1,COG0624@2 NA|NA|NA E COG0624, acetylornithine deacetylase succinyl-diaminopimelate desuccinylase and related deacylases IIAPBPCI_00809 264199.stu0300 2.1e-61 241.5 Bacteria dapE 3.5.1.18 ko:K01439 ko00300,ko01100,ko01120,ko01230,map00300,map01100,map01120,map01230 M00016 R02734 RC00064,RC00090 ko00000,ko00001,ko00002,ko01000 Bacteria COG0624@1,COG0624@2 NA|NA|NA E succinyl-diaminopimelate desuccinylase activity IIAPBPCI_00810 264199.stu0301 7.5e-189 666.4 Bacilli metN ko:K02071 ko02010,map02010 M00238 ko00000,ko00001,ko00002,ko02000 3.A.1.24 Bacteria 1TPPN@1239,4H9VX@91061,COG1135@1,COG1135@2 NA|NA|NA P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system IIAPBPCI_00811 264199.stu0302 8.8e-98 363.2 Bacilli metI ko:K02072 ko02010,map02010 M00238 ko00000,ko00001,ko00002,ko02000 3.A.1.24 Bacteria 1V0GE@1239,4HFMB@91061,COG2011@1,COG2011@2 NA|NA|NA P ABC transporter (Permease IIAPBPCI_00812 264199.stu0303 6.1e-211 740.0 Bacilli sstT GO:0003333,GO:0003674,GO:0005215,GO:0005283,GO:0005295,GO:0005310,GO:0005342,GO:0005343,GO:0005416,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006814,GO:0006820,GO:0006835,GO:0006865,GO:0008150,GO:0008324,GO:0008509,GO:0008514,GO:0015075,GO:0015077,GO:0015081,GO:0015171,GO:0015175,GO:0015291,GO:0015293,GO:0015294,GO:0015318,GO:0015370,GO:0015672,GO:0015711,GO:0015804,GO:0015849,GO:0016020,GO:0016021,GO:0017153,GO:0022804,GO:0022857,GO:0022890,GO:0030001,GO:0031224,GO:0032329,GO:0034220,GO:0035725,GO:0044425,GO:0044464,GO:0046873,GO:0046942,GO:0046943,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098655,GO:0098656,GO:0098660,GO:0098662,GO:1903825,GO:1905039 ko:K07862 ko00000,ko02000 2.A.23.4 iAF1260.b3089,iBWG_1329.BWG_2799,iECDH10B_1368.ECDH10B_3265,iECDH1ME8569_1439.ECDH1ME8569_2984,iECH74115_1262.ECH74115_4404,iECIAI1_1343.ECIAI1_3235,iECO103_1326.ECO103_3834,iECO111_1330.ECO111_3911,iECO26_1355.ECO26_4192,iECP_1309.ECP_3180,iECSE_1348.ECSE_3370,iECSP_1301.ECSP_4063,iECUMN_1333.ECUMN_3573,iECW_1372.ECW_m3356,iECs_1301.ECs3971,iEKO11_1354.EKO11_0630,iETEC_1333.ETEC_3359,iEcDH1_1363.EcDH1_0612,iEcE24377_1341.EcE24377A_3557,iG2583_1286.G2583_3813,iJO1366.b3089,iJR904.b3089,iSFV_1184.SFV_3130,iSSON_1240.SSON_3242,iUMNK88_1353.UMNK88_3845,iWFL_1372.ECW_m3356,iY75_1357.Y75_RS16050,iYL1228.KPN_03517,iZ_1308.Z4442 Bacteria 1TPD2@1239,4HBEC@91061,COG3633@1,COG3633@2 NA|NA|NA E Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system) IIAPBPCI_00813 322159.STER_0345 4.9e-159 567.0 Bacilli salL GO:0003674,GO:0003824,GO:0016740,GO:0016765 2.5.1.63,2.5.1.94 ko:K09134,ko:K21153,ko:K22205 ko00000,ko01000 Bacteria 1TSR3@1239,4HAW6@91061,COG1912@1,COG1912@2 NA|NA|NA S S-adenosyl-l-methionine hydroxide adenosyltransferase IIAPBPCI_00814 322159.STER_0346 8e-94 349.7 Bacilli ko:K16924,ko:K16927 M00582 ko00000,ko00002,ko02000 3.A.1.29,3.A.1.32 Bacteria 1V1GT@1239,4HGAE@91061,COG4720@1,COG4720@2 NA|NA|NA S UPF0397 protein IIAPBPCI_00815 322159.STER_0347 0.0 1087.8 Bacilli ykoD GO:0003674,GO:0003824,GO:0005215,GO:0006810,GO:0008150,GO:0015399,GO:0015405,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0042623,GO:0042626,GO:0043492,GO:0051179,GO:0051234,GO:0055085 ko:K02006,ko:K16786,ko:K16787 ko02010,map02010 M00245,M00246,M00582 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.18,3.A.1.22,3.A.1.23,3.A.1.25,3.A.1.28,3.A.1.29,3.A.1.30,3.A.1.31,3.A.1.32,3.A.1.33,3.A.1.35 Bacteria 1TPH8@1239,4HAJM@91061,COG1122@1,COG1122@2 NA|NA|NA P abc transporter atp-binding protein IIAPBPCI_00816 322159.STER_0348 1.2e-149 535.8 Bacilli cbiQ ko:K16785,ko:K16786,ko:K16787 ko02010,map02010 M00582 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.25,3.A.1.28,3.A.1.29,3.A.1.30,3.A.1.31,3.A.1.32,3.A.1.33,3.A.1.35 iSB619.SA_RS14165 Bacteria 1TPMV@1239,4HBTW@91061,COG0619@1,COG0619@2 NA|NA|NA P cobalt transport IIAPBPCI_00817 264199.stu0312 0.0 1310.4 Bacilli tkt 2.2.1.1 ko:K00615 ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230 M00004,M00007,M00165,M00167 R01067,R01641,R01830,R06590 RC00032,RC00226,RC00571,RC01560 ko00000,ko00001,ko00002,ko01000 Bacteria 1TPIB@1239,4HADA@91061,COG0021@1,COG0021@2 NA|NA|NA G Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate IIAPBPCI_00818 1123298.KB904063_gene687 1.4e-11 75.5 Bacilli ulaG GO:0003674,GO:0003824,GO:0005488,GO:0005975,GO:0005996,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0008150,GO:0008152,GO:0009056,GO:0009109,GO:0009111,GO:0009987,GO:0016052,GO:0016054,GO:0016787,GO:0016788,GO:0019752,GO:0019852,GO:0019854,GO:0030145,GO:0035460,GO:0042365,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0046365,GO:0046395,GO:0046872,GO:0046914,GO:0051186,GO:0051187,GO:0052689,GO:0071704,GO:1901575 ko:K03476 ko00053,ko01100,ko01120,map00053,map01100,map01120 M00550 R07677 RC02793 ko00000,ko00001,ko00002,ko01000 iAF1260.b4192,iAPECO1_1312.APECO1_2200,iBWG_1329.BWG_3904,iEC55989_1330.EC55989_4749,iECDH10B_1368.ECDH10B_4387,iECH74115_1262.ECH74115_5708,iECIAI1_1343.ECIAI1_4425,iECIAI39_1322.ECIAI39_4657,iECO111_1330.ECO111_5022,iECO26_1355.ECO26_5358,iECSE_1348.ECSE_4490,iECSP_1301.ECSP_5292,iECUMN_1333.ECUMN_4725,iECW_1372.ECW_m4554,iEKO11_1354.EKO11_4120,iEcE24377_1341.EcE24377A_4752,iEcHS_1320.EcHS_A4436,iEcolC_1368.EcolC_3821,iJO1366.b4192,iUTI89_1310.UTI89_C4792,iWFL_1372.ECW_m4554,iY75_1357.Y75_RS21830,iYL1228.KPN_04585,ic_1306.c5280 Bacteria 1TSFV@1239,4HBNW@91061,COG2220@1,COG2220@2 NA|NA|NA S L-ascorbate 6-phosphate lactonase IIAPBPCI_00819 264199.stu0313 1.9e-121 441.8 Bacilli ktrA ko:K03499 ko00000,ko02000 2.A.38.1,2.A.38.4 Bacteria 1TQ9H@1239,4HBPH@91061,COG0569@1,COG0569@2 NA|NA|NA P COG0569 K transport systems, NAD-binding component IIAPBPCI_00820 322159.STER_0351 2.2e-241 841.3 Bacilli ko:K03498 ko00000,ko02000 2.A.38.1,2.A.38.4 Bacteria 1TQ4S@1239,4H9ME@91061,COG0168@1,COG0168@2 NA|NA|NA P COG0168 Trk-type K transport systems, membrane components IIAPBPCI_00821 264199.stu0315 3.1e-130 471.1 Bacilli rsmG GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.170 ko:K03501 ko00000,ko01000,ko03009,ko03036 Bacteria 1TPBT@1239,4HAAZ@91061,COG0357@1,COG0357@2 NA|NA|NA J Ribosomal RNA small subunit methyltransferase G IIAPBPCI_00822 322159.STER_0353 2.4e-90 338.2 Bacilli yceD GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0040007,GO:0044424,GO:0044444,GO:0044464 ko:K07040 ko00000 Bacteria 1VB08@1239,4HME9@91061,COG1399@1,COG1399@2 NA|NA|NA K metal-binding, possibly nucleic acid-binding protein IIAPBPCI_00823 264199.stu0317 3.9e-122 444.1 Bacilli Bacteria 1TS81@1239,4H9NE@91061,COG0745@1,COG0745@2 NA|NA|NA T Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain IIAPBPCI_00824 264199.stu0318 1.2e-275 955.3 Bacilli Bacteria 1UHQC@1239,4HWKS@91061,COG0642@1,COG2205@2 NA|NA|NA T PhoQ Sensor IIAPBPCI_00825 264199.stu0319 2.8e-82 311.2 Bacilli nrdR GO:0000166,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008144,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0017076,GO:0019219,GO:0019222,GO:0030554,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 ko:K07738 ko00000,ko03000 Bacteria 1V3JA@1239,4HGXA@91061,COG1327@1,COG1327@2 NA|NA|NA K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes IIAPBPCI_00826 264199.stu0320 2.7e-216 757.7 Bacteria dnaB ko:K03346 ko00000,ko03032 Bacteria COG3611@1,COG3611@2 NA|NA|NA L Replication initiation and membrane attachment IIAPBPCI_00827 264199.stu0321 8.9e-167 592.8 Bacilli dnaI GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0034641,GO:0034645,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576,GO:1990837 ko:K11144 ko00000,ko03032 Bacteria 1TPZX@1239,4HABS@91061,COG1484@1,COG1484@2 NA|NA|NA L Primosomal protein DnaI IIAPBPCI_00828 322159.STER_0359 1.1e-245 855.5 Bacilli der GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0030312,GO:0040007,GO:0044464,GO:0071944 1.1.1.399,1.1.1.95 ko:K00058,ko:K03977 ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230 M00020 R01513 RC00031 ko00000,ko00001,ko00002,ko01000,ko03009,ko04147 Bacteria 1TPNM@1239,4HAJ6@91061,COG1160@1,COG1160@2 NA|NA|NA S GTPase that plays an essential role in the late steps of ribosome biogenesis IIAPBPCI_00829 904306.HMPREF9192_0086 8.3e-89 333.2 Bacilli yrdC 3.5.1.19 ko:K08281 ko00760,ko01100,map00760,map01100 R01268 RC00100 ko00000,ko00001,ko01000 Bacteria 1V70H@1239,4HJXC@91061,COG1335@1,COG1335@2 NA|NA|NA Q isochorismatase IIAPBPCI_00830 1116231.SMA_0321 1.6e-105 388.7 Bacilli Bacteria 1TP4C@1239,4HAXJ@91061,COG3328@1,COG3328@2 NA|NA|NA L Transposase IIAPBPCI_00831 1123299.AUKZ01000014_gene1677 3.9e-17 94.7 Bacilli Bacteria 1TQN4@1239,4HN8F@91061,COG0358@1,COG0358@2,COG4227@1,COG4227@2 NA|NA|NA L Psort location Cytoplasmic, score IIAPBPCI_00834 264199.stu0329 8.6e-232 809.3 Bacilli serS GO:0000287,GO:0003674,GO:0003824,GO:0004812,GO:0004828,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006434,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009059,GO:0009069,GO:0009070,GO:0009987,GO:0010467,GO:0016053,GO:0016070,GO:0016259,GO:0016260,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0042802,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046872,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.1.1.11 ko:K01875 ko00970,map00970 M00359,M00360 R03662,R08218 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 iAF987.Gmet_3528,iSDY_1059.SDY_2368 Bacteria 1TP4W@1239,4H9Y4@91061,COG0172@1,COG0172@2 NA|NA|NA J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) IIAPBPCI_00835 322159.STER_0369 4.2e-62 243.8 Bacilli manO Bacteria 1VF36@1239,4HPYI@91061,COG4687@1,COG4687@2 NA|NA|NA S protein conserved in bacteria IIAPBPCI_00836 264199.stu0331 6.2e-168 596.7 Bacilli manN ko:K02796 ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060 M00276 R02630 RC00017,RC03206 ko00000,ko00001,ko00002,ko02000 4.A.6.1 Bacteria 1TQA3@1239,4HA3K@91061,COG3716@1,COG3716@2 NA|NA|NA G PTS system mannose fructose sorbose family IID component IIAPBPCI_00837 322159.STER_0371 3.9e-116 424.5 Bacilli manM ko:K02795,ko:K02796 ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060 M00276 R02630 RC00017,RC03206 ko00000,ko00001,ko00002,ko02000 4.A.6.1 Bacteria 1TPKK@1239,4H9QI@91061,COG3715@1,COG3715@2 NA|NA|NA G pts system IIAPBPCI_00838 322159.STER_0372 2.4e-173 614.8 Bacilli manL 2.7.1.191 ko:K02793,ko:K02794 ko00051,ko00520,ko01100,ko02060,map00051,map00520,map01100,map02060 M00276 R02630 RC00017,RC03206 ko00000,ko00001,ko00002,ko01000,ko02000 4.A.6.1 Bacteria 1TQJ4@1239,4H9Z8@91061,COG2893@1,COG2893@2,COG3444@1,COG3444@2 NA|NA|NA G pts system IIAPBPCI_00839 264199.stu0334 4.9e-139 500.4 Bacilli XK27_00940 1.2.1.70,3.5.1.9 ko:K02492,ko:K07130 ko00380,ko00630,ko00860,ko01100,ko01110,ko01120,map00380,map00630,map00860,map01100,map01110,map01120 M00038,M00121 R00988,R01959,R04109,R04911 RC00055,RC00149,RC00263,RC00323 ko00000,ko00001,ko00002,ko01000 Bacteria 1TRBQ@1239,4HCAB@91061,COG1878@1,COG1878@2 NA|NA|NA S Metal-dependent hydrolase IIAPBPCI_00840 322159.STER_0374 5.6e-152 543.5 Bacilli yitU 3.1.3.104 ko:K21064 ko00740,ko01100,ko01110,map00740,map01100,map01110 M00125 R07280 RC00017 ko00000,ko00001,ko00002,ko01000 Bacteria 1TREF@1239,4H9Y9@91061,COG0561@1,COG0561@2 NA|NA|NA S hydrolases of the HAD superfamily IIAPBPCI_00841 904306.HMPREF9192_0073 3e-241 840.9 Bacilli pbuO ko:K06901 ko00000,ko02000 2.A.1.40 Bacteria 1TQC6@1239,4HANG@91061,COG2252@1,COG2252@2 NA|NA|NA S permease IIAPBPCI_00842 264199.stu0337 1.4e-77 295.4 Bacilli ydiB GO:0002949,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0034470,GO:0034641,GO:0034660,GO:0040007,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360 2.7.1.221,5.1.1.1 ko:K01775,ko:K06925,ko:K07102 ko00473,ko00520,ko01100,ko01502,map00473,map00520,map01100,map01502 R00401,R08968,R11024 RC00002,RC00078,RC00285 ko00000,ko00001,ko01000,ko01011,ko03016 Bacteria 1V6CV@1239,4HIIF@91061,COG0802@1,COG0802@2 NA|NA|NA M ATPase or kinase IIAPBPCI_00843 264199.stu0338 3.2e-92 344.4 Firmicutes XK27_05885 2.3.1.82 ko:K18816 br01600,ko00000,ko01000,ko01504 Bacteria 1VA2F@1239,COG1247@1,COG1247@2 NA|NA|NA M Acetyltransferase GNAT Family IIAPBPCI_00844 264199.stu0339 1.5e-217 761.9 Bacilli brpA Bacteria 1TR1B@1239,4HA09@91061,COG1316@1,COG1316@2 NA|NA|NA K Transcriptional IIAPBPCI_00845 264199.stu0340 3.9e-81 307.4 Bacilli rimP GO:0000028,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:1901564,GO:1901566,GO:1901576 ko:K09748 ko00000,ko03009 Bacteria 1V6KT@1239,4HH88@91061,COG0779@1,COG0779@2 NA|NA|NA S Required for maturation of 30S ribosomal subunits IIAPBPCI_00846 322159.STER_0380 3.1e-212 744.2 Bacilli nusA GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0031554,GO:0031564,GO:0043244,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:1903506,GO:2000112,GO:2001141 ko:K02600,ko:K02945 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03009,ko03011,ko03021 Bacteria 1TPB3@1239,4HA7F@91061,COG0195@1,COG0195@2 NA|NA|NA K Participates in both transcription termination and antitermination IIAPBPCI_00847 264199.stu0342 3e-47 194.1 Bacilli ylxR ko:K02600,ko:K07742 ko00000,ko03009,ko03021 Bacteria 1VEJS@1239,4HKBY@91061,COG2740@1,COG2740@2 NA|NA|NA K Nucleic-acid-binding protein implicated in transcription termination IIAPBPCI_00848 264199.stu0343 1.4e-41 175.3 Bacilli ylxQ ko:K07590,ko:K07742 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1VEYG@1239,4HNY7@91061,COG1358@1,COG1358@2 NA|NA|NA J ribosomal protein IIAPBPCI_00849 264199.stu0344 0.0 1174.5 Bacilli infB GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 ko:K02519 ko00000,ko03012,ko03029 Bacteria 1TPAI@1239,4HA8S@91061,COG0532@1,COG0532@2 NA|NA|NA J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex IIAPBPCI_00850 264199.stu0345 1.7e-57 228.4 Bacilli rbfA GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009266,GO:0009409,GO:0009628,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0030490,GO:0033554,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0042274,GO:0043021,GO:0043024,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071840,GO:0090304,GO:1901360 ko:K02834 ko00000,ko03009 Bacteria 1VA0P@1239,4HII1@91061,COG0858@1,COG0858@2 NA|NA|NA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA IIAPBPCI_00851 904306.HMPREF9192_0063 1.8e-45 188.7 Bacilli yvdD 3.2.2.10 ko:K06966 ko00230,ko00240,map00230,map00240 R00182,R00510 RC00063,RC00318 ko00000,ko00001,ko01000 Bacteria 1UKED@1239,4HGSU@91061,COG1611@1,COG1611@2 NA|NA|NA S Belongs to the LOG family IIAPBPCI_00852 264199.stu0348 3.6e-219 767.3 Bacilli femA 2.3.2.10,2.3.2.16,2.3.2.17,2.3.2.18 ko:K05363,ko:K11693,ko:K11694,ko:K11695,ko:K12554 ko00550,ko01100,map00550,map01100 R08776,R08777,R08778,R08779,R08780 RC00055,RC00064,RC00096 ko00000,ko00001,ko01000,ko01011 Bacteria 1UZIJ@1239,4HAQ3@91061,COG2348@1,COG2348@2 NA|NA|NA V protein involved in methicillin resistance IIAPBPCI_00853 264199.stu0349 7.9e-274 949.1 Bacilli murE 6.3.2.13,6.3.2.7 ko:K01928,ko:K05362 ko00300,ko00550,ko01100,map00300,map00550,map01100 R02786,R02788 RC00064,RC00090 ko00000,ko00001,ko01000,ko01011 Bacteria 1TPQE@1239,4H9T1@91061,COG0769@1,COG0769@2 NA|NA|NA M to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan IIAPBPCI_00854 264199.stu0350 1e-282 978.8 Bacilli ytgP GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K03328,ko:K06409 ko00000,ko02000 2.A.66.2,2.A.66.2.14 Bacteria 1TNYX@1239,4H9RY@91061,COG2244@1,COG2244@2 NA|NA|NA S Membrane protein involved in the export of O-antigen and teichoic acid IIAPBPCI_00855 1282665.H353_06423 2.3e-91 341.7 Bacilli pacL 3.6.3.8,3.6.3.9 ko:K01537,ko:K01539 ko04022,ko04024,ko04260,ko04261,ko04911,ko04918,ko04919,ko04925,ko04960,ko04961,ko04964,ko04970,ko04971,ko04972,ko04973,ko04974,ko04976,ko04978,map04022,map04024,map04260,map04261,map04911,map04918,map04919,map04925,map04960,map04961,map04964,map04970,map04971,map04972,map04973,map04974,map04976,map04978 ko00000,ko00001,ko01000,ko04147 3.A.3.1,3.A.3.2 Bacteria 1TPF5@1239,4HTQ4@91061,COG0474@1,COG0474@2 NA|NA|NA P cation transport ATPase IIAPBPCI_00856 264199.stu0352 1.1e-200 705.7 Bacilli metB GO:0003674,GO:0003824,GO:0003962,GO:0004123,GO:0016740,GO:0016765,GO:0016829,GO:0016846 2.5.1.48,4.4.1.8 ko:K01739,ko:K01760 ko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00270,map00450,map00920,map01100,map01110,map01130,map01230 M00017 R00782,R00999,R01286,R01288,R02408,R02508,R03217,R03260,R04941,R04944,R04945,R04946 RC00020,RC00056,RC00069,RC00382,RC00420,RC00488,RC00710,RC01245,RC02303,RC02848,RC02866 ko00000,ko00001,ko00002,ko01000 Bacteria 1TPC7@1239,4HAFQ@91061,COG0626@1,COG0626@2 NA|NA|NA E cystathionine IIAPBPCI_00857 264199.stu0353 2.8e-221 774.2 Bacilli malY 4.4.1.8 ko:K14155 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 R00782,R01286,R02408,R04941 RC00056,RC00069,RC00382,RC00488,RC00710,RC01245,RC02303 ko00000,ko00001,ko01000,ko01007 Bacteria 1TP5G@1239,4H9PE@91061,COG1168@1,COG1168@2 NA|NA|NA E COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities IIAPBPCI_00858 1046629.Ssal_01837 8e-10 69.7 Bacilli sacB GO:0005575,GO:0005576 2.4.1.10,2.4.1.9,3.2.1.26 ko:K00692,ko:K01193,ko:K20811 ko00052,ko00500,ko01100,ko02020,map00052,map00500,map01100,map02020 R00801,R00802,R02410,R03635,R03921,R04194,R05140,R06088 RC00028,RC00077,RC00247 ko00000,ko00001,ko01000,ko01003 GH32,GH68 Bacteria 1TR8C@1239,4HBYU@91061,COG1621@1,COG1621@2 NA|NA|NA G Belongs to the glycosyl hydrolase 68 family IIAPBPCI_00859 264199.stu0355 4.4e-112 410.6 Bacilli upp GO:0003674,GO:0003824,GO:0004849,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006213,GO:0006220,GO:0006221,GO:0006222,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008655,GO:0009058,GO:0009112,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009173,GO:0009174,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0018130,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0043094,GO:0043097,GO:0043174,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046049,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.2.9 ko:K00761 ko00240,ko01100,map00240,map01100 R00966 RC00063 ko00000,ko00001,ko01000 iSB619.SA_RS11010 Bacteria 1TPMT@1239,4H9Y0@91061,COG0035@1,COG0035@2 NA|NA|NA F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate IIAPBPCI_00860 264199.stu0356 8.3e-105 386.3 Bacilli clpP GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005515,GO:0006355,GO:0006508,GO:0006515,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019219,GO:0019222,GO:0019538,GO:0030163,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0042623,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051603,GO:0060255,GO:0065007,GO:0070011,GO:0071704,GO:0080090,GO:0140096,GO:1901564,GO:1901565,GO:1901575,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 3.4.21.92 ko:K01358 ko04112,ko04212,map04112,map04212 ko00000,ko00001,ko01000,ko01002 Bacteria 1TQ91@1239,4HA8J@91061,COG0740@1,COG0740@2 NA|NA|NA OU Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins IIAPBPCI_00861 264199.stu0357 1.3e-73 282.3 Bacilli ylbF Bacteria 1V3R6@1239,4HGYS@91061,COG3679@1,COG3679@2 NA|NA|NA S Belongs to the UPF0342 family IIAPBPCI_00862 264199.stu0358 7.1e-46 189.5 Bacilli ylbG Bacteria 1VF52@1239,4HNTH@91061,COG4471@1,COG4471@2 NA|NA|NA S UPF0298 protein IIAPBPCI_00863 264199.stu0359 9.1e-212 742.7 Bacilli livJ ko:K01999 ko02010,ko02024,map02010,map02024 M00237 ko00000,ko00001,ko00002,ko02000 3.A.1.4 Bacteria 1TPQ2@1239,4H9PI@91061,COG0683@1,COG0683@2 NA|NA|NA E COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component IIAPBPCI_00864 264199.stu0360 1.9e-145 521.9 Bacilli livH ko:K01997 ko02010,ko02024,map02010,map02024 M00237 ko00000,ko00001,ko00002,ko02000 3.A.1.4 Bacteria 1TR24@1239,4HBFZ@91061,COG0559@1,COG0559@2 NA|NA|NA E Belongs to the binding-protein-dependent transport system permease family IIAPBPCI_00865 264199.stu0361 1.4e-138 499.2 Bacilli livM ko:K01995,ko:K01998 ko02010,ko02024,map02010,map02024 M00237 ko00000,ko00001,ko00002,ko02000 3.A.1.4 Bacteria 1TPMZ@1239,4HDIU@91061,COG4177@1,COG4177@2 NA|NA|NA E Belongs to the binding-protein-dependent transport system permease family IIAPBPCI_00866 322159.STER_0401 6.2e-137 493.4 Bacilli livG ko:K01995,ko:K01998 ko02010,ko02024,map02010,map02024 M00237 ko00000,ko00001,ko00002,ko02000 3.A.1.4 Bacteria 1TR0P@1239,4HASG@91061,COG0411@1,COG0411@2 NA|NA|NA E COG0411 ABC-type branched-chain amino acid transport systems, ATPase component IIAPBPCI_00867 1046629.Ssal_01828 4.8e-123 447.2 Bacilli livF ko:K01996 ko02010,ko02024,map02010,map02024 M00237 ko00000,ko00001,ko00002,ko02000 3.A.1.4 Bacteria 1TPW4@1239,4HABJ@91061,COG0410@1,COG0410@2 NA|NA|NA E COG0410 ABC-type branched-chain amino acid transport systems, ATPase component IIAPBPCI_00868 1046629.Ssal_01826 1e-39 169.1 Bacilli acuB ko:K04767 ko00000 Bacteria 1V4CD@1239,4HGX4@91061,COG0517@1,COG0517@2 NA|NA|NA S CBS domain IIAPBPCI_00869 264199.stu0365 9.3e-42 176.0 Bacteria acuB ko:K04767 ko00000 Bacteria COG0517@1,COG0517@2 NA|NA|NA S IMP dehydrogenase activity IIAPBPCI_00870 264199.stu0366 4.9e-168 597.0 Bacilli cysK GO:0000096,GO:0000097,GO:0000098,GO:0003674,GO:0003824,GO:0004122,GO:0004124,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006555,GO:0006563,GO:0006790,GO:0006807,GO:0008134,GO:0008144,GO:0008150,GO:0008152,GO:0008284,GO:0008652,GO:0009056,GO:0009058,GO:0009063,GO:0009066,GO:0009068,GO:0009069,GO:0009070,GO:0009087,GO:0009987,GO:0016043,GO:0016053,GO:0016054,GO:0016740,GO:0016765,GO:0016829,GO:0016835,GO:0016836,GO:0016846,GO:0019344,GO:0019752,GO:0019842,GO:0022607,GO:0030170,GO:0032991,GO:0032993,GO:0036094,GO:0042127,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043388,GO:0043436,GO:0043933,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044272,GO:0044273,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046395,GO:0046983,GO:0048037,GO:0048518,GO:0048522,GO:0050662,GO:0050789,GO:0050794,GO:0051098,GO:0051099,GO:0051101,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0051291,GO:0065003,GO:0065007,GO:0065009,GO:0070279,GO:0071704,GO:0071840,GO:0080146,GO:0097159,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901607,GO:1904796,GO:1904798,GO:2000677,GO:2000679 2.5.1.47 ko:K01738 ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230 M00021 R00897,R03601,R04859 RC00020,RC02814,RC02821 ko00000,ko00001,ko00002,ko01000 Bacteria 1TP30@1239,4HAMU@91061,COG0031@1,COG0031@2 NA|NA|NA E Belongs to the cysteine synthase cystathionine beta- synthase family IIAPBPCI_00871 322159.STER_0405 6.3e-111 406.8 Bacilli yvyE 3.4.13.9 ko:K01271 ko00000,ko01000,ko01002 Bacteria 1V6MQ@1239,4HBIT@91061,COG1739@1,COG1739@2 NA|NA|NA S YigZ family IIAPBPCI_00872 322159.STER_0406 2e-252 877.9 Bacilli comFA GO:0003674,GO:0003678,GO:0003824,GO:0004003,GO:0004386,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006268,GO:0006270,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032392,GO:0032508,GO:0033554,GO:0034641,GO:0034645,GO:0042623,GO:0043138,GO:0043140,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0046483,GO:0050896,GO:0051276,GO:0051716,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360,GO:1901576 ko:K02240 M00429 ko00000,ko00002,ko02044 3.A.11.1 Bacteria 1TPZE@1239,4HB00@91061,COG4098@1,COG4098@2 NA|NA|NA L Superfamily II DNA RNA helicase required for DNA uptake (late competence protein) IIAPBPCI_00873 264199.stu0369 4.9e-122 443.7 Bacilli comFC ko:K02242 M00429 ko00000,ko00002,ko02044 Bacteria 1V73S@1239,4HJ6R@91061,COG1040@1,COG1040@2 NA|NA|NA S Competence protein IIAPBPCI_00874 264199.stu0370 2.4e-90 338.2 Bacilli hpf GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006417,GO:0006448,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015935,GO:0017148,GO:0019222,GO:0022626,GO:0022627,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0043021,GO:0043022,GO:0043024,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044877,GO:0045900,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0080090,GO:1990904,GO:2000112,GO:2000113 ko:K05808 ko00000,ko03009 Bacteria 1V1D5@1239,4HFX9@91061,COG1544@1,COG1544@2 NA|NA|NA J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase IIAPBPCI_00881 322159.STER_0151 3.2e-231 807.4 Firmicutes ko:K07485 ko00000 Bacteria 1TQ93@1239,COG3464@1,COG3464@2 NA|NA|NA L Transposase IIAPBPCI_00882 264199.stu0372 1e-165 589.3 Bacilli ppaC GO:0003674,GO:0003824,GO:0004427,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006793,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0044237,GO:0044424,GO:0044464 3.6.1.1 ko:K15986 ko00190,map00190 ko00000,ko00001,ko01000 Bacteria 1TPH6@1239,4H9T8@91061,COG1227@1,COG1227@2 NA|NA|NA C inorganic pyrophosphatase IIAPBPCI_00883 322159.STER_0367 5.7e-222 776.5 Bacilli Bacteria 1TP4C@1239,4HAXJ@91061,COG3328@1,COG3328@2 NA|NA|NA L Transposase IIAPBPCI_00884 264199.stu0373 4.1e-107 394.0 Bacilli Bacteria 1W4V4@1239,2F8BM@1,340QP@2,4HR72@91061 NA|NA|NA S Domain of unknown function (DUF1803) IIAPBPCI_00885 264199.stu0374 7.8e-102 376.3 Bacilli ygaC ko:K07586 ko00000 Bacteria 1TRX8@1239,4H9NM@91061,COG3557@1,COG3557@2 NA|NA|NA J Belongs to the UPF0374 family IIAPBPCI_00886 264199.stu0375 7.3e-133 479.9 Bacilli recX GO:0003674,GO:0005488,GO:0005515,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0019899,GO:0031668,GO:0033554,GO:0043086,GO:0044092,GO:0050790,GO:0050896,GO:0051716,GO:0065007,GO:0065009,GO:0071496 2.4.1.337 ko:K03565,ko:K19002 ko00561,ko01100,map00561,map01100 R10850 RC00005,RC00059 ko00000,ko00001,ko01000,ko01003,ko03400 GT4 Bacteria 1V72V@1239,4HKE3@91061,COG2137@1,COG2137@2 NA|NA|NA S Regulatory protein RecX IIAPBPCI_00887 264199.stu0376 1.4e-259 901.7 Bacilli rumA 2.1.1.190,2.1.1.35 ko:K00557,ko:K03215 ko00000,ko01000,ko03009,ko03016 Bacteria 1TP4H@1239,4HA6M@91061,COG2265@1,COG2265@2 NA|NA|NA J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family IIAPBPCI_00888 322159.STER_0424 6.7e-192 676.4 Bacilli asnA GO:0003674,GO:0003824,GO:0004071,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006528,GO:0006529,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009987,GO:0016053,GO:0016211,GO:0016874,GO:0016879,GO:0016880,GO:0019752,GO:0032787,GO:0033554,GO:0034641,GO:0042802,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0050896,GO:0051716,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.1.1 ko:K01914 ko00250,ko00460,ko01100,ko01110,ko01230,map00250,map00460,map01100,map01110,map01230 R00483 RC00010 ko00000,ko00001,ko01000 iAPECO1_1312.APECO1_2719,iECOK1_1307.ECOK1_4193,iECS88_1305.ECS88_4166,iUMN146_1321.UM146_18910,iUTI89_1310.UTI89_C4299 Bacteria 1TP28@1239,4HAEC@91061,COG2502@1,COG2502@2 NA|NA|NA E aspartate--ammonia ligase IIAPBPCI_00889 322159.STER_0425 5.9e-255 886.3 Bacilli lysC GO:0000166,GO:0003674,GO:0003824,GO:0004072,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006553,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0017076,GO:0019202,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046451,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.4 ko:K00928 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 M00016,M00017,M00018,M00033,M00525,M00526,M00527 R00480 RC00002,RC00043 ko00000,ko00001,ko00002,ko01000 iYO844.BSU03790 Bacteria 1TPQJ@1239,4HAEP@91061,COG0527@1,COG0527@2 NA|NA|NA E Belongs to the aspartokinase family IIAPBPCI_00890 322159.STER_0426 1.6e-114 418.7 Bacilli Bacteria 1V7XM@1239,4IPJK@91061,COG0637@1,COG0637@2 NA|NA|NA S Haloacid dehalogenase-like hydrolase IIAPBPCI_00891 264199.stu0380 1e-137 496.1 Bacilli phaB GO:0003674,GO:0003824,GO:0004300,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006635,GO:0006636,GO:0008150,GO:0008152,GO:0008610,GO:0009056,GO:0009058,GO:0009062,GO:0009987,GO:0016042,GO:0016053,GO:0016054,GO:0016829,GO:0016835,GO:0016836,GO:0016853,GO:0016860,GO:0016863,GO:0019395,GO:0019752,GO:0030258,GO:0032787,GO:0033559,GO:0034017,GO:0034440,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044249,GO:0044255,GO:0044281,GO:0044282,GO:0044283,GO:0046394,GO:0046395,GO:0055114,GO:0071704,GO:0072329,GO:0072330,GO:1901575,GO:1901576 5.3.3.14,5.3.3.18 ko:K15866,ko:K18474 ko00061,ko00360,ko01120,map00061,map00360,map01120 R07639,R09837,R09839 RC00004,RC00326,RC01078,RC02689,RC03003 ko00000,ko00001,ko01000,ko01004 Bacteria 1TQ2V@1239,4HBT0@91061,COG1024@1,COG1024@2 NA|NA|NA I Belongs to the enoyl-CoA hydratase isomerase family IIAPBPCI_00892 904306.HMPREF9192_0286 2.3e-72 278.1 Bacilli marR Bacteria 1V6GY@1239,4HIMR@91061,COG1846@1,COG1846@2 NA|NA|NA K Transcriptional regulator, MarR family IIAPBPCI_00893 322159.STER_0429 2.3e-173 614.8 Bacilli fabH 2.3.1.180 ko:K00648 ko00061,ko01100,ko01212,map00061,map01100,map01212 M00082,M00083 R10707 RC00004,RC02729,RC02888 ko00000,ko00001,ko00002,ko01000,ko01004 Bacteria 1TP0K@1239,4HATK@91061,COG0332@1,COG0332@2 NA|NA|NA I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids IIAPBPCI_00894 435842.HMPREF0848_00012 2.6e-30 137.5 Bacilli acpP GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 ko:K02078 ko00000,ko00001 Bacteria 1VGIY@1239,4HP0V@91061,COG0236@1,COG0236@2 NA|NA|NA IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis IIAPBPCI_00895 322159.STER_0431 6.8e-173 613.2 Bacilli fabK 1.3.1.9 ko:K02371 ko00061,ko01100,ko01212,map00061,map01100,map01212 M00083 R04429,R04724,R04955,R04958,R04961,R04966,R04969,R07765 RC00052,RC00076 ko00000,ko00001,ko00002,ko01000,ko01004 iHN637.CLJU_RS20775 Bacteria 1TPC3@1239,4H9T0@91061,COG2070@1,COG2070@2 NA|NA|NA S 2-Nitropropane dioxygenase IIAPBPCI_00896 264199.stu0386 1.9e-164 585.1 Bacilli fabD 2.3.1.39 ko:K00645 ko00061,ko00333,ko01100,ko01130,ko01212,map00061,map00333,map01100,map01130,map01212 M00082 R01626,R11671 RC00004,RC00039,RC02727 ko00000,ko00001,ko00002,ko01000,ko01004 Bacteria 1TPB7@1239,4HBCU@91061,COG0331@1,COG0331@2 NA|NA|NA I Malonyl CoA-acyl carrier protein transacylase IIAPBPCI_00897 322159.STER_0433 1.6e-126 458.8 Bacilli Bacteria 1TP76@1239,4HAA6@91061,COG1028@1,COG1028@2 NA|NA|NA IQ reductase IIAPBPCI_00898 322159.STER_0434 1.5e-233 815.1 Bacilli fabF 2.3.1.179 ko:K09458 ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212 M00083,M00572 R04355,R04726,R04952,R04957,R04960,R04963,R04968,R07762,R10115,R10119 RC00039,RC02728,RC02729,RC02888 ko00000,ko00001,ko00002,ko01000,ko01004 Bacteria 1TPA7@1239,4H9SD@91061,COG0304@1,COG0304@2 NA|NA|NA I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP IIAPBPCI_00899 322159.STER_0435 7e-57 226.9 Bacilli accB 2.3.1.12,4.1.1.3 ko:K00627,ko:K01571,ko:K02160 ko00010,ko00020,ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00010,map00020,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212 M00082,M00307,M00376 R00209,R00217,R00742,R02569 RC00004,RC00040,RC00367,RC02742,RC02857 br01601,ko00000,ko00001,ko00002,ko01000,ko02000 3.B.1.1.1 Bacteria 1VAB7@1239,4HKCS@91061,COG0511@1,COG0511@2 NA|NA|NA I first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA IIAPBPCI_00900 1046629.Ssal_01800 4.3e-71 273.9 Bacilli fabZ 3.5.1.108,4.2.1.59 ko:K02372,ko:K16363 ko00061,ko00540,ko00780,ko01100,ko01212,map00061,map00540,map00780,map01100,map01212 M00060,M00083,M00572 R04428,R04535,R04537,R04544,R04568,R04587,R04954,R04965,R07764,R10117,R10121 RC00166,RC00300,RC00831,RC01095 ko00000,ko00001,ko00002,ko01000,ko01004,ko01005 Bacteria 1V6EX@1239,4HGX1@91061,COG0764@1,COG0764@2 NA|NA|NA I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs IIAPBPCI_00901 322159.STER_0437 1.4e-256 891.7 Bacilli accC GO:0003674,GO:0003824,GO:0004075,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010565,GO:0016053,GO:0016874,GO:0016879,GO:0019216,GO:0019217,GO:0019222,GO:0019752,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032787,GO:0042304,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045717,GO:0045833,GO:0045922,GO:0046394,GO:0046890,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051055,GO:0062012,GO:0062014,GO:0065007,GO:0071704,GO:0072330,GO:0080090,GO:1901576 6.3.4.14,6.4.1.2 ko:K01961 ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212 M00082,M00376 R00742,R04385 RC00040,RC00253,RC00367 ko00000,ko00001,ko00002,ko01000 iSF_1195.SF3294 Bacteria 1TP16@1239,4HARK@91061,COG0439@1,COG0439@2 NA|NA|NA I An AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism IIAPBPCI_00902 322159.STER_0438 1.1e-158 565.8 Bacilli accD 2.1.3.15,6.4.1.2 ko:K01962,ko:K01963 ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212 M00082,M00376 R00742,R04386 RC00040,RC00253,RC00367 ko00000,ko00001,ko00002,ko01000 Bacteria 1TP4U@1239,4HAI7@91061,COG0777@1,COG0777@2 NA|NA|NA I Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA IIAPBPCI_00903 322159.STER_0439 1.5e-138 498.8 Bacilli accA 2.1.3.15,6.4.1.2 ko:K01962,ko:K01963 ko00061,ko00620,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00620,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212 M00082,M00376 R00742,R04386 RC00040,RC00253,RC00367 ko00000,ko00001,ko00002,ko01000 Bacteria 1UHNS@1239,4HA4C@91061,COG0825@1,COG0825@2 NA|NA|NA I Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA IIAPBPCI_00904 1046629.Ssal_01795 4.7e-90 337.0 Bacilli luxS GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0007154,GO:0007267,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009069,GO:0009086,GO:0009116,GO:0009119,GO:0009372,GO:0009987,GO:0010699,GO:0016053,GO:0016829,GO:0016846,GO:0017144,GO:0019284,GO:0019752,GO:0023052,GO:0033353,GO:0034641,GO:0042278,GO:0043094,GO:0043102,GO:0043436,GO:0043768,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044764,GO:0046128,GO:0046394,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0051186,GO:0051704,GO:0055086,GO:0071265,GO:0071267,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1901657 4.4.1.21 ko:K07173 ko00270,ko01100,ko01230,ko02024,ko02026,ko05111,map00270,map01100,map01230,map02024,map02026,map05111 M00609 R01291 RC00069,RC01929 ko00000,ko00001,ko00002,ko01000 iECIAI39_1322.ECIAI39_2877,iPC815.YPO3300 Bacteria 1V1V3@1239,4HFR0@91061,COG1854@1,COG1854@2 NA|NA|NA H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD) IIAPBPCI_00905 264199.stu0397 1.3e-205 722.6 Bacilli rny GO:0003674,GO:0005488,GO:0005515,GO:0042802 ko:K05802,ko:K18682 ko03018,map03018 ko00000,ko00001,ko01000,ko02000,ko03019 1.A.23.1.1 Bacteria 1TP48@1239,4HC9J@91061,COG1418@1,COG1418@2,COG4372@1,COG4372@2 NA|NA|NA D Endoribonuclease that initiates mRNA decay IIAPBPCI_00906 264199.stu0398 1.8e-84 318.5 Firmicutes ko:K07485 ko00000 Bacteria 1TQ93@1239,COG3464@1,COG3464@2 NA|NA|NA L Transposase IIAPBPCI_00907 904306.HMPREF9192_0316 1.2e-121 442.6 Bacilli fruR ko:K03436 ko00000,ko03000 Bacteria 1TSF8@1239,4HDT9@91061,COG1349@1,COG1349@2 NA|NA|NA K transcriptional IIAPBPCI_00908 264199.stu0400 3.8e-165 587.4 Bacilli pfkB 2.7.1.11,2.7.1.56 ko:K00882,ko:K16370 ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130,map01200,map01230 M00001,M00345 R00756,R02071,R03236,R03237,R03238,R03239,R04779 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 Bacteria 1TQ36@1239,4HANU@91061,COG1105@1,COG1105@2 NA|NA|NA H Belongs to the carbohydrate kinase PfkB family. LacC subfamily IIAPBPCI_00909 1046629.Ssal_01791 0.0 1173.7 Bacilli fruA 2.7.1.202 ko:K02768,ko:K02769,ko:K02770,ko:K02806 ko00051,ko01100,ko01120,ko02060,map00051,map01100,map01120,map02060 M00273 R03232 RC00017,RC03206 ko00000,ko00001,ko00002,ko01000,ko02000 4.A.2.1 Bacteria 1TPKU@1239,4H9KR@91061,COG1299@1,COG1299@2,COG1445@1,COG1445@2,COG1762@1,COG1762@2 NA|NA|NA G phosphotransferase system IIAPBPCI_00910 264199.stu0408 3e-259 900.6 Bacilli gor GO:0000166,GO:0003674,GO:0003824,GO:0004362,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0015036,GO:0015037,GO:0015038,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0036094,GO:0042221,GO:0043167,GO:0043168,GO:0044424,GO:0044464,GO:0048037,GO:0050660,GO:0050662,GO:0050896,GO:0051716,GO:0055114,GO:0070887,GO:0071949,GO:0097159,GO:0097237,GO:0098754,GO:0098869,GO:1901265,GO:1901363,GO:1990748 1.8.1.7 ko:K00383 ko00480,ko04918,map00480,map04918 R00094,R00115 RC00011 ko00000,ko00001,ko01000 iZ_1308.Z4900 Bacteria 1TQFH@1239,4HCT8@91061,COG1249@1,COG1249@2 NA|NA|NA C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family IIAPBPCI_00911 264199.stu0409 1.5e-241 841.6 Bacilli folC 6.3.2.12,6.3.2.17 ko:K11754 ko00790,ko01100,map00790,map01100 M00126,M00841 R00942,R02237,R04241 RC00064,RC00090,RC00162 ko00000,ko00001,ko00002,ko01000 iLJ478.TM0166 Bacteria 1TPX5@1239,4HBJM@91061,COG0285@1,COG0285@2 NA|NA|NA H Belongs to the folylpolyglutamate synthase family IIAPBPCI_00913 264199.stu0411 1.2e-208 732.3 Bacilli iscS2 2.8.1.7 ko:K04487 ko00730,ko01100,ko04122,map00730,map01100,map04122 R07460,R11528,R11529 RC01789,RC02313 ko00000,ko00001,ko01000,ko02048,ko03016,ko03029 Bacteria 1TP21@1239,4HAEE@91061,COG1104@1,COG1104@2 NA|NA|NA E Cysteine sulfinate desulfinase cysteine desulfurase and related enzymes IIAPBPCI_00914 264199.stu0412 1.2e-225 788.9 Bacilli thiI GO:0000049,GO:0002937,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0017144,GO:0018130,GO:0019438,GO:0034227,GO:0034470,GO:0034641,GO:0034660,GO:0042364,GO:0042723,GO:0042724,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:0090304,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.8.1.4 ko:K03151 ko00730,ko01100,ko04122,map00730,map01100,map04122 R07461 ko00000,ko00001,ko01000,ko03016 iECNA114_1301.ECNA114_0400,iECO26_1355.ECO26_0455,iECSF_1327.ECSF_0383,iSDY_1059.SDY_0307 Bacteria 1TPNW@1239,4HAV9@91061,COG0301@1,COG0301@2 NA|NA|NA H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS IIAPBPCI_00915 322159.STER_0452 4.9e-295 1019.6 Bacilli gtf1 2.4.1.52 ko:K00712 ko00000,ko01000,ko01003 GT4 Bacteria 1TR6K@1239,4HGDG@91061,COG0438@1,COG0438@2 NA|NA|NA M An N-acetylglucosaminyl transferase that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon IIAPBPCI_00916 264199.stu0414 3e-256 890.6 Firmicutes gtf2 Bacteria 1TQZR@1239,COG0438@1,COG0438@2 NA|NA|NA M A stabilizing protein that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon. Stabilizes the glycosylation activity of Gtf1 IIAPBPCI_00917 1046629.Ssal_01780 4.9e-39 167.2 Bacteria 2.3.1.128 ko:K03789 ko00000,ko01000,ko03009 Bacteria COG0454@1,COG0456@2 NA|NA|NA K acetyltransferase IIAPBPCI_00918 1046629.Ssal_01780 6.4e-29 132.9 Bacteria 2.3.1.128 ko:K03789 ko00000,ko01000,ko03009 Bacteria COG0454@1,COG0456@2 NA|NA|NA K acetyltransferase IIAPBPCI_00919 264199.stu0417 4.5e-49 200.3 Bacilli rplU GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02888 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1V9YH@1239,4HIGK@91061,COG0261@1,COG0261@2 NA|NA|NA J This protein binds to 23S rRNA in the presence of protein L20 IIAPBPCI_00920 1046629.Ssal_01778 1.5e-46 191.8 Bacilli rpmA GO:0000027,GO:0001558,GO:0003674,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0030312,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0040008,GO:0042254,GO:0042255,GO:0042256,GO:0042273,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044877,GO:0048518,GO:0050789,GO:0050794,GO:0051128,GO:0065003,GO:0065007,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0090069,GO:0090070,GO:1901564,GO:1901566,GO:1901576,GO:1902626,GO:1990904 ko:K02899 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1V6HW@1239,4HIMN@91061,COG0211@1,COG0211@2 NA|NA|NA J Belongs to the bacterial ribosomal protein bL27 family IIAPBPCI_00921 322159.STER_0457 6.7e-122 443.4 Bacteria ydaF_2 Bacteria COG1670@1,COG1670@2 NA|NA|NA J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins IIAPBPCI_00922 322159.STER_0458 2.6e-64 251.1 Bacilli WQ51_03320 Bacteria 1VHA6@1239,4HPTC@91061,COG4835@1,COG4835@2 NA|NA|NA S cog cog4835 IIAPBPCI_00923 904306.HMPREF9192_0332 6.4e-61 240.0 Bacilli XK27_08360 Bacteria 1TRM7@1239,4HVKJ@91061,COG1307@1,COG1307@2 NA|NA|NA S EDD domain protein, DegV family IIAPBPCI_00924 904306.HMPREF9192_0332 5.5e-75 287.0 Bacilli XK27_08360 Bacteria 1TRM7@1239,4HVKJ@91061,COG1307@1,COG1307@2 NA|NA|NA S EDD domain protein, DegV family IIAPBPCI_00925 264199.stu0424 5.1e-139 500.4 Bacilli dapB GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008839,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016020,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0019752,GO:0019877,GO:0030312,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0048037,GO:0050661,GO:0050662,GO:0051287,GO:0055114,GO:0070402,GO:0070404,GO:0071704,GO:0071944,GO:0097159,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.17.1.8 ko:K00215 ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230 M00016,M00525,M00526,M00527 R04198,R04199 RC00478 ko00000,ko00001,ko00002,ko01000 iJN678.dapB,iNJ661.Rv2773c,iYO844.BSU22490 Bacteria 1TR9D@1239,4HA5X@91061,COG0289@1,COG0289@2 NA|NA|NA E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate IIAPBPCI_00926 264199.stu0425 7.4e-225 786.2 Bacilli cca 2.7.7.19,2.7.7.72 ko:K00970,ko:K00974 ko03013,ko03018,map03013,map03018 R09382,R09383,R09384,R09386 RC00078 ko00000,ko00001,ko01000,ko03016,ko03019 Bacteria 1TQ2A@1239,4HB2W@91061,COG0617@1,COG0617@2 NA|NA|NA J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate IIAPBPCI_00927 322159.STER_0462 0.0 1198.0 Bacilli yfmR ko:K15738 ko00000,ko02000 3.A.1.120.6 Bacteria 1TPAX@1239,4H9TK@91061,COG0488@1,COG0488@2 NA|NA|NA S abc transporter atp-binding protein IIAPBPCI_00928 1123298.KB904062_gene886 3.3e-25 121.7 Bacteria Bacteria COG3247@1,COG3247@2 NA|NA|NA U response to pH IIAPBPCI_00929 322159.STER_0465 1e-139 502.7 Bacilli 3.6.1.13,3.6.1.55 ko:K01515,ko:K03574 ko00230,map00230 R01054 RC00002 ko00000,ko00001,ko01000,ko03400 Bacteria 1TST7@1239,4HEFP@91061,COG1051@1,COG1051@2 NA|NA|NA F AdP-ribose pyrophosphatase IIAPBPCI_00930 264199.stu0429 1.2e-163 582.4 Bacilli nadD 2.7.1.22,2.7.7.1,2.7.7.18,3.6.1.55 ko:K00969,ko:K03574,ko:K06211 ko00760,ko01100,map00760,map01100 M00115 R00137,R02324,R03005 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000,ko03000,ko03400 iIT341.HP1337 Bacteria 1TQ29@1239,4HBZT@91061,COG1057@1,COG1057@2,COG3172@1,COG3172@2 NA|NA|NA H adenylyltransferase IIAPBPCI_00931 264199.stu0430 6.9e-256 889.4 Bacilli gdhA 1.4.1.4 ko:K00262 ko00220,ko00250,ko00910,ko01100,map00220,map00250,map00910,map01100 R00248 RC00006,RC02799 ko00000,ko00001,ko01000 Bacteria 1TP45@1239,4HAEI@91061,COG0334@1,COG0334@2 NA|NA|NA E Belongs to the Glu Leu Phe Val dehydrogenases family IIAPBPCI_00932 322159.STER_0468 8.7e-69 266.2 Bacilli def_1 3.5.1.31,3.5.1.88 ko:K01450,ko:K01462 ko00270,ko00630,map00270,map00630 R00653 RC00165,RC00323 ko00000,ko00001,ko01000 Bacteria 1V73T@1239,4HGYC@91061,COG0242@1,COG0242@2 NA|NA|NA J Removes the formyl group from the N-terminal Met of newly synthesized proteins IIAPBPCI_00933 264199.stu0432 7.2e-77 293.1 Bacteria Bacteria COG1846@1,COG1846@2 NA|NA|NA K DNA-binding transcription factor activity IIAPBPCI_00934 264199.stu0433 0.0 1077.4 Bacilli lmrA1 ko:K02021,ko:K06147,ko:K06148,ko:K18887 ko02010,map02010 M00706 ko00000,ko00001,ko00002,ko02000 3.A.1,3.A.1.106,3.A.1.109,3.A.1.110,3.A.1.112,3.A.1.113,3.A.1.117,3.A.1.21 Bacteria 1TP0B@1239,4H9SC@91061,COG1132@1,COG1132@2 NA|NA|NA V abc transporter atp-binding protein IIAPBPCI_00935 264199.stu0434 0.0 1121.7 Bacilli lmrA2 ko:K06147 ko00000,ko02000 3.A.1.106,3.A.1.109,3.A.1.21 Bacteria 1TP0B@1239,4HA3S@91061,COG1132@1,COG1132@2 NA|NA|NA V abc transporter atp-binding protein IIAPBPCI_00936 1046629.Ssal_01762 1.4e-45 188.7 Bacilli Bacteria 1VF01@1239,4HPKN@91061,COG0454@1,COG0456@2 NA|NA|NA K Acetyltransferase (GNAT) family IIAPBPCI_00937 264199.stu0437 4.5e-77 293.9 Bacilli sptS 2.7.13.3 ko:K11328 ko02020,map02020 M00464 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Bacteria 1UHQH@1239,4HAHG@91061,COG0642@1,COG0642@2 NA|NA|NA T Histidine kinase IIAPBPCI_00938 322159.STER_0474 4.9e-131 473.8 Bacilli pyrH GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006213,GO:0006220,GO:0006221,GO:0006225,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009163,GO:0009165,GO:0009185,GO:0009188,GO:0009193,GO:0009194,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0015949,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0033862,GO:0034404,GO:0034641,GO:0034654,GO:0040007,GO:0042455,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044464,GO:0046048,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0046872,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0071944,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.7.4.22 ko:K09903 ko00240,ko01100,map00240,map01100 R00158 RC00002 ko00000,ko00001,ko01000 iSB619.SA_RS06240 Bacteria 1TPXN@1239,4H9UB@91061,COG0528@1,COG0528@2 NA|NA|NA F Catalyzes the reversible phosphorylation of UMP to UDP IIAPBPCI_00939 322159.STER_0475 1.3e-91 342.4 Bacilli frr GO:0002181,GO:0002184,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0022411,GO:0030312,GO:0032984,GO:0034641,GO:0034645,GO:0040007,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 ko:K02838 ko00000,ko03012 Bacteria 1V1F2@1239,4HFSH@91061,COG0233@1,COG0233@2 NA|NA|NA J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another IIAPBPCI_00940 322159.STER_0476 7e-161 573.2 Bacilli cvfB ko:K00243 ko00000 Bacteria 1TQ1Z@1239,4HDAZ@91061,COG2996@1,COG2996@2 NA|NA|NA S Protein conserved in bacteria IIAPBPCI_00941 264199.stu0441 7.4e-35 152.5 Bacilli yozE Bacteria 1VFI4@1239,4HR7P@91061,COG4479@1,COG4479@2 NA|NA|NA S Belongs to the UPF0346 family IIAPBPCI_00942 264199.stu0442 1.4e-113 416.8 Bacteria usp 3.5.1.104,3.5.1.28 ko:K15125,ko:K17733,ko:K21449,ko:K21471,ko:K22278,ko:K22409 ko05133,map05133 ko00000,ko00001,ko00536,ko01000,ko01002,ko01011,ko02000 1.B.40.2 CBM50 Bacteria COG1388@1,COG1388@2,COG3942@1,COG3942@2 NA|NA|NA S pathogenesis IIAPBPCI_00943 264199.stu0446 1.7e-60 238.8 Bacilli rlpA ko:K03642 ko00000 Bacteria 1V61Q@1239,4HHT0@91061,COG1388@1,COG1388@2 NA|NA|NA M LysM domain protein IIAPBPCI_00944 322159.STER_0480 1e-190 672.5 Bacilli phoH GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K06217 ko00000 Bacteria 1TP35@1239,4HBD5@91061,COG1702@1,COG1702@2 NA|NA|NA T phosphate starvation-inducible protein PhoH IIAPBPCI_00948 264199.stu0451 0.0 1342.8 Bacilli metG GO:0003674,GO:0003824,GO:0004812,GO:0004825,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006431,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0040007,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.10,6.1.1.20 ko:K01874,ko:K01890,ko:K06878 ko00450,ko00970,map00450,map00970 M00359,M00360 R03659,R03660,R04773 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Bacteria 1TPA1@1239,4H9VC@91061,COG0073@1,COG0073@2,COG0143@1,COG0143@2 NA|NA|NA J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation IIAPBPCI_00949 904306.HMPREF9192_0361 3.5e-163 580.9 Bacilli Bacteria 1V53I@1239,4HIEU@91061,COG0583@1,COG0583@2 NA|NA|NA K transcriptional regulator (lysR family) IIAPBPCI_00950 322159.STER_0488 1.4e-186 658.7 Bacilli coiA 3.6.4.12 ko:K03657,ko:K06198 ko03420,ko03430,map03420,map03430 ko00000,ko00001,ko01000,ko03400 Bacteria 1TRGD@1239,4HFP5@91061,COG4469@1,COG4469@2 NA|NA|NA S Competence protein IIAPBPCI_00951 322159.STER_0489 0.0 1199.9 Bacilli pepF GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006465,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009987,GO:0010467,GO:0016485,GO:0016787,GO:0019538,GO:0034641,GO:0043170,GO:0043603,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0051604,GO:0070011,GO:0071704,GO:0140096,GO:1901564 ko:K08602 ko00000,ko01000,ko01002 Bacteria 1TP4P@1239,4HA7X@91061,COG1164@1,COG1164@2 NA|NA|NA E oligoendopeptidase F IIAPBPCI_00952 264199.stu0455 7.1e-127 459.9 Bacilli yrrM 2.1.1.104 ko:K00588 ko00360,ko00940,ko00941,ko00945,ko01100,ko01110,map00360,map00940,map00941,map00945,map01100,map01110 M00039,M00350 R01942,R06578 RC00003,RC00392 ko00000,ko00001,ko00002,ko01000 Bacteria 1UF4M@1239,4HE9E@91061,COG4122@1,COG4122@2 NA|NA|NA S O-Methyltransferase IIAPBPCI_00953 322159.STER_0492 8.6e-167 593.2 Bacteria prsA 3.1.3.16,5.2.1.8 ko:K01802,ko:K03769,ko:K07533,ko:K20074 ko00000,ko01000,ko01009,ko03110 Bacteria COG0760@1,COG0760@2 NA|NA|NA O peptidyl-prolyl cis-trans isomerase activity IIAPBPCI_00955 862969.SCI_0175 8.2e-96 357.1 Streptococcus anginosus group repA Bacteria 1VHQA@1239,2DP1C@1,3304N@2,42DYE@671232,4HPY6@91061 NA|NA|NA S Replication initiator protein A (RepA) N-terminus IIAPBPCI_00956 1035184.HMPREF1042_2353 1.7e-38 165.2 Streptococcus anginosus group Bacteria 1TW11@1239,2DIUA@1,3044T@2,42EI4@671232,4I4PX@91061 NA|NA|NA IIAPBPCI_00957 1035184.HMPREF1042_2352 4e-40 170.6 Bacteria Bacteria COG4443@1,COG4443@2 NA|NA|NA S Transcriptional Coactivator p15 (PC4) IIAPBPCI_00959 1035184.HMPREF1042_2350 3e-104 384.8 Streptococcus anginosus group Bacteria 1VY42@1239,2EFFF@1,33986@2,42EEK@671232,4HMPN@91061 NA|NA|NA IIAPBPCI_00961 1000570.HMPREF9966_1913 5e-12 77.4 Streptococcus anginosus group Bacteria 1TVYC@1239,2DITG@1,3043I@2,42EER@671232,4I4K8@91061 NA|NA|NA S PrgI family protein IIAPBPCI_00962 1035184.HMPREF1042_2347 0.0 1408.3 Bacilli Bacteria 1TPDR@1239,4HC47@91061,COG3451@1,COG3451@2 NA|NA|NA U Psort location Cytoplasmic, score IIAPBPCI_00963 873447.SPB_0377 0.0 1174.5 Bacilli Bacteria 1VPFZ@1239,4HFGV@91061,COG3942@1,COG3942@2 NA|NA|NA M CHAP domain protein IIAPBPCI_00964 862969.SCI_0185 1.1e-104 386.0 Bacilli Bacteria 1VDM9@1239,2DNFF@1,32X8K@2,4HNCS@91061 NA|NA|NA IIAPBPCI_00966 1035184.HMPREF1042_2341 8.5e-67 260.8 Streptococcus anginosus group Bacteria 1TW0G@1239,2DIU0@1,3044E@2,42EHD@671232,4I4P6@91061 NA|NA|NA IIAPBPCI_00967 1035184.HMPREF1042_2340 1e-29 137.5 Streptococcus anginosus group ko:K06236 ko04151,ko04510,ko04512,ko04611,ko04926,ko04933,ko04974,ko05146,ko05165,map04151,map04510,map04512,map04611,map04926,map04933,map04974,map05146,map05165 ko00000,ko00001,ko00536,ko04516 Bacteria 1UMUJ@1239,42EFA@671232,4IU0F@91061,COG3468@1,COG3468@2 NA|NA|NA MU outer membrane autotransporter barrel domain protein IIAPBPCI_00968 1035184.HMPREF1042_2339 5.5e-63 247.3 Streptococcus anginosus group Bacteria 1VIW8@1239,2EDAG@1,3376W@2,42EGT@671232,4HQS8@91061 NA|NA|NA IIAPBPCI_00969 862969.SCI_0190 1.8e-310 1071.2 Streptococcus anginosus group ko:K03205 ko03070,map03070 M00333 ko00000,ko00001,ko00002,ko02044 3.A.7 Bacteria 1TPCF@1239,42E83@671232,4HF20@91061,COG3505@1,COG3505@2 NA|NA|NA U Type IV secretory system Conjugative DNA transfer IIAPBPCI_00971 873447.SPB_0385 2.5e-274 951.0 Bacilli topB 5.99.1.2 ko:K03169 ko00000,ko01000,ko03032 Bacteria 1TPJD@1239,4HAZV@91061,COG0550@1,COG0550@2 NA|NA|NA L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone IIAPBPCI_00972 1035184.HMPREF1042_2335 0.0 1153.3 Streptococcus anginosus group Bacteria 1TQN4@1239,42DXU@671232,4HN8F@91061,COG0358@1,COG0358@2,COG4227@1,COG4227@2 NA|NA|NA L Toprim-like IIAPBPCI_00974 873447.SPB_0388 3.3e-35 154.5 Bacilli Bacteria 1VJAY@1239,2DPAH@1,3318H@2,4HR0E@91061 NA|NA|NA S Bacterial mobilisation protein (MobC) IIAPBPCI_00975 862969.SCI_0195 9.6e-252 875.9 Streptococcus anginosus group Bacteria 1V2SB@1239,42E61@671232,4HFEX@91061,COG3843@1,COG3843@2 NA|NA|NA U Relaxase/Mobilisation nuclease domain IIAPBPCI_00979 1035184.HMPREF1042_2326 1.3e-73 282.7 Streptococcus anginosus group tnpR Bacteria 1UZM8@1239,42EG7@671232,4IQ67@91061,COG1961@1,COG1961@2 NA|NA|NA L Resolvase, N terminal domain IIAPBPCI_00981 862970.SAIN_0380 4.5e-114 417.5 Bacilli ko:K03496 ko00000,ko03036,ko04812 Bacteria 1V6Q6@1239,4HINH@91061,COG1192@1,COG1192@2 NA|NA|NA D CobQ CobB MinD ParA nucleotide binding domain protein IIAPBPCI_00983 176090.SSIN_1129 9.5e-126 456.4 Firmicutes Bacteria 1UIB2@1239,COG3177@1,COG3177@2 NA|NA|NA S Fic/DOC family IIAPBPCI_00984 862969.SCI_0200 8.9e-163 580.1 Streptococcus anginosus group Bacteria 1V8H0@1239,2AQ9M@1,31FFI@2,42EJB@671232,4ISNC@91061 NA|NA|NA S Uncharacterised protein family (UPF0236) IIAPBPCI_00985 264199.stu0457 0.0 1717.6 Bacilli alaS GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 ko:K01872 ko00970,map00970 M00359,M00360 R03038 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Bacteria 1TPK6@1239,4H9XC@91061,COG0013@1,COG0013@2 NA|NA|NA J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain IIAPBPCI_00986 322159.STER_0495 2.5e-146 525.0 Bacilli 3.4.17.14,3.5.1.28 ko:K01448,ko:K07260,ko:K21471 ko00550,ko01100,ko01502,ko01503,ko02020,map00550,map01100,map01502,map01503,map02020 M00651,M00727 R04112 RC00064,RC00141 ko00000,ko00001,ko00002,ko01000,ko01002,ko01011,ko01504,ko03036 Bacteria 1W25V@1239,4HGXW@91061,COG0860@1,COG0860@2,COG3942@1,COG3942@2 NA|NA|NA M GBS Bsp-like repeat IIAPBPCI_00987 264199.stu0461 3.4e-41 174.9 Bacteria 3.4.17.14,3.5.1.28 ko:K01448,ko:K02395,ko:K07260 ko00550,ko01100,ko01502,ko01503,ko02020,map00550,map01100,map01502,map01503,map02020 M00651,M00727 R04112 RC00064,RC00141 ko00000,ko00001,ko00002,ko01000,ko01002,ko01011,ko01504,ko02035,ko03036 Bacteria COG1705@1,COG1705@2 NA|NA|NA NU amidase activity IIAPBPCI_00988 264199.stu0461 1.3e-30 138.3 Bacteria 3.4.17.14,3.5.1.28 ko:K01448,ko:K02395,ko:K07260 ko00550,ko01100,ko01502,ko01503,ko02020,map00550,map01100,map01502,map01503,map02020 M00651,M00727 R04112 RC00064,RC00141 ko00000,ko00001,ko00002,ko01000,ko01002,ko01011,ko01504,ko02035,ko03036 Bacteria COG1705@1,COG1705@2 NA|NA|NA NU amidase activity IIAPBPCI_00989 264199.stu0462 4.9e-145 520.4 Bacilli cnhA 3.5.1.3 ko:K11206,ko:K13566 ko00250,map00250 R00269,R00348 RC00010 ko00000,ko00001,ko01000 Bacteria 1TQDK@1239,4HC44@91061,COG0388@1,COG0388@2 NA|NA|NA S Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase IIAPBPCI_00990 322159.STER_0499 1.7e-226 791.6 Bacilli mtnE 2.6.1.83 ko:K08969,ko:K10206 ko00270,ko00300,ko01100,ko01110,ko01130,ko01230,map00270,map00300,map01100,map01110,map01130,map01230 M00034,M00527 R07396,R07613 RC00006,RC01847 ko00000,ko00001,ko00002,ko01000,ko01007 Bacteria 1TQD6@1239,4HAHQ@91061,COG0436@1,COG0436@2 NA|NA|NA E mutations do not affect methionine salvage in vivo however IIAPBPCI_00991 264199.stu0464 1.4e-189 668.7 Bacilli argC GO:0003674,GO:0003824,GO:0003942,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016491,GO:0016620,GO:0016903,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.2.1.38 ko:K00145 ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230 M00028,M00845 R03443 RC00684 ko00000,ko00001,ko00002,ko01000 iLJ478.TM1782,iSSON_1240.SSON_4131,iYO844.BSU11190 Bacteria 1TPVI@1239,4H9YD@91061,COG0002@1,COG0002@2 NA|NA|NA E Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde IIAPBPCI_00992 322159.STER_0501 1.5e-222 778.5 Bacilli argJ GO:0003674,GO:0003824,GO:0004042,GO:0004358,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006592,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.1,2.3.1.35,2.7.2.8 ko:K00620,ko:K00930 ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230 M00028 R00259,R02282,R02649 RC00002,RC00004,RC00043,RC00064 ko00000,ko00001,ko00002,ko01000 iLJ478.TM1783 Bacteria 1TPBP@1239,4H9TQ@91061,COG1364@1,COG1364@2 NA|NA|NA E Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate IIAPBPCI_00993 264199.stu0466 1.2e-129 469.2 Firmicutes argB GO:0003674,GO:0003824,GO:0003991,GO:0005488,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016597,GO:0016740,GO:0016772,GO:0016774,GO:0019752,GO:0031406,GO:0034618,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.8 ko:K00930 ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230 M00028 R02649 RC00002,RC00043 ko00000,ko00001,ko00002,ko01000 Bacteria 1TP0N@1239,COG0548@1,COG0548@2 NA|NA|NA E Belongs to the acetylglutamate kinase family. ArgB subfamily IIAPBPCI_00994 322159.STER_0503 5.3e-209 733.4 Bacilli argD GO:0003674,GO:0003824,GO:0003992,GO:0005488,GO:0005515,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0019752,GO:0019842,GO:0030170,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0048037,GO:0050662,GO:0070279,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.6.1.11,2.6.1.17 ko:K00821 ko00220,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00220,map00300,map01100,map01110,map01120,map01130,map01210,map01230 M00016,M00028,M00845 R02283,R04475 RC00006,RC00062 ko00000,ko00001,ko00002,ko01000,ko01007 Bacteria 1TP9S@1239,4H9VZ@91061,COG4992@1,COG4992@2 NA|NA|NA E acetylornithine aminotransferase IIAPBPCI_00995 322159.STER_0504 2.5e-129 468.4 Bacilli yxkH Bacteria 1V6AW@1239,4HHC9@91061,COG0726@1,COG0726@2 NA|NA|NA G deacetylase IIAPBPCI_00996 264199.stu0469 4e-237 827.0 Bacilli hom GO:0003674,GO:0003824,GO:0004412,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006082,GO:0006520,GO:0006566,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009088,GO:0009987,GO:0016020,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0030312,GO:0040007,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.3,2.7.2.4 ko:K00003,ko:K12524 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01230 M00016,M00017,M00018,M00526,M00527 R00480,R01773,R01775 RC00002,RC00043,RC00087 ko00000,ko00001,ko00002,ko01000 iNJ661.Rv1294,iSB619.SA_RS06610 Bacteria 1TQ2H@1239,4HBAP@91061,COG0460@1,COG0460@2 NA|NA|NA E homoserine dehydrogenase IIAPBPCI_00997 1046629.Ssal_01693 4.2e-150 537.3 Bacilli thrB GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004413,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006555,GO:0006566,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009069,GO:0009086,GO:0009088,GO:0009092,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019202,GO:0019752,GO:0040007,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.1.39 ko:K00872 ko00260,ko01100,ko01110,ko01120,ko01230,map00260,map01100,map01110,map01120,map01230 M00018 R01771 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 iECSE_1348.ECSE_0003,iJN678.thrB,iLJ478.TM0545 Bacteria 1TRWS@1239,4HCQN@91061,COG0083@1,COG0083@2 NA|NA|NA E Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate IIAPBPCI_00998 264199.stu0471 1e-151 542.7 Bacilli rarD GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0016021,GO:0031224,GO:0044425,GO:0044464,GO:0071944 ko:K05786 ko00000,ko02000 2.A.7.7 Bacteria 1TQF2@1239,4HAYU@91061,COG2962@1,COG2962@2 NA|NA|NA S Transporter IIAPBPCI_00999 1123315.AUIP01000020_gene2219 2.6e-16 92.4 Bacteria Bacteria COG3212@1,COG3212@2 NA|NA|NA T peptidase IIAPBPCI_01000 1123314.AUIO01000005_gene141 8.9e-14 82.4 Bacilli coiA 3.6.4.12 ko:K03657,ko:K06198 ko03420,ko03430,map03420,map03430 ko00000,ko00001,ko01000,ko03400 Bacteria 1TRGD@1239,4HFP5@91061,COG4469@1,COG4469@2 NA|NA|NA S Competence protein IIAPBPCI_01001 322159.STER_0511 8.3e-105 386.3 Bacilli Bacteria 1VENC@1239,4HQ31@91061,COG1853@1,COG1853@2 NA|NA|NA S COG1853 Conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family IIAPBPCI_01002 322159.STER_0512 8.1e-69 266.2 Bacteria 2.3.1.128,5.2.1.8 ko:K03768,ko:K03790 ko00000,ko01000,ko03009,ko03110 Bacteria COG1670@1,COG1670@2 NA|NA|NA J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins IIAPBPCI_01003 322159.STER_0513 0.0 1745.3 Bacilli valS GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 ko:K01873 ko00970,map00970 M00359,M00360 R03665 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 iLJ478.TM1817 Bacteria 1TPN4@1239,4HB85@91061,COG0525@1,COG0525@2 NA|NA|NA J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner IIAPBPCI_01004 1123298.KB904069_gene1213 1.4e-16 91.7 Bacteria atpE GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 ko:K02110 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00157 ko00000,ko00001,ko00002,ko00194 3.A.2.1 Bacteria 2ZI0B@2,COG0636@1 NA|NA|NA C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation IIAPBPCI_01005 322159.STER_0516 1.6e-123 448.7 Bacilli atpB GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0005887,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016021,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0031224,GO:0031226,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0042777,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045260,GO:0045263,GO:0045264,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 ko:K02108 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00157 ko00000,ko00001,ko00002,ko00194,ko03110 3.A.2.1 iAPECO1_1312.APECO1_2725,iE2348C_1286.E2348C_4048,iEC042_1314.EC042_4125,iECABU_c1320.ECABU_c42230,iECED1_1282.ECED1_4428,iECIAI39_1322.ECIAI39_4342,iECNA114_1301.ECNA114_3887,iECOK1_1307.ECOK1_4187,iECP_1309.ECP_3937,iECS88_1305.ECS88_4160,iECSF_1327.ECSF_3586,iECUMN_1333.ECUMN_4268,iEcSMS35_1347.EcSMS35_4106,iLF82_1304.LF82_0192,iNRG857_1313.NRG857_18615,iUMN146_1321.UM146_18880,iUMNK88_1353.UMNK88_4550,iUTI89_1310.UTI89_C4293,ic_1306.c4666 Bacteria 1TQIT@1239,4H9NV@91061,COG0356@1,COG0356@2 NA|NA|NA C it plays a direct role in the translocation of protons across the membrane IIAPBPCI_01006 264199.stu0480 2.3e-76 291.6 Firmicutes atpF ko:K02109 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00157 ko00000,ko00001,ko00002,ko00194 3.A.2.1 iHN637.CLJU_RS01170,iYO844.BSU36850 Bacteria 1V74A@1239,COG0711@1,COG0711@2 NA|NA|NA C ATP synthase F(0) sector subunit b IIAPBPCI_01007 264199.stu0481 1e-85 322.8 Bacilli atpH GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0036442,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045260,GO:0045261,GO:0045262,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0046961,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 ko:K02113 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00157 ko00000,ko00001,ko00002,ko00194 3.A.2.1 iSF_1195.SF3815,iSFxv_1172.SFxv_4157,iS_1188.S3953 Bacteria 1VAG3@1239,4HKW1@91061,COG0712@1,COG0712@2 NA|NA|NA C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation IIAPBPCI_01008 264199.stu0482 2.5e-278 964.1 Bacilli atpA GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030312,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0040007,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045260,GO:0045261,GO:0045262,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 3.6.3.14 ko:K02111 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00157 ko00000,ko00001,ko00002,ko00194,ko01000 3.A.2.1 iIT341.HP1134,iSB619.SA_RS10975,iSbBS512_1146.SbBS512_E4187 Bacteria 1TNZ8@1239,4HAMZ@91061,COG0056@1,COG0056@2 NA|NA|NA C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit IIAPBPCI_01009 264199.stu0483 6.2e-157 560.1 Bacilli atpG GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K02115 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00157 ko00000,ko00001,ko00002,ko00194 3.A.2.1 iLJ478.TM1611,iSB619.SA_RS10970,iYO844.BSU36820 Bacteria 1TPBX@1239,4HB0E@91061,COG0224@1,COG0224@2 NA|NA|NA C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex IIAPBPCI_01010 322159.STER_0521 6.1e-263 912.9 Bacilli atpD 3.6.3.14 ko:K02112 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00157 ko00000,ko00001,ko00002,ko00194,ko01000 3.A.2.1 iSB619.SA_RS10965 Bacteria 1TPGF@1239,4HAT6@91061,COG0055@1,COG0055@2 NA|NA|NA C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits IIAPBPCI_01011 264199.stu0485 2e-52 211.8 Bacilli atpC GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045260,GO:0045261,GO:0045262,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 ko:K02114 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00157 ko00000,ko00001,ko00002,ko00194 3.A.2.1 iJN746.PP_5412,iSbBS512_1146.SbBS512_E4190 Bacteria 1VA89@1239,4HKHS@91061,COG0355@1,COG0355@2 NA|NA|NA C Produces ATP from ADP in the presence of a proton gradient across the membrane IIAPBPCI_01012 264199.stu0486 7.5e-228 796.2 Bacilli ftsW ko:K03588 ko04112,map04112 ko00000,ko00001,ko02000,ko03036 2.A.103.1 Bacteria 1TPT7@1239,4HAEV@91061,COG0772@1,COG0772@2 NA|NA|NA D Belongs to the SEDS family IIAPBPCI_01013 264199.stu0487 3.6e-224 783.9 Bacilli tuf GO:0001817,GO:0001819,GO:0002791,GO:0002793,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0008150,GO:0009274,GO:0009275,GO:0009986,GO:0010339,GO:0016020,GO:0022610,GO:0030312,GO:0032677,GO:0032757,GO:0032879,GO:0032880,GO:0035821,GO:0044003,GO:0044068,GO:0044403,GO:0044406,GO:0044419,GO:0044424,GO:0044426,GO:0044462,GO:0044464,GO:0044650,GO:0044651,GO:0048518,GO:0048522,GO:0050707,GO:0050708,GO:0050714,GO:0050715,GO:0050789,GO:0050794,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051222,GO:0051223,GO:0051239,GO:0051240,GO:0051701,GO:0051704,GO:0051817,GO:0065007,GO:0070201,GO:0071944,GO:0090087,GO:1903530,GO:1903532,GO:1904951,GO:2000482,GO:2000484 ko:K02358,ko:K15771 ko02010,map02010 M00491 ko00000,ko00001,ko00002,ko02000,ko03012,ko03029,ko04147 3.A.1.1.16,3.A.1.1.2 Bacteria 1TPKC@1239,4HAEH@91061,COG0050@1,COG0050@2 NA|NA|NA J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis IIAPBPCI_01014 264199.stu0488 3.4e-135 487.6 Bacilli tpiA GO:0003674,GO:0003824,GO:0004807,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006066,GO:0006071,GO:0006081,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019400,GO:0019405,GO:0019438,GO:0019439,GO:0019563,GO:0019637,GO:0019682,GO:0019693,GO:0019751,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044275,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046164,GO:0046166,GO:0046174,GO:0046184,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901615,GO:1901616 2.7.2.3,5.3.1.1 ko:K00927,ko:K01803 ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230 M00001,M00002,M00003,M00165,M00166,M00308,M00552 R01015,R01512 RC00002,RC00043,RC00423 ko00000,ko00001,ko00002,ko01000,ko04147 iHN637.CLJU_RS19265 Bacteria 1TP2F@1239,4HAPT@91061,COG0149@1,COG0149@2 NA|NA|NA G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) IIAPBPCI_01015 264199.stu0489 1.7e-111 408.7 Bacilli tmk GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.9 ko:K00943 ko00240,ko01100,map00240,map01100 M00053 R02094,R02098 RC00002 ko00000,ko00001,ko00002,ko01000 iSB619.SA_RS02535 Bacteria 1V1HE@1239,4HGWR@91061,COG0125@1,COG0125@2 NA|NA|NA F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis IIAPBPCI_01016 904306.HMPREF9192_0406 1.1e-156 559.3 Bacilli holB 2.7.7.7 ko:K02341 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Bacteria 1TRVS@1239,4HA3T@91061,COG0470@1,COG0470@2 NA|NA|NA L dna polymerase iii IIAPBPCI_01017 904306.HMPREF9192_0407 8e-135 486.5 Bacilli yaaT GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 Bacteria 1TP1V@1239,4H9M9@91061,COG1774@1,COG1774@2 NA|NA|NA S stage 0 sporulation protein IIAPBPCI_01018 264199.stu0492 9.5e-55 219.2 Bacilli yabA GO:0003674,GO:0005488,GO:0005515,GO:0042802 Bacteria 1VA1F@1239,4HKND@91061,COG4467@1,COG4467@2 NA|NA|NA L Involved in initiation control of chromosome replication IIAPBPCI_01019 264199.stu0493 2.7e-160 571.2 Bacilli rsmI GO:0000154,GO:0000451,GO:0000453,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044464,GO:0046483,GO:0070677,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.198 ko:K07056 ko00000,ko01000,ko03009 Bacteria 1TP6U@1239,4HAH8@91061,COG0313@1,COG0313@2 NA|NA|NA H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA IIAPBPCI_01020 322159.STER_0151 3.8e-232 810.4 Firmicutes ko:K07485 ko00000 Bacteria 1TQ93@1239,COG3464@1,COG3464@2 NA|NA|NA L Transposase IIAPBPCI_01021 322159.STER_0531 3.7e-232 810.4 Bacilli amt ko:K03320 ko00000,ko02000 1.A.11 Bacteria 1TQYG@1239,4HBGK@91061,COG0004@1,COG0004@2 NA|NA|NA P Ammonium Transporter IIAPBPCI_01022 322159.STER_0532 1.2e-52 212.2 Firmicutes glnB ko:K04751,ko:K04752 ko02020,map02020 ko00000,ko00001 Bacteria 1V9Z5@1239,COG0347@1,COG0347@2 NA|NA|NA K Belongs to the P(II) protein family IIAPBPCI_01023 264199.stu0496 1.3e-103 382.5 Firmicutes mur1 ko:K02395 ko00000,ko02035 Bacteria 1UYRM@1239,COG1705@1,COG1705@2 NA|NA|NA NU mannosyl-glycoprotein IIAPBPCI_01024 322159.STER_0534 5.8e-149 533.5 Bacilli XK27_04800 Bacteria 1VAFW@1239,4HIFQ@91061,COG0561@1,COG0561@2 NA|NA|NA S Sucrose-6F-phosphate phosphohydrolase IIAPBPCI_01025 1046629.Ssal_01661 1.2e-92 345.9 Bacilli nptA ko:K03324 ko00000,ko02000 2.A.58.2 Bacteria 1TP4K@1239,4HAZ0@91061,COG1283@1,COG1283@2 NA|NA|NA P COG1283 Na phosphate symporter IIAPBPCI_01026 322159.STER_0537 8e-221 772.7 Bacilli nagA 3.5.1.25 ko:K01443 ko00520,ko01130,map00520,map01130 R02059 RC00166,RC00300 ko00000,ko00001,ko01000 Bacteria 1TPFK@1239,4HC6C@91061,COG1820@1,COG1820@2 NA|NA|NA G Belongs to the metallo-dependent hydrolases superfamily. NagA family IIAPBPCI_01027 264199.stu0502 4.9e-51 206.8 Bacteria Bacteria COG3949@1,COG3949@2 NA|NA|NA IIAPBPCI_01028 264199.stu0503 2.2e-25 120.9 Bacteria Bacteria COG3949@1,COG3949@2 NA|NA|NA IIAPBPCI_01029 264199.stu0504 3.9e-60 237.3 Bacteria Bacteria COG3949@1,COG3949@2 NA|NA|NA IIAPBPCI_01030 904306.HMPREF9192_0417 6.1e-63 246.9 Bacilli Bacteria 1U601@1239,4HBYW@91061,COG3949@1,COG3949@2 NA|NA|NA S membrane IIAPBPCI_01031 264199.stu0505 4.8e-176 623.6 Bacilli glyQ GO:0003674,GO:0003824,GO:0004812,GO:0004820,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016874,GO:0016875,GO:0044424,GO:0044444,GO:0044464,GO:0046983,GO:0140098,GO:0140101 6.1.1.14 ko:K01878,ko:K14164 ko00970,map00970 M00360 R03654 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 iAF1260.b3560,iAF987.Gmet_2942,iJO1366.b3560,iPC815.YPO4072,iY75_1357.Y75_RS19360 Bacteria 1TPW8@1239,4HBCF@91061,COG0752@1,COG0752@2 NA|NA|NA J glycyl-tRNA synthetase alpha subunit IIAPBPCI_01032 322159.STER_0540 0.0 1283.5 Bacilli glyS GO:0003674,GO:0003824,GO:0004812,GO:0004820,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006426,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046983,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.14 ko:K01879,ko:K14164 ko00970,map00970 M00360 R03654 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 iAPECO1_1312.APECO1_2891,iE2348C_1286.E2348C_3810,iECABU_c1320.ECABU_c40010,iECED1_1282.ECED1_4242,iECH74115_1262.ECH74115_4934,iECNA114_1301.ECNA114_3710,iECOK1_1307.ECOK1_4005,iECP_1309.ECP_3661,iECS88_1305.ECS88_3976,iECSF_1327.ECSF_3393,iECSP_1301.ECSP_4554,iECs_1301.ECs4442,iG2583_1286.G2583_4300,iJN678.glyS,iUMN146_1321.UM146_17960,iUTI89_1310.UTI89_C4099,ic_1306.c4378 Bacteria 1TNZ7@1239,4H9NT@91061,COG0751@1,COG0751@2 NA|NA|NA J Glycyl-tRNA synthetase beta subunit IIAPBPCI_01033 264199.stu0508 4.5e-39 166.8 Bacilli ynzC Bacteria 1VEKJ@1239,4HNIB@91061,COG4224@1,COG4224@2 NA|NA|NA S UPF0291 protein IIAPBPCI_01034 1069533.Sinf_0020 9.7e-23 112.1 Firmicutes Bacteria 1TQ93@1239,COG3464@1,COG3464@2 NA|NA|NA L Transposase IIAPBPCI_01035 1046629.Ssal_01370 7.8e-21 105.5 Firmicutes Bacteria 1TQ93@1239,COG3464@1,COG3464@2 NA|NA|NA L Transposase IIAPBPCI_01036 322159.STER_0151 1.1e-107 396.0 Firmicutes ko:K07485 ko00000 Bacteria 1TQ93@1239,COG3464@1,COG3464@2 NA|NA|NA L Transposase IIAPBPCI_01037 264199.stu0509 6.9e-251 872.8 Bacilli cycA GO:0001761,GO:0001762,GO:0003333,GO:0003674,GO:0005215,GO:0005326,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0006836,GO:0006855,GO:0006865,GO:0008150,GO:0008324,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015175,GO:0015179,GO:0015180,GO:0015187,GO:0015238,GO:0015318,GO:0015711,GO:0015804,GO:0015807,GO:0015808,GO:0015816,GO:0015849,GO:0015893,GO:0016020,GO:0022857,GO:0022858,GO:0022889,GO:0032328,GO:0032329,GO:0034220,GO:0042221,GO:0042493,GO:0042891,GO:0042895,GO:0042940,GO:0042941,GO:0042942,GO:0042943,GO:0042944,GO:0042945,GO:0044464,GO:0046942,GO:0046943,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098655,GO:0098656,GO:1902475,GO:1903825,GO:1905039 ko:K03293,ko:K11737 ko00000,ko02000 2.A.3.1,2.A.3.1.7 iECO111_1330.ECO111_5093,iECO26_1355.ECO26_5376,iEcHS_1320.EcHS_A4458,iSbBS512_1146.SbBS512_E4749,iYL1228.KPN_04601 Bacteria 1TP97@1239,4H9QX@91061,COG1113@1,COG1113@2 NA|NA|NA E permease IIAPBPCI_01038 1215915.BN193_08720 3.2e-09 68.9 Lactococcus uvrX 2.7.7.7 ko:K02346,ko:K03502,ko:K14161 ko00000,ko01000,ko03400 Bacteria 1TP42@1239,1YBFV@1357,4HA1P@91061,COG0389@1,COG0389@2 NA|NA|NA L impB/mucB/samB family IIAPBPCI_01039 1046629.Ssal_01653 7.4e-25 119.0 Bacilli pts33BCA 2.7.1.201,2.7.1.208,2.7.1.211 ko:K02755,ko:K02756,ko:K02757,ko:K02777,ko:K02808,ko:K02809,ko:K02810,ko:K02817,ko:K02818,ko:K02819,ko:K20107,ko:K20108 ko00010,ko00500,ko00520,ko02026,ko02060,ko05111,map00010,map00500,map00520,map02026,map02060,map05111 M00265,M00266,M00268,M00269,M00270,M00271,M00272,M00303,M00806 R00811,R02738,R02780,R04111,R04394,R05132,R08559 RC00017,RC03206 ko00000,ko00001,ko00002,ko01000,ko02000 4.A.1.1.1,4.A.1.1.11,4.A.1.1.12,4.A.1.2.1,4.A.1.2.10,4.A.1.2.11,4.A.1.2.12,4.A.1.2.13,4.A.1.2.2,4.A.1.2.4,4.A.1.2.5,4.A.1.2.6,4.A.1.2.8,4.A.1.2.9 Bacteria 1TP5X@1239,4HA0I@91061,COG1263@1,COG1263@2,COG1264@1,COG1264@2,COG2190@1,COG2190@2 NA|NA|NA G pts system IIAPBPCI_01040 904306.HMPREF9192_0423 1.3e-181 642.5 Bacilli pts33BCA ko:K02755,ko:K02756,ko:K02757 ko02060,map02060 M00271 ko00000,ko00001,ko00002,ko01000,ko02000 4.A.1.2.11,4.A.1.2.2,4.A.1.2.5,4.A.1.2.6 Bacteria 1TP5X@1239,4HA0I@91061,COG1263@1,COG1263@2,COG1264@1,COG1264@2,COG2190@1,COG2190@2 NA|NA|NA G pts system IIAPBPCI_01041 322159.STER_0545 4.1e-141 507.3 Bacteria ppiA 5.2.1.8 ko:K01802,ko:K03767,ko:K03768 ko01503,ko04217,map01503,map04217 ko00000,ko00001,ko01000,ko03110,ko04147 Bacteria COG0652@1,COG0652@2 NA|NA|NA O PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides IIAPBPCI_01046 904306.HMPREF9192_0429 1.5e-166 592.0 Bacilli fhuR Bacteria 1V53I@1239,4HIEU@91061,COG0583@1,COG0583@2 NA|NA|NA K transcriptional regulator (lysR family) IIAPBPCI_01047 264199.stu0521 2.6e-77 294.7 Bacilli lspA 3.4.23.36 ko:K03101 ko03060,map03060 ko00000,ko00001,ko01000,ko01002 Bacteria 1VA9R@1239,4HIR4@91061,COG0597@1,COG0597@2 NA|NA|NA MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins IIAPBPCI_01048 264199.stu0522 5.5e-161 573.5 Bacilli rluD GO:0000027,GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022607,GO:0022613,GO:0022618,GO:0031118,GO:0034470,GO:0034622,GO:0034641,GO:0034660,GO:0042254,GO:0042255,GO:0042273,GO:0043170,GO:0043412,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:1901360 5.4.99.23 ko:K06180 ko00000,ko01000,ko03009 iE2348C_1286.E2348C_2868,iECED1_1282.ECED1_3035,iECSF_1327.ECSF_2432 Bacteria 1TPCM@1239,4HBG2@91061,COG0564@1,COG0564@2 NA|NA|NA J Responsible for synthesis of pseudouridine from uracil IIAPBPCI_01049 264199.stu0523 1.1e-87 329.3 Bacilli pyrR 2.4.2.9 ko:K02825 ko00240,ko01100,map00240,map01100 R00966 RC00063 ko00000,ko00001,ko01000,ko03000 Bacteria 1V3GV@1239,4HGYE@91061,COG2065@1,COG2065@2 NA|NA|NA F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant IIAPBPCI_01050 322159.STER_0556 4.9e-227 793.5 Bacilli pyrP ko:K02824 ko00000,ko02000 2.A.40.1.1,2.A.40.1.2 iLJ478.TM0819 Bacteria 1TQKX@1239,4HAEU@91061,COG2233@1,COG2233@2 NA|NA|NA F uracil Permease IIAPBPCI_01051 264199.stu0525 1e-173 615.9 Bacilli pyrB GO:0003674,GO:0003824,GO:0004070,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016020,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0030312,GO:0034641,GO:0034654,GO:0040007,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0071944,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.3.2 ko:K00608,ko:K00609 ko00240,ko00250,ko01100,map00240,map00250,map01100 M00051 R01397 RC00064,RC02850 ko00000,ko00001,ko00002,ko01000 iYO844.BSU15490 Bacteria 1TQ96@1239,4H9M6@91061,COG0540@1,COG0540@2 NA|NA|NA F Belongs to the ATCase OTCase family IIAPBPCI_01052 322159.STER_0558 2.1e-210 738.0 Bacilli carA GO:0000050,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005951,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0019627,GO:0019752,GO:0032991,GO:0034641,GO:0040007,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494 6.3.5.5 ko:K01955,ko:K01956 ko00240,ko00250,ko01100,map00240,map00250,map01100 M00051 R00256,R00575,R01395,R10948,R10949 RC00002,RC00010,RC00043,RC02750,RC02798,RC03314 ko00000,ko00001,ko00002,ko01000 iNJ661.Rv1383,iYO844.BSU15510 Bacteria 1TQ8N@1239,4H9Z0@91061,COG0505@1,COG0505@2 NA|NA|NA F carbamoyl-phosphate synthetase glutamine chain IIAPBPCI_01053 264199.stu0527 0.0 2065.0 Bacilli carB GO:0000050,GO:0003674,GO:0003824,GO:0004087,GO:0004088,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016884,GO:0019627,GO:0019752,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.5.5 ko:K01955 ko00240,ko00250,ko01100,map00240,map00250,map01100 M00051 R00256,R00575,R01395,R10948,R10949 RC00002,RC00010,RC00043,RC02750,RC02798,RC03314 ko00000,ko00001,ko00002,ko01000 Bacteria 1TPID@1239,4HAEY@91061,COG0458@1,COG0458@2 NA|NA|NA F carbamoyl-phosphate synthetase ammonia chain IIAPBPCI_01054 322159.STER_0561 2.1e-129 468.4 Bacilli 2.1.1.223 ko:K15460 ko00000,ko01000,ko03016 Bacteria 1UJ4P@1239,4IT17@91061,COG4123@1,COG4123@2 NA|NA|NA S Putative SAM-dependent methyltransferase IIAPBPCI_01055 264199.stu0532 3.6e-35 153.7 Bacteria Bacteria COG0577@1,COG0577@2 NA|NA|NA V efflux transmembrane transporter activity IIAPBPCI_01056 264199.stu0533 3.1e-31 141.0 Bacteria ko:K02004 M00258 ko00000,ko00002,ko02000 3.A.1 Bacteria COG0577@1,COG0577@2 NA|NA|NA V efflux transmembrane transporter activity IIAPBPCI_01057 264199.stu0535 8.2e-28 129.0 Bacteria ytrF ko:K02004,ko:K16918 ko02010,map02010 M00258,M00584 ko00000,ko00001,ko00002,ko02000 3.A.1 Bacteria COG0577@1,COG0577@2 NA|NA|NA V efflux transmembrane transporter activity IIAPBPCI_01058 435842.HMPREF0848_00164 8.2e-77 293.1 Bacilli rplJ GO:0003674,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006417,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015934,GO:0016020,GO:0017148,GO:0019222,GO:0019538,GO:0022625,GO:0022626,GO:0030312,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0034641,GO:0034645,GO:0040007,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044877,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0071704,GO:0071944,GO:0080090,GO:1901564,GO:1901566,GO:1901576,GO:1990904,GO:2000112,GO:2000113 ko:K02864,ko:K02935 ko03010,map03010 M00178,M00179 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1V3JJ@1239,4HH0N@91061,COG0244@1,COG0244@2 NA|NA|NA J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors IIAPBPCI_01059 322159.STER_0568 3e-52 211.1 Bacilli rplL ko:K02935 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1V6EI@1239,4HIGQ@91061,COG0222@1,COG0222@2 NA|NA|NA J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation IIAPBPCI_01060 759913.SDSE_1325 2.1e-19 100.9 Streptococcus dysgalactiae group Bacteria 1MA5I@119603,1TXF4@1239,2BMA2@1,32FTX@2,4I6DG@91061 NA|NA|NA IIAPBPCI_01061 759913.SDSE_1324 4.5e-133 480.7 Streptococcus dysgalactiae group repA Bacteria 1M9YD@119603,1VHQA@1239,2DP1C@1,3304N@2,4HPY6@91061 NA|NA|NA S Replication initiator protein A (RepA) N-terminus IIAPBPCI_01062 663952.SDD27957_04290 4.8e-10 68.9 Streptococcus dysgalactiae group Bacteria 1MA66@119603,1TXFK@1239,2DJ8F@1,304Z3@2,4I6DZ@91061 NA|NA|NA IIAPBPCI_01063 1123304.AQYA01000037_gene298 7.9e-260 902.5 Bacilli hpaIIM 2.1.1.37 ko:K00558 ko00270,ko01100,ko05206,map00270,map01100,map05206 M00035 R04858 RC00003,RC00332 ko00000,ko00001,ko00002,ko01000,ko02048,ko03032,ko03036 Bacteria 1TPNE@1239,4HB9C@91061,COG0270@1,COG0270@2 NA|NA|NA H cytosine-specific methyltransferase IIAPBPCI_01064 883168.HMPREF9318_00463 1.6e-73 282.0 Firmicutes XK27_00590 Bacteria 1W4PT@1239,2EV5A@1,33NK4@2 NA|NA|NA IIAPBPCI_01065 1403946.Q615_SPAC00123G0036 1.9e-49 201.8 Streptococcus anginosus group Bacteria 1TW0J@1239,2DIU1@1,3044F@2,42EHG@671232,4I4P9@91061 NA|NA|NA IIAPBPCI_01066 663952.SDD27957_04310 3.8e-37 160.2 Streptococcus dysgalactiae group Bacteria 1MA3U@119603,1TXEG@1239,2DJ81@1,304Y6@2,4I6CS@91061 NA|NA|NA IIAPBPCI_01067 1123304.AQYA01000037_gene301 3.9e-91 340.9 Bacteria 3.4.11.19 ko:K01266,ko:K07052 ko00000,ko01000,ko01002 Bacteria COG1266@1,COG1266@2 NA|NA|NA V CAAX protease self-immunity IIAPBPCI_01068 663952.SDD27957_08365 1.1e-41 175.6 Streptococcus dysgalactiae group Bacteria 1MA0F@119603,1U9FT@1239,29R8I@1,30C9Y@2,4IJJE@91061 NA|NA|NA IIAPBPCI_01069 1116231.SMA_1424 0.0 1212.2 Bacilli traG ko:K03205 ko03070,map03070 M00333 ko00000,ko00001,ko00002,ko02044 3.A.7 Bacteria 1UAJF@1239,4IPX4@91061,COG3505@1,COG3505@2 NA|NA|NA U COG3505 Type IV secretory pathway, VirD4 components IIAPBPCI_01070 1116231.SMA_1423 3.2e-34 150.6 Bacilli XK27_00560 Bacteria 1W4XR@1239,295KB@1,2ZSXU@2,4I17I@91061 NA|NA|NA IIAPBPCI_01071 1123304.AQYA01000037_gene305 3.3e-139 501.1 Bacilli XK27_00555 Bacteria 1VY42@1239,2EFFF@1,33986@2,4HMPN@91061 NA|NA|NA IIAPBPCI_01072 996306.SSUR61_1148 4.4e-53 213.8 Streptococcus suis XK27_00550 Bacteria 1U92M@1239,1WTK7@1307,2AMBF@1,31C6I@2,4IJ34@91061 NA|NA|NA S PrgI family protein IIAPBPCI_01073 873448.STRPO_2031 0.0 1500.0 Bacilli Bacteria 1TPDR@1239,4HUB9@91061,COG3451@1,COG3451@2 NA|NA|NA U 'COG3451 Type IV secretory pathway, VirB4 components' IIAPBPCI_01074 663952.SDD27957_04360 1.5e-43 182.6 Bacilli Bacteria 1VPFZ@1239,4HFGV@91061,COG3942@1,COG3942@2 NA|NA|NA M CHAP domain protein IIAPBPCI_01075 663952.SDD27957_04360 0.0 1274.6 Bacilli Bacteria 1VPFZ@1239,4HFGV@91061,COG3942@1,COG3942@2 NA|NA|NA M CHAP domain protein IIAPBPCI_01076 1116231.SMA_1418 8.1e-108 396.4 Bacilli abiGI Bacteria 1V3JU@1239,4HMVW@91061,COG5340@1,COG5340@2 NA|NA|NA K Transcriptional regulator, AbiEi antitoxin IIAPBPCI_01077 1123304.AQYA01000037_gene310 3e-90 337.8 Bacilli Bacteria 1TSFX@1239,4HGAF@91061,COG2253@1,COG2253@2 NA|NA|NA S Nucleotidyl transferase AbiEii toxin, Type IV TA system IIAPBPCI_01078 1116231.SMA_1416 1.6e-34 151.4 Bacilli Bacteria 1VDTP@1239,2E2ST@1,32XV1@2,4HYGP@91061 NA|NA|NA IIAPBPCI_01079 904306.HMPREF9192_1424 1.1e-54 219.2 Bacilli Bacteria 1W52Y@1239,2BWBR@1,2ZDFR@2,4I0XT@91061 NA|NA|NA IIAPBPCI_01080 246201.SM12261_0096 2.6e-56 224.6 Streptococcus mitis Bacteria 1U4EX@1239,2DKBU@1,2TPSS@28037,3094K@2,4IE7E@91061 NA|NA|NA S Bacterial mobilisation protein (MobC) IIAPBPCI_01081 904306.HMPREF9192_1426 7.9e-73 279.6 Bacilli Bacteria 1V2SB@1239,4HFEX@91061,COG3843@1,COG3843@2 NA|NA|NA U relaxase IIAPBPCI_01082 1116231.SMA_1385 2.3e-214 751.5 Bacilli Bacteria 1V2SB@1239,4HFEX@91061,COG3843@1,COG3843@2 NA|NA|NA U relaxase IIAPBPCI_01083 764298.STRMA_1784 6.5e-169 600.5 Bacilli Bacteria 1TS12@1239,4HEKK@91061,COG0642@1,COG2205@2 NA|NA|NA T PhoQ Sensor IIAPBPCI_01084 764298.STRMA_1785 6.8e-93 347.1 Bacilli Bacteria 1TYPK@1239,4HBUE@91061,COG0745@1,COG0745@2 NA|NA|NA T COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain IIAPBPCI_01086 40041.SZO_07670 6.4e-205 720.7 Streptococcus dysgalactiae group ko:K20344 ko02010,ko02024,map02010,map02024 ko00000,ko00001,ko02000 3.A.1.112 Bacteria 1M9ZS@119603,1V77J@1239,4HAX2@91061,COG2274@1,COG2274@2 NA|NA|NA V Lantibiotic transport processing ATP-binding protein IIAPBPCI_01087 764298.STRMA_1786 7.2e-116 423.7 Bacilli bcrA ko:K20459 ko02010,map02010 M00813 ko00000,ko00001,ko00002,ko02000 3.A.1.124.3,3.A.1.124.4,3.A.1.124.5 Bacteria 1TP4J@1239,4HBGH@91061,COG1131@1,COG1131@2 NA|NA|NA V abc transporter atp-binding protein IIAPBPCI_01088 764298.STRMA_1787 9.7e-82 310.1 Bacilli ko:K20460,ko:K20461 ko02010,map02010 M00813 ko00000,ko00001,ko00002,ko02000 3.A.1.124.3,3.A.1.124.4,3.A.1.124.5 Bacteria 1V5VS@1239,4HH7H@91061,COG4200@1,COG4200@2 NA|NA|NA S ABC-2 family transporter protein IIAPBPCI_01089 866775.HMPREF9243_1999 8.8e-72 276.9 Bacilli ko:K20460,ko:K20461 ko02010,map02010 M00813 ko00000,ko00001,ko00002,ko02000 3.A.1.124.3,3.A.1.124.4,3.A.1.124.5 Bacteria 1V3PM@1239,4HHIJ@91061,COG4200@1,COG4200@2 NA|NA|NA S ABC-2 family transporter protein IIAPBPCI_01090 1116231.SMA_1373 6.1e-32 142.9 Bacilli Bacteria 1VK84@1239,4HRBT@91061,COG1396@1,COG1396@2 NA|NA|NA K transcriptional IIAPBPCI_01091 1214166.ALLG01000022_gene225 1.2e-28 132.1 Streptococcus suis Bacteria 1U93V@1239,1WTPP@1307,29R26@1,30C3A@2,4IJ4N@91061 NA|NA|NA S Domain of unknown function (DUF3173) IIAPBPCI_01092 1116231.SMA_1153 8.9e-239 832.4 Bacilli Bacteria 1VRXQ@1239,4HUID@91061,COG0582@1,COG0582@2 NA|NA|NA L Belongs to the 'phage' integrase family IIAPBPCI_01093 1116231.SMA_0720 9.1e-229 799.3 Bacilli Bacteria 1TQ93@1239,4HJK9@91061,COG3464@1,COG3464@2 NA|NA|NA L Transposase IIAPBPCI_01094 1410626.JHXB01000031_gene1709 1.6e-18 98.2 unclassified Lachnospiraceae Bacteria 1TRUP@1239,24AJD@186801,27KEC@186928,COG2801@1,COG2801@2 NA|NA|NA L Integrase core domain IIAPBPCI_01095 322159.STER_1348 1.3e-117 429.1 Bacilli devA 3.6.3.25 ko:K02003,ko:K06020,ko:K09810 ko02010,map02010 M00255,M00258 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1,3.A.1.125 Bacteria 1TQP5@1239,4HBXK@91061,COG1136@1,COG1136@2 NA|NA|NA V abc transporter atp-binding protein IIAPBPCI_01096 322159.STER_1347 2.8e-164 584.7 Bacilli hrtB ko:K02004 M00258 ko00000,ko00002,ko02000 3.A.1 Bacteria 1VRMK@1239,4HTA7@91061,COG0577@1,COG0577@2 NA|NA|NA V MacB-like periplasmic core domain IIAPBPCI_01099 322159.STER_0574 3e-92 345.1 Bacteria Bacteria 2DVN5@1,33WG3@2 NA|NA|NA S MucBP domain IIAPBPCI_01100 904306.HMPREF9192_0446 6.5e-50 203.4 Bacilli ko:K14194,ko:K14195 ko05150,map05150 ko00000,ko00001 Bacteria 1UYRE@1239,4ISZF@91061,COG2373@1,COG2373@2,COG4932@1,COG4932@2 NA|NA|NA M YSIRK type signal peptide IIAPBPCI_01101 322159.STER_0576 0.0 1226.5 Firmicutes Bacteria 1V15F@1239,COG3266@1,COG3266@2 NA|NA|NA M the current gene model (or a revised gene model) may contain a IIAPBPCI_01103 322159.STER_0578 0.0 1098.6 Bacilli mdlB ko:K06147,ko:K06148,ko:K18887 ko02010,map02010 M00706 ko00000,ko00001,ko00002,ko02000 3.A.1,3.A.1.106,3.A.1.109,3.A.1.21 Bacteria 1TP0B@1239,4H9SC@91061,COG1132@1,COG1132@2 NA|NA|NA V abc transporter atp-binding protein IIAPBPCI_01104 322159.STER_0579 0.0 1138.3 Bacilli lmrA ko:K06147,ko:K18888 ko02010,map02010 M00706 ko00000,ko00001,ko00002,ko02000 3.A.1,3.A.1.106,3.A.1.109,3.A.1.21 Bacteria 1TP0B@1239,4HA3S@91061,COG1132@1,COG1132@2 NA|NA|NA V abc transporter atp-binding protein IIAPBPCI_01105 322159.STER_0580 4.6e-199 700.3 Bacilli queA GO:0002097,GO:0002099,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016853,GO:0018130,GO:0019438,GO:0034404,GO:0034470,GO:0034641,GO:0034654,GO:0034660,GO:0042455,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0051075,GO:0055086,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.99.17 ko:K07568 ko00000,ko01000,ko03016 Bacteria 1TPKD@1239,4H9PT@91061,COG0809@1,COG0809@2 NA|NA|NA J Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) IIAPBPCI_01106 1046629.Ssal_01624 3.4e-121 441.0 Bacilli nagB GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006040,GO:0008150,GO:0008152,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:1901135 3.1.1.31,3.5.99.6 ko:K01057,ko:K02564 ko00030,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00520,map01100,map01110,map01120,map01130,map01200 M00004,M00006,M00008 R00765,R02035 RC00163,RC00537 ko00000,ko00001,ko00002,ko01000 Bacteria 1TP10@1239,4HAG4@91061,COG0363@1,COG0363@2 NA|NA|NA G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion IIAPBPCI_01107 322159.STER_0582 1.3e-214 752.3 Bacilli 2.7.13.3 ko:K07706 ko02020,ko02024,map02020,map02024 M00495 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Bacteria 1UDI2@1239,4HF65@91061,COG3290@1,COG3290@2 NA|NA|NA T signal transduction protein with a C-terminal ATPase domain IIAPBPCI_01108 322159.STER_0583 2.1e-131 474.9 Bacilli rr02 Bacteria 1TXDF@1239,4HDA7@91061,COG3279@1,COG3279@2 NA|NA|NA KT response regulator IIAPBPCI_01109 264199.stu0545 6.3e-27 125.9 Bacilli 2.7.7.73,2.7.7.80 ko:K03148,ko:K21029 ko00730,ko01100,ko04122,map00730,map01100,map04122 R07459 RC00043 ko00000,ko00001,ko01000 Bacteria 1TQ3U@1239,4HBGP@91061,COG0476@1,COG0476@2 NA|NA|NA H Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 IIAPBPCI_01110 264199.stu0545 1.1e-178 632.5 Bacilli 2.7.7.73,2.7.7.80 ko:K03148,ko:K21029 ko00730,ko01100,ko04122,map00730,map01100,map04122 R07459 RC00043 ko00000,ko00001,ko01000 Bacteria 1TQ3U@1239,4HBGP@91061,COG0476@1,COG0476@2 NA|NA|NA H Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 IIAPBPCI_01111 322159.STER_0586 4.8e-168 597.0 Bacilli ko:K01990,ko:K01992 M00254 ko00000,ko00002,ko02000 3.A.1 Bacteria 1UZK5@1239,4HB2Q@91061,COG1131@1,COG1131@2 NA|NA|NA V ABC transporter IIAPBPCI_01112 264199.stu0547 5.4e-122 443.7 Bacilli sagI ko:K01992 M00254 ko00000,ko00002,ko02000 3.A.1 Bacteria 1USMY@1239,4HC3J@91061,COG1511@1,COG1511@2 NA|NA|NA S ABC-2 type transporter IIAPBPCI_01113 1046629.Ssal_01622 3.4e-196 690.6 Bacilli yceA ko:K07146 ko00000 Bacteria 1TRG7@1239,4HA0J@91061,COG1054@1,COG1054@2 NA|NA|NA S Belongs to the UPF0176 family IIAPBPCI_01114 264199.stu0549 1.2e-26 125.2 Bacilli XK27_00085 ko:K07729 ko00000,ko03000 Bacteria 1VERT@1239,4HNID@91061,COG1476@1,COG1476@2 NA|NA|NA K Transcriptional IIAPBPCI_01115 1035184.HMPREF1042_1749 2.9e-17 95.1 Streptococcus anginosus group Bacteria 1TVS7@1239,29ZMX@1,30MNF@2,42DTT@671232,4I418@91061 NA|NA|NA IIAPBPCI_01116 322159.STER_0591 5e-142 510.4 Bacilli deoD_1 2.4.2.3 ko:K00757 ko00240,ko00983,ko01100,map00240,map00983,map01100 R01876,R02484,R08229 RC00063 ko00000,ko00001,ko01000 Bacteria 1V6T2@1239,4HCSE@91061,COG2820@1,COG2820@2 NA|NA|NA F Phosphorylase superfamily IIAPBPCI_01117 322159.STER_0592 5.6e-113 413.7 Bacilli Bacteria 1V6KW@1239,4IPIC@91061,COG1814@1,COG1814@2 NA|NA|NA S VIT family IIAPBPCI_01118 322159.STER_0593 8.8e-133 479.6 Bacilli rsuA 5.4.99.19,5.4.99.22 ko:K06178,ko:K06183 ko00000,ko01000,ko03009 Bacteria 1TQZ2@1239,4H9VU@91061,COG1187@1,COG1187@2 NA|NA|NA J Belongs to the pseudouridine synthase RsuA family IIAPBPCI_01119 322159.STER_0594 5.7e-219 766.5 Bacilli hipO 3.5.1.47 ko:K01436,ko:K05823,ko:K21613 ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230 M00525 R02733 RC00064,RC00300 ko00000,ko00001,ko00002,ko01000,ko01002 Bacteria 1TPD7@1239,4H9WQ@91061,COG1473@1,COG1473@2 NA|NA|NA E COG1473 Metal-dependent amidase aminoacylase carboxypeptidase IIAPBPCI_01120 264199.stu0555 3.4e-17 93.2 Bacteria ald GO:0000286,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006522,GO:0006524,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009078,GO:0009080,GO:0009653,GO:0009987,GO:0016054,GO:0016491,GO:0016638,GO:0019752,GO:0030154,GO:0030435,GO:0032502,GO:0043436,GO:0043934,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0048646,GO:0048856,GO:0048869,GO:0055114,GO:0071704,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 1.4.1.1 ko:K00259 ko00250,ko00430,ko01100,map00250,map00430,map01100 R00396 RC00008 ko00000,ko00001,ko01000 iAF987.Gmet_1099 Bacteria COG0686@1,COG0686@2 NA|NA|NA E alanine dehydrogenase activity IIAPBPCI_01121 435842.HMPREF0848_00185 9.1e-48 196.1 Bacilli ald GO:0000286,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006522,GO:0006524,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009078,GO:0009080,GO:0009653,GO:0009987,GO:0016054,GO:0016491,GO:0016638,GO:0019752,GO:0030154,GO:0030435,GO:0032502,GO:0043436,GO:0043934,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0048646,GO:0048856,GO:0048869,GO:0055114,GO:0071704,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 1.4.1.1 ko:K00259 ko00250,ko00430,ko01100,map00250,map00430,map01100 R00396 RC00008 ko00000,ko00001,ko01000 iAF987.Gmet_1099 Bacteria 1TNZ5@1239,4HABX@91061,COG0686@1,COG0686@2 NA|NA|NA C Belongs to the AlaDH PNT family IIAPBPCI_01122 264199.stu0557 1.3e-246 858.6 Bacilli merA GO:0000302,GO:0000305,GO:0001101,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0010035,GO:0016491,GO:0016667,GO:0019725,GO:0042221,GO:0042592,GO:0044424,GO:0044464,GO:0045454,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1901530,GO:1901700,GO:1990748 1.16.1.1 ko:K00520,ko:K21739 ko00000,ko01000 Bacteria 1TP1W@1239,4HBZF@91061,COG1249@1,COG1249@2 NA|NA|NA C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family IIAPBPCI_01123 264199.stu0558 8.8e-104 382.9 Bacilli GBS0088 ko:K09962 ko00000 Bacteria 1V1YD@1239,4HGK6@91061,COG3575@1,COG3575@2 NA|NA|NA J protein conserved in bacteria IIAPBPCI_01124 264199.stu0559 4.6e-136 490.7 Bacilli mvk 1.1.1.88,2.3.3.10,2.7.1.36 ko:K00054,ko:K00869,ko:K01641 ko00072,ko00280,ko00650,ko00900,ko01100,ko01110,ko01130,ko04146,map00072,map00280,map00650,map00900,map01100,map01110,map01130,map04146 M00088,M00095 R01978,R02081,R02245 RC00002,RC00004,RC00017,RC00503,RC00644 ko00000,ko00001,ko00002,ko01000 Bacteria 1TPVW@1239,4IRCB@91061,COG1577@1,COG1577@2 NA|NA|NA I mevalonate kinase IIAPBPCI_01125 264199.stu0560 1.1e-170 605.9 Bacilli mvaD 4.1.1.33 ko:K01597 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 M00095 R01121 RC00453 ko00000,ko00001,ko00002,ko01000 Bacteria 1TQXR@1239,4HAM6@91061,COG3407@1,COG3407@2 NA|NA|NA I diphosphomevalonate decarboxylase IIAPBPCI_01126 322159.STER_0600 3.1e-176 624.4 Bacilli mvaK2 2.7.1.36,2.7.1.43,2.7.4.2 ko:K00869,ko:K00938,ko:K16190 ko00040,ko00053,ko00520,ko00900,ko01100,ko01110,ko01130,ko04146,map00040,map00053,map00520,map00900,map01100,map01110,map01130,map04146 M00014,M00095 R01476,R02245,R03245 RC00002,RC00017,RC00078 ko00000,ko00001,ko00002,ko01000 Bacteria 1VXNZ@1239,4IRFS@91061,COG1577@1,COG1577@2 NA|NA|NA I GHMP kinases N terminal domain IIAPBPCI_01127 1046629.Ssal_01605 6.2e-185 653.3 Bacilli fni 1.1.1.88,5.3.3.2 ko:K00054,ko:K01823 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 M00095,M00096,M00364,M00365,M00366,M00367 R01123,R02081 RC00004,RC00455,RC00644 ko00000,ko00001,ko00002,ko01000 Bacteria 1TQZ3@1239,4HAMV@91061,COG1304@1,COG1304@2 NA|NA|NA C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP) IIAPBPCI_01128 322159.STER_0603 1.8e-251 874.8 Bacilli glmU GO:0000270,GO:0000271,GO:0000287,GO:0003674,GO:0003824,GO:0003977,GO:0005488,GO:0005975,GO:0005976,GO:0006022,GO:0006023,GO:0006024,GO:0006629,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0009058,GO:0009059,GO:0009103,GO:0009252,GO:0009273,GO:0009987,GO:0016051,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0016772,GO:0016779,GO:0019134,GO:0022610,GO:0030203,GO:0030260,GO:0033692,GO:0034637,GO:0034645,GO:0035635,GO:0040007,GO:0042546,GO:0043167,GO:0043169,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044403,GO:0044406,GO:0044409,GO:0044419,GO:0044650,GO:0046872,GO:0051701,GO:0051704,GO:0051806,GO:0051828,GO:0070569,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1903509 2.3.1.157,2.7.7.23 ko:K04042,ko:K11528 ko00520,ko01100,ko01130,map00520,map01100,map01130 M00362 R00416,R05332 RC00002,RC00004,RC00166 ko00000,ko00001,ko00002,ko01000 Bacteria 1TP88@1239,4H9V5@91061,COG1207@1,COG1207@2 NA|NA|NA M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain IIAPBPCI_01129 322159.STER_0604 1e-96 359.4 Bacilli nudF 3.6.1.13 ko:K01515 ko00230,map00230 R01054 RC00002 ko00000,ko00001,ko01000 iHN637.CLJU_RS05505,iSB619.SA_RS07540,iYO844.BSU23610 Bacteria 1V6F5@1239,4HII9@91061,COG0494@1,COG0494@2 NA|NA|NA L AdP-ribose pyrophosphatase IIAPBPCI_01130 322159.STER_0605 2.5e-21 107.8 Bacteria Bacteria 2DC3Q@1,2ZCSA@2 NA|NA|NA IIAPBPCI_01131 264199.stu0566 2e-118 431.8 Bacilli mtnN 3.2.2.9 ko:K01243 ko00270,ko01100,ko01230,map00270,map01100,map01230 M00034,M00609 R00194,R01401 RC00063,RC00318 ko00000,ko00001,ko00002,ko01000 Bacteria 1U7WK@1239,4HB8K@91061,COG0775@1,COG0775@2 NA|NA|NA E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively IIAPBPCI_01133 1046629.Ssal_01596 3e-29 134.4 Bacteria ko:K02460 ko03070,ko05111,map03070,map05111 M00331 ko00000,ko00001,ko00002,ko02044 3.A.15 Bacteria COG3156@1,COG3156@2,COG4932@1,COG4932@2 NA|NA|NA U protein secretion IIAPBPCI_01134 1046629.Ssal_01596 1.8e-49 202.2 Bacteria ko:K02460 ko03070,ko05111,map03070,map05111 M00331 ko00000,ko00001,ko00002,ko02044 3.A.15 Bacteria COG3156@1,COG3156@2,COG4932@1,COG4932@2 NA|NA|NA U protein secretion IIAPBPCI_01135 435842.HMPREF0848_00198 2.5e-08 65.5 Firmicutes Bacteria 1UXB4@1239,COG4932@1,COG4932@2 NA|NA|NA M Pilin isopeptide linkage domain protein IIAPBPCI_01136 322159.STER_0610 7.6e-191 672.9 Bacilli dgs 2.4.1.208 ko:K13677 ko00561,ko01100,map00561,map01100 R05164 RC00005,RC00049 ko00000,ko00001,ko01000,ko01003 GT4 Bacteria 1TPSS@1239,4HBKA@91061,COG0438@1,COG0438@2 NA|NA|NA M Glycosyltransferase, group 1 family protein IIAPBPCI_01137 264199.stu0570 3.4e-247 860.5 Bacilli mgs GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006629,GO:0006643,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016740,GO:0016757,GO:0016758,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0046467,GO:0046872,GO:0071704,GO:1901576 2.4.1.337 ko:K19002 ko00561,ko01100,map00561,map01100 R10850 RC00005,RC00059 ko00000,ko00001,ko01000,ko01003 GT4 Bacteria 1TPTA@1239,4HA41@91061,COG0438@1,COG0438@2 NA|NA|NA M Glycosyltransferase, group 1 family protein IIAPBPCI_01138 889204.HMPREF9423_1244 3.5e-49 200.7 Bacilli XK27_13030 Bacteria 1VBNS@1239,2DMJF@1,32RYX@2,4HMXU@91061 NA|NA|NA IIAPBPCI_01139 264199.stu0572 0.0 1319.7 Bacilli thrS GO:0003674,GO:0003824,GO:0004812,GO:0004829,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006435,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.3 ko:K01868 ko00970,map00970 M00359,M00360 R03663 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Bacteria 1TP78@1239,4HABZ@91061,COG0441@1,COG0441@2 NA|NA|NA J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) IIAPBPCI_01140 264199.stu0573 7.1e-48 196.4 Bacilli Bacteria 1V202@1239,4HJ0U@91061,COG0596@1,COG0596@2 NA|NA|NA S hydrolases or acyltransferases (alpha beta hydrolase superfamily) IIAPBPCI_01141 264199.stu0573 3.6e-70 270.8 Bacilli Bacteria 1V202@1239,4HJ0U@91061,COG0596@1,COG0596@2 NA|NA|NA S hydrolases or acyltransferases (alpha beta hydrolase superfamily) IIAPBPCI_01142 264199.stu0574 4e-164 583.9 Bacilli Bacteria 1VFZ3@1239,2DQ82@1,3357U@2,4HNXV@91061 NA|NA|NA S Protein of unknown function (DUF3114) IIAPBPCI_01143 904306.HMPREF9192_1302 4.6e-22 109.8 Bacilli Bacteria 1VFZ3@1239,2DQ82@1,3357U@2,4HNXV@91061 NA|NA|NA S Protein of unknown function (DUF3114) IIAPBPCI_01144 322159.STER_0618 1.5e-118 432.2 Bacilli yqfA GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K11068 ko00000,ko02042 Bacteria 1TTA5@1239,4HDYT@91061,COG1272@1,COG1272@2 NA|NA|NA K protein, Hemolysin III IIAPBPCI_01145 904306.HMPREF9192_1305 1e-25 122.1 Firmicutes ko:K11068 ko00000,ko02042 Bacteria 1V7Z4@1239,COG0789@1,COG0789@2 NA|NA|NA K hmm pf08876 IIAPBPCI_01146 322159.STER_0620 2.7e-233 814.3 Bacilli mvaA 1.1.1.34,1.1.1.88,2.3.1.9 ko:K00021,ko:K00054,ko:K00626 ko00071,ko00072,ko00280,ko00310,ko00362,ko00380,ko00620,ko00630,ko00640,ko00650,ko00720,ko00900,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,ko02020,ko04152,ko04976,map00071,map00072,map00280,map00310,map00362,map00380,map00620,map00630,map00640,map00650,map00720,map00900,map01100,map01110,map01120,map01130,map01200,map01212,map02020,map04152,map04976 M00088,M00095,M00373,M00374,M00375 R00238,R01177,R02081,R02082 RC00004,RC00326,RC00644 ko00000,ko00001,ko00002,ko01000,ko04147 Bacteria 1TPNY@1239,4HBQ3@91061,COG1257@1,COG1257@2 NA|NA|NA C Belongs to the HMG-CoA reductase family IIAPBPCI_01147 264199.stu0577 5e-218 763.5 Bacilli mvaS 2.3.3.10 ko:K01641 ko00072,ko00280,ko00650,ko00900,ko01100,ko01110,ko01130,map00072,map00280,map00650,map00900,map01100,map01110,map01130 M00088,M00095 R01978 RC00004,RC00503 ko00000,ko00001,ko00002,ko01000 Bacteria 1TR4K@1239,4HA67@91061,COG3425@1,COG3425@2 NA|NA|NA I synthase IIAPBPCI_01148 322159.STER_0622 1.9e-166 591.7 Bacilli thyA 2.1.1.45 ko:K00560 ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523 M00053 R02101 RC00219,RC00332 ko00000,ko00001,ko00002,ko01000 Bacteria 1TSIR@1239,4HI1C@91061,COG0207@1,COG0207@2 NA|NA|NA F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis IIAPBPCI_01149 322159.STER_0623 1.4e-92 345.5 Bacilli folA 1.5.1.3,1.5.1.47,2.1.1.45,3.5.4.12 ko:K00287,ko:K00560,ko:K01493,ko:K05896,ko:K17364 ko00240,ko00670,ko00790,ko01100,ko01523,map00240,map00670,map00790,map01100,map01523 M00053,M00126,M00429,M00840 R00936,R00937,R00939,R00940,R01663,R02101,R02235,R02236,R03388,R11765 RC00074,RC00109,RC00110,RC00158,RC00219,RC00332,RC01584 ko00000,ko00001,ko00002,ko01000,ko02044,ko03036 Bacteria 1VB80@1239,4HIGJ@91061,COG0262@1,COG0262@2 NA|NA|NA H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis IIAPBPCI_01150 435842.HMPREF0848_00215 9.7e-22 108.6 Bacilli Bacteria 1W5G0@1239,2DFKW@1,2ZS8U@2,4HZFD@91061 NA|NA|NA IIAPBPCI_01151 322159.STER_0625 3.7e-224 783.9 Bacilli clpX GO:0000166,GO:0000502,GO:0002020,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009376,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0019899,GO:0019904,GO:0030163,GO:0030164,GO:0030312,GO:0030554,GO:0031333,GO:0031597,GO:0032271,GO:0032272,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0035639,GO:0036094,GO:0040007,GO:0042623,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0043254,GO:0043335,GO:0044087,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051301,GO:0051704,GO:0065007,GO:0070011,GO:0071704,GO:0071944,GO:0097159,GO:0097367,GO:0097718,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1904949,GO:1905368,GO:1905369 ko:K03544 ko04112,map04112 ko00000,ko00001,ko03110 Bacteria 1TQ00@1239,4H9U4@91061,COG1219@1,COG1219@2 NA|NA|NA O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP IIAPBPCI_01152 264199.stu0582 3e-110 404.4 Bacilli engB GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0017076,GO:0019001,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0097159,GO:0097367,GO:1901265,GO:1901363 ko:K03978 ko00000,ko03036 Bacteria 1TSPW@1239,4HBXZ@91061,COG0218@1,COG0218@2 NA|NA|NA D Necessary for normal cell division and for the maintenance of normal septation IIAPBPCI_01153 264199.stu0583 9.2e-248 862.4 Bacilli mmuP GO:0000096,GO:0000097,GO:0000100,GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0006810,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0015806,GO:0016020,GO:0016053,GO:0019752,GO:0022857,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044464,GO:0046394,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071704,GO:0071705,GO:0071944,GO:0072337,GO:0072348,GO:0072349,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1901682 ko:K02205,ko:K03293,ko:K16235,ko:K16236 ko00000,ko02000 2.A.3.1,2.A.3.1.10 Bacteria 1UHNR@1239,4HUT7@91061,COG0833@1,COG0833@2 NA|NA|NA E amino acid IIAPBPCI_01154 264199.stu0584 3.4e-177 627.5 Bacilli mmuM GO:0003674,GO:0003824,GO:0005488,GO:0006575,GO:0006790,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008168,GO:0008172,GO:0008270,GO:0008757,GO:0008898,GO:0009987,GO:0016740,GO:0016741,GO:0032259,GO:0033477,GO:0033554,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914,GO:0050896,GO:0051716,GO:0071704,GO:1901564 1.5.1.20,2.1.1.10 ko:K00297,ko:K00547 ko00270,ko00670,ko00720,ko01100,ko01110,ko01120,ko01200,ko01523,map00270,map00670,map00720,map01100,map01110,map01120,map01200,map01523 M00377 R00650,R01224,R07168 RC00003,RC00035,RC00081 ko00000,ko00001,ko00002,ko01000 Bacteria 1UHQ5@1239,4HAS6@91061,COG2040@1,COG2040@2 NA|NA|NA H Homocysteine IIAPBPCI_01155 1035184.HMPREF1042_0385 1.4e-29 135.2 Streptococcus anginosus group Bacteria 1VYRT@1239,2BXCI@1,346RD@2,42DR8@671232,4HYPP@91061 NA|NA|NA S Domain of unknown function (DUF1912) IIAPBPCI_01156 759913.SDSE_1678 8.3e-15 86.7 Streptococcus dysgalactiae group Bacteria 1M9TG@119603,1TXCP@1239,2DJ7H@1,304X7@2,4I6AH@91061 NA|NA|NA L Helix-hairpin-helix DNA-binding motif class 1 IIAPBPCI_01157 322159.STER_0632 1.6e-101 375.6 Bacilli plsY GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 2.3.1.15,3.5.1.104 ko:K08591,ko:K22278 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 M00089 R00851,R09380 RC00004,RC00039,RC00041 ko00000,ko00001,ko00002,ko01000,ko01004 Bacteria 1VA3J@1239,4HC55@91061,COG0344@1,COG0344@2 NA|NA|NA I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP IIAPBPCI_01158 322159.STER_0633 0.0 1228.8 Bacilli parE GO:0003674,GO:0003824,GO:0003916,GO:0003918,GO:0005575,GO:0006139,GO:0006259,GO:0006265,GO:0006725,GO:0006807,GO:0006996,GO:0007059,GO:0008094,GO:0008150,GO:0008152,GO:0009295,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016887,GO:0017111,GO:0034335,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0051276,GO:0061505,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360 5.99.1.3 ko:K02470,ko:K02622 ko00000,ko01000,ko02048,ko03032,ko03036,ko03400 Bacteria 1TQCF@1239,4H9UC@91061,COG0187@1,COG0187@2 NA|NA|NA L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule IIAPBPCI_01159 264199.stu0589 0.0 1557.7 Bacilli parC GO:0005575,GO:0005622,GO:0005623,GO:0009330,GO:0032991,GO:0044424,GO:0044464 5.99.1.3 ko:K02469,ko:K02621 ko00000,ko01000,ko02048,ko03032,ko03036,ko03400 Bacteria 1TRE7@1239,4HAQB@91061,COG0188@1,COG0188@2 NA|NA|NA L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule IIAPBPCI_01160 264199.stu0590 3.4e-199 700.7 Bacilli ilvE 2.6.1.42 ko:K00826 ko00270,ko00280,ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00270,map00280,map00290,map00770,map01100,map01110,map01130,map01210,map01230 M00019,M00036,M00119,M00570 R01090,R01214,R02199,R10991 RC00006,RC00036 ko00000,ko00001,ko00002,ko01000,ko01007 Bacteria 1TQQI@1239,4HASX@91061,COG0115@1,COG0115@2 NA|NA|NA E Aminotransferase IIAPBPCI_01161 1035187.HMPREF9959_0525 1.1e-15 89.0 Streptococcus mitis Bacteria 1U4J6@1239,29N96@1,2TPZ6@28037,30971@2,4IEAX@91061 NA|NA|NA S Protein of unknown function (DUF2969) IIAPBPCI_01164 264199.stu0592 1.3e-202 712.2 Bacilli rpsA 1.17.7.4 ko:K02945,ko:K03527 ko00900,ko01100,ko01110,ko01130,ko03010,map00900,map01100,map01110,map01130,map03010 M00096,M00178 R05884,R08210 RC01137,RC01487 br01610,ko00000,ko00001,ko00002,ko01000,ko03011 Bacteria 1TQ9N@1239,4H9PX@91061,COG0539@1,COG0539@2 NA|NA|NA J ribosomal protein S1 IIAPBPCI_01167 904306.HMPREF9192_1327 2.6e-101 374.8 Bacilli Bacteria 1VGN9@1239,2DMIQ@1,32RV1@2,4I0DZ@91061 NA|NA|NA S Domain of Unknown Function with PDB structure (DUF3862) IIAPBPCI_01168 1046629.Ssal_01562 6.1e-70 270.4 Bacteria Bacteria COG0398@1,COG0398@2 NA|NA|NA M Pfam SNARE associated Golgi protein IIAPBPCI_01169 322159.STER_0644 9.8e-233 812.4 Bacilli murN 2.3.2.10,2.3.2.16 ko:K05363,ko:K11693,ko:K12554 ko00550,ko01100,map00550,map01100 R08776,R08779,R08780 RC00055,RC00064,RC00096 ko00000,ko00001,ko01000,ko01011 Bacteria 1V181@1239,4HEVU@91061,COG2348@1,COG2348@2 NA|NA|NA V FemAB family IIAPBPCI_01170 435842.HMPREF0848_00232 3e-51 207.6 Bacilli ko:K22230 ko00562,ko01120,map00562,map01120 R09954 RC00182 ko00000,ko00001,ko01000 Bacteria 1TQSS@1239,4HDXF@91061,COG0673@1,COG0673@2 NA|NA|NA S oxidoreductase IIAPBPCI_01171 435842.HMPREF0848_00232 1.4e-41 175.3 Bacilli ko:K22230 ko00562,ko01120,map00562,map01120 R09954 RC00182 ko00000,ko00001,ko01000 Bacteria 1TQSS@1239,4HDXF@91061,COG0673@1,COG0673@2 NA|NA|NA S oxidoreductase IIAPBPCI_01172 264199.stu0599 1.7e-07 60.5 Bacteria yvaA 1.1.1.371 ko:K16044 ko00562,ko01120,map00562,map01120 R09954 RC00182 ko00000,ko00001,ko01000 Bacteria COG0673@1,COG0673@2 NA|NA|NA S inositol 2-dehydrogenase activity IIAPBPCI_01173 1046629.Ssal_01559 2.4e-47 194.5 Bacilli XK27_09445 Bacteria 1VFRS@1239,2EBZ8@1,335YI@2,4HNUK@91061 NA|NA|NA S Domain of unknown function (DUF1827) IIAPBPCI_01174 322159.STER_0647 5.7e-85 320.1 Bacilli mutT 3.5.4.33,3.6.1.13,3.6.1.55 ko:K01515,ko:K03574,ko:K11991 ko00230,map00230 R01054,R10223 RC00002,RC00477 ko00000,ko00001,ko01000,ko03016,ko03400 Bacteria 1VH6Q@1239,4HQVJ@91061,COG0494@1,COG0494@2 NA|NA|NA L Belongs to the Nudix hydrolase family IIAPBPCI_01175 264199.stu0602 0.0 1313.1 Bacilli clpE GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K03697 ko00000,ko03110 Bacteria 1TPMU@1239,4HA0V@91061,COG0542@1,COG0542@2 NA|NA|NA O Belongs to the ClpA ClpB family IIAPBPCI_01176 264199.stu0603 3.1e-181 641.0 Bacilli argF GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.3 ko:K00611 ko00220,ko01100,ko01110,ko01130,ko01230,map00220,map01100,map01110,map01130,map01230 M00029,M00844 R01398 RC00096 ko00000,ko00001,ko00002,ko01000 Bacteria 1TPF2@1239,4H9X8@91061,COG0078@1,COG0078@2 NA|NA|NA E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline IIAPBPCI_01177 264199.stu0604 1.3e-34 151.8 Bacilli ykuJ Bacteria 1VKD0@1239,4HRGC@91061,COG4703@1,COG4703@2 NA|NA|NA S protein conserved in bacteria IIAPBPCI_01178 264199.stu0605 7.5e-118 429.9 Bacilli WQ51_01820 ko:K02029,ko:K02030,ko:K10040,ko:K17073,ko:K17074 ko02010,map02010 M00228,M00236,M00589 ko00000,ko00001,ko00002,ko02000 3.A.1.3,3.A.1.3.20 Bacteria 1TPM3@1239,4IQKK@91061,COG0765@1,COG0765@2 NA|NA|NA P Binding-protein-dependent transport system inner membrane component IIAPBPCI_01179 264199.stu0606 1.1e-130 472.6 Bacilli glnQ 3.6.3.21 ko:K02028 M00236 ko00000,ko00002,ko01000,ko02000 3.A.1.3 Bacteria 1TNYD@1239,4H9WY@91061,COG1126@1,COG1126@2 NA|NA|NA E abc transporter atp-binding protein IIAPBPCI_01180 264199.stu0607 1.2e-77 295.8 Bacilli feoA ko:K04758 ko00000,ko02000 Bacteria 1VEHC@1239,4HPFS@91061,COG1918@1,COG1918@2 NA|NA|NA P FeoA domain protein IIAPBPCI_01181 264199.stu0608 0.0 1359.7 Bacilli feoB ko:K04759 ko00000,ko02000 9.A.8.1 Bacteria 1TP7E@1239,4HBCS@91061,COG0370@1,COG0370@2 NA|NA|NA P transporter of a GTP-driven Fe(2 ) uptake system IIAPBPCI_01182 663952.SDD27957_07575 1.5e-07 61.2 Streptococcus dysgalactiae group Bacteria 1MA5P@119603,1TXF8@1239,2DJ8A@1,304YV@2,4I6DK@91061 NA|NA|NA IIAPBPCI_01183 264199.stu0609 1.9e-33 147.9 Bacteria yugF GO:0003674,GO:0003824,GO:0016787 Bacteria COG2267@1,COG2267@2 NA|NA|NA I carboxylic ester hydrolase activity IIAPBPCI_01184 1046629.Ssal_01547 1.5e-23 114.8 Bacilli Bacteria 1V37Y@1239,4ITDD@91061,COG2267@1,COG2267@2 NA|NA|NA I Alpha/beta hydrolase family IIAPBPCI_01185 322159.STER_0660 4.6e-157 560.5 Bacilli folD GO:0003674,GO:0003824,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0019238,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114 1.5.1.5,3.5.4.9 ko:K01491 ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200 M00140,M00377 R01220,R01655 RC00202,RC00578 ko00000,ko00001,ko00002,ko01000 Bacteria 1TP1P@1239,4H9Q6@91061,COG0190@1,COG0190@2 NA|NA|NA F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate IIAPBPCI_01186 322159.STER_0661 3.9e-148 530.8 Bacilli nnrD 4.2.1.136,5.1.99.6 ko:K17758,ko:K17759 ko00000,ko01000 Bacteria 1TNZE@1239,4HBZC@91061,COG0063@1,COG0063@2 NA|NA|NA H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration IIAPBPCI_01187 264199.stu0613 0.0 1246.5 Bacilli pbp2b 3.4.16.4 ko:K00687,ko:K05515,ko:K12553,ko:K21465 ko00550,ko01100,ko01501,map00550,map01100,map01501 ko00000,ko00001,ko01000,ko01011 Bacteria 1TQHY@1239,4HAFX@91061,COG0768@1,COG0768@2 NA|NA|NA M penicillin-binding protein IIAPBPCI_01188 264199.stu0614 2.2e-105 388.3 Bacilli recR GO:0000731,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009987,GO:0018130,GO:0019438,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:1901360,GO:1901362,GO:1901576 ko:K06187 ko03440,map03440 ko00000,ko00001,ko03400 Bacteria 1TR87@1239,4HAZR@91061,COG0353@1,COG0353@2 NA|NA|NA L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO IIAPBPCI_01189 264199.stu0615 1.1e-43 182.6 Bacteria licT ko:K02538,ko:K03488 ko00000,ko03000 Bacteria COG3711@1,COG3711@2 NA|NA|NA K transcriptional antiterminator IIAPBPCI_01190 904306.HMPREF9192_1347 1.8e-64 251.9 Bacilli licT ko:K02538,ko:K03488 ko00000,ko03000 Bacteria 1TT5A@1239,4HC5Y@91061,COG3711@1,COG3711@2 NA|NA|NA K antiterminator IIAPBPCI_01191 264199.stu0617 1.3e-87 328.9 Bacilli ybeY GO:0000469,GO:0000478,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0005488,GO:0006139,GO:0006355,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0016072,GO:0016151,GO:0016787,GO:0016788,GO:0016892,GO:0016894,GO:0019219,GO:0019222,GO:0019538,GO:0022613,GO:0030490,GO:0031323,GO:0031326,GO:0031554,GO:0031564,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042274,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043244,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1903506,GO:2000112,GO:2001141 2.6.99.2,3.5.4.5 ko:K01489,ko:K03474,ko:K03595,ko:K07042 ko00240,ko00750,ko00983,ko01100,map00240,map00750,map00983,map01100 M00124 R01878,R02485,R05838,R08221 RC00074,RC00514,RC01476 ko00000,ko00001,ko00002,ko01000,ko03009,ko03029 Bacteria 1V6BU@1239,4HIIE@91061,COG0319@1,COG0319@2 NA|NA|NA S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA IIAPBPCI_01192 264199.stu0618 1.7e-64 251.9 Bacilli dgkA 2.7.1.107,2.7.1.66 ko:K00887,ko:K00901 ko00550,ko00561,ko00564,ko01100,ko01110,ko04070,ko04072,ko05231,map00550,map00561,map00564,map01100,map01110,map04070,map04072,map05231 R02240,R05626 RC00002,RC00017 ko00000,ko00001,ko01000 iAF987.Gmet_2369,iSB619.SA_RS07900 Bacteria 1VEGR@1239,4HNKN@91061,COG0818@1,COG0818@2 NA|NA|NA M Diacylglycerol kinase IIAPBPCI_01193 264199.stu0619 1.3e-165 589.0 Bacilli era GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006275,GO:0008150,GO:0008156,GO:0009889,GO:0009890,GO:0009892,GO:0010556,GO:0010558,GO:0010605,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019003,GO:0019219,GO:0019222,GO:0030174,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032297,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0045934,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051052,GO:0051053,GO:0051171,GO:0051172,GO:0051302,GO:0051781,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:0090329,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:2000104,GO:2000112,GO:2000113 ko:K03595,ko:K06883 ko00000,ko03009,ko03029 Bacteria 1TP3R@1239,4H9WF@91061,COG1159@1,COG1159@2 NA|NA|NA M An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism IIAPBPCI_01194 264199.stu0620 1.2e-154 552.4 Bacilli fpg 3.2.2.23,4.2.99.18 ko:K10563 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Bacteria 1TPM9@1239,4H9Q7@91061,COG0266@1,COG0266@2 NA|NA|NA L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates IIAPBPCI_01195 264199.stu0621 1.3e-105 389.0 Bacilli coaE GO:0003674,GO:0003824,GO:0004140,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.24,3.2.2.23,4.2.99.18 ko:K00859,ko:K08309,ko:K10563 ko00770,ko01100,ko03410,map00770,map01100,map03410 M00120 R00130 RC00002,RC00078 ko00000,ko00001,ko00002,ko01000,ko01011,ko03400 GH23 iIT341.HP0831 Bacteria 1V6FS@1239,4HII3@91061,COG0237@1,COG0237@2 NA|NA|NA H Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A IIAPBPCI_01196 264199.stu0622 9.4e-220 769.2 Bacilli mdtG GO:0006810,GO:0006855,GO:0008150,GO:0015893,GO:0042221,GO:0042493,GO:0050896,GO:0051179,GO:0051234,GO:0055085 ko:K08161 ko00000,ko02000 2.A.1.2.20 Bacteria 1TRDJ@1239,4H9Q9@91061,COG0477@1,COG2814@2 NA|NA|NA EGP Major facilitator Superfamily IIAPBPCI_01197 322159.STER_0673 2.6e-33 147.5 Bacilli secG GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006616,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0022857,GO:0022884,GO:0031522,GO:0032978,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0042886,GO:0042887,GO:0043952,GO:0044464,GO:0045047,GO:0045184,GO:0046907,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061024,GO:0065002,GO:0070727,GO:0070972,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:1904680 ko:K03075 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 ko00000,ko00001,ko00002,ko02044 3.A.5.1,3.A.5.2 Bacteria 1VEQR@1239,4HNKC@91061,COG1314@1,COG1314@2 NA|NA|NA U Preprotein translocase subunit SecG IIAPBPCI_01198 264199.stu0625 0.0 1493.0 Bacilli rnr ko:K12573,ko:K12585 ko03018,map03018 M00391 ko00000,ko00001,ko00002,ko01000,ko03016,ko03019 Bacteria 1TQ1G@1239,4HBBH@91061,COG0557@1,COG0557@2 NA|NA|NA J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs IIAPBPCI_01199 264199.stu0626 1.1e-80 305.8 Bacilli smpB GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0070930,GO:0071704,GO:0097159,GO:1901363,GO:1901564 ko:K03664 ko00000 Bacteria 1V3IJ@1239,4HGZX@91061,COG0691@1,COG0691@2 NA|NA|NA O the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA IIAPBPCI_01200 322159.STER_0676 2.1e-276 957.6 Bacilli ppiB GO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:0140096,GO:1901564 5.2.1.8 ko:K01802,ko:K03767,ko:K03768 ko01503,ko04217,map01503,map04217 ko00000,ko00001,ko01000,ko03110,ko04147 Bacteria 1TRHW@1239,4H9V0@91061,COG0561@1,COG0561@2,COG0652@1,COG0652@2 NA|NA|NA G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides IIAPBPCI_01201 264199.stu0628 1.7e-63 248.4 Bacilli yugI 5.3.1.9 ko:K01810,ko:K02945,ko:K07570,ko:K07571,ko:K19142 ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,ko03010,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200,map03010 M00001,M00004,M00114,M00178 R02739,R02740,R03321 RC00376,RC00563 br01610,ko00000,ko00001,ko00002,ko01000,ko02048,ko03011,ko04147 Bacteria 1VASQ@1239,4HKSW@91061,COG1098@1,COG1098@2 NA|NA|NA J RNA binding protein, contains ribosomal protein S1 domain IIAPBPCI_01202 264199.stu0629 3.5e-210 737.3 Bacilli pepQ 3.4.13.9 ko:K01271 ko00000,ko01000,ko01002 Bacteria 1TQ6R@1239,4HA5I@91061,COG0006@1,COG0006@2 NA|NA|NA E Belongs to the peptidase M24B family IIAPBPCI_01203 322159.STER_0679 9.9e-183 646.0 Bacilli ccpA GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0032991,GO:0032993,GO:0043565,GO:0044212,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1990837,GO:2000112,GO:2000113,GO:2001141 ko:K02529 ko00000,ko03000 Bacteria 1TQ7K@1239,4H9NG@91061,COG1609@1,COG1609@2 NA|NA|NA K Catabolite control protein A IIAPBPCI_01204 904306.HMPREF9192_1362 5.2e-27 126.3 Bacilli yyaQ Bacteria 1V4K7@1239,4HP2K@91061,COG2315@1,COG2315@2 NA|NA|NA S YjbR IIAPBPCI_01205 322159.STER_0681 1.5e-45 188.3 Bacteria yyaQ Bacteria COG2315@1,COG2315@2 NA|NA|NA V Protein conserved in bacteria IIAPBPCI_01206 322159.STER_0682 2.9e-207 727.6 Firmicutes glxK 2.7.1.165 ko:K00865 ko00260,ko00561,ko00630,ko01100,ko01120,ko01130,map00260,map00561,map00630,map01100,map01120,map01130 R08572 RC00002,RC00428 ko00000,ko00001,ko01000 Bacteria 1TPSI@1239,COG1929@1,COG1929@2 NA|NA|NA G Belongs to the glycerate kinase type-1 family IIAPBPCI_01207 264199.stu0634 5.7e-77 293.5 Bacilli yueI Bacteria 1VFCV@1239,4HNNE@91061,COG5506@1,COG5506@2 NA|NA|NA S Protein of unknown function (DUF1694) IIAPBPCI_01208 1046629.Ssal_01521 8.2e-246 855.9 Bacilli eno GO:0003674,GO:0003824,GO:0004634,GO:0005488,GO:0005515,GO:0005518,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0009986,GO:0016829,GO:0016835,GO:0016836,GO:0019899,GO:0030312,GO:0035375,GO:0043236,GO:0044424,GO:0044464,GO:0044877,GO:0050840,GO:0071944 4.2.1.11 ko:K01689 ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066 M00001,M00002,M00003,M00346,M00394 R00658 RC00349 ko00000,ko00001,ko00002,ko01000,ko03019,ko04147 Bacteria 1TP2S@1239,4HAKI@91061,COG0148@1,COG0148@2 NA|NA|NA G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis IIAPBPCI_01209 646413.C5IUL7_9CAUD 2.5e-206 724.5 Siphoviridae GO:0006139,GO:0006259,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0015074,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:1901360 Viruses 4QAQE@10239,4QKN9@10699,4QPDM@28883,4QUYF@35237 NA|NA|NA S Phage integrase family IIAPBPCI_01210 1385385.U6E9C7_9CAUD 1.7e-22 112.5 Siphoviridae Viruses 4QBN1@10239,4QKN7@10699,4QQWW@28883,4QZ19@35237 NA|NA|NA S Host cell surface-exposed lipoprotein IIAPBPCI_01211 1095737.HMPREF1110_1192 2.3e-20 105.1 Bacteria Bacteria COG2856@1,COG2856@2 NA|NA|NA E Zn peptidase IIAPBPCI_01212 64186.O21993_9CAUD 7.5e-53 213.0 Siphoviridae Viruses 4QKM5@10699,4QPCB@28883,4QUPK@35237 NA|NA|NA S sequence-specific DNA binding IIAPBPCI_01213 64186.O21995_9CAUD 2.4e-28 131.0 Siphoviridae Viruses 4QAQV@10239,4QKM5@10699,4QPCB@28883,4QUPK@35237 NA|NA|NA S sequence-specific DNA binding IIAPBPCI_01214 646413.C5IUM1_9CAUD 1.1e-137 496.1 Siphoviridae Viruses 4QAPQ@10239,4QMUB@10699,4QPWV@28883,4QZ6P@35237 NA|NA|NA IIAPBPCI_01215 1140002.I570_01470 1.8e-08 66.2 Enterococcaceae Bacteria 1U0EV@1239,2DJPN@1,306V4@2,4B4ND@81852,4I9SB@91061 NA|NA|NA S ORF6C domain IIAPBPCI_01216 1069533.Sinf_0769 2.3e-25 121.3 Bacilli Bacteria 1VN2K@1239,2ENNN@1,33GA0@2,4HR9I@91061 NA|NA|NA IIAPBPCI_01220 1035184.HMPREF1042_1642 2.1e-85 322.4 Streptococcus anginosus group Bacteria 1TQ65@1239,42EBW@671232,4HMRU@91061,COG3935@1,COG3935@2 NA|NA|NA L N-terminal phage replisome organiser (Phage_rep_org_N) IIAPBPCI_01221 633135.C9WB96_9CAUD 7.3e-133 479.9 Siphoviridae Viruses 4QBU2@10239,4QM65@10699,4QPH3@28883,4QV13@35237 NA|NA|NA S IstB-like ATP binding protein IIAPBPCI_01223 35344.A0A097PBE8_BPT12 1.1e-33 150.2 Podoviridae Viruses 4QBFR@10239,4QNJQ@10744,4QPRX@28883,4QV1E@35237 NA|NA|NA S ERF superfamily IIAPBPCI_01224 1239381.K4JU67_9CAUD 8e-49 201.1 Siphoviridae Viruses 4QB3F@10239,4QM6P@10699,4QPZ0@28883,4QV3C@35237 NA|NA|NA S Protein of unknown function (DUF1351) IIAPBPCI_01225 646413.C5IUI2_9CAUD 6.6e-65 253.4 Siphoviridae Viruses 4QAU9@10239,4QKUJ@10699,4QQV4@28883,4QVR2@35237 NA|NA|NA S Single-strand binding protein family IIAPBPCI_01226 112023.Q9MCM0_9CAUD 3.9e-78 297.4 Siphoviridae Viruses 4QKQC@10699,4QPK3@28883,4QW7S@35237 NA|NA|NA S magnesium ion binding IIAPBPCI_01228 1123309.AQYB01000014_gene918 3.9e-10 70.1 Bacilli Bacteria 1TZGK@1239,2BK0S@1,32EDT@2,4HSJ1@91061 NA|NA|NA IIAPBPCI_01231 1123315.AUIP01000014_gene1938 2.7e-31 142.1 Bacilli Bacteria 1VMJG@1239,2DS9F@1,33F4A@2,4HSZ4@91061 NA|NA|NA S Protein of unknown function (DUF1642) IIAPBPCI_01233 768726.HMPREF9178_1077 2e-30 139.0 Streptococcus mitis Bacteria 1U4MH@1239,2DKDX@1,2TQ21@28037,3098Q@2,4I04V@91061 NA|NA|NA S Protein of unknown function (DUF1642) IIAPBPCI_01234 306323.Q56S64_9CAUD 2.2e-30 138.7 Siphoviridae Viruses 4QAQV@10239,4QKM5@10699,4QPCB@28883,4QUPK@35237 NA|NA|NA S sequence-specific DNA binding IIAPBPCI_01236 1461246.X2KPG8_9VIRU 3.1e-24 118.2 Viruses Viruses 4QAXV@10239 NA|NA|NA S YopX protein IIAPBPCI_01239 173707.Q938L8_9CAUD 1.1e-31 142.9 Siphoviridae Viruses 4QDP9@10239,4QMYB@10699,4QQY8@28883,4QWR2@35237 NA|NA|NA IIAPBPCI_01240 1054460.SPPN_00130 5.5e-24 117.5 Bacteria ko:K07474 ko00000 Bacteria COG3728@1,COG3728@2 NA|NA|NA L DNA packaging IIAPBPCI_01241 73422.L0P509_9CAUD 4.9e-240 836.6 Siphoviridae Viruses 4QMEV@10699 NA|NA|NA S Terminase-like family IIAPBPCI_01242 682370.C9W9H5_9CAUD 5.3e-249 866.7 Siphoviridae GO:0005575,GO:0019012,GO:0019028,GO:0032991,GO:0044423,GO:0046729,GO:0046798 Viruses 4QAR7@10239,4QKQ3@10699,4QPKJ@28883,4QUW5@35237 NA|NA|NA S Phage portal protein, SPP1 Gp6-like IIAPBPCI_01243 1385385.U6E9F1_9CAUD 1.8e-111 409.1 Siphoviridae GO:0005575,GO:0019012,GO:0019028,GO:0044423,GO:0046729 Viruses 4QC5Z@10239,4QKMB@10699,4QPGX@28883,4QUNP@35237 NA|NA|NA S Phage Mu protein F like protein IIAPBPCI_01244 1123315.AUIP01000003_gene242 3.5e-10 72.0 Bacilli Bacteria 1VNT5@1239,2DS40@1,33EEI@2,4HRSQ@91061 NA|NA|NA S Domain of unknown function (DUF4355) IIAPBPCI_01245 1123302.KB904182_gene70 2.4e-14 85.1 Firmicutes Bacteria 1UHM5@1239,2DRYD@1,33DP1@2 NA|NA|NA IIAPBPCI_01246 1385385.U6E9B4_9CAUD 7.6e-178 629.8 Siphoviridae GO:0005575,GO:0019012,GO:0019028,GO:0019030,GO:0039620,GO:0044423 Viruses 4QB9S@10239,4QM6J@10699,4QPW1@28883,4QUXK@35237 NA|NA|NA S Phage major capsid protein E IIAPBPCI_01248 1123302.KB904182_gene68 2.1e-36 158.3 Firmicutes Bacteria 1VN9C@1239,2EKJJ@1,33E9D@2 NA|NA|NA S Phage gp6-like head-tail connector protein IIAPBPCI_01250 682370.C9W9I3_9CAUD 4e-43 180.6 Siphoviridae Viruses 4QB1F@10239,4QKPW@10699,4QPSW@28883,4QUYH@35237 NA|NA|NA S exonuclease activity IIAPBPCI_01251 306323.Q56S92_9CAUD 8.2e-61 239.6 Siphoviridae GO:0005575,GO:0008150,GO:0016032,GO:0019012,GO:0019058,GO:0019068,GO:0044403,GO:0044419,GO:0044423,GO:0051704,GO:0098003,GO:0098004,GO:0098015 Viruses 4QB3I@10239,4QKP4@10699,4QPE3@28883 NA|NA|NA IIAPBPCI_01252 1385385.U6E9D4_9CAUD 3.4e-75 287.7 Siphoviridae Viruses 4QAVQ@10239,4QKPR@10699,4QPGB@28883,4QXUP@35237 NA|NA|NA S Phage major tail protein 2 IIAPBPCI_01253 682370.C9W9I6_9CAUD 5e-57 226.9 Siphoviridae Viruses 4QBPH@10239,4QKQD@10699,4QQHY@28883,4QV0G@35237 NA|NA|NA S Pfam:Phage_TAC_12 IIAPBPCI_01255 1385385.U6E979_9CAUD 2.6e-193 683.3 Siphoviridae GO:0005575,GO:0018995,GO:0019012,GO:0030430,GO:0033643,GO:0033646,GO:0043656,GO:0043657,GO:0044215,GO:0044216,GO:0044217 Viruses 4QAK6@10239,4QKKV@10699,4QPBY@28883,4QUP9@35237 NA|NA|NA S peptidoglycan catabolic process IIAPBPCI_01256 78541.O80180_9CAUD 1.6e-171 609.4 Siphoviridae GO:0005575,GO:0019012,GO:0044423,GO:0098015 Viruses 4QBF8@10239,4QKN2@10699,4QPI9@28883,4QUS7@35237 NA|NA|NA S Phage tail protein IIAPBPCI_01257 306323.Q56S86_9CAUD 0.0 1557.3 Siphoviridae Viruses 4QAK6@10239,4QKKV@10699,4QPBY@28883,4QUP9@35237 NA|NA|NA S peptidoglycan catabolic process IIAPBPCI_01258 112023.Q9MCJ5_9CAUD 4e-308 1063.5 Caudovirales Viruses 4QAK6@10239,4QPBY@28883,4QUP9@35237 NA|NA|NA S N-acetylmuramoyl-L-alanine amidase activity IIAPBPCI_01262 888049.HMPREF8578_0250 2.8e-22 110.9 Bacilli Bacteria 1VGGV@1239,4HPNN@91061,COG5546@1,COG5546@2 NA|NA|NA S COG5546 Small integral membrane protein IIAPBPCI_01263 1069533.Sinf_0802 7.4e-115 420.2 Bacilli Bacteria 1VT9V@1239,4HV77@91061,COG0791@1,COG0791@2 NA|NA|NA M Bacteriophage peptidoglycan hydrolase IIAPBPCI_01269 322159.STER_0685 1.3e-24 118.2 Firmicutes WQ51_00785 Bacteria 1W67C@1239,2FKS5@1,34CCP@2 NA|NA|NA IIAPBPCI_01270 264199.stu0636 0.0 1387.9 Bacilli ltaS GO:0005575,GO:0005576 2.7.8.20 ko:K01138,ko:K19005 ko00561,ko01100,map00561,map01100 R05081,R10849 RC00017 ko00000,ko00001,ko01000 Bacteria 1TRMA@1239,4H9S0@91061,COG1368@1,COG1368@2 NA|NA|NA M Belongs to the LTA synthase family IIAPBPCI_01271 264199.stu0637 2.6e-219 767.7 Bacilli ywbD 2.1.1.191 ko:K06969 ko00000,ko01000,ko03009 Bacteria 1TRAJ@1239,4HAA1@91061,COG1092@1,COG1092@2 NA|NA|NA J Methyltransferase IIAPBPCI_01272 322159.STER_0688 8.6e-122 443.0 Bacilli aroD GO:0000166,GO:0003674,GO:0003824,GO:0003855,GO:0004764,GO:0005488,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0016829,GO:0016835,GO:0016836,GO:0019632,GO:0019752,GO:0032787,GO:0036094,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046417,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0097159,GO:1901265,GO:1901363,GO:1901576,GO:1901615 1.1.1.25,4.2.1.10 ko:K03785,ko:K13832 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00022 R02413,R03084 RC00206,RC00848 ko00000,ko00001,ko00002,ko01000 Bacteria 1VHVX@1239,4IPJP@91061,COG0710@1,COG0710@2 NA|NA|NA E Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis-dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3- dehydroshikimate IIAPBPCI_01273 322159.STER_0689 1.5e-160 572.0 Bacilli aroE GO:0000166,GO:0003674,GO:0003824,GO:0004764,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019632,GO:0019752,GO:0032787,GO:0036094,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0097159,GO:1901265,GO:1901363,GO:1901576,GO:1901615 1.1.1.25 ko:K00014 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00022 R02413 RC00206 ko00000,ko00001,ko00002,ko01000 Bacteria 1TQRY@1239,4HD4R@91061,COG0169@1,COG0169@2 NA|NA|NA E Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) IIAPBPCI_01274 322159.STER_0690 2.9e-201 707.6 Bacilli aroB 2.7.1.71,4.2.3.4 ko:K01735,ko:K13829 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00022 R02412,R03083 RC00002,RC00078,RC00847 ko00000,ko00001,ko00002,ko01000 Bacteria 1TPKZ@1239,4HAKN@91061,COG0337@1,COG0337@2 NA|NA|NA E Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) IIAPBPCI_01275 264199.stu0641 4.5e-219 766.9 Bacilli aroC GO:0000166,GO:0003674,GO:0003824,GO:0004107,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0010181,GO:0016053,GO:0016491,GO:0016651,GO:0016829,GO:0016835,GO:0016838,GO:0019438,GO:0019752,GO:0032553,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 4.2.3.5 ko:K01736 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00022 R01714 RC00586 ko00000,ko00001,ko00002,ko01000 iAF987.Gmet_0976,iNJ661.Rv2540c Bacteria 1TQ40@1239,4HA0H@91061,COG0082@1,COG0082@2 NA|NA|NA E Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system IIAPBPCI_01276 322159.STER_0692 1.4e-206 725.3 Bacilli tyrA GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006520,GO:0006570,GO:0006571,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008977,GO:0009058,GO:0009072,GO:0009073,GO:0009095,GO:0009987,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0019438,GO:0019752,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0070403,GO:0071704,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.3.1.12,1.3.1.43 ko:K00210,ko:K00220,ko:K04517 ko00400,ko00401,ko01100,ko01110,ko01130,ko01230,map00400,map00401,map01100,map01110,map01130,map01230 M00025,M00040 R00732,R01728 RC00125 ko00000,ko00001,ko00002,ko01000 iYO844.BSU22610 Bacteria 1TPXG@1239,4HBI4@91061,COG0287@1,COG0287@2 NA|NA|NA E prephenate dehydrogenase IIAPBPCI_01277 264199.stu0643 3.2e-53 214.2 Bacilli yheA Bacteria 1VASS@1239,4HPJM@91061,COG3679@1,COG3679@2 NA|NA|NA S Belongs to the UPF0342 family IIAPBPCI_01278 264199.stu0644 8.8e-173 612.8 Bacilli ldh 1.1.1.27 ko:K00016 ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922 R00703,R01000,R03104 RC00031,RC00044 ko00000,ko00001,ko01000,ko04147 Bacteria 1UXY2@1239,4HD1S@91061,COG0039@1,COG0039@2 NA|NA|NA C Belongs to the LDH MDH superfamily IIAPBPCI_01279 264199.stu0645 8.3e-235 819.3 Bacilli aroA GO:0003674,GO:0003824,GO:0003866,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046417,GO:0071704,GO:1901576 1.3.1.12,1.3.1.43,2.5.1.19 ko:K00210,ko:K00220,ko:K00800 ko00400,ko00401,ko01100,ko01110,ko01130,ko01230,map00400,map00401,map01100,map01110,map01130,map01230 M00022,M00025,M00040 R00732,R01728,R03460 RC00125,RC00350 ko00000,ko00001,ko00002,ko01000 iLJ478.TM0345 Bacteria 1TPIH@1239,4HBHZ@91061,COG0128@1,COG0128@2 NA|NA|NA E Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate IIAPBPCI_01280 322159.STER_0696 2.5e-86 324.7 Bacilli aroK GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0004765,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017076,GO:0019438,GO:0019632,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0032787,GO:0035639,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0046872,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615 1.1.1.25,2.7.1.71,4.2.1.10,4.2.3.4 ko:K00014,ko:K00891,ko:K03785,ko:K03786,ko:K13829,ko:K15546 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00022 R02412,R02413,R03083,R03084 RC00002,RC00078,RC00206,RC00847,RC00848 ko00000,ko00001,ko00002,ko01000,ko03000 iAPECO1_1312.APECO1_1620,iECOK1_1307.ECOK1_0367,iECS88_1305.ECS88_0383,iUMN146_1321.UM146_15425,iUTI89_1310.UTI89_C0407,iYL1228.KPN_00332 Bacteria 1VA6Z@1239,4HKD6@91061,COG0703@1,COG0703@2 NA|NA|NA F Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate IIAPBPCI_01281 264199.stu0647 2.5e-152 544.7 Bacilli pheA GO:0003674,GO:0003824,GO:0004664,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006558,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009094,GO:0009095,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0017144,GO:0019438,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902221,GO:1902223 4.2.1.51 ko:K04518 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00024 R00691,R01373 RC00360 ko00000,ko00001,ko00002,ko01000 iYO844.BSU27900 Bacteria 1TPDN@1239,4HA96@91061,COG0077@1,COG0077@2 NA|NA|NA E Prephenate dehydratase IIAPBPCI_01282 322159.STER_0698 9e-238 829.3 Bacilli msrR Bacteria 1TSWQ@1239,4HE66@91061,COG1316@1,COG1316@2 NA|NA|NA K Transcriptional regulator IIAPBPCI_01283 1069533.Sinf_0933 1.6e-155 555.4 Bacteria ydiA ko:K03304,ko:K11041 ko05150,map05150 ko00000,ko00001,ko02000,ko02042 2.A.16,2.A.16.1 Bacteria COG1275@1,COG1275@2 NA|NA|NA P C4-dicarboxylate transporter malic acid transport protein IIAPBPCI_01284 322159.STER_0700 1.3e-201 708.8 Bacilli Bacteria 1UYHK@1239,4HCT5@91061,COG1960@1,COG1960@2 NA|NA|NA I acyl-CoA dehydrogenase IIAPBPCI_01285 322159.STER_0701 1.1e-95 355.9 Bacteria mip Bacteria COG2128@1,COG2128@2 NA|NA|NA S hydroperoxide reductase activity IIAPBPCI_01286 1046629.Ssal_01495 1e-251 875.5 Bacilli rumA GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016436,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070041,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.190 ko:K03215 ko00000,ko01000,ko03009 Bacteria 1TP4H@1239,4HA6M@91061,COG2265@1,COG2265@2 NA|NA|NA J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family IIAPBPCI_01287 638301.HMPREF0444_1318 1.7e-54 218.4 Carnobacteriaceae Bacteria 1V1G4@1239,27HT6@186828,4HI02@91061,COG1670@1,COG1670@2 NA|NA|NA J Acetyltransferase (GNAT) domain IIAPBPCI_01288 638301.HMPREF0444_1312 5.7e-95 353.6 Bacilli Bacteria 1V2YZ@1239,2DBDH@1,2Z8KQ@2,4HK4W@91061 NA|NA|NA IIAPBPCI_01289 264199.stu1036 8.4e-193 679.5 Bacilli ko:K07493 ko00000 Bacteria 1TP4C@1239,4HAXJ@91061,COG3328@1,COG3328@2 NA|NA|NA L Transposase IIAPBPCI_01290 1069533.Sinf_0805 1.5e-37 161.8 Bacteria ko:K07483 ko00000 Bacteria COG2963@1,COG2963@2 NA|NA|NA L transposase activity IIAPBPCI_01291 272623.L0432 3.6e-154 550.8 Bacilli ko:K07497 ko00000 Bacteria 1TU21@1239,4HDK4@91061,COG2801@1,COG2801@2 NA|NA|NA L COG2801 Transposase and inactivated derivatives IIAPBPCI_01292 585203.SMSK564_1364 8.9e-11 72.4 Streptococcus mitis Bacteria 1U4XP@1239,2DKGP@1,2TQDW@28037,309EM@2,4IEP2@91061 NA|NA|NA IIAPBPCI_01293 435842.HMPREF0848_00317 7.8e-59 233.0 Bacilli ko:K13281 ko00000,ko01000 Bacteria 1VGGK@1239,4HP7S@91061,COG3272@1,COG3272@2 NA|NA|NA S Protein of unknown function (DUF1722) IIAPBPCI_01294 1046629.Ssal_01457 3.3e-64 250.8 Bacilli yqeB Bacteria 1V717@1239,2AK1X@1,31ARI@2,4HIQ9@91061 NA|NA|NA S Pyrimidine dimer DNA glycosylase IIAPBPCI_01296 1046629.Ssal_01455 2.4e-33 147.5 Firmicutes Bacteria 1VZAT@1239,2FBVV@1,3440F@2 NA|NA|NA IIAPBPCI_01297 1046629.Ssal_01454 1.7e-26 124.8 Bacilli Bacteria 1VBYM@1239,4HM2K@91061,COG1266@1,COG1266@2 NA|NA|NA S CAAX protease self-immunity IIAPBPCI_01298 1046629.Ssal_01454 1e-30 139.0 Bacilli Bacteria 1VBYM@1239,4HM2K@91061,COG1266@1,COG1266@2 NA|NA|NA S CAAX protease self-immunity IIAPBPCI_01299 1046629.Ssal_01453 1.9e-27 127.9 Bacilli estA Bacteria 1V1CQ@1239,4HGVZ@91061,COG2755@1,COG2755@2 NA|NA|NA E GDSL-like Lipase/Acylhydrolase IIAPBPCI_01300 1046629.Ssal_01451 2.1e-95 355.1 Firmicutes Bacteria 1VYAW@1239,2F636@1,33YMH@2 NA|NA|NA IIAPBPCI_01301 322159.STER_0709 0.0 2040.8 Bacilli cas9 ko:K09952 ko00000,ko01000,ko02048 Bacteria 1TPSD@1239,4HE0R@91061,COG3513@1,COG3513@2 NA|NA|NA L CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer IIAPBPCI_01302 264199.stu0658 3.2e-172 610.9 Bacilli cas1 ko:K15342 ko00000,ko02048,ko03400 Bacteria 1TT0J@1239,4HC5E@91061,COG1518@1,COG1518@2 NA|NA|NA L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette IIAPBPCI_01303 322159.STER_0711 1.8e-53 214.9 Bacteria cas2 ko:K09951 ko00000,ko02048 Bacteria COG3512@1,COG3512@2 NA|NA|NA L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette IIAPBPCI_01304 322159.STER_0712 6.7e-198 696.4 Firmicutes Bacteria 1W43F@1239,2DZ2B@1,34C6V@2 NA|NA|NA S CRISPR-associated protein Csn2 subfamily St IIAPBPCI_01305 322159.STER_0713 9.3e-147 526.2 Bacilli ycgQ ko:K08986 ko00000 Bacteria 1V3EX@1239,4HGMG@91061,COG3689@1,COG3689@2 NA|NA|NA S TIGR03943 family IIAPBPCI_01306 322159.STER_0714 1.4e-156 558.9 Bacilli XK27_03015 ko:K07089 ko00000 Bacteria 1TQHK@1239,4HB25@91061,COG0701@1,COG0701@2 NA|NA|NA S permease IIAPBPCI_01308 322159.STER_0716 0.0 1329.7 Bacilli yhgF GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0009314,GO:0009628,GO:0010212,GO:0044424,GO:0044444,GO:0044464,GO:0050896 ko:K06959 ko00000 Bacteria 1TPFE@1239,4HAGY@91061,COG2183@1,COG2183@2 NA|NA|NA K Transcriptional accessory protein IIAPBPCI_01309 264199.stu0665 1.9e-40 171.4 Bacilli pspC ko:K03973 ko00000,ko02048,ko03000 Bacteria 1VF0M@1239,4IRAN@91061,COG1983@1,COG1983@2 NA|NA|NA KT PspC domain IIAPBPCI_01310 322159.STER_0719 4.9e-168 597.0 Bacilli hprK GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 ko:K06023 ko00000,ko01000 Bacteria 1TP5Z@1239,4HAXR@91061,COG1493@1,COG1493@2 NA|NA|NA F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion IIAPBPCI_01311 264199.stu0667 1.5e-146 525.4 Bacilli lgt GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0008961,GO:0009058,GO:0009059,GO:0009898,GO:0009987,GO:0016020,GO:0016021,GO:0016740,GO:0016757,GO:0019538,GO:0031224,GO:0031226,GO:0034645,GO:0036211,GO:0040007,GO:0042157,GO:0042158,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0071704,GO:0071944,GO:0098552,GO:0098562,GO:0140096,GO:1901564,GO:1901566,GO:1901576 2.1.1.199 ko:K03438,ko:K13292 ko00000,ko01000,ko03009 Bacteria 1TPAK@1239,4HAT0@91061,COG0682@1,COG0682@2 NA|NA|NA M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins IIAPBPCI_01313 322159.STER_0722 1.2e-68 265.8 Bacilli ytxH Bacteria 1VFY7@1239,4HNWV@91061,COG4980@1,COG4980@2 NA|NA|NA S General stress protein IIAPBPCI_01315 264199.stu0671 1.7e-176 625.2 Bacilli yegQ GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 ko:K08303 ko05120,map05120 ko00000,ko00001,ko01000,ko01002 Bacteria 1TQIZ@1239,4HA2T@91061,COG0826@1,COG0826@2 NA|NA|NA O Peptidase U32 IIAPBPCI_01316 322159.STER_0725 3.4e-252 877.1 Bacilli yegQ GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 ko:K08303 ko05120,map05120 ko00000,ko00001,ko01000,ko01002 Bacteria 1TPRE@1239,4HBEG@91061,COG0826@1,COG0826@2 NA|NA|NA O Peptidase U32 IIAPBPCI_01317 322159.STER_0726 2.7e-86 324.7 Bacilli bioY ko:K03523 ko02010,map02010 M00581,M00582 ko00000,ko00001,ko00002,ko02000 2.A.88.1,2.A.88.2 Bacteria 1VA1G@1239,4HNE8@91061,COG1268@1,COG1268@2 NA|NA|NA S biotin synthase IIAPBPCI_01319 264199.stu0676 1.1e-33 148.7 Bacilli XK27_12190 Bacteria 1VEFE@1239,4HNSP@91061,COG4443@1,COG4443@2 NA|NA|NA S protein conserved in bacteria IIAPBPCI_01320 322159.STER_0729 3e-235 820.8 Bacilli mntH GO:0008150,GO:0009987,GO:0010035,GO:0010038,GO:0010039,GO:0042221,GO:0050896,GO:0051716,GO:0070887,GO:0071241,GO:0071248,GO:0071281 ko:K03322 ko00000,ko02000 2.A.55.2.6,2.A.55.3 Bacteria 1TPT1@1239,4HAEA@91061,COG1914@1,COG1914@2 NA|NA|NA P H( )-stimulated, divalent metal cation uptake system IIAPBPCI_01322 1046629.Ssal_00039 5.1e-50 203.4 Firmicutes Bacteria 1TQ93@1239,COG3464@1,COG3464@2 NA|NA|NA L Transposase IIAPBPCI_01323 322159.STER_0151 4.9e-165 587.0 Firmicutes ko:K07485 ko00000 Bacteria 1TQ93@1239,COG3464@1,COG3464@2 NA|NA|NA L Transposase IIAPBPCI_01324 264199.stu1389 3.5e-106 391.0 Bacilli MA20_06410 Bacteria 1TRUX@1239,4HFB2@91061,COG1280@1,COG1280@2 NA|NA|NA E LysE type translocator IIAPBPCI_01325 491916.RHECIAT_PC0000880 8.6e-70 270.8 Rhizobiaceae Bacteria 1N5JR@1224,2VGXQ@28211,4BNNM@82115,COG0318@1,COG0318@2 NA|NA|NA IQ PFAM AMP-dependent synthetase and ligase IIAPBPCI_01326 1116231.SMA_1382 2e-219 768.1 Bacilli Bacteria 1TP4C@1239,4HAXJ@91061,COG3328@1,COG3328@2 NA|NA|NA L Transposase IIAPBPCI_01327 264199.stu1086 2.6e-112 411.4 Firmicutes Bacteria 1TQ93@1239,COG3464@1,COG3464@2 NA|NA|NA L Transposase IIAPBPCI_01328 264199.stu0692 3.5e-285 986.9 Bacilli lysS GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 6.1.1.6 ko:K04567 ko00970,map00970 M00359,M00360 R03658 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Bacteria 1TP2P@1239,4H9X4@91061,COG1190@1,COG1190@2 NA|NA|NA J Belongs to the class-II aminoacyl-tRNA synthetase family IIAPBPCI_01329 322159.STER_0734 1.9e-15 87.4 Bacilli Bacteria 1VWTU@1239,4HX18@91061,COG1388@1,COG1388@2 NA|NA|NA M LysM domain IIAPBPCI_01330 904306.HMPREF9192_1148 2.4e-58 231.9 Bacteria Bacteria COG1388@1,COG1388@2 NA|NA|NA M LysM domain IIAPBPCI_01331 904293.HMPREF9176_0571 3.1e-20 104.8 Bacilli Bacteria 1VVCA@1239,2BXK6@1,33WGZ@2,4HWEI@91061 NA|NA|NA IIAPBPCI_01332 264199.stu0696 6.4e-173 613.2 Bacilli ko:K07025 ko00000 Bacteria 1V5P7@1239,4HHGY@91061,COG1011@1,COG1011@2 NA|NA|NA S hydrolase IIAPBPCI_01333 264199.stu0697 4.3e-115 420.6 Bacilli pgm6 5.4.2.11,5.4.2.12 ko:K01834,ko:K15634 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230 M00001,M00002,M00003 R01518 RC00536 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Bacteria 1V7EZ@1239,4HJCK@91061,COG0406@1,COG0406@2 NA|NA|NA G Phosphoglycerate mutase IIAPBPCI_01334 264199.stu0698 7.9e-82 309.7 Bacilli ybaK ko:K03976 ko00000,ko01000,ko03016 Bacteria 1V6JF@1239,4HIH1@91061,COG2606@1,COG2606@2 NA|NA|NA S Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily IIAPBPCI_01335 264199.stu0699 4.5e-145 520.8 Bacilli XK27_00880 3.5.1.28 ko:K01447,ko:K07273 R04112 RC00064,RC00141 ko00000,ko01000 Bacteria 1V2YH@1239,4HI8U@91061,COG3757@1,COG3757@2 NA|NA|NA M Glycosyl hydrolase, family 25 IIAPBPCI_01336 1123304.AQYA01000028_gene1720 2.7e-27 128.3 Bacteria Bacteria COG2461@1,COG2461@2 NA|NA|NA P Hemerythrin HHE cation binding domain protein IIAPBPCI_01337 264199.stu0701 6.1e-114 416.8 Bacilli 1.14.14.5 ko:K04091 ko00920,map00920 R07210,R10206 RC01779,RC02556 ko00000,ko00001,ko01000 Bacteria 1VJRB@1239,4ISN7@91061,COG2141@1,COG2141@2 NA|NA|NA C COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases IIAPBPCI_01338 904306.HMPREF9192_1160 1.7e-10 70.5 Bacilli MA20_36090 Bacteria 1VEWD@1239,4IQU0@91061,COG1073@1,COG1073@2 NA|NA|NA S Protein of unknown function (DUF2974) IIAPBPCI_01339 1046629.Ssal_01417 7.9e-37 159.5 Bacilli MA20_36090 Bacteria 1VEWD@1239,4IQU0@91061,COG1073@1,COG1073@2 NA|NA|NA S Protein of unknown function (DUF2974) IIAPBPCI_01340 904306.HMPREF9192_1160 8e-18 95.5 Bacilli MA20_36090 Bacteria 1VEWD@1239,4IQU0@91061,COG1073@1,COG1073@2 NA|NA|NA S Protein of unknown function (DUF2974) IIAPBPCI_01341 264199.stu0704 3.7e-48 197.2 Bacilli sdh 1.1.1.276,1.1.1.313,1.1.1.381 ko:K05886,ko:K15373,ko:K16066 ko00240,ko00260,ko00430,ko01100,map00240,map00260,map00430,map01100 R02600,R09289,R10851,R10852 RC00087,RC00525,RC03288 ko00000,ko00001,ko01000 Bacteria 1V08N@1239,4IPTJ@91061,COG4221@1,COG4221@2 NA|NA|NA S Belongs to the short-chain dehydrogenases reductases (SDR) family IIAPBPCI_01342 435842.HMPREF0848_00357 1.7e-70 271.9 Bacilli sdh 1.1.1.276,1.1.1.313,1.1.1.381 ko:K05886,ko:K15373,ko:K16066 ko00240,ko00260,ko00430,ko01100,map00240,map00260,map00430,map01100 R02600,R09289,R10851,R10852 RC00087,RC00525,RC03288 ko00000,ko00001,ko01000 Bacteria 1V08N@1239,4IPTJ@91061,COG4221@1,COG4221@2 NA|NA|NA S Belongs to the short-chain dehydrogenases reductases (SDR) family IIAPBPCI_01343 322159.STER_0747 0.0 1941.0 Bacilli hsdR 3.1.21.3 ko:K01153 ko00000,ko01000,ko02048 Bacteria 1TP7S@1239,4HB5A@91061,COG0610@1,COG0610@2 NA|NA|NA L Subunit R is required for both nuclease and ATPase activities, but not for modification IIAPBPCI_01344 1123304.AQYA01000035_gene1027 8.7e-216 756.9 Bacilli prrC Bacteria 1TT67@1239,4HCP2@91061,COG4694@1,COG4694@2 NA|NA|NA S AAA domain IIAPBPCI_01345 264199.stu0708 5e-125 454.5 Bacilli hsdS 3.1.21.3 ko:K01154 ko00000,ko01000,ko02048 Bacteria 1TP5N@1239,4HFAV@91061,COG0732@1,COG0732@2 NA|NA|NA V type I restriction modification DNA specificity domain protein IIAPBPCI_01346 904306.HMPREF9192_1168 4.8e-105 387.1 Firmicutes Bacteria 1W2YW@1239,299SU@1,2ZWV2@2 NA|NA|NA IIAPBPCI_01347 322159.STER_0752 7.5e-135 486.5 Bacilli Bacteria 1V2TW@1239,4HHGA@91061,COG2852@1,COG2852@2 NA|NA|NA S Protein conserved in bacteria IIAPBPCI_01348 904306.HMPREF9192_1172 2.4e-303 1047.3 Bacilli hsdM 2.1.1.72 ko:K03427 ko00000,ko01000,ko02048 Bacteria 1TPGZ@1239,4HA1J@91061,COG0286@1,COG0286@2 NA|NA|NA V type I restriction-modification system IIAPBPCI_01349 435842.HMPREF0848_00367 1.2e-49 202.2 Bacilli Bacteria 1V1A7@1239,4HG0B@91061,COG5464@1,COG5464@2 NA|NA|NA S PD-(D/E)XK nuclease family transposase IIAPBPCI_01350 1046629.Ssal_01404 1.1e-90 339.3 Bacteria Bacteria COG5464@1,COG5464@2 NA|NA|NA S double-stranded DNA endodeoxyribonuclease activity IIAPBPCI_01351 904306.HMPREF9192_1174 5.1e-163 580.5 Bacilli spd ko:K15051 ko00000 Bacteria 1TR37@1239,4HK9Z@91061,COG2169@1,COG2169@2 NA|NA|NA F DNA RNA non-specific endonuclease IIAPBPCI_01352 322159.STER_0756 9e-93 346.3 Bacilli lemA ko:K03744 ko00000 Bacteria 1V1G7@1239,4IR1J@91061,COG1704@1,COG1704@2 NA|NA|NA S LemA family IIAPBPCI_01353 904306.HMPREF9192_1176 6.4e-133 480.3 Bacilli htpX ko:K03799 M00743 ko00000,ko00002,ko01000,ko01002 Bacteria 1TP23@1239,4HB11@91061,COG0501@1,COG0501@2 NA|NA|NA O Belongs to the peptidase M48B family IIAPBPCI_01354 264199.stu0716 4.2e-75 287.3 Bacilli ko:K16924,ko:K16927 M00582 ko00000,ko00002,ko02000 3.A.1.29,3.A.1.32 Bacteria 1V5GD@1239,4HI8Y@91061,COG4720@1,COG4720@2 NA|NA|NA S Psort location CytoplasmicMembrane, score IIAPBPCI_01355 1046629.Ssal_01392 6.2e-56 223.4 Bacilli Bacteria 1VF26@1239,2DNM7@1,32Y2X@2,4HP82@91061 NA|NA|NA S Domain of unknown function (DUF4430) IIAPBPCI_01356 322159.STER_0760 0.0 1807.3 Bacilli ppc GO:0003674,GO:0003824,GO:0004611,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0008964,GO:0009060,GO:0009987,GO:0015980,GO:0016829,GO:0016830,GO:0016831,GO:0016999,GO:0017144,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045333,GO:0055114,GO:0071704,GO:0072350 4.1.1.31 ko:K01595 ko00620,ko00680,ko00710,ko00720,ko01100,ko01120,ko01200,map00620,map00680,map00710,map00720,map01100,map01120,map01200 M00168,M00170,M00171,M00172,M00173,M00346,M00374 R00345 RC02741 ko00000,ko00001,ko00002,ko01000 iJN678.ppc,iSFV_1184.SFV_4025 Bacteria 1TQB6@1239,4HCAF@91061,COG2352@1,COG2352@2 NA|NA|NA H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle IIAPBPCI_01357 264199.stu0719 2.4e-184 651.4 Bacilli holA 2.7.7.7 ko:K02340 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Bacteria 1TRM0@1239,4HBB4@91061,COG1466@1,COG1466@2 NA|NA|NA L DNA polymerase III delta subunit IIAPBPCI_01358 322159.STER_0762 8.5e-113 412.9 Bacilli sodA GO:0005575,GO:0005576 1.15.1.1 ko:K04564 ko04013,ko04068,ko04146,ko04211,ko04212,ko04213,ko05016,map04013,map04068,map04146,map04211,map04212,map04213,map05016 ko00000,ko00001,ko01000 Bacteria 1TPXT@1239,4HA6U@91061,COG0605@1,COG0605@2 NA|NA|NA C radicals which are normally produced within the cells and which are toxic to biological systems IIAPBPCI_01359 322159.STER_0151 2.6e-146 524.6 Firmicutes ko:K07485 ko00000 Bacteria 1TQ93@1239,COG3464@1,COG3464@2 NA|NA|NA L Transposase IIAPBPCI_01360 1046629.Ssal_00039 3.6e-70 270.8 Firmicutes Bacteria 1TQ93@1239,COG3464@1,COG3464@2 NA|NA|NA L Transposase IIAPBPCI_01361 322159.STER_0765 6.3e-191 673.7 Bacilli 3.5.2.6 ko:K01467,ko:K17836 ko00311,ko01130,ko01501,ko02020,map00311,map01130,map01501,map02020 M00627,M00628 R06363 RC01499 ko00000,ko00001,ko00002,ko01000,ko01504 Bacteria 1VHF8@1239,4HU1N@91061,COG2367@1,COG2367@2 NA|NA|NA V D-alanyl-D-alanine carboxypeptidase IIAPBPCI_01362 264199.stu0722 4.4e-115 420.6 Firmicutes pilD 3.4.23.43 ko:K02236,ko:K02506,ko:K02654 M00331,M00429 ko00000,ko00002,ko01000,ko01002,ko02035,ko02044 3.A.15.2 Bacteria 1V91J@1239,COG1989@1,COG1989@2 NA|NA|NA NOU Bacterial Peptidase A24 N-terminal domain IIAPBPCI_01363 322159.STER_0767 3.2e-92 344.4 Bacilli dps ko:K04047 ko00000,ko03036 Bacteria 1VCVJ@1239,4HMBD@91061,COG0783@1,COG0783@2 NA|NA|NA P Belongs to the Dps family IIAPBPCI_01364 322159.STER_0767 4.2e-92 344.0 Bacilli dps ko:K04047 ko00000,ko03036 Bacteria 1VCVJ@1239,4HMBD@91061,COG0783@1,COG0783@2 NA|NA|NA P Belongs to the Dps family IIAPBPCI_01365 322159.STER_0768 4.4e-79 300.4 Bacilli perR GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0032991,GO:0032993,GO:0043565,GO:0044212,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1990837,GO:2000112,GO:2000113,GO:2001141 ko:K03711,ko:K09825 ko00000,ko03000 Bacteria 1V400@1239,4HHF8@91061,COG0735@1,COG0735@2 NA|NA|NA P Belongs to the Fur family IIAPBPCI_01366 264199.stu0727 1.9e-27 127.9 Bacilli yqgQ Bacteria 1VK83@1239,4HRG2@91061,COG4483@1,COG4483@2 NA|NA|NA S protein conserved in bacteria IIAPBPCI_01367 264199.stu0728 7.8e-177 626.3 Bacilli glk GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.7.1.2 ko:K00845 ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200 M00001,M00549 R00299,R01600,R01786 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 iSB619.SA_RS07790 Bacteria 1TPKW@1239,4HBAU@91061,COG1940@1,COG1940@2 NA|NA|NA G Glucokinase IIAPBPCI_01368 264199.stu0729 0.0 1194.1 Bacilli typA GO:0000027,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006996,GO:0008150,GO:0009266,GO:0009408,GO:0009409,GO:0009628,GO:0009987,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043933,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0065003,GO:0070925,GO:0071826,GO:0071840 ko:K06207 ko00000 Bacteria 1TQ5Y@1239,4HAQ6@91061,COG1217@1,COG1217@2 NA|NA|NA T GTP-binding protein TypA IIAPBPCI_01370 264199.stu0731 1.6e-252 878.2 Bacilli murD 6.3.2.9 ko:K01925 ko00471,ko00550,ko01100,map00471,map00550,map01100 R02783 RC00064,RC00141 ko00000,ko00001,ko01000,ko01011 Bacteria 1TQ3P@1239,4HA5P@91061,COG0771@1,COG0771@2 NA|NA|NA M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) IIAPBPCI_01371 264199.stu0732 3.9e-201 707.2 Bacilli murG 2.4.1.227 ko:K02563 ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112 R05032,R05662 RC00005,RC00049 ko00000,ko00001,ko01000,ko01011 GT28 Bacteria 1TQFT@1239,4HBAQ@91061,COG0707@1,COG0707@2 NA|NA|NA M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) IIAPBPCI_01372 264199.stu0733 8.2e-170 603.2 Firmicutes divIB ko:K03589 ko04112,map04112 ko00000,ko00001,ko03036 Bacteria 1VHEY@1239,COG1589@1,COG1589@2 NA|NA|NA D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex IIAPBPCI_01373 264199.stu0734 2.3e-251 874.4 Bacilli ftsA GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0009898,GO:0009987,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032153,GO:0044425,GO:0044459,GO:0044464,GO:0051301,GO:0071944,GO:0098552,GO:0098562 ko:K03590 ko04112,map04112 ko00000,ko00001,ko03036,ko04812 Bacteria 1TP1Z@1239,4H9NF@91061,COG0849@1,COG0849@2 NA|NA|NA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring IIAPBPCI_01374 264199.stu0735 2.7e-236 824.3 Bacilli ftsZ GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005515,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0030428,GO:0032153,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035639,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0044424,GO:0044464,GO:0051301,GO:0097159,GO:0097367,GO:1901265,GO:1901363 ko:K03531 ko04112,map04112 ko00000,ko00001,ko02048,ko03036,ko04812 Bacteria 1TP6W@1239,4H9WZ@91061,COG0206@1,COG0206@2 NA|NA|NA D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity IIAPBPCI_01375 264199.stu0736 5.1e-122 443.7 Bacilli ylmE GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0008144,GO:0019842,GO:0030170,GO:0036094,GO:0043167,GO:0043168,GO:0044464,GO:0048037,GO:0050662,GO:0070279,GO:0097159,GO:1901363 ko:K06997 ko00000 Bacteria 1TRDN@1239,4HC45@91061,COG0325@1,COG0325@2 NA|NA|NA S Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis IIAPBPCI_01376 322159.STER_0779 1.4e-96 359.0 Bacteria sepF GO:0000910,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0007049,GO:0008150,GO:0009987,GO:0016020,GO:0016043,GO:0022402,GO:0022607,GO:0032506,GO:0042802,GO:0044085,GO:0044464,GO:0051301,GO:0071840,GO:0071944,GO:0090529 ko:K09772 ko00000,ko03036 Bacteria COG1799@1,COG1799@2 NA|NA|NA D cell septum assembly IIAPBPCI_01377 322159.STER_0780 2e-34 151.4 Bacteria yggT GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K02221 ko00000,ko02044 Bacteria COG0762@1,COG0762@2 NA|NA|NA D integral membrane protein IIAPBPCI_01378 264199.stu0739 8e-143 513.1 Bacteria ylmH ko:K02487,ko:K06596 ko02020,ko02025,map02020,map02025 M00507 ko00000,ko00001,ko00002,ko01001,ko02022,ko02035 Bacteria COG2302@1,COG2302@2 NA|NA|NA T S4 RNA-binding domain IIAPBPCI_01379 322159.STER_0782 3.3e-134 484.6 Bacilli divIVA ko:K04074 ko00000,ko03036 Bacteria 1V27M@1239,4HJYN@91061,COG3599@1,COG3599@2 NA|NA|NA D Cell division protein DivIVA IIAPBPCI_01380 264199.stu0741 0.0 1869.7 Bacilli ileS GO:0003674,GO:0003824,GO:0004812,GO:0004822,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006428,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.5 ko:K01870 ko00970,map00970 M00359,M00360 R03656 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 iG2583_1286.G2583_0027,iPC815.YPO0475 Bacteria 1TPS7@1239,4HAWB@91061,COG0060@1,COG0060@2 NA|NA|NA J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) IIAPBPCI_01381 322159.STER_0786 7.9e-230 802.7 Bacilli mntH Bacteria 1V04N@1239,4HBF6@91061,COG1914@1,COG1914@2 NA|NA|NA P Mn2 and Fe2 transporters of the NRAMP family IIAPBPCI_01382 264199.stu0746 2e-45 188.0 Bacilli rpmE2 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006950,GO:0007154,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009267,GO:0009605,GO:0009987,GO:0009991,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0031667,GO:0031668,GO:0031669,GO:0032991,GO:0033554,GO:0034224,GO:0034641,GO:0034645,GO:0042594,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050896,GO:0051716,GO:0071496,GO:0071704,GO:0120127,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02909 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1VEGU@1239,4HNQF@91061,COG0254@1,COG0254@2 NA|NA|NA J 50S ribosomal protein L31 IIAPBPCI_01383 264199.stu0747 1e-173 615.9 Bacilli apbE 2.7.1.180 ko:K03734 ko00000,ko01000 Bacteria 1TR9C@1239,4HDFE@91061,COG1477@1,COG1477@2 NA|NA|NA H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein IIAPBPCI_01384 264199.stu0748 6.5e-176 623.2 Bacilli nrnA GO:0008150,GO:0040007 3.1.13.3,3.1.3.7 ko:K06881 ko00920,ko01100,ko01120,map00920,map01100,map01120 R00188,R00508 RC00078 ko00000,ko00001,ko01000,ko03400 Bacteria 1TPXX@1239,4H9ZW@91061,COG0618@1,COG0618@2 NA|NA|NA S domain protein IIAPBPCI_01385 322159.STER_0790 2.6e-154 551.2 Bacilli gst ko:K11209 ko00000,ko01000 Bacteria 1TPZ7@1239,4HD0K@91061,COG0625@1,COG0625@2 NA|NA|NA O Glutathione S-transferase IIAPBPCI_01386 264199.stu0750 6.7e-187 659.8 Bacilli add 3.5.4.4 ko:K01488,ko:K02029 ko00230,ko01100,ko05340,map00230,map01100,map05340 M00236 R01560,R02556 RC00477 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.3 iHN637.CLJU_RS13960 Bacteria 1U44B@1239,4HCES@91061,COG1816@1,COG1816@2 NA|NA|NA F Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism IIAPBPCI_01387 264199.stu0751 3.5e-111 407.5 Bacilli tdk GO:0003674,GO:0003824,GO:0004797,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006213,GO:0006259,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009120,GO:0009123,GO:0009124,GO:0009157,GO:0009162,GO:0009165,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0018130,GO:0019136,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046104,GO:0046125,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0090304,GO:0090407,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.1.21 ko:K00857 ko00240,ko00983,ko01100,map00240,map00983,map01100 R01567,R02099,R08233 RC00002,RC00017 ko00000,ko00001,ko01000 iAF1260.b1238,iBWG_1329.BWG_1065,iECDH10B_1368.ECDH10B_1298,iECDH1ME8569_1439.ECDH1ME8569_1176,iEcDH1_1363.EcDH1_2411,iJO1366.b1238,iJR904.b1238,iPC815.YPO2176,iY75_1357.Y75_RS06470 Bacteria 1TRVM@1239,4HA4A@91061,COG1435@1,COG1435@2 NA|NA|NA F thymidine kinase IIAPBPCI_01388 264199.stu0752 1.8e-190 671.8 Bacilli prfA ko:K02835 ko00000,ko03012 Bacteria 1TQ7V@1239,4H9MB@91061,COG0216@1,COG0216@2 NA|NA|NA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA IIAPBPCI_01389 322159.STER_0794 6.8e-153 546.6 Bacilli prmB GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006304,GO:0006305,GO:0006306,GO:0006464,GO:0006479,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009007,GO:0009008,GO:0009987,GO:0016740,GO:0016741,GO:0018364,GO:0019538,GO:0032259,GO:0032775,GO:0034641,GO:0036009,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0044728,GO:0046483,GO:0071704,GO:0090304,GO:0140096,GO:0140097,GO:1901360,GO:1901564 2.1.1.297,2.1.1.298 ko:K02493,ko:K07320 R10806 RC00003,RC03279 ko00000,ko01000,ko03009,ko03012 Bacteria 1TSMA@1239,4HC6W@91061,COG2890@1,COG2890@2 NA|NA|NA J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif IIAPBPCI_01390 264199.stu0754 2.5e-109 401.4 Bacilli ywlC GO:0000049,GO:0000166,GO:0002949,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006450,GO:0006725,GO:0006807,GO:0008033,GO:0008144,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0017076,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034470,GO:0034641,GO:0034660,GO:0035639,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0065007,GO:0065008,GO:0070525,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363 2.7.7.87,3.1.3.48 ko:K01104,ko:K07566 R10463 RC00745 ko00000,ko01000,ko03009,ko03016 Bacteria 1TP1I@1239,4HA7W@91061,COG0009@1,COG0009@2 NA|NA|NA J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine IIAPBPCI_01391 322159.STER_0796 2e-233 814.7 Bacilli glyA 2.1.2.1 ko:K00600 ko00260,ko00460,ko00630,ko00670,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko01523,map00260,map00460,map00630,map00670,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map01523 M00140,M00141,M00346,M00532 R00945,R09099 RC00022,RC00112,RC01583,RC02958 ko00000,ko00001,ko00002,ko01000 Bacteria 1TQVM@1239,4HA5K@91061,COG0112@1,COG0112@2 NA|NA|NA E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism IIAPBPCI_01392 264199.stu0756 1e-176 625.9 Bacilli ndpA GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003723,GO:0003727,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0009295,GO:0042802,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043590,GO:0044424,GO:0044464,GO:0097159,GO:1901363 ko:K06899 ko00000,ko03036 Bacteria 1V437@1239,4IQXJ@91061,COG3081@1,COG3081@2 NA|NA|NA S 37-kD nucleoid-associated bacterial protein IIAPBPCI_01393 264199.stu0757 1.6e-106 392.1 Bacteria pvaA ko:K02395 ko00000,ko02035 Bacteria COG0741@1,COG0741@2 NA|NA|NA M lytic transglycosylase activity IIAPBPCI_01394 322159.STER_0799 0.0 1082.0 Bacilli yfiB1 ko:K06147,ko:K06148,ko:K18887 ko02010,map02010 M00706 ko00000,ko00001,ko00002,ko02000 3.A.1,3.A.1.106,3.A.1.109,3.A.1.21 Bacteria 1TP0B@1239,4H9SC@91061,COG1132@1,COG1132@2 NA|NA|NA V abc transporter atp-binding protein IIAPBPCI_01395 322159.STER_0800 0.0 1098.2 Bacilli XK27_10035 ko:K06147,ko:K11085 ko02010,map02010 ko00000,ko00001,ko01000,ko02000 3.A.1.106,3.A.1.109,3.A.1.21 Bacteria 1TP0B@1239,4HCVN@91061,COG1132@1,COG1132@2 NA|NA|NA V abc transporter atp-binding protein IIAPBPCI_01396 1000570.HMPREF9966_1459 1.2e-09 68.6 Streptococcus anginosus group Bacteria 1TW0K@1239,2DIU2@1,3044G@2,42EHI@671232,4I4PC@91061 NA|NA|NA S D-Ala-teichoic acid biosynthesis protein IIAPBPCI_01397 264199.stu0761 6e-296 1022.7 Bacilli dltA GO:0000166,GO:0000270,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0006810,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016208,GO:0016874,GO:0016879,GO:0016881,GO:0017076,GO:0022857,GO:0030203,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034645,GO:0036094,GO:0042546,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0051179,GO:0051234,GO:0055085,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.13 ko:K03367 ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150 M00725 R02718 RC00037,RC00094 ko00000,ko00001,ko00002,ko01000,ko01504 Bacteria 1TPTH@1239,4HAHU@91061,COG1020@1,COG1020@2 NA|NA|NA Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall IIAPBPCI_01398 264199.stu0762 1.6e-235 821.6 Bacilli dltB ko:K03739 ko01503,ko02020,ko05150,map01503,map02020,map05150 M00725 ko00000,ko00001,ko00002,ko01504 Bacteria 1TP52@1239,4HBQG@91061,COG1696@1,COG1696@2 NA|NA|NA M Membrane protein involved in D-alanine export IIAPBPCI_01399 264199.stu0763 2.2e-35 154.5 Bacilli dltC GO:0000270,GO:0003674,GO:0005215,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0006810,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0022857,GO:0030203,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0051179,GO:0051234,GO:0055085,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 6.1.1.13 ko:K02078,ko:K14188 ko00473,ko01503,ko02020,ko05150,map00473,map01503,map02020,map05150 M00725 R02718 RC00037,RC00094 ko00000,ko00001,ko00002,ko01000,ko01504 Bacteria 1VFQI@1239,4HNIH@91061,COG0236@1,COG0236@2 NA|NA|NA IQ Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall IIAPBPCI_01400 322159.STER_0805 3.7e-227 793.9 Bacilli dltD ko:K03740 ko01503,ko02020,ko05150,map01503,map02020,map05150 M00725 ko00000,ko00001,ko00002,ko01504 Bacteria 1TSZU@1239,4HC3H@91061,COG3966@1,COG3966@2 NA|NA|NA M Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) IIAPBPCI_01401 264199.stu1787 4.9e-57 226.9 Firmicutes ko:K07497 ko00000 Bacteria 1TQQY@1239,COG2801@1,COG2801@2 NA|NA|NA L Integrase core domain protein IIAPBPCI_01402 264199.stu0036 4.2e-10 69.3 Bacteria ko:K07483 ko00000 Bacteria COG2963@1,COG2963@2 NA|NA|NA L transposase activity IIAPBPCI_01403 435842.HMPREF0848_01320 3.6e-39 167.2 Bacilli ko:K07483 ko00000 Bacteria 1VDX9@1239,4HRT2@91061,COG2963@1,COG2963@2 NA|NA|NA L Transposase IIAPBPCI_01404 264199.stu0770 0.0 1635.2 Bacilli 3.6.3.8 ko:K01537,ko:K12955 ko00000,ko01000 3.A.3.2,3.A.3.24 Bacteria 1TPF5@1239,4H9S5@91061,COG0474@1,COG0474@2 NA|NA|NA P cation transport ATPase IIAPBPCI_01405 264199.stu0771 0.0 1142.9 Bacilli pabB GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009108,GO:0009396,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042398,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0046820,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.6.1.85,4.1.3.27,4.1.3.38 ko:K01665,ko:K02619,ko:K03342,ko:K13503,ko:K13950 ko00400,ko00790,ko01100,ko01110,ko01130,ko01230,map00400,map00790,map01100,map01110,map01130,map01230 M00023 R00985,R00986,R01716,R05553 RC00010,RC01418,RC01843,RC02148,RC02414 ko00000,ko00001,ko00002,ko01000,ko01007 Bacteria 1TQAP@1239,4HBKC@91061,COG0115@1,COG0115@2,COG0147@1,COG0147@2 NA|NA|NA EH component I IIAPBPCI_01407 264199.stu0785 0.0 1490.3 Bacilli metE GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0003871,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006464,GO:0006479,GO:0006520,GO:0006555,GO:0006575,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008172,GO:0008213,GO:0008276,GO:0008652,GO:0008705,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016020,GO:0016053,GO:0016740,GO:0016741,GO:0019538,GO:0019752,GO:0030312,GO:0032259,GO:0034641,GO:0035999,GO:0036211,GO:0040007,GO:0042084,GO:0042085,GO:0042558,GO:0043170,GO:0043412,GO:0043414,GO:0043436,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046653,GO:0050667,GO:0051186,GO:0071704,GO:0071944,GO:0140096,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.1.14 ko:K00549 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 M00017 R04405,R09365 RC00035,RC00113,RC01241 ko00000,ko00001,ko00002,ko01000 iE2348C_1286.E2348C_4130,iECO103_1326.ECO103_4334,iECO111_1330.ECO111_4657,iECO26_1355.ECO26_4756,iECW_1372.ECW_m4131,iEKO11_1354.EKO11_4528,iPC815.YPO3788,iWFL_1372.ECW_m4131 Bacteria 1TP2H@1239,4H9QC@91061,COG0620@1,COG0620@2 NA|NA|NA E Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation IIAPBPCI_01408 264199.stu0786 1.1e-164 585.9 Bacilli metF GO:0000166,GO:0003674,GO:0003824,GO:0004489,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006575,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009396,GO:0009987,GO:0016043,GO:0016053,GO:0016491,GO:0016645,GO:0016646,GO:0018130,GO:0019438,GO:0019752,GO:0022607,GO:0034641,GO:0036094,GO:0042398,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043436,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0048037,GO:0050660,GO:0050662,GO:0051186,GO:0051188,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:0071949,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 1.5.1.20 ko:K00297,ko:K21010 ko00670,ko00720,ko01100,ko01120,ko01200,ko01523,ko02025,map00670,map00720,map01100,map01120,map01200,map01523,map02025 M00377 R01224,R07168 RC00081 ko00000,ko00001,ko00002,ko01000 iPC815.YPO0117,iSBO_1134.SBO_3961 Bacteria 1TQFE@1239,4HGHI@91061,COG0685@1,COG0685@2 NA|NA|NA C reductase IIAPBPCI_01409 322159.STER_0833 0.0 1114.8 Bacilli pgm GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 5.4.2.2,5.4.2.8 ko:K01835,ko:K01840 ko00010,ko00030,ko00051,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00051,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130 M00114,M00549 R00959,R01057,R01818,R08639 RC00408 ko00000,ko00001,ko00002,ko01000 Bacteria 1TP2N@1239,4HADU@91061,COG1109@1,COG1109@2 NA|NA|NA G Phosphoglucomutase IIAPBPCI_01410 264199.stu0788 1.1e-93 349.4 Bacilli panT GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 Bacteria 1V2M1@1239,4HFPD@91061,COG4684@1,COG4684@2 NA|NA|NA S ECF transporter, substrate-specific component IIAPBPCI_01411 264199.stu0789 1.4e-90 339.0 Bacilli coaBC 4.1.1.36,6.3.2.5 ko:K01598,ko:K13038,ko:K21977 ko00770,ko01100,map00770,map01100 M00120 R03269,R04231 RC00064,RC00090,RC00822 ko00000,ko00001,ko00002,ko01000 Bacteria 1TPP3@1239,4HAK8@91061,COG0452@1,COG0452@2 NA|NA|NA H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine IIAPBPCI_01412 264199.stu0790 2.8e-120 438.0 Bacilli coaB 4.1.1.36,6.3.2.5 ko:K01598,ko:K13038,ko:K21977 ko00770,ko01100,map00770,map01100 M00120 R03269,R04231 RC00064,RC00090,RC00822 ko00000,ko00001,ko00002,ko01000 Bacteria 1V7YG@1239,4HMIF@91061,COG0452@1,COG0452@2 NA|NA|NA H Phosphopantothenate-cysteine ligase IIAPBPCI_01413 322159.STER_0837 0.0 1093.2 Bacilli fhs GO:0003674,GO:0003824,GO:0004329,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006144,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009112,GO:0009113,GO:0009256,GO:0009257,GO:0009396,GO:0009987,GO:0016053,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0016874,GO:0016879,GO:0018130,GO:0019238,GO:0019438,GO:0019752,GO:0034641,GO:0042398,GO:0042440,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046112,GO:0046148,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:0072522,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.3 ko:K01938 ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200 M00140,M00377 R00943 RC00026,RC00111 ko00000,ko00001,ko00002,ko01000 Bacteria 1TP6N@1239,4HA2X@91061,COG2759@1,COG2759@2 NA|NA|NA F Belongs to the formate--tetrahydrofolate ligase family IIAPBPCI_01414 904306.HMPREF9192_1233 1.2e-118 432.6 Bacilli Bacteria 1V295@1239,4HG3X@91061,COG0745@1,COG0745@2 NA|NA|NA T Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain IIAPBPCI_01415 904306.HMPREF9192_1234 4.1e-43 180.6 Bacilli Bacteria 1UHNC@1239,4IS4A@91061,COG0642@1,COG2205@2 NA|NA|NA T PhoQ Sensor IIAPBPCI_01416 264199.stu0795 1.7e-120 438.7 Bacilli Bacteria 1UHNC@1239,4IS4A@91061,COG0642@1,COG2205@2 NA|NA|NA T PhoQ Sensor IIAPBPCI_01417 264199.stu0797 5.1e-122 443.7 Bacilli ko:K07483 ko00000 Bacteria 1V2T5@1239,4HFZ1@91061,COG2963@1,COG2963@2 NA|NA|NA L Transposase IIAPBPCI_01418 264199.stu0796 1.2e-165 589.0 Firmicutes Bacteria 1TQEG@1239,COG2801@1,COG2801@2 NA|NA|NA L integrase core domain IIAPBPCI_01419 264199.stu0798 1.3e-29 135.2 Bacteria rpsT GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0004857,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008073,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030234,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0042979,GO:0043043,GO:0043086,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050790,GO:0065003,GO:0065007,GO:0065009,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:0098772,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02968 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria COG0268@1,COG0268@2 NA|NA|NA J rRNA binding IIAPBPCI_01420 264199.stu0799 5.5e-172 610.1 Bacilli coaA GO:0003674,GO:0003824,GO:0004594,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.33 ko:K00867 ko00770,ko01100,map00770,map01100 M00120 R02971,R03018,R04391 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 iECDH1ME8569_1439.ECDH1ME8569_3838,iECH74115_1262.ECH74115_5439,iECSE_1348.ECSE_4265,iECSF_1327.ECSF_3833,iECSP_1301.ECSP_5045,iECW_1372.ECW_m4332,iEcDH1_1363.EcDH1_4016,iEcolC_1368.EcolC_4046,iPC815.YPO3758,iSFV_1184.SFV_4047,iSFxv_1172.SFxv_4418,iWFL_1372.ECW_m4332,iZ_1308.Z5545 Bacteria 1TPHJ@1239,4HA4K@91061,COG1072@1,COG1072@2 NA|NA|NA F Pantothenic acid kinase IIAPBPCI_01421 322159.STER_0852 3.7e-105 387.5 Bacilli rsmC GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016740,GO:0016741,GO:0032259,GO:0044424,GO:0044464 2.1.1.172 ko:K00564 R07234 RC00003 ko00000,ko01000,ko03009 Bacteria 1V3JX@1239,4IR00@91061,COG2813@1,COG2813@2 NA|NA|NA J Methyltransferase small domain protein IIAPBPCI_01422 1046629.Ssal_00947 2.3e-26 124.4 Bacilli pdp GO:0003674,GO:0003824,GO:0004645,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016740,GO:0016757,GO:0016758,GO:0044424,GO:0044444,GO:0044464 2.4.2.2,2.4.2.4 ko:K00756,ko:K00758 ko00240,ko00983,ko01100,ko05219,map00240,map00983,map01100,map05219 R01570,R01876,R02296,R02484,R08222,R08230 RC00063 ko00000,ko00001,ko01000 Bacteria 1TPCH@1239,4H9NP@91061,COG0213@1,COG0213@2 NA|NA|NA F Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate IIAPBPCI_01423 264199.stu0802 3e-23 113.6 Bacteria pdp GO:0003674,GO:0003824,GO:0004645,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016740,GO:0016757,GO:0016758,GO:0044424,GO:0044444,GO:0044464 2.4.2.2,2.4.2.4 ko:K00756,ko:K00758 ko00240,ko00983,ko01100,ko05219,map00240,map00983,map01100,map05219 R01570,R01876,R02296,R02484,R08222,R08230 RC00063 ko00000,ko00001,ko01000 Bacteria COG0213@1,COG0213@2 NA|NA|NA F phosphorylase activity IIAPBPCI_01424 435842.HMPREF0848_00806 6.1e-94 350.5 Bacilli pdp GO:0003674,GO:0003824,GO:0004645,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016740,GO:0016757,GO:0016758,GO:0044424,GO:0044444,GO:0044464 2.4.2.2,2.4.2.4 ko:K00756,ko:K00758 ko00240,ko00983,ko01100,ko05219,map00240,map00983,map01100,map05219 R01570,R01876,R02296,R02484,R08222,R08230 RC00063 ko00000,ko00001,ko01000 Bacteria 1TPCH@1239,4H9NP@91061,COG0213@1,COG0213@2 NA|NA|NA F Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate IIAPBPCI_01425 264199.stu0804 1.1e-10 71.6 Bacteria pdp GO:0003674,GO:0003824,GO:0004645,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016740,GO:0016757,GO:0016758,GO:0044424,GO:0044444,GO:0044464 2.4.2.2,2.4.2.4 ko:K00756,ko:K00758 ko00240,ko00983,ko01100,ko05219,map00240,map00983,map01100,map05219 R01570,R01876,R02296,R02484,R08222,R08230 RC00063 ko00000,ko00001,ko01000 Bacteria COG0213@1,COG0213@2 NA|NA|NA F phosphorylase activity IIAPBPCI_01426 1046629.Ssal_00948 2.9e-30 137.5 Bacilli deoC GO:0003674,GO:0003824,GO:0004139,GO:0005975,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009166,GO:0009262,GO:0009264,GO:0009987,GO:0016052,GO:0016829,GO:0016830,GO:0016832,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 4.1.2.4,5.4.2.8 ko:K01619,ko:K01840 ko00030,ko00051,ko00520,ko01100,ko01110,ko01130,map00030,map00051,map00520,map01100,map01110,map01130 M00114 R01066,R01818 RC00408,RC00436,RC00437 ko00000,ko00001,ko00002,ko01000 iSB619.SA_RS00835 Bacteria 1TPAJ@1239,4HAAJ@91061,COG0274@1,COG0274@2 NA|NA|NA F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate IIAPBPCI_01427 264199.stu0806 4e-63 247.3 Bacilli deoC GO:0003674,GO:0003824,GO:0004139,GO:0005975,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009166,GO:0009262,GO:0009264,GO:0009987,GO:0016052,GO:0016829,GO:0016830,GO:0016832,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 4.1.2.4,5.4.2.8 ko:K01619,ko:K01840 ko00030,ko00051,ko00520,ko01100,ko01110,ko01130,map00030,map00051,map00520,map01100,map01110,map01130 M00114 R01066,R01818 RC00408,RC00436,RC00437 ko00000,ko00001,ko00002,ko01000 iSB619.SA_RS00835 Bacteria 1TPAJ@1239,4HAAJ@91061,COG0274@1,COG0274@2 NA|NA|NA F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate IIAPBPCI_01428 264199.stu0807 4.7e-57 226.9 Bacilli cdd 2.4.2.2,3.5.4.5 ko:K00756,ko:K01489 ko00240,ko00983,ko01100,map00240,map00983,map01100 R01570,R01876,R01878,R02296,R02484,R02485,R08221 RC00063,RC00074,RC00514 ko00000,ko00001,ko01000 iSB619.SA_RS07895 Bacteria 1V6IP@1239,4HIJ3@91061,COG0295@1,COG0295@2 NA|NA|NA F This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis IIAPBPCI_01429 322159.STER_0856 1.6e-191 675.2 Bacilli tcsA ko:K02058,ko:K07335 M00221 ko00000,ko00002,ko02000 3.A.1.2 Bacteria 1TPEU@1239,4HANH@91061,COG1744@1,COG1744@2 NA|NA|NA S ABC-type transport system, periplasmic component surface lipoprotein IIAPBPCI_01430 322159.STER_0857 6.4e-282 976.1 Bacilli xylG 3.6.3.17 ko:K02056,ko:K06400 M00221 ko00000,ko00002,ko01000,ko02000 3.A.1.2 Bacteria 1UYQA@1239,4HVSH@91061,COG3845@1,COG3845@2 NA|NA|NA S ABC transporter, ATP-binding protein IIAPBPCI_01431 322159.STER_0858 4.7e-191 673.7 Bacilli yufP GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008150,GO:0008643,GO:0015144,GO:0015145,GO:0015749,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0034219,GO:0044425,GO:0044464,GO:0051119,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944 ko:K02057 M00221 ko00000,ko00002,ko02000 3.A.1.2 Bacteria 1TP1F@1239,4H9VE@91061,COG4603@1,COG4603@2 NA|NA|NA S Belongs to the binding-protein-dependent transport system permease family IIAPBPCI_01432 264199.stu0811 1e-168 599.4 Bacilli yufQ ko:K02057 M00221 ko00000,ko00002,ko02000 3.A.1.2 Bacteria 1TP8Y@1239,4HAX4@91061,COG1079@1,COG1079@2 NA|NA|NA S Belongs to the binding-protein-dependent transport system permease family IIAPBPCI_01433 264199.stu0812 2e-120 438.3 Bacilli ycbL GO:0003674,GO:0003824,GO:0004416,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0006082,GO:0006089,GO:0008150,GO:0008152,GO:0009056,GO:0009438,GO:0009987,GO:0016787,GO:0016788,GO:0016790,GO:0019243,GO:0019752,GO:0032787,GO:0042180,GO:0042182,GO:0043436,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046185,GO:0051596,GO:0061727,GO:0071704,GO:1901575,GO:1901615 3.1.2.6 ko:K01069 ko00620,map00620 R01736 RC00004,RC00137 ko00000,ko00001,ko01000 Bacteria 1V6FA@1239,4HHRQ@91061,COG0491@1,COG0491@2 NA|NA|NA S COG0491 Zn-dependent hydrolases, including glyoxylases IIAPBPCI_01434 904306.HMPREF9192_1246 0.0 1502.3 Bacilli dinG GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008408,GO:0009058,GO:0009059,GO:0009360,GO:0009987,GO:0016020,GO:0016787,GO:0016788,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0042575,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0044776,GO:0045004,GO:0045005,GO:0046483,GO:0050896,GO:0051716,GO:0061695,GO:0071704,GO:0071944,GO:0090304,GO:0090305,GO:1901360,GO:1901576,GO:1902494,GO:1990234 2.7.7.7,3.6.4.12 ko:K02342,ko:K03722 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Bacteria 1TQHQ@1239,4HB2Y@91061,COG1199@1,COG1199@2,COG2176@1,COG2176@2 NA|NA|NA L helicase involved in DNA repair and perhaps also replication IIAPBPCI_01435 322159.STER_0862 3.1e-81 307.8 Bacilli ypmB Bacteria 1VA2H@1239,4HNMM@91061,COG5353@1,COG5353@2 NA|NA|NA S Protein conserved in bacteria IIAPBPCI_01436 264199.stu0817 1.6e-216 758.4 Bacilli aspB GO:0003674,GO:0003824,GO:0008483,GO:0016740,GO:0016769,GO:0047297 2.6.1.1,2.6.1.14 ko:K00812,ko:K22457 ko00220,ko00250,ko00270,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230 R00355,R00694,R00734,R00896,R01346,R02433,R02619,R05052 RC00006,RC00025 ko00000,ko00001,ko01000,ko01007 iHN637.CLJU_RS06550 Bacteria 1TP0J@1239,4HA13@91061,COG0436@1,COG0436@2 NA|NA|NA E Aminotransferase IIAPBPCI_01437 264199.stu0818 4.2e-261 906.7 Bacilli asnS GO:0003674,GO:0003824,GO:0004812,GO:0004816,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006421,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.22 ko:K01893 ko00970,map00970 M00359,M00360 R03648 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Bacteria 1TP38@1239,4H9YH@91061,COG0017@1,COG0017@2 NA|NA|NA J Catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA IIAPBPCI_01438 562983.HMPREF0433_01645 2.5e-15 88.6 Bacilli Bacteria 1W2BC@1239,2DF7W@1,2ZQU2@2,4HZFK@91061 NA|NA|NA IIAPBPCI_01439 1046629.Ssal_00208 6.8e-54 216.5 Firmicutes Bacteria 1TQ93@1239,COG3464@1,COG3464@2 NA|NA|NA L Transposase IIAPBPCI_01440 264199.stu0126 2.7e-31 141.4 Firmicutes Bacteria 1TQ93@1239,COG3464@1,COG3464@2 NA|NA|NA L Transposase IIAPBPCI_01441 264199.stu0824 3e-63 247.7 Bacilli tdcF 3.5.99.10 ko:K09022 R11098,R11099 RC03275,RC03354 ko00000,ko01000 Bacteria 1V6HG@1239,4HKEF@91061,COG0251@1,COG0251@2 NA|NA|NA J endoribonuclease L-PSP IIAPBPCI_01442 322159.STER_0869 4.4e-123 447.2 Bacilli queC 6.3.4.20 ko:K06920 ko00790,ko01100,map00790,map01100 R09978 RC00959 ko00000,ko00001,ko01000,ko03016 Bacteria 1TP4Z@1239,4HB1Y@91061,COG0603@1,COG0603@2 NA|NA|NA F Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) IIAPBPCI_01443 264199.stu0826 2.2e-81 308.1 Bacilli queD 4.1.2.50,4.2.3.12 ko:K01737 ko00790,ko01100,map00790,map01100 M00842,M00843 R04286,R09959 RC01117,RC02846,RC02847 ko00000,ko00001,ko00002,ko01000,ko03016 Bacteria 1V9HU@1239,4HJEX@91061,COG0720@1,COG0720@2 NA|NA|NA H synthase IIAPBPCI_01444 264199.stu0827 3.9e-133 480.7 Bacilli queE GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0008144,GO:0016829,GO:0016840,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0046872,GO:0046983,GO:0048037,GO:0050662,GO:0051536,GO:0051539,GO:0051540,GO:1901681,GO:1904047 1.97.1.4,4.3.99.3 ko:K04068,ko:K10026 ko00790,ko01100,map00790,map01100 R04710,R10002 RC02989 ko00000,ko00001,ko01000,ko03016 Bacteria 1TQ58@1239,4HAJ3@91061,COG0602@1,COG0602@2 NA|NA|NA H Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds IIAPBPCI_01445 264199.stu0828 2.5e-94 351.3 Bacilli queF GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0016651,GO:0016657,GO:0018130,GO:0019438,GO:0033739,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046116,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 1.7.1.13 ko:K06879,ko:K09457 ko00790,ko01100,map00790,map01100 R07605 RC01875 ko00000,ko00001,ko01000,ko03016 iSFV_1184.SFV_2663,iSF_1195.SF2807,iS_1188.S3002 Bacteria 1TPYC@1239,4HB14@91061,COG0780@1,COG0780@2 NA|NA|NA S Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily IIAPBPCI_01446 1116231.SMA_0321 6.5e-190 669.8 Bacilli Bacteria 1TP4C@1239,4HAXJ@91061,COG3328@1,COG3328@2 NA|NA|NA L Transposase IIAPBPCI_01447 264199.stu0851 2.6e-55 221.1 Bacteria hsdS 2.1.1.72,3.1.21.3 ko:K01154,ko:K07317 ko00000,ko01000,ko02048 Bacteria COG0732@1,COG0732@2 NA|NA|NA V type I restriction modification DNA specificity domain IIAPBPCI_01448 264199.stu0852 2.3e-93 348.2 Bacilli hsdM 2.1.1.72 ko:K03427 ko00000,ko01000,ko02048 Bacteria 1TPGZ@1239,4HA1J@91061,COG0286@1,COG0286@2 NA|NA|NA V type I restriction-modification system IIAPBPCI_01449 322159.STER_0891 1.4e-151 542.3 Bacilli glcU ko:K05340 ko00000,ko02000 2.A.7.5 Bacteria 1TQBN@1239,4HAVH@91061,COG4975@1,COG4975@2 NA|NA|NA U Glucose uptake IIAPBPCI_01450 322159.STER_0367 1.1e-220 772.3 Bacilli Bacteria 1TP4C@1239,4HAXJ@91061,COG3328@1,COG3328@2 NA|NA|NA L Transposase IIAPBPCI_01451 1046629.Ssal_00969 4.2e-18 96.7 Bacteria Bacteria COG1196@1,COG1196@2 NA|NA|NA D nuclear chromosome segregation IIAPBPCI_01452 322159.STER_0874 1.5e-135 488.8 Bacilli yejC Bacteria 1V46X@1239,4HI49@91061,COG4420@1,COG4420@2 NA|NA|NA S cyclic nucleotide-binding protein IIAPBPCI_01453 264199.stu0831 4.5e-163 580.5 Bacilli rapZ GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0034641,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363 ko:K06958 ko00000,ko03019 Bacteria 1TPS4@1239,4H9KM@91061,COG1660@1,COG1660@2 NA|NA|NA S Displays ATPase and GTPase activities IIAPBPCI_01454 322159.STER_0876 3.6e-182 644.0 Bacilli ybhK Bacteria 1TPNV@1239,4HA0Z@91061,COG0391@1,COG0391@2 NA|NA|NA S Required for morphogenesis under gluconeogenic growth conditions IIAPBPCI_01455 264199.stu0833 1.9e-161 575.1 Bacilli whiA GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0030312,GO:0043937,GO:0044464,GO:0050789,GO:0050793,GO:0065007,GO:0071944 ko:K09762 ko00000 Bacteria 1TP2X@1239,4HB4H@91061,COG1481@1,COG1481@2 NA|NA|NA K May be required for sporulation IIAPBPCI_01456 904306.HMPREF9192_1264 1.2e-103 382.5 Bacilli pepD ko:K08659 ko00000,ko01000,ko01002 Bacteria 1TQ0F@1239,4HC3G@91061,COG4690@1,COG4690@2 NA|NA|NA E Dipeptidase IIAPBPCI_01457 1046629.Ssal_00974 2.6e-44 184.5 Bacilli pepD ko:K08659 ko00000,ko01000,ko01002 Bacteria 1TQ0F@1239,4HC3G@91061,COG4690@1,COG4690@2 NA|NA|NA E Dipeptidase IIAPBPCI_01458 272623.L173469 1.5e-75 288.9 Lactococcus tspO ko:K05770 ko04080,ko04214,ko04979,ko05166,map04080,map04214,map04979,map05166 ko00000,ko00001,ko02000 9.A.24 Bacteria 1V896@1239,1YCDJ@1357,4HK1B@91061,COG3476@1,COG3476@2 NA|NA|NA T TspO/MBR family IIAPBPCI_01459 272623.L172704 2e-59 235.0 Lactococcus Bacteria 1W16R@1239,1YCF5@1357,2FHJA@1,349D7@2,4HYIT@91061 NA|NA|NA S Uncharacterised lipoprotein family IIAPBPCI_01460 1116231.SMA_0321 1.2e-180 639.0 Bacilli Bacteria 1TP4C@1239,4HAXJ@91061,COG3328@1,COG3328@2 NA|NA|NA L Transposase IIAPBPCI_01461 1069533.Sinf_0805 7.1e-28 129.4 Bacteria ko:K07483 ko00000 Bacteria COG2963@1,COG2963@2 NA|NA|NA L transposase activity IIAPBPCI_01463 997830.HMPREF1124_0825 6.4e-50 203.8 Streptococcus infantis Bacteria 1TWKB@1239,2BKU4@1,32FAD@2,43GHI@68892,4I5E1@91061 NA|NA|NA IIAPBPCI_01465 1123312.KB904580_gene880 2.1e-120 438.3 Bacilli ko:K07043 ko00000 Bacteria 1VCK6@1239,4HGVM@91061,COG1451@1,COG1451@2 NA|NA|NA S Protein of unknown function (DUF2786) IIAPBPCI_01467 1123315.AUIP01000012_gene1984 4.2e-278 963.4 Bacilli repE Bacteria 1UBUD@1239,4HB0A@91061,COG1959@1,COG1959@2 NA|NA|NA K Primase C terminal 1 (PriCT-1) IIAPBPCI_01469 1035189.HMPREF9954_1862 6.1e-15 86.3 Streptococcus infantis Bacteria 1TWN4@1239,2DJ09@1,304FH@2,43GM5@68892,4I5FY@91061 NA|NA|NA IIAPBPCI_01470 997830.HMPREF1124_0830 3.8e-40 171.0 Streptococcus infantis Bacteria 1TWJQ@1239,2DIZ5@1,304E3@2,43GFN@68892,4I5D8@91061 NA|NA|NA IIAPBPCI_01471 1035189.HMPREF9954_1860 4.6e-34 151.0 Streptococcus infantis Bacteria 1TWK7@1239,2DIZC@1,304ED@2,43GH6@68892,4I5DW@91061 NA|NA|NA S Thioredoxin IIAPBPCI_01472 997830.HMPREF1124_0832 1.2e-14 85.5 Streptococcus infantis Bacteria 1TWNW@1239,2DJ0H@1,304FT@2,43GN8@68892,4I5GQ@91061 NA|NA|NA IIAPBPCI_01475 1035189.HMPREF9954_1858 3.7e-89 335.1 Streptococcus infantis Bacteria 1W27X@1239,2DCHT@1,2ZE7E@2,43GGG@68892,4I25E@91061 NA|NA|NA IIAPBPCI_01478 997830.HMPREF1124_0837 3.6e-20 104.4 Streptococcus infantis Bacteria 1TWM0@1239,29P5X@1,30A42@2,43GJG@68892,4I5ET@91061 NA|NA|NA S the current gene model (or a revised gene model) may contain a frame shift IIAPBPCI_01479 1035189.HMPREF9954_1854 1.7e-36 158.7 Streptococcus infantis Bacteria 1TWKR@1239,2DIZJ@1,304EM@2,43GIX@68892,4I5EH@91061 NA|NA|NA S the current gene model (or a revised gene model) may contain a frame shift IIAPBPCI_01480 1123315.AUIP01000012_gene1974 6.7e-142 510.0 Bacilli ada 3.2.2.21 ko:K13529,ko:K15051 ko03410,map03410 ko00000,ko00001,ko01000,ko03000,ko03400 Bacteria 1TR37@1239,4HK7D@91061,COG2169@1,COG2169@2 NA|NA|NA F DNA/RNA non-specific endonuclease IIAPBPCI_01481 997830.HMPREF1124_0841 1.6e-39 169.1 Streptococcus infantis Bacteria 1TWM2@1239,2DIZQ@1,304EU@2,43GJQ@68892,4I5EW@91061 NA|NA|NA IIAPBPCI_01482 482234.SCAZ3_00255 0.0 1464.9 Bacilli ruvB 3.6.4.12 ko:K03551,ko:K07126 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Bacteria 1V0DS@1239,4HENV@91061,COG2255@1,COG2255@2 NA|NA|NA L four-way junction helicase activity IIAPBPCI_01483 1035189.HMPREF9954_1844 7.5e-18 96.3 Streptococcus infantis Bacteria 1TWMS@1239,2DJ03@1,304F9@2,43GKP@68892,4I5FI@91061 NA|NA|NA IIAPBPCI_01484 482234.SCAZ3_00265 0.0 3336.2 Bacilli Bacteria 1UICF@1239,4ISNE@91061,COG0358@1,COG0358@2,COG2856@1,COG2856@2 NA|NA|NA EL Toprim-like IIAPBPCI_01486 482234.SCAZ3_00275 0.0 1133.6 Bacilli topB 5.99.1.2 ko:K03169 ko00000,ko01000,ko03032 Bacteria 1TPJD@1239,4HBQF@91061,COG0550@1,COG0550@2 NA|NA|NA L Topoisomerase IA IIAPBPCI_01487 482234.SCAZ3_00280 0.0 1158.7 Bacilli clpB ko:K03694,ko:K03695,ko:K03696 ko01100,ko04213,map01100,map04213 ko00000,ko00001,ko03110 Bacteria 1TPMU@1239,4HACY@91061,COG0542@1,COG0542@2 NA|NA|NA O Belongs to the ClpA ClpB family IIAPBPCI_01488 1035189.HMPREF9954_1835 2.9e-33 147.9 Streptococcus infantis Bacteria 1TWKN@1239,2DIZG@1,304EJ@2,43GIM@68892,4I5EE@91061 NA|NA|NA IIAPBPCI_01489 1123311.KB904459_gene592 3.4e-197 694.1 Bacilli Bacteria 1W5ZH@1239,2DCJK@1,2ZEEP@2,4I1YG@91061 NA|NA|NA IIAPBPCI_01490 862969.SCI_0808 1.8e-30 139.8 Streptococcus anginosus group ko:K06236 ko04151,ko04510,ko04512,ko04611,ko04926,ko04933,ko04974,ko05146,ko05165,map04151,map04510,map04512,map04611,map04926,map04933,map04974,map05146,map05165 ko00000,ko00001,ko00536,ko04516 Bacteria 1UMUJ@1239,42EFA@671232,4IU0F@91061,COG3468@1,COG3468@2 NA|NA|NA MU outer membrane autotransporter barrel domain protein IIAPBPCI_01491 482234.SCAZ3_00305 0.0 2360.5 Bacteria Bacteria COG3087@1,COG3087@2 NA|NA|NA D Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides IIAPBPCI_01492 482234.SCAZ3_00310 1.2e-73 282.3 Bacteria ko:K03111 ko03030,ko03430,ko03440,map03030,map03430,map03440 ko00000,ko00001,ko03029,ko03032,ko03400 Bacteria COG0629@1,COG0629@2 NA|NA|NA L single-stranded DNA binding IIAPBPCI_01493 482234.SCAZ3_00315 1.6e-189 668.7 Bacilli nagZ 3.2.1.52 ko:K01207 ko00520,ko00531,ko01100,ko01501,map00520,map00531,map01100,map01501 M00628 R00022,R05963,R07809,R07810,R10831 RC00049 ko00000,ko00001,ko00002,ko01000 Bacteria 1TP63@1239,4HBDB@91061,COG1472@1,COG1472@2 NA|NA|NA G Belongs to the glycosyl hydrolase 3 family IIAPBPCI_01495 1035189.HMPREF9954_1825 1.9e-13 81.6 Streptococcus infantis Bacteria 1TWM4@1239,2DIZS@1,304EW@2,43GJS@68892,4I5EY@91061 NA|NA|NA IIAPBPCI_01496 482234.SCAZ3_00330 0.0 1947.9 Bacilli ko:K03205 ko03070,map03070 M00333 ko00000,ko00001,ko00002,ko02044 3.A.7 Bacteria 1TPCF@1239,4H9ZN@91061,COG3505@1,COG3505@2 NA|NA|NA U COG3505 Type IV secretory pathway, VirD4 components IIAPBPCI_01497 1035189.HMPREF9954_1823 2.8e-26 125.2 Streptococcus infantis Bacteria 1TWK4@1239,2DIZ9@1,304EA@2,43GGZ@68892,4I5DS@91061 NA|NA|NA IIAPBPCI_01498 1035189.HMPREF9954_1822 1.4e-218 766.1 Streptococcus infantis Bacteria 1TWJ4@1239,2DIYY@1,304DQ@2,43GE2@68892,4I5CM@91061 NA|NA|NA IIAPBPCI_01499 1035189.HMPREF9954_1821 7.5e-27 126.3 Streptococcus infantis Bacteria 1TWKS@1239,2DIZK@1,304EN@2,43GIZ@68892,4I5EI@91061 NA|NA|NA S BRCA1 C Terminus (BRCT) domain IIAPBPCI_01500 388919.SSA_0155 1.3e-13 82.4 Streptococcus sanguinis Bacteria 1UACV@1239,1WS5P@1305,2AR9W@1,31GJT@2,4IKR3@91061 NA|NA|NA S Uncharacterized protein pXO2-11 IIAPBPCI_01501 1035189.HMPREF9954_1819 3e-84 318.2 Streptococcus infantis Bacteria 1TWJ2@1239,2DIYX@1,304DP@2,43GDZ@68892,4I5CJ@91061 NA|NA|NA IIAPBPCI_01502 482234.SCAZ3_00360 0.0 1297.3 Bacilli trsE Bacteria 1W186@1239,4HA4T@91061,COG0433@1,COG0433@2 NA|NA|NA S COG0433 Predicted ATPase IIAPBPCI_01503 997830.HMPREF1124_0864 1.7e-22 111.7 Streptococcus infantis Bacteria 1TWNB@1239,2DKPM@1,30A8D@2,43GMF@68892,4I5G5@91061 NA|NA|NA IIAPBPCI_01504 1123311.KB904459_gene606 1.2e-231 808.9 Bacteria ko:K02395 ko00000,ko02035 Bacteria COG1705@1,COG1705@2 NA|NA|NA NU amidase activity IIAPBPCI_01505 1035189.HMPREF9954_1815 2.9e-57 228.4 Streptococcus infantis Bacteria 1TWJM@1239,2DIZ3@1,304E1@2,43GFK@68892,4I5D6@91061 NA|NA|NA IIAPBPCI_01506 482234.SCAZ3_00380 4e-150 537.3 Bacteria ko:K03496 ko00000,ko03036,ko04812 Bacteria COG1192@1,COG1192@2 NA|NA|NA D plasmid maintenance IIAPBPCI_01507 997830.HMPREF1124_0868 4.6e-18 97.1 Streptococcus infantis Bacteria 1TWMJ@1239,2DIZZ@1,304F3@2,43GKA@68892,4I5FB@91061 NA|NA|NA IIAPBPCI_01508 997830.HMPREF1124_0869 4e-28 131.0 Streptococcus infantis Bacteria 1W6YV@1239,2DIDU@1,302XM@2,43GNG@68892,4I5GY@91061 NA|NA|NA S Replication initiator protein A (RepA) N-terminus IIAPBPCI_01509 1035189.HMPREF9954_1812 5e-09 67.4 Streptococcus infantis Bacteria 1TWKX@1239,2DIZN@1,304EQ@2,43GJB@68892,4I5EP@91061 NA|NA|NA IIAPBPCI_01510 482234.SCAZ3_00400 3e-259 900.6 Bacilli Bacteria 1UZVH@1239,2BVJW@1,32QXP@2,4HFK6@91061 NA|NA|NA S Uncharacterised protein family (UPF0236) IIAPBPCI_01511 1046629.Ssal_00974 2.4e-57 228.0 Bacilli pepD ko:K08659 ko00000,ko01000,ko01002 Bacteria 1TQ0F@1239,4HC3G@91061,COG4690@1,COG4690@2 NA|NA|NA E Dipeptidase IIAPBPCI_01512 264199.stu0859 1.2e-86 325.9 Bacteria XK27_10720 Bacteria COG2339@1,COG2339@2 NA|NA|NA D peptidase activity IIAPBPCI_01513 264199.stu0860 3.6e-293 1013.4 Bacilli adcA GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006950,GO:0007154,GO:0008150,GO:0008270,GO:0009267,GO:0009605,GO:0009987,GO:0009991,GO:0010035,GO:0010038,GO:0030288,GO:0030313,GO:0031667,GO:0031668,GO:0031669,GO:0031975,GO:0033554,GO:0034224,GO:0042221,GO:0042594,GO:0042597,GO:0043167,GO:0043169,GO:0044424,GO:0044464,GO:0046686,GO:0046870,GO:0046872,GO:0046914,GO:0050896,GO:0051716,GO:0071496,GO:0120127 ko:K09815 ko02010,map02010 M00242 ko00000,ko00001,ko00002,ko02000 3.A.1.15.3,3.A.1.15.5 Bacteria 1TPG7@1239,4H9UN@91061,COG0803@1,COG0803@2,COG3443@1,COG3443@2 NA|NA|NA P Belongs to the bacterial solute-binding protein 9 family IIAPBPCI_01514 663952.SDD27957_05960 1.7e-08 65.9 Streptococcus dysgalactiae group Bacteria 1M9M6@119603,1TXBA@1239,2DJ70@1,304WJ@2,4I68X@91061 NA|NA|NA IIAPBPCI_01515 322159.STER_0898 1.5e-170 605.5 Firmicutes yeiH Bacteria 1TQYA@1239,COG2855@1,COG2855@2 NA|NA|NA S Membrane IIAPBPCI_01516 904306.HMPREF9192_1840 1.6e-118 432.2 Bacilli mur1 ko:K02395 ko00000,ko02035 Bacteria 1UYRM@1239,4HAU6@91061,COG1705@1,COG1705@2 NA|NA|NA NU muramidase IIAPBPCI_01517 264199.stu1454 4.2e-20 103.6 Bacteria ko:K07483 ko00000 Bacteria COG2963@1,COG2963@2 NA|NA|NA L transposase activity IIAPBPCI_01518 322159.STER_0901 4.5e-166 590.5 Bacilli cpsY Bacteria 1TP3E@1239,4HC5J@91061,COG0583@1,COG0583@2 NA|NA|NA K Transcriptional regulator IIAPBPCI_01519 322159.STER_0903 0.0 1166.0 Bacilli glmS GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016020,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0040007,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:0071944,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 ko:K00820 ko00250,ko00520,ko01100,ko01130,ko04931,map00250,map00520,map01100,map01130,map04931 R00768 RC00010,RC00163,RC02752 ko00000,ko00001,ko01000,ko01002 iNJ661.Rv3436c,iSB619.SA_RS11245,iYO844.BSU01780 Bacteria 1TPGU@1239,4H9R4@91061,COG0449@1,COG0449@2 NA|NA|NA M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source IIAPBPCI_01520 322159.STER_0904 6.1e-57 226.5 Bacilli phnA GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 ko:K06193 ko01120,map01120 ko00000 Bacteria 1V6NA@1239,4HIKN@91061,COG2824@1,COG2824@2 NA|NA|NA P Alkylphosphonate utilization operon protein PhnA IIAPBPCI_01521 264199.stu0875 5.3e-105 387.1 Bacilli artQ ko:K02029,ko:K02030,ko:K17073,ko:K17074 ko02010,map02010 M00236,M00589 ko00000,ko00001,ko00002,ko02000 3.A.1.3,3.A.1.3.20 Bacteria 1V280@1239,4HGMH@91061,COG0765@1,COG0765@2 NA|NA|NA P ABC transporter (Permease IIAPBPCI_01522 264199.stu0876 9.8e-112 409.5 Bacteria glnQ 3.6.3.21 ko:K02028 M00236 ko00000,ko00002,ko01000,ko02000 3.A.1.3 Bacteria COG1126@1,COG1126@2 NA|NA|NA E abc transporter atp-binding protein IIAPBPCI_01523 322159.STER_0907 1.2e-157 562.4 Firmicutes aatB ko:K02029,ko:K02030 M00236 ko00000,ko00002,ko02000 3.A.1.3 Bacteria 1TQNR@1239,COG0834@1,COG0834@2 NA|NA|NA ET ABC transporter substrate-binding protein IIAPBPCI_01524 904306.HMPREF9192_1830 2.1e-73 281.6 Bacilli uvrX 2.7.7.7 ko:K02346,ko:K03502,ko:K14161 ko00000,ko01000,ko03400 Bacteria 1TP42@1239,4HA1P@91061,COG0389@1,COG0389@2 NA|NA|NA L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII IIAPBPCI_01525 264199.stu0879 1.9e-110 405.2 Bacilli uvrX 2.7.7.7 ko:K02346,ko:K03502,ko:K14161 ko00000,ko01000,ko03400 Bacteria 1TP42@1239,4HA1P@91061,COG0389@1,COG0389@2 NA|NA|NA L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII IIAPBPCI_01526 435842.HMPREF0848_00769 2.1e-07 60.1 Firmicutes Bacteria 1VFJD@1239,2E660@1,330UP@2 NA|NA|NA IIAPBPCI_01527 264199.stu0880 6.6e-62 243.0 Bacilli adhP GO:0003674,GO:0003824,GO:0004022,GO:0005488,GO:0006081,GO:0006117,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008270,GO:0009056,GO:0009636,GO:0009987,GO:0010033,GO:0016491,GO:0016614,GO:0016616,GO:0033554,GO:0042221,GO:0042493,GO:0043167,GO:0043169,GO:0044237,GO:0044248,GO:0045471,GO:0046185,GO:0046187,GO:0046677,GO:0046872,GO:0046914,GO:0050896,GO:0051716,GO:0055114,GO:0071704,GO:0097305,GO:1901575,GO:1901700 1.1.1.1 ko:K00001,ko:K13953 ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220 R00623,R00754,R02124,R04805,R04880,R05233,R05234,R06917,R06927,R07105,R08281,R08306,R08310 RC00050,RC00087,RC00088,RC00099,RC00116,RC00649,RC01734,RC02273 ko00000,ko00001,ko01000 iECP_1309.ECP_1480 Bacteria 1TP5B@1239,4HA9Z@91061,COG1064@1,COG1064@2 NA|NA|NA C alcohol dehydrogenase IIAPBPCI_01528 904306.HMPREF9192_1827 6.1e-112 410.2 Bacilli adhP GO:0003674,GO:0003824,GO:0004022,GO:0005488,GO:0006081,GO:0006117,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008270,GO:0009056,GO:0009636,GO:0009987,GO:0010033,GO:0016491,GO:0016614,GO:0016616,GO:0033554,GO:0042221,GO:0042493,GO:0043167,GO:0043169,GO:0044237,GO:0044248,GO:0045471,GO:0046185,GO:0046187,GO:0046677,GO:0046872,GO:0046914,GO:0050896,GO:0051716,GO:0055114,GO:0071704,GO:0097305,GO:1901575,GO:1901700 1.1.1.1 ko:K13953 ko00010,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220 R00623,R00754,R02124,R04880,R05233,R05234,R06917,R06927,R07105,R08281,R08306,R08310 RC00050,RC00087,RC00088,RC00099,RC00116,RC00649,RC01734,RC02273 ko00000,ko00001,ko01000 iECP_1309.ECP_1480 Bacteria 1TP5B@1239,4HA9Z@91061,COG1064@1,COG1064@2 NA|NA|NA C alcohol dehydrogenase IIAPBPCI_01530 1116231.SMA_0980 3e-21 107.1 Bacilli Bacteria 1W1ET@1239,2DY2G@1,347TK@2,4HYVW@91061 NA|NA|NA IIAPBPCI_01531 264199.stu0884 0.0 1798.1 Bacilli res_1 3.1.21.5 ko:K01156 ko00000,ko01000,ko02048 Bacteria 1TRVK@1239,4HAVG@91061,COG3421@1,COG3421@2 NA|NA|NA S Type III restriction IIAPBPCI_01532 264199.stu0885 0.0 1233.8 Bacilli sthIM 2.1.1.72 ko:K07316 ko00000,ko01000,ko02048 Bacteria 1TR8A@1239,4HBP1@91061,COG2189@1,COG2189@2 NA|NA|NA L Adenine specific DNA methylase Mod IIAPBPCI_01533 264199.stu0886 3.9e-303 1046.6 Bacilli guaA GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0030312,GO:0034404,GO:0034641,GO:0034654,GO:0040007,GO:0042278,GO:0042451,GO:0042455,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.3.1.128,6.3.5.2 ko:K01951,ko:K03790 ko00230,ko00983,ko01100,map00230,map00983,map01100 M00050 R01230,R01231,R08244 RC00010,RC00204 ko00000,ko00001,ko00002,ko01000,ko01002,ko03009 iJN746.PP_1032,iLJ478.TM1820,iSF_1195.SF2553,iSFxv_1172.SFxv_2808,iS_1188.S2725,iYL1228.KPN_02833 Bacteria 1TPG8@1239,4HA7Q@91061,COG0518@1,COG0518@2,COG0519@1,COG0519@2 NA|NA|NA F Catalyzes the synthesis of GMP from XMP IIAPBPCI_01534 322159.STER_0913 2e-126 458.4 Bacilli gntR1 ko:K03710,ko:K11922 ko00000,ko03000 Bacteria 1UYBW@1239,4HDDG@91061,COG2188@1,COG2188@2 NA|NA|NA K transcriptional IIAPBPCI_01535 264199.stu0888 1.1e-53 215.7 Bacilli ylxM GO:0003674,GO:0008150,GO:0030234,GO:0030695,GO:0050790,GO:0060589,GO:0065007,GO:0065009,GO:0098772 ko:K09787 ko00000 Bacteria 1VEGP@1239,4HKK6@91061,COG2739@1,COG2739@2 NA|NA|NA S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein IIAPBPCI_01536 264199.stu0889 1.6e-272 944.9 Bacilli ffh GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0030312,GO:0040007,GO:0044464,GO:0071944 3.6.5.4 ko:K03106 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 ko00000,ko00001,ko00002,ko01000,ko02044 3.A.5.1,3.A.5.2,3.A.5.7,3.A.5.8,3.A.5.9 Bacteria 1TP06@1239,4H9T4@91061,COG0541@1,COG0541@2 NA|NA|NA U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY IIAPBPCI_01537 264199.stu0890 3.1e-87 327.8 Bacilli niaX GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K16788 ko00000,ko02000 2.A.88.5 Bacteria 1V4NF@1239,2A1RE@1,311D4@2,4HH6C@91061 NA|NA|NA IIAPBPCI_01538 264199.stu0891 6e-91 340.1 Bacilli niaR ko:K07105 ko00000 Bacteria 1V6EY@1239,4HGYB@91061,COG1827@1,COG1827@2 NA|NA|NA S small molecule binding protein (contains 3H domain) IIAPBPCI_01539 264199.stu0892 8.1e-128 463.0 Bacilli Bacteria 1V758@1239,4HIKZ@91061,COG1396@1,COG1396@2,COG2932@1,COG2932@2 NA|NA|NA K DNA-binding helix-turn-helix protein IIAPBPCI_01540 264199.stu0893 1.2e-157 562.4 Bacilli ylqF GO:0003674,GO:0003824,GO:0003924,GO:0008150,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0022613,GO:0042254,GO:0044085,GO:0071840 ko:K14540 ko00000,ko03009 Bacteria 1TQGK@1239,4HA4D@91061,COG1161@1,COG1161@2 NA|NA|NA S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity IIAPBPCI_01541 322159.STER_0920 5.9e-135 486.9 Bacilli rnhB GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 ko:K03470 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 Bacteria 1V1D6@1239,4HB7M@91061,COG0164@1,COG0164@2 NA|NA|NA L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids IIAPBPCI_01542 322159.STER_0921 4e-85 320.9 Firmicutes Bacteria 1TRQ7@1239,COG1940@1,COG1940@2 NA|NA|NA GK ROK family IIAPBPCI_01543 322159.STER_0921 1.6e-70 271.9 Firmicutes Bacteria 1TRQ7@1239,COG1940@1,COG1940@2 NA|NA|NA GK ROK family IIAPBPCI_01544 264199.stu0896 8.3e-159 566.2 Bacilli dprA GO:0007154,GO:0008150,GO:0009292,GO:0009294,GO:0009605,GO:0009987,GO:0009991,GO:0030420,GO:0031668,GO:0044764,GO:0050896,GO:0051704,GO:0051716,GO:0071496 ko:K04096 ko00000 Bacteria 1TPP7@1239,4HGWM@91061,COG0758@1,COG0758@2 NA|NA|NA LU DNA protecting protein DprA IIAPBPCI_01545 322159.STER_0923 0.0 1323.1 Bacilli topA 5.99.1.2 ko:K03168 ko00000,ko01000,ko03032,ko03400 Bacteria 1TPUS@1239,4HA6C@91061,COG0550@1,COG0550@2 NA|NA|NA L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone IIAPBPCI_01546 322159.STER_0924 3.6e-154 550.8 Bacilli Bacteria 1V2FW@1239,2DC01@1,2ZC51@2,4HG69@91061 NA|NA|NA S TraX protein IIAPBPCI_01547 322159.STER_0925 2.7e-120 438.0 Firmicutes Bacteria 1TQ0D@1239,COG0745@1,COG0745@2 NA|NA|NA KT Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain IIAPBPCI_01548 264199.stu0902 1.9e-248 864.8 Bacilli Bacteria 1TS1G@1239,4HEWT@91061,COG0642@1,COG2205@2 NA|NA|NA T PhoQ Sensor IIAPBPCI_01549 322159.STER_0927 9.6e-258 895.6 Bacilli trmFO GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 2.1.1.74 ko:K04094 ko00000,ko01000,ko03016,ko03036 Bacteria 1TP67@1239,4HB27@91061,COG1206@1,COG1206@2 NA|NA|NA J Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs IIAPBPCI_01550 264199.stu0905 6.5e-78 296.6 Bacilli XK27_05470 Bacteria 1TPDQ@1239,4HADW@91061,COG0620@1,COG0620@2 NA|NA|NA E Methionine synthase IIAPBPCI_01551 904306.HMPREF9192_1810 9.3e-36 155.6 Bacilli XK27_05470 Bacteria 1TPDQ@1239,4HADW@91061,COG0620@1,COG0620@2 NA|NA|NA E Methionine synthase IIAPBPCI_01552 264199.stu0906 1.7e-75 288.5 Firmicutes ndk GO:0003674,GO:0003824,GO:0004550,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006165,GO:0006220,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009132,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0019205,GO:0019637,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0046483,GO:0046939,GO:0055086,GO:0071704,GO:0072521,GO:0072527,GO:1901360,GO:1901564 2.7.4.6 ko:K00940 ko00230,ko00240,ko00983,ko01100,ko01110,ko01130,ko04016,map00230,map00240,map00983,map01100,map01110,map01130,map04016 M00049,M00050,M00052,M00053 R00124,R00139,R00156,R00330,R00570,R00722,R01137,R01857,R02093,R02326,R02331,R03530,R11894,R11895 RC00002 ko00000,ko00001,ko00002,ko01000,ko04131 Bacteria 1V44G@1239,COG0105@1,COG0105@2 NA|NA|NA F Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate IIAPBPCI_01553 322159.STER_0930 1.9e-46 191.4 Bacteria pspE ko:K03972 ko00000 Bacteria COG0607@1,COG0607@2 NA|NA|NA P Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS IIAPBPCI_01554 264199.stu0909 6.8e-51 206.5 Bacilli Bacteria 1TRQC@1239,4HD7P@91061,COG1028@1,COG1028@2 NA|NA|NA IQ Acetoin reductase IIAPBPCI_01555 1114965.Spaf_0915 2.6e-45 187.6 Bacilli Bacteria 1TRQC@1239,4HD7P@91061,COG1028@1,COG1028@2 NA|NA|NA IQ Acetoin reductase IIAPBPCI_01557 264199.stu0911 0.0 1176.8 Bacilli lepA ko:K03596 ko05134,map05134 ko00000,ko00001 Bacteria 1TP0G@1239,4HASA@91061,COG0481@1,COG0481@2 NA|NA|NA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner IIAPBPCI_01561 264199.stu0916 1.1e-53 215.7 Bacteria ko:K15773 ko00000,ko02048,ko03000 Bacteria COG1813@1,COG1813@2 NA|NA|NA K peptidyl-tyrosine sulfation IIAPBPCI_01562 264199.stu0917 1.6e-58 231.9 Bacilli Z012_04635 Bacteria 1UZI0@1239,4HC2C@91061,COG1396@1,COG1396@2 NA|NA|NA K Transcriptional activator, Rgg GadR MutR family IIAPBPCI_01563 322159.STER_0934 2e-55 221.5 Bacilli Z012_04635 Bacteria 1UZI0@1239,4HC2C@91061,COG1396@1,COG1396@2 NA|NA|NA K Transcriptional activator, Rgg GadR MutR family IIAPBPCI_01566 264199.stu0920 1.1e-212 745.7 Firmicutes pqqE Bacteria 1TR52@1239,COG0535@1,COG0535@2 NA|NA|NA C radical SAM domain protein IIAPBPCI_01567 264199.stu0921 3.9e-136 490.7 Bacteria speB 3.5.3.11 ko:K01480 ko00330,ko01100,map00330,map01100 M00133 R01157 RC00024,RC00329 ko00000,ko00001,ko00002,ko01000 Bacteria COG0010@1,COG0010@2 NA|NA|NA E hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines IIAPBPCI_01568 1121864.OMO_01537 6.6e-61 241.5 Bacteria ko:K08218 ko01501,map01501 M00628 ko00000,ko00001,ko00002,ko02000 2.A.1.25 Bacteria COG0477@1,COG2814@2 NA|NA|NA EGP Major facilitator Superfamily IIAPBPCI_01569 322159.STER_0940 0.0 1105.1 Bacilli alsS 2.2.1.6 ko:K01652 ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230 M00019,M00570 R00006,R00014,R00226,R03050,R04672,R04673,R08648 RC00027,RC00106,RC01192,RC02744,RC02893 ko00000,ko00001,ko00002,ko01000 Bacteria 1TQE8@1239,4HAV1@91061,COG0028@1,COG0028@2 NA|NA|NA EH Belongs to the TPP enzyme family IIAPBPCI_01570 435842.HMPREF0848_00743 5.9e-129 466.8 Bacilli budA GO:0003674,GO:0003824,GO:0016829,GO:0016830,GO:0016831,GO:0047605 4.1.1.5 ko:K01575 ko00650,ko00660,map00650,map00660 R02948 RC00812 ko00000,ko00001,ko01000 Bacteria 1V4AH@1239,4HJ98@91061,COG3527@1,COG3527@2 NA|NA|NA H Belongs to the alpha-acetolactate decarboxylase family IIAPBPCI_01571 322159.STER_0003 1.8e-234 818.1 Firmicutes ko:K07485 ko00000 Bacteria 1TQ93@1239,COG3464@1,COG3464@2 NA|NA|NA L Transposase IIAPBPCI_01572 1316408.HSISM1_519 8.2e-118 429.9 Bacilli ko:K02004 M00258 ko00000,ko00002,ko02000 3.A.1 Bacteria 1TPHU@1239,4HA2C@91061,COG0577@1,COG0577@2 NA|NA|NA V ABC transporter (Permease IIAPBPCI_01573 904306.HMPREF9192_1786 3.4e-113 414.5 Bacilli Bacteria 1TRQB@1239,4HAY3@91061,COG1028@1,COG1028@2 NA|NA|NA IQ Belongs to the short-chain dehydrogenases reductases (SDR) family IIAPBPCI_01574 888746.HMPREF9180_1259 1.6e-10 71.6 Bacilli Bacteria 1W4NX@1239,2DD3F@1,2ZGBB@2,4I0KR@91061 NA|NA|NA IIAPBPCI_01575 322159.STER_0946 1.2e-97 362.5 Bacilli Bacteria 1TSUJ@1239,4IPZN@91061,COG1309@1,COG1309@2 NA|NA|NA K Transcriptional regulator, TetR family IIAPBPCI_01576 264199.stu0932 1.3e-157 562.4 Bacilli czcD ko:K16264 ko00000,ko02000 2.A.4.1 Bacteria 1TR92@1239,4HBCQ@91061,COG1230@1,COG1230@2 NA|NA|NA P cation diffusion facilitator family transporter IIAPBPCI_01577 322159.STER_0948 2.3e-209 734.6 Bacilli hemH GO:0003674,GO:0003824,GO:0004325,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.99.1.1,4.99.1.9 ko:K01772 ko00860,ko01100,ko01110,map00860,map01100,map01110 M00121 R00310,R11329 RC01012 ko00000,ko00001,ko00002,ko01000 Bacteria 1TPKF@1239,4HAYG@91061,COG0276@1,COG0276@2 NA|NA|NA H Catalyzes the ferrous insertion into protoporphyrin IX IIAPBPCI_01578 322159.STER_0949 3.1e-195 687.6 Bacilli adhB 1.1.1.1,1.1.1.14 ko:K00001,ko:K00008 ko00010,ko00040,ko00051,ko00071,ko00350,ko00625,ko00626,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00040,map00051,map00071,map00350,map00625,map00626,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220 M00014 R00623,R00754,R00875,R01896,R02124,R04805,R04880,R05233,R05234,R06917,R06927,R07105,R08281,R08306,R08310 RC00050,RC00085,RC00087,RC00088,RC00099,RC00102,RC00116,RC00649,RC01734,RC02273 ko00000,ko00001,ko00002,ko01000 Bacteria 1TPIW@1239,4HB2G@91061,COG1063@1,COG1063@2 NA|NA|NA E Dehydrogenase IIAPBPCI_01579 1046629.Ssal_01058 2.3e-07 60.1 Bacilli ko:K06889 ko00000 Bacteria 1TPW7@1239,4HEFQ@91061,COG1073@1,COG1073@2 NA|NA|NA S Hydrolases of the alpha beta superfamily IIAPBPCI_01580 264199.stu0937 7.9e-17 92.0 Bacteria Bacteria COG4814@1,COG4814@2 NA|NA|NA S Alpha/beta hydrolase of unknown function (DUF915) IIAPBPCI_01581 264199.stu0938 1.2e-79 302.4 Bacteria Bacteria COG4814@1,COG4814@2 NA|NA|NA S Alpha/beta hydrolase of unknown function (DUF915) IIAPBPCI_01584 264199.stu0941 2.6e-143 514.6 Bacilli 2.4.2.3 ko:K00757 ko00240,ko00983,ko01100,map00240,map00983,map01100 R01876,R02484,R08229 RC00063 ko00000,ko00001,ko01000 Bacteria 1TQ71@1239,4HUI7@91061,COG2820@1,COG2820@2 NA|NA|NA F Phosphorylase superfamily IIAPBPCI_01585 322159.STER_0956 8.3e-119 433.0 Bacilli gph 3.1.3.18 ko:K01091 ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130 R01334 RC00017 ko00000,ko00001,ko01000 Bacteria 1TPPZ@1239,4IPIP@91061,COG0546@1,COG0546@2 NA|NA|NA S HAD hydrolase, family IA, variant 1 IIAPBPCI_01586 1046629.Ssal_01070 6.1e-18 96.7 Bacilli yclQ ko:K02016 ko02010,map02010 M00240 ko00000,ko00001,ko00002,ko02000 3.A.1.14 Bacteria 1UXCZ@1239,4HAMP@91061,COG4607@1,COG4607@2 NA|NA|NA P ABC-type enterochelin transport system, periplasmic component IIAPBPCI_01587 264199.stu0946 2.3e-19 102.1 Bacteria Bacteria COG0534@1,COG0534@2 NA|NA|NA V drug transmembrane transporter activity IIAPBPCI_01588 904306.HMPREF9192_1770 3.9e-15 86.7 Bacilli dinF Bacteria 1TNZN@1239,4HANM@91061,COG0534@1,COG0534@2 NA|NA|NA V Mate efflux family protein IIAPBPCI_01590 264199.stu0950 3e-309 1067.0 Bacilli FbpA ko:K12341 ko03070,map03070 ko00000,ko00001,ko02044 1.B.40.1.1 Bacteria 1TQ8A@1239,4H9UF@91061,COG1293@1,COG1293@2 NA|NA|NA K RNA-binding protein homologous to eukaryotic snRNP IIAPBPCI_01592 904306.HMPREF9192_1767 6.1e-81 307.0 Bacilli Bacteria 1V7WE@1239,2B4EH@1,31X62@2,4HJ8G@91061 NA|NA|NA S TraX protein IIAPBPCI_01593 264199.stu0953 6.5e-96 356.7 Bacilli thiJ 2.7.11.1,3.5.1.124 ko:K03152,ko:K05520,ko:K12132 ko00000,ko01000,ko01001,ko01002 Bacteria 1V3WB@1239,4HM36@91061,COG0693@1,COG0693@2 NA|NA|NA S DJ-1 family IIAPBPCI_01594 264199.stu0954 4.8e-148 530.4 Bacilli pyrK GO:0003674,GO:0003824,GO:0004152,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016627,GO:0016635,GO:0016645,GO:0016646,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042602,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046390,GO:0046483,GO:0052875,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 ko:K02823 ko00240,ko01100,map00240,map01100 ko00000,ko00001 iYO844.BSU15530 Bacteria 1TQ5D@1239,4HAU4@91061,COG0543@1,COG0543@2 NA|NA|NA C Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD( ) IIAPBPCI_01595 1046629.Ssal_01079 1.9e-175 621.7 Bacilli pyrD GO:0003674,GO:0003824,GO:0004152,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016627,GO:0016635,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019856,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046112,GO:0046390,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.3.1.14,1.3.98.1 ko:K00226,ko:K02823,ko:K17828 ko00240,ko01100,map00240,map01100 M00051 R01867,R01869 RC00051 ko00000,ko00001,ko00002,ko01000 iYO844.BSU15540 Bacteria 1TPFV@1239,4HA5H@91061,COG0167@1,COG0167@2 NA|NA|NA F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily IIAPBPCI_01596 264199.stu0967 9.1e-127 459.5 Bacilli pyrF GO:0003674,GO:0003824,GO:0004590,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0015949,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019856,GO:0034641,GO:0034654,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046112,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.23 ko:K01591 ko00240,ko01100,map00240,map01100 M00051 R00965 RC00409 ko00000,ko00001,ko00002,ko01000 iECO103_1326.ECO103_1444,iECSF_1327.ECSF_1264,iSFV_1184.SFV_1294,iSF_1195.SF1285,iSFxv_1172.SFxv_1457,iS_1188.S1368,ic_1306.c1750 Bacteria 1TPPH@1239,4HAJ2@91061,COG0284@1,COG0284@2 NA|NA|NA F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) IIAPBPCI_01597 322159.STER_0981 7.5e-112 409.8 Bacilli pyrE 2.4.2.10,4.1.1.23 ko:K00762,ko:K01591,ko:K13421 ko00240,ko00983,ko01100,map00240,map00983,map01100 M00051 R00965,R01870,R08231 RC00063,RC00409,RC00611 ko00000,ko00001,ko00002,ko01000 iYO844.BSU15560 Bacteria 1V1BZ@1239,4HFV7@91061,COG0461@1,COG0461@2 NA|NA|NA F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) IIAPBPCI_01598 435842.HMPREF0848_00691 1.2e-63 249.2 Bacilli nylA 3.5.1.4 ko:K01426 ko00330,ko00360,ko00380,ko00627,ko00643,ko01120,map00330,map00360,map00380,map00627,map00643,map01120 R02540,R03096,R03180,R03909,R05551,R05590 RC00010,RC00100,RC00950,RC01025 ko00000,ko00001,ko01000 Bacteria 1TPGJ@1239,4HBE7@91061,COG0154@1,COG0154@2 NA|NA|NA J Belongs to the amidase family IIAPBPCI_01599 322159.STER_0984 9.7e-264 915.6 Bacilli dtpT GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K03305 ko00000 2.A.17 Bacteria 1TP81@1239,4HAF2@91061,COG3104@1,COG3104@2 NA|NA|NA E transporter IIAPBPCI_01600 264199.stu0973 5.6e-104 384.0 Bacilli nylA 3.5.1.4 ko:K01426 ko00330,ko00360,ko00380,ko00627,ko00643,ko01120,map00330,map00360,map00380,map00627,map00643,map01120 R02540,R03096,R03180,R03909,R05551,R05590 RC00010,RC00100,RC00950,RC01025 ko00000,ko00001,ko01000 Bacteria 1TPGJ@1239,4HBE7@91061,COG0154@1,COG0154@2 NA|NA|NA J Belongs to the amidase family IIAPBPCI_01601 264199.stu0974 2.4e-61 241.5 Bacilli yckB ko:K02030,ko:K02424 ko02010,map02010 M00234,M00236 ko00000,ko00001,ko00002,ko02000,ko02035 3.A.1.3,3.A.1.3.10,3.A.1.3.14 Bacteria 1UHHG@1239,4H9NX@91061,COG0834@1,COG0834@2 NA|NA|NA ET Belongs to the bacterial solute-binding protein 3 family IIAPBPCI_01602 264199.stu0975 2.9e-58 231.1 Bacilli artJ_1 ko:K02030,ko:K09996,ko:K09997 ko02010,map02010 M00229,M00236 ko00000,ko00001,ko00002,ko02000 3.A.1.3,3.A.1.3.3 Bacteria 1UHHG@1239,4H9NX@91061,COG0834@1,COG0834@2 NA|NA|NA ET Belongs to the bacterial solute-binding protein 3 family IIAPBPCI_01603 699248.SRA_05851 5.5e-53 214.2 Bacilli yecS GO:0000099,GO:0000101,GO:0003333,GO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0006791,GO:0006810,GO:0006811,GO:0006820,GO:0006865,GO:0008150,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015179,GO:0015184,GO:0015318,GO:0015711,GO:0015804,GO:0015807,GO:0015811,GO:0015849,GO:0016020,GO:0022857,GO:0034220,GO:0044464,GO:0046942,GO:0046943,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0072337,GO:0072348,GO:0072349,GO:0098656,GO:1901682,GO:1902475,GO:1903825,GO:1905039 ko:K10009 ko02010,map02010 M00234 ko00000,ko00001,ko00002,ko02000 3.A.1.3.10,3.A.1.3.14 iJN746.PP_0226 Bacteria 1TQ43@1239,4HCZV@91061,COG0765@1,COG0765@2 NA|NA|NA P ABC transporter (Permease IIAPBPCI_01605 1046629.Ssal_01083 2.6e-23 114.4 Bacilli sasH 3.1.3.5,3.6.1.45 ko:K11751 ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110 R00183,R00511,R00963,R01126,R01227,R01569,R01664,R01968,R02088,R02102,R02323,R02719,R03346 RC00017 ko00000,ko00001,ko01000 Bacteria 1TPV2@1239,4H9VJ@91061,COG0737@1,COG0737@2 NA|NA|NA F Belongs to the 5'-nucleotidase family IIAPBPCI_01606 264199.stu0981 2.5e-63 248.1 Bacteria yfiF3 Bacteria COG4977@1,COG4977@2 NA|NA|NA K sequence-specific DNA binding IIAPBPCI_01607 1046629.Ssal_01085 5.5e-24 116.3 Bacilli bglC Bacteria 1UZG6@1239,4HCQS@91061,COG2207@1,COG2207@2 NA|NA|NA K Transcriptional regulator IIAPBPCI_01608 322159.STER_0992 8.6e-246 855.9 Bacilli mnmE GO:0003674,GO:0005488,GO:0005515,GO:0042802 ko:K03650 R08701 RC00053,RC00209,RC00870 ko00000,ko01000,ko03016 Bacteria 1TPJF@1239,4HA06@91061,COG0486@1,COG0486@2 NA|NA|NA S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 IIAPBPCI_01609 322159.STER_0993 4e-240 837.0 Bacilli agcS GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K03310 ko00000 2.A.25 Bacteria 1TNZP@1239,4H9SZ@91061,COG1115@1,COG1115@2 NA|NA|NA E (Alanine) symporter IIAPBPCI_01610 322159.STER_0994 0.0 1385.5 Bacilli pcrA 3.6.4.12 ko:K03657 ko03420,ko03430,map03420,map03430 ko00000,ko00001,ko01000,ko03400 Bacteria 1TPSU@1239,4HB12@91061,COG0210@1,COG0210@2 NA|NA|NA L ATP-dependent DNA helicase IIAPBPCI_01611 322159.STER_0995 2.3e-240 837.8 Bacilli metY 2.5.1.49 ko:K01740 ko00270,ko01100,map00270,map01100 R01287,R04859 RC00020,RC02821,RC02848 ko00000,ko00001,ko01000 Bacteria 1VYCY@1239,4H9X5@91061,COG2873@1,COG2873@2 NA|NA|NA E o-acetylhomoserine IIAPBPCI_01612 904306.HMPREF9192_1752 3.2e-133 481.1 Bacilli Bacteria 1TQTU@1239,4HEHK@91061,COG0561@1,COG0561@2 NA|NA|NA S haloacid dehalogenase-like hydrolase IIAPBPCI_01613 264199.stu0990 3.8e-87 327.4 Bacilli tpx GO:0003674,GO:0003824,GO:0004601,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008379,GO:0009405,GO:0009605,GO:0009607,GO:0009636,GO:0009987,GO:0015036,GO:0016209,GO:0016491,GO:0016667,GO:0016671,GO:0016684,GO:0019725,GO:0020012,GO:0030312,GO:0030682,GO:0032843,GO:0033554,GO:0034599,GO:0042221,GO:0042592,GO:0043207,GO:0044403,GO:0044413,GO:0044415,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0045454,GO:0050789,GO:0050794,GO:0050896,GO:0051409,GO:0051701,GO:0051704,GO:0051707,GO:0051716,GO:0051805,GO:0051807,GO:0051832,GO:0051834,GO:0051920,GO:0052060,GO:0052173,GO:0052200,GO:0052376,GO:0052551,GO:0052564,GO:0052565,GO:0052572,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0071944,GO:0075136,GO:0097237,GO:0098754,GO:0098869,GO:1990748 1.11.1.15 ko:K11065 ko00000,ko01000 Bacteria 1V474@1239,4HFMW@91061,COG2077@1,COG2077@2 NA|NA|NA O Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides IIAPBPCI_01614 264199.stu0991 1.1e-110 406.0 Bacilli hsdS2 2.1.1.72 ko:K03427 ko00000,ko01000,ko02048 Bacteria 1VQES@1239,4HE4K@91061,COG0732@1,COG0732@2 NA|NA|NA V Type I restriction modification DNA specificity domain IIAPBPCI_01615 435842.HMPREF0848_00681 5.7e-33 146.4 Bacteria M1-755 ko:K09155 ko00000 Bacteria COG2461@1,COG2461@2 NA|NA|NA P Hemerythrin HHE cation binding domain protein IIAPBPCI_01616 264199.stu0993 2.4e-77 295.0 Bacilli XK27_04775 ko:K09155 ko00000 Bacteria 1TRD5@1239,4HAAW@91061,COG2461@1,COG2461@2 NA|NA|NA S hemerythrin HHE cation binding domain IIAPBPCI_01617 904306.HMPREF9192_1747 3.1e-69 268.1 Bacilli XK27_04775 ko:K09155 ko00000 Bacteria 1TRD5@1239,4HAAW@91061,COG2461@1,COG2461@2 NA|NA|NA S hemerythrin HHE cation binding domain IIAPBPCI_01618 904306.HMPREF9192_1747 4.4e-49 200.3 Bacilli XK27_04775 ko:K09155 ko00000 Bacteria 1TRD5@1239,4HAAW@91061,COG2461@1,COG2461@2 NA|NA|NA S hemerythrin HHE cation binding domain IIAPBPCI_01619 264199.stu0995 8.4e-151 539.7 Bacilli truB GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1990481 5.4.99.25 ko:K03177,ko:K03483 ko00000,ko01000,ko03000,ko03016 iSB619.SA_RS06305 Bacteria 1TP9Y@1239,4HA9X@91061,COG0130@1,COG0130@2 NA|NA|NA J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs IIAPBPCI_01620 264199.stu0996 5.5e-172 610.1 Bacilli ribF 2.7.1.26,2.7.7.2 ko:K11753 ko00740,ko01100,ko01110,map00740,map01100,map01110 M00125 R00161,R00549 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 iSB619.SA_RS06310 Bacteria 1TPKS@1239,4H9KE@91061,COG0196@1,COG0196@2 NA|NA|NA H Belongs to the ribF family IIAPBPCI_01621 264199.stu0997 5.7e-68 263.5 Bacilli spxA 1.20.4.1 ko:K00537,ko:K16509 ko00000,ko01000 Bacteria 1V3QC@1239,4HH0I@91061,COG1393@1,COG1393@2 NA|NA|NA K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress IIAPBPCI_01622 264199.stu0998 6.7e-44 183.0 Bacilli yktA ko:K16509 ko00000 Bacteria 1VEK8@1239,4HNKR@91061,COG4476@1,COG4476@2 NA|NA|NA S Belongs to the UPF0223 family IIAPBPCI_01623 322159.STER_1004 4.2e-141 507.3 Bacilli suhB 3.1.3.25 ko:K01092 ko00521,ko00562,ko01100,ko04070,map00521,map00562,map01100,map04070 M00131 R01185,R01186,R01187 RC00078 ko00000,ko00001,ko00002,ko01000 Bacteria 1TR4E@1239,4HB92@91061,COG0483@1,COG0483@2 NA|NA|NA G Belongs to the inositol monophosphatase superfamily IIAPBPCI_01624 322159.STER_1005 3e-256 890.6 Bacilli rsmF GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008173,GO:0008649,GO:0008757,GO:0009383,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.176,2.1.1.178 ko:K03500,ko:K11392 ko00000,ko01000,ko03009 Bacteria 1TPGQ@1239,4HCHQ@91061,COG0144@1,COG0144@2,COG3270@1,COG3270@2 NA|NA|NA J NOL1 NOP2 sun family protein IIAPBPCI_01625 322159.STER_1006 1.4e-156 558.9 Bacilli pstS GO:0003674,GO:0005488,GO:0006810,GO:0006811,GO:0006817,GO:0006820,GO:0008150,GO:0015698,GO:0042301,GO:0043167,GO:0043168,GO:0051179,GO:0051234 ko:K02040 ko02010,ko02020,ko05152,map02010,map02020,map05152 M00222 ko00000,ko00001,ko00002,ko02000 3.A.1.7 Bacteria 1TQ5X@1239,4HBEB@91061,COG0226@1,COG0226@2 NA|NA|NA P phosphate IIAPBPCI_01626 264199.stu1002 2.5e-156 558.1 Bacilli pstC GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K02037 ko02010,map02010 M00222 ko00000,ko00001,ko00002,ko02000 3.A.1.7 Bacteria 1TSPP@1239,4HC9H@91061,COG0573@1,COG0573@2 NA|NA|NA P probably responsible for the translocation of the substrate across the membrane IIAPBPCI_01627 322159.STER_1008 1.5e-155 555.4 Bacilli pstA GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K02038 ko02010,map02010 M00222 ko00000,ko00001,ko00002,ko02000 3.A.1.7 Bacteria 1TP74@1239,4HAKF@91061,COG0581@1,COG0581@2 NA|NA|NA P phosphate transport system permease IIAPBPCI_01628 322159.STER_1009 1e-150 539.3 Bacilli pstB 3.6.3.27 ko:K02036 ko02010,map02010 M00222 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.7 iLJ478.TM1261 Bacteria 1TP1M@1239,4HAB1@91061,COG1117@1,COG1117@2 NA|NA|NA P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system IIAPBPCI_01629 322159.STER_1010 2.3e-139 501.5 Bacilli pstB 3.6.3.27 ko:K02036 ko02010,map02010 M00222 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.7 iLJ478.TM1261 Bacteria 1TP1M@1239,4HAB1@91061,COG1117@1,COG1117@2 NA|NA|NA P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system IIAPBPCI_01630 322159.STER_1011 1.9e-113 415.2 Bacilli phoU ko:K02039 ko00000 Bacteria 1URN3@1239,4HEU9@91061,COG0704@1,COG0704@2 NA|NA|NA P Plays a role in the regulation of phosphate uptake IIAPBPCI_01631 264199.stu1007 0.0 1678.7 Bacilli pepN GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 3.4.11.2 ko:K01256,ko:K08776 ko00480,ko01100,map00480,map01100 R00899,R04951 RC00096,RC00141 ko00000,ko00001,ko01000,ko01002 Bacteria 1TR43@1239,4HA20@91061,COG0308@1,COG0308@2 NA|NA|NA E aminopeptidase IIAPBPCI_01632 322159.STER_1013 1e-193 682.6 Bacilli xerS GO:0000150,GO:0003674,GO:0003824,GO:0006139,GO:0006259,GO:0006310,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008907,GO:0009009,GO:0009037,GO:0009987,GO:0015074,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0140097,GO:1901360 Bacteria 1URNQ@1239,4HEPI@91061,COG4974@1,COG4974@2 NA|NA|NA D Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. Essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division IIAPBPCI_01633 322159.STER_1014 4.2e-186 657.1 Bacilli lplA 6.3.1.20 ko:K03800 ko00785,ko01100,map00785,map01100 R07770,R07771,R11143 RC00043,RC00070,RC00090,RC00992,RC02896 ko00000,ko00001,ko01000 Bacteria 1TQ5U@1239,4H9P6@91061,COG0095@1,COG0095@2 NA|NA|NA H Lipoate-protein ligase IIAPBPCI_01636 888816.HMPREF9389_1786 3.7e-09 68.2 Streptococcus sanguinis Bacteria 1UA7P@1239,1WRVC@1305,2AQRJ@1,31FZC@2,4IKIV@91061 NA|NA|NA IIAPBPCI_01637 322159.STER_1016 0.0 1497.3 Bacilli glgP 2.4.1.1 ko:K00688 ko00500,ko01100,ko01110,ko02026,ko04217,ko04910,ko04922,ko04931,map00500,map01100,map01110,map02026,map04217,map04910,map04922,map04931 R02111 ko00000,ko00001,ko01000 GT35 Bacteria 1TQAJ@1239,4H9XI@91061,COG0058@1,COG0058@2 NA|NA|NA G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties IIAPBPCI_01638 264199.stu1013 1.1e-302 1045.0 Bacilli malQ 2.4.1.25 ko:K00705 ko00500,ko01100,map00500,map01100 R05196 RC00049 ko00000,ko00001,ko01000 GH77 Bacteria 1W5VQ@1239,4HCHB@91061,COG1640@1,COG1640@2 NA|NA|NA G 4-alpha-glucanotransferase IIAPBPCI_01639 264199.stu1014 1.2e-62 245.7 Bacilli malR ko:K02529 ko00000,ko03000 Bacteria 1TPZM@1239,4H9ZT@91061,COG1609@1,COG1609@2 NA|NA|NA K Transcriptional regulator IIAPBPCI_01640 264199.stu1014 3.7e-46 190.7 Bacilli malR ko:K02529 ko00000,ko03000 Bacteria 1TPZM@1239,4H9ZT@91061,COG1609@1,COG1609@2 NA|NA|NA K Transcriptional regulator IIAPBPCI_01641 1046629.Ssal_01117 4.2e-17 93.2 Bacilli malX ko:K02027,ko:K15770 ko02010,map02010 M00207,M00491 ko00000,ko00001,ko00002,ko02000 3.A.1.1,3.A.1.1.16,3.A.1.1.2 Bacteria 1TPU9@1239,4H9TU@91061,COG2182@1,COG2182@2 NA|NA|NA G ABC transporter IIAPBPCI_01642 1046629.Ssal_01117 9.1e-168 596.3 Bacilli malX ko:K02027,ko:K15770 ko02010,map02010 M00207,M00491 ko00000,ko00001,ko00002,ko02000 3.A.1.1,3.A.1.1.16,3.A.1.1.2 Bacteria 1TPU9@1239,4H9TU@91061,COG2182@1,COG2182@2 NA|NA|NA G ABC transporter IIAPBPCI_01643 904306.HMPREF9192_1726 1.1e-202 712.6 Bacilli malF ko:K02025,ko:K02026,ko:K15771 ko02010,map02010 M00207,M00491 ko00000,ko00001,ko00002,ko02000 3.A.1.1,3.A.1.1.16,3.A.1.1.2 Bacteria 1TR2A@1239,4HB8H@91061,COG1175@1,COG1175@2 NA|NA|NA P ABC transporter (Permease IIAPBPCI_01644 264199.stu0129 2.8e-48 197.6 Bacteria Bacteria COG3464@1,COG3464@2 NA|NA|NA IIAPBPCI_01645 264199.stu1444 1.2e-157 562.4 Firmicutes Bacteria 1TQ93@1239,COG3464@1,COG3464@2 NA|NA|NA L Transposase IIAPBPCI_01646 264199.stu1020 4.6e-25 119.8 Bacteria tatA GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0016020,GO:0044424,GO:0044444,GO:0044464,GO:0071944 ko:K03116,ko:K03117 ko03060,ko03070,map03060,map03070 M00336 ko00000,ko00001,ko00002,ko02044 2.A.64 Bacteria COG1826@1,COG1826@2 NA|NA|NA U protein secretion IIAPBPCI_01647 322159.STER_1021 4.4e-121 440.7 Bacilli tatC GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009977,GO:0015031,GO:0015291,GO:0015399,GO:0015405,GO:0015450,GO:0015833,GO:0016020,GO:0022804,GO:0022857,GO:0022884,GO:0032991,GO:0033036,GO:0033281,GO:0034613,GO:0042886,GO:0042887,GO:0043953,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0065002,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0098796,GO:0098797,GO:1904680 ko:K03118 ko03060,ko03070,map03060,map03070 M00336 ko00000,ko00001,ko00002,ko02044 2.A.64 Bacteria 1U7N7@1239,4HB1U@91061,COG0805@1,COG0805@2 NA|NA|NA U Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes IIAPBPCI_01648 322159.STER_1022 3e-301 1040.4 Bacilli ywbL ko:K07243 ko00000,ko02000 2.A.108.1,2.A.108.2 Bacteria 1TQIA@1239,4HCJZ@91061,COG0672@1,COG0672@2 NA|NA|NA P COG0672 High-affinity Fe2 Pb2 permease IIAPBPCI_01649 322159.STER_1023 5.6e-233 813.1 Bacilli ycdB ko:K16301 ko00000,ko01000,ko02000 2.A.108.2.3 Bacteria 1UY9Y@1239,4HACQ@91061,COG2837@1,COG2837@2 NA|NA|NA P peroxidase IIAPBPCI_01650 322159.STER_1024 3.2e-153 547.7 Bacilli ycdO GO:0000041,GO:0006810,GO:0006811,GO:0006812,GO:0006826,GO:0008150,GO:0015684,GO:0030001,GO:0051179,GO:0051234,GO:0070838,GO:0072511 ko:K07224,ko:K07243 ko00000,ko02000 2.A.108.1,2.A.108.2,2.A.108.2.3 Bacteria 1TS89@1239,4HB0W@91061,COG2822@1,COG2822@2 NA|NA|NA P periplasmic lipoprotein involved in iron transport IIAPBPCI_01651 1046629.Ssal_01131 1.2e-33 149.1 Bacilli pulA 3.2.1.1,3.2.1.41 ko:K01176,ko:K01200 ko00500,ko01100,ko01110,ko04973,map00500,map01100,map01110,map04973 R02108,R02111,R02112,R11262 ko00000,ko00001,ko01000 CBM48,GH13 Bacteria 1TP3M@1239,4HBP5@91061,COG1523@1,COG1523@2 NA|NA|NA G belongs to the glycosyl hydrolase 13 family IIAPBPCI_01652 264199.stu1031 3.7e-85 320.9 Bacilli pulA 3.2.1.1,3.2.1.41 ko:K01176,ko:K01200 ko00500,ko01100,ko01110,ko04973,map00500,map01100,map01110,map04973 R02108,R02111,R02112,R11262 ko00000,ko00001,ko01000 CBM48,GH13 Bacteria 1TP3M@1239,4HBP5@91061,COG1523@1,COG1523@2 NA|NA|NA G belongs to the glycosyl hydrolase 13 family IIAPBPCI_01653 1046629.Ssal_01131 1.7e-60 238.4 Bacilli pulA 3.2.1.1,3.2.1.41 ko:K01176,ko:K01200 ko00500,ko01100,ko01110,ko04973,map00500,map01100,map01110,map04973 R02108,R02111,R02112,R11262 ko00000,ko00001,ko01000 CBM48,GH13 Bacteria 1TP3M@1239,4HBP5@91061,COG1523@1,COG1523@2 NA|NA|NA G belongs to the glycosyl hydrolase 13 family IIAPBPCI_01654 264199.stu1033 7.6e-66 256.5 Bacilli pulA 3.2.1.1,3.2.1.41 ko:K01176,ko:K01200 ko00500,ko01100,ko01110,ko04973,map00500,map01100,map01110,map04973 R02108,R02111,R02112,R11262 ko00000,ko00001,ko01000 CBM48,GH13 Bacteria 1TP3M@1239,4HBP5@91061,COG1523@1,COG1523@2 NA|NA|NA G belongs to the glycosyl hydrolase 13 family IIAPBPCI_01655 1046629.Ssal_01131 1.5e-133 482.3 Bacilli pulA 3.2.1.1,3.2.1.41 ko:K01176,ko:K01200 ko00500,ko01100,ko01110,ko04973,map00500,map01100,map01110,map04973 R02108,R02111,R02112,R11262 ko00000,ko00001,ko01000 CBM48,GH13 Bacteria 1TP3M@1239,4HBP5@91061,COG1523@1,COG1523@2 NA|NA|NA G belongs to the glycosyl hydrolase 13 family IIAPBPCI_01656 322159.STER_1030 1.6e-185 655.2 Bacilli 3.5.1.28 ko:K01448,ko:K07273 ko01503,map01503 M00727 R04112 RC00064,RC00141 ko00000,ko00001,ko00002,ko01000,ko01011,ko03036 Bacteria 1W25V@1239,4HGXW@91061,COG0860@1,COG0860@2 NA|NA|NA M GBS Bsp-like repeat IIAPBPCI_01657 264199.stu1046 1.9e-65 255.0 Bacteria 3.2.1.17 ko:K01185,ko:K07273 ko00000,ko01000 Bacteria COG3757@1,COG3757@2 NA|NA|NA M lysozyme activity IIAPBPCI_01658 904306.HMPREF9192_1715 9.9e-12 75.9 Bacteria 3.5.1.28 ko:K01448,ko:K02395,ko:K21471 ko01503,map01503 M00727 R04112 RC00064,RC00141 ko00000,ko00001,ko00002,ko01000,ko01002,ko01011,ko02035,ko03036 Bacteria COG0860@1,COG0860@2,COG1705@1,COG1705@2,COG3757@1,COG3757@2,COG5263@1,COG5263@2 NA|NA|NA NU amidase activity IIAPBPCI_01659 322159.STER_1033 0.0 1106.7 Bacilli lpdA 1.8.1.4 ko:K00382 ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00036,M00307,M00532 R00209,R01221,R01698,R03815,R07618,R08549 RC00004,RC00022,RC00583,RC02742,RC02833,RC02834 br01601,ko00000,ko00001,ko00002,ko01000,ko04147 Bacteria 1TP1W@1239,4H9Z5@91061,COG1249@1,COG1249@2 NA|NA|NA C Dehydrogenase IIAPBPCI_01660 264199.stu1049 1.3e-198 699.1 Bacilli acoC 2.3.1.12 ko:K00627 ko00010,ko00020,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map01100,map01110,map01120,map01130,map01200 M00307 R00209,R02569 RC00004,RC02742,RC02857 br01601,ko00000,ko00001,ko00002,ko01000 Bacteria 1TR5N@1239,4HDFT@91061,COG0508@1,COG0508@2 NA|NA|NA C Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex IIAPBPCI_01661 264199.stu1050 3.7e-182 644.0 Bacilli acoB 1.2.4.1,1.2.4.4 ko:K00162,ko:K11381,ko:K21417 ko00010,ko00020,ko00280,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00280,map00620,map00640,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230 M00036,M00307 R00014,R00209,R01699,R03270,R07599,R07600,R07601,R07602,R07603,R07604,R10996,R10997 RC00004,RC00027,RC00627,RC02742,RC02743,RC02744,RC02882,RC02883,RC02949,RC02953 br01601,ko00000,ko00001,ko00002,ko01000 Bacteria 1TP3J@1239,4HAP6@91061,COG0022@1,COG0022@2 NA|NA|NA C COG0022 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit IIAPBPCI_01662 322159.STER_1036 1.7e-184 651.7 Bacilli acoA 1.2.4.1,1.2.4.4 ko:K00161,ko:K11381,ko:K21416 ko00010,ko00020,ko00280,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,ko04066,ko04922,ko05230,map00010,map00020,map00280,map00620,map00640,map01100,map01110,map01120,map01130,map01200,map04066,map04922,map05230 M00036,M00307 R00014,R00209,R01699,R03270,R07599,R07600,R07601,R07602,R07603,R07604,R10996,R10997 RC00004,RC00027,RC00627,RC02742,RC02743,RC02744,RC02882,RC02883,RC02949,RC02953 br01601,ko00000,ko00001,ko00002,ko01000 Bacteria 1TQDG@1239,4HBEA@91061,COG1071@1,COG1071@2 NA|NA|NA C Dehydrogenase E1 component IIAPBPCI_01663 1046629.Ssal_01151 0.0 1139.4 Bacilli Bacteria 1TS3Q@1239,4HF7D@91061,COG4907@1,COG4907@2 NA|NA|NA S the current gene model (or a revised gene model) may contain a frame shift IIAPBPCI_01664 264199.stu1054 1.8e-234 818.1 Bacilli pyrC GO:0003674,GO:0003824,GO:0004038,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006144,GO:0006145,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009112,GO:0009987,GO:0016787,GO:0016810,GO:0016812,GO:0019439,GO:0034641,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044424,GO:0044464,GO:0046113,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575 3.5.2.3 ko:K01465 ko00240,ko01100,map00240,map01100 M00051 R01993 RC00632 ko00000,ko00001,ko00002,ko01000 Bacteria 1TPQM@1239,4HA90@91061,COG0044@1,COG0044@2 NA|NA|NA F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily IIAPBPCI_01665 322159.STER_1041 2.2e-127 461.5 Firmicutes ung GO:0003674,GO:0003824,GO:0004844,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006285,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097506,GO:0097510,GO:0140097,GO:1901360 3.2.2.27 ko:K03648 ko03410,ko05340,map03410,map05340 ko00000,ko00001,ko01000,ko03400 Bacteria 1TPSN@1239,COG0692@1,COG0692@2 NA|NA|NA L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine IIAPBPCI_01666 322159.STER_1042 1.6e-216 758.4 Bacilli yeaB Bacteria 1TSGY@1239,4H9WP@91061,COG0053@1,COG0053@2,COG4994@1,COG4994@2 NA|NA|NA K Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family IIAPBPCI_01667 264199.stu1058 2.9e-21 107.1 Bacteria dacA1 3.4.16.4 ko:K01286,ko:K07258 ko00550,ko01100,map00550,map01100 ko00000,ko00001,ko01000,ko01002,ko01011 Bacteria COG1686@1,COG1686@2 NA|NA|NA M Belongs to the peptidase S11 family IIAPBPCI_01668 264199.stu1059 3.9e-24 116.7 Bacilli 3.4.16.4 ko:K01286 ko00000,ko01000 Bacteria 1TQN0@1239,4HD0P@91061,COG1686@1,COG1686@2 NA|NA|NA M Belongs to the peptidase S11 family IIAPBPCI_01669 264199.stu1059 4.1e-127 460.7 Bacilli 3.4.16.4 ko:K01286 ko00000,ko01000 Bacteria 1TQN0@1239,4HD0P@91061,COG1686@1,COG1686@2 NA|NA|NA M Belongs to the peptidase S11 family IIAPBPCI_01670 322159.STER_1044 1.2e-157 562.4 Bacilli rssA Bacteria 1TQ9W@1239,4HCHJ@91061,COG4667@1,COG4667@2 NA|NA|NA S Phospholipase, patatin family IIAPBPCI_01671 322159.STER_1045 1.8e-69 268.5 Bacilli estA Bacteria 1V1B9@1239,4HGED@91061,COG2755@1,COG2755@2 NA|NA|NA E GDSL-like protein IIAPBPCI_01672 904306.HMPREF9192_1701 3.4e-29 133.7 Bacilli estA Bacteria 1VHUN@1239,4IPN1@91061,COG2755@1,COG2755@2 NA|NA|NA E Lysophospholipase L1 and related esterases IIAPBPCI_01673 322159.STER_1047 7e-292 1009.2 Bacilli ko:K03688 ko00000 Bacteria 1TPIV@1239,4HBW3@91061,COG0661@1,COG0661@2 NA|NA|NA S unusual protein kinase IIAPBPCI_01674 322159.STER_1048 4.9e-39 166.8 Bacilli Bacteria 1VK6K@1239,4HRS5@91061,COG3937@1,COG3937@2 NA|NA|NA S granule-associated protein IIAPBPCI_01675 1046629.Ssal_01160 4.6e-138 497.3 Bacilli bglH 3.2.1.86 ko:K01223 ko00010,ko00500,map00010,map00500 R00839,R05133,R05134 RC00049,RC00171,RC00714 ko00000,ko00001,ko01000 GT1 Bacteria 1TP19@1239,4HA1W@91061,COG2723@1,COG2723@2 NA|NA|NA G Belongs to the glycosyl hydrolase 1 family IIAPBPCI_01676 1123318.KB904593_gene1608 2e-18 97.4 Bacilli bglH 3.2.1.86 ko:K01223 ko00010,ko00500,map00010,map00500 R00839,R05133,R05134 RC00049,RC00171,RC00714 ko00000,ko00001,ko01000 GT1 Bacteria 1TP19@1239,4HA1W@91061,COG2723@1,COG2723@2 NA|NA|NA G Belongs to the glycosyl hydrolase 1 family IIAPBPCI_01677 322159.STER_1050 1.3e-199 702.2 Bacilli Bacteria 1TQBF@1239,4HGFS@91061,COG0628@1,COG0628@2 NA|NA|NA S hmm pf01594 IIAPBPCI_01678 1046629.Ssal_01162 2.5e-101 374.8 Bacilli Bacteria 1UXY8@1239,4HFD9@91061,COG0406@1,COG0406@2 NA|NA|NA G Belongs to the phosphoglycerate mutase family IIAPBPCI_01679 264199.stu1071 3.7e-60 237.3 Bacteria supH 3.1.3.102,3.1.3.104 ko:K20861 ko00740,ko01100,ko01110,map00740,map01100,map01110 M00125 R00548,R07280 RC00017 ko00000,ko00001,ko00002,ko01000 Bacteria COG0561@1,COG0561@2 NA|NA|NA Q phosphatase activity IIAPBPCI_01680 1046629.Ssal_01165 1.1e-15 88.6 Bacilli supH 3.1.3.102,3.1.3.104 ko:K20861 ko00740,ko01100,ko01110,map00740,map01100,map01110 M00125 R00548,R07280 RC00017 ko00000,ko00001,ko00002,ko01000 Bacteria 1V1SQ@1239,4IPTG@91061,COG0561@1,COG0561@2 NA|NA|NA S Sucrose-6F-phosphate phosphohydrolase IIAPBPCI_01681 322159.STER_1054 2.2e-94 351.7 Bacilli Bacteria 1VA6K@1239,4HKNU@91061,COG4767@1,COG4767@2 NA|NA|NA V VanZ like family IIAPBPCI_01682 322159.STER_0138 2.7e-39 167.5 Bacilli ko:K07485 ko00000 Bacteria 1TQ93@1239,4IR2T@91061,COG3464@1,COG3464@2 NA|NA|NA L Helix-turn-helix domain of transposase family ISL3 IIAPBPCI_01683 322159.STER_0151 3.6e-64 250.8 Firmicutes ko:K07485 ko00000 Bacteria 1TQ93@1239,COG3464@1,COG3464@2 NA|NA|NA L Transposase IIAPBPCI_01684 1069533.Sinf_0020 2.9e-24 117.1 Firmicutes Bacteria 1TQ93@1239,COG3464@1,COG3464@2 NA|NA|NA L Transposase IIAPBPCI_01685 1069533.Sinf_0729 4.2e-192 677.2 Bacilli wbbI GO:0003674,GO:0003824,GO:0008194,GO:0008378,GO:0008921,GO:0016740,GO:0016757,GO:0016758,GO:0035250 iAF1260.b2034,iBWG_1329.BWG_1824,iECDH10B_1368.ECDH10B_2184,iECDH1ME8569_1439.ECDH1ME8569_1971,iECSF_1327.ECSF_1923,iEcDH1_1363.EcDH1_1623,iJO1366.b2034,iY75_1357.Y75_RS10645 Bacteria 1UZFG@1239,4ISTK@91061,COG0438@1,COG0438@2 NA|NA|NA M transferase activity, transferring glycosyl groups IIAPBPCI_01686 1069533.Sinf_0727 1e-212 745.7 Bacilli glf GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008150,GO:0008767,GO:0009273,GO:0009987,GO:0016020,GO:0016853,GO:0016866,GO:0030312,GO:0036094,GO:0042546,GO:0043167,GO:0043168,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0050660,GO:0050662,GO:0071554,GO:0071766,GO:0071840,GO:0071944,GO:0097159,GO:1901265,GO:1901363 5.4.99.9 ko:K01854 ko00052,ko00520,map00052,map00520 R00505,R09009 RC00317,RC02396 ko00000,ko00001,ko01000 iNJ661.Rv3809c Bacteria 1TQB9@1239,4HB5F@91061,COG0562@1,COG0562@2 NA|NA|NA M UDP-galactopyranose mutase IIAPBPCI_01687 904306.HMPREF9192_1685 5.4e-243 846.7 Bacilli epsU Bacteria 1TP7R@1239,4HC84@91061,COG2244@1,COG2244@2 NA|NA|NA S Polysaccharide biosynthesis protein IIAPBPCI_01688 862970.SAIN_1720 6.3e-173 613.6 Bacilli Bacteria 1VC7Z@1239,2BVGB@1,32U6R@2,4HNDJ@91061 NA|NA|NA IIAPBPCI_01689 862970.SAIN_1721 7.1e-149 533.5 Bacilli Bacteria 1V0TF@1239,4HN74@91061,COG1215@1,COG1215@2 NA|NA|NA M Glycosyltransferase like family 2 IIAPBPCI_01690 862970.SAIN_1722 8.6e-123 446.8 Bacilli Bacteria 1V0TF@1239,4ISVG@91061,COG1215@1,COG1215@2 NA|NA|NA M Glycosyltransferase, group 2 family protein IIAPBPCI_01692 904306.HMPREF9192_1681 4.6e-73 280.4 Bacilli Z012_10770 Bacteria 1V8R9@1239,4HW77@91061,COG3955@1,COG3955@2 NA|NA|NA M Domain of unknown function (DUF1919) IIAPBPCI_01693 1116231.SMA_0863 4.3e-206 723.8 Bacilli wcoF Bacteria 1TR6R@1239,4HEIZ@91061,COG0438@1,COG0438@2 NA|NA|NA M Glycosyltransferase, group 1 family protein IIAPBPCI_01694 904306.HMPREF9192_1679 5e-218 763.5 Bacilli rgpAc ko:K12996 ko00000,ko01000,ko01003,ko01005 GT4 Bacteria 1TR0Y@1239,4IPU2@91061,COG0438@1,COG0438@2 NA|NA|NA M group 1 family protein IIAPBPCI_01695 264199.stu1108 1e-251 875.5 Bacilli cpsE GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 Bacteria 1TP7M@1239,4HB3Z@91061,COG2148@1,COG2148@2 NA|NA|NA M Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase IIAPBPCI_01696 322159.STER_1068 2.5e-114 418.3 Bacilli cpsD Bacteria 1TS4R@1239,4HCEN@91061,COG0489@1,COG0489@2 NA|NA|NA D COG0489 ATPases involved in chromosome partitioning IIAPBPCI_01697 1046629.Ssal_01180 1.7e-109 402.1 Bacilli cps4C Bacteria 1UZCR@1239,4HE26@91061,COG3944@1,COG3944@2 NA|NA|NA M biosynthesis protein IIAPBPCI_01698 322159.STER_1070 1.9e-135 488.4 Bacilli cpsB 3.1.3.48 ko:K01104 ko00000,ko01000 Bacteria 1TQ1T@1239,4HDZR@91061,COG4464@1,COG4464@2 NA|NA|NA GM Capsular polysaccharide biosynthesis protein IIAPBPCI_01699 322159.STER_1071 2.1e-250 871.3 Bacilli cps4A Bacteria 1TR1B@1239,4HDRS@91061,COG1316@1,COG1316@2 NA|NA|NA K Cell envelope-like function transcriptional attenuator common domain protein IIAPBPCI_01700 322159.STER_1072 4.9e-128 463.8 Bacilli deoD GO:0003674,GO:0003824,GO:0004731,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006152,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009116,GO:0009164,GO:0009987,GO:0015949,GO:0016740,GO:0016757,GO:0016763,GO:0019439,GO:0019686,GO:0033554,GO:0034641,GO:0034655,GO:0034656,GO:0042278,GO:0042802,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:1901135,GO:1901136,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901657,GO:1901658 2.4.2.1,2.4.2.28 ko:K00772,ko:K03784 ko00230,ko00240,ko00270,ko00760,ko01100,ko01110,map00230,map00240,map00270,map00760,map01100,map01110 M00034 R01402,R01561,R01863,R01969,R02147,R02294,R02295,R02297,R02484,R02557,R02748,R08368,R10244 RC00033,RC00063,RC00122,RC02819 ko00000,ko00001,ko00002,ko01000 iAPECO1_1312.APECO1_1997,iB21_1397.B21_04226,iE2348C_1286.E2348C_4682,iEC042_1314.EC042_4881,iECABU_c1320.ECABU_c50190,iECBD_1354.ECBD_3636,iECB_1328.ECB_04260,iECD_1391.ECD_04260,iECED1_1282.ECED1_5255,iECIAI39_1322.ECIAI39_4916,iECNA114_1301.ECNA114_4626,iECO26_1355.ECO26_5590,iECOK1_1307.ECOK1_4950,iECP_1309.ECP_4768,iEcolC_1368.EcolC_3672,iLF82_1304.LF82_0467,iNRG857_1313.NRG857_22170,iPC815.YPO0440,iSFV_1184.SFV_4418,iSF_1195.SF4416,iSFxv_1172.SFxv_4809,iS_1188.S4687,iUMN146_1321.UM146_22680,iUMNK88_1353.UMNK88_5303,iUTI89_1310.UTI89_C5155,ic_1306.c5468 Bacteria 1TQPG@1239,4HADM@91061,COG0813@1,COG0813@2 NA|NA|NA F purine nucleoside phosphorylase IIAPBPCI_01701 904306.HMPREF9192_1673 7e-38 162.9 Bacilli yfeJ 6.3.5.2 ko:K01951 ko00230,ko00983,ko01100,map00230,map00983,map01100 M00050 R01230,R01231,R08244 RC00010,RC00204 ko00000,ko00001,ko00002,ko01000,ko01002 Bacteria 1V97T@1239,4HIKV@91061,COG0518@1,COG0518@2 NA|NA|NA F glutamine amidotransferase IIAPBPCI_01702 904306.HMPREF9192_1673 3.7e-67 260.8 Bacilli yfeJ 6.3.5.2 ko:K01951 ko00230,ko00983,ko01100,map00230,map00983,map01100 M00050 R01230,R01231,R08244 RC00010,RC00204 ko00000,ko00001,ko00002,ko01000,ko01002 Bacteria 1V97T@1239,4HIKV@91061,COG0518@1,COG0518@2 NA|NA|NA F glutamine amidotransferase IIAPBPCI_01703 904306.HMPREF9192_1672 9e-88 329.7 Firmicutes clcA_2 ko:K03281 ko00000 2.A.49 Bacteria 1V07H@1239,COG0038@1,COG0038@2 NA|NA|NA P chloride IIAPBPCI_01704 322159.STER_1075 4e-150 537.3 Bacilli punA 2.4.2.1 ko:K03783 ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110 R01561,R01863,R01969,R02147,R02294,R02295,R02297,R02484,R02557,R02748,R08368,R10244 RC00033,RC00063,RC00122 ko00000,ko00001,ko01000 Bacteria 1TQ37@1239,4HABP@91061,COG0005@1,COG0005@2 NA|NA|NA F The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate IIAPBPCI_01705 264199.stu1118 8.1e-41 172.6 Bacteria Bacteria COG3797@1,COG3797@2 NA|NA|NA S Protein of unknown function (DUF1697) IIAPBPCI_01706 322159.STER_1077 3.8e-237 827.0 Bacilli deoB GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008973,GO:0016853,GO:0016866,GO:0016868,GO:0044424,GO:0044444,GO:0044464 5.4.2.7 ko:K01839 ko00030,ko00230,map00030,map00230 R01057,R02749 RC00408 ko00000,ko00001,ko01000 Bacteria 1TP70@1239,4H9RU@91061,COG1015@1,COG1015@2 NA|NA|NA G Phosphotransfer between the C1 and C5 carbon atoms of pentose IIAPBPCI_01707 264199.stu1121 5e-122 443.7 Bacilli rpiA GO:0003674,GO:0003824,GO:0004751,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006014,GO:0006081,GO:0006098,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009052,GO:0009117,GO:0009987,GO:0016853,GO:0016860,GO:0016861,GO:0019321,GO:0019362,GO:0019637,GO:0019682,GO:0019693,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046496,GO:0051156,GO:0051186,GO:0055086,GO:0071704,GO:0072524,GO:1901135,GO:1901360,GO:1901564 2.7.1.12,2.7.1.15,5.3.1.6 ko:K00851,ko:K00852,ko:K01807 ko00030,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01100,map01110,map01120,map01130,map01200,map01230 M00004,M00007,M00165,M00167,M00580 R01051,R01056,R01737,R02750 RC00002,RC00017,RC00434 ko00000,ko00001,ko00002,ko01000 Bacteria 1V1DB@1239,4HFQ7@91061,COG0120@1,COG0120@2 NA|NA|NA G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate IIAPBPCI_01709 1316408.HSISM1_134 5.7e-08 62.8 Bacilli Bacteria 1VU2V@1239,4HU5W@91061,COG3266@1,COG3266@2 NA|NA|NA V Glucan-binding protein C IIAPBPCI_01710 435842.HMPREF0848_00593 2.7e-22 111.3 Bacilli Bacteria 1VU2V@1239,4HU5W@91061,COG3266@1,COG3266@2 NA|NA|NA V Glucan-binding protein C IIAPBPCI_01711 322159.STER_1082 2.4e-112 411.4 Bacilli ung2 3.2.2.27 ko:K21929 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Bacteria 1V1F8@1239,4HFVS@91061,COG1573@1,COG1573@2 NA|NA|NA L Uracil-DNA glycosylase IIAPBPCI_01712 264199.stu1127 9e-275 952.2 Bacilli pepV 3.5.1.18 ko:K01270,ko:K01274,ko:K01439 ko00300,ko00480,ko01100,ko01120,ko01230,map00300,map00480,map01100,map01120,map01230 M00016 R00899,R02734,R04951 RC00064,RC00090,RC00096,RC00141 ko00000,ko00001,ko00002,ko01000,ko01002 Bacteria 1TPEG@1239,4HC14@91061,COG0624@1,COG0624@2 NA|NA|NA E Dipeptidase IIAPBPCI_01713 264199.stu1128 6.4e-27 125.9 Bacilli dmpI GO:0003674,GO:0003824,GO:0006725,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0044237 5.3.2.6 ko:K01821 ko00362,ko00621,ko00622,ko01100,ko01120,ko01220,map00362,map00621,map00622,map01100,map01120,map01220 M00569 R03966,R05389 RC01040,RC01355 ko00000,ko00001,ko00002,ko01000 Bacteria 1VKD5@1239,4HRBS@91061,COG1942@1,COG1942@2 NA|NA|NA G Belongs to the 4-oxalocrotonate tautomerase family IIAPBPCI_01714 264199.stu1129 2e-41 174.9 Bacilli XK27_03610 Bacteria 1V77V@1239,4HKYX@91061,COG0454@1,COG0456@2 NA|NA|NA K Gnat family IIAPBPCI_01715 264199.stu1807 7.2e-83 313.2 Bacilli ko:K07491 ko00000 Bacteria 1V1CM@1239,4HGN6@91061,COG1943@1,COG1943@2 NA|NA|NA L Transposase IIAPBPCI_01716 1046629.Ssal_01190 1.5e-56 225.3 Bacilli rplT GO:0000027,GO:0000900,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006355,GO:0006412,GO:0006417,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015934,GO:0016020,GO:0016043,GO:0017148,GO:0019219,GO:0019222,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0030371,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045182,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0051252,GO:0060255,GO:0065003,GO:0065007,GO:0070180,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0080090,GO:0090079,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903506,GO:1990904,GO:2000112,GO:2000113,GO:2001141 ko:K02887 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1V6DB@1239,4HH2W@91061,COG0292@1,COG0292@2 NA|NA|NA J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit IIAPBPCI_01717 264199.stu1133 8.1e-28 129.0 Bacilli rpmI GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 ko:K02916 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1VF5W@1239,4HNIQ@91061,COG0291@1,COG0291@2 NA|NA|NA J Belongs to the bacterial ribosomal protein bL35 family IIAPBPCI_01718 264199.stu1134 5.9e-86 323.6 Bacilli infC GO:0000049,GO:0001731,GO:0002181,GO:0002183,GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006412,GO:0006413,GO:0006417,GO:0006446,GO:0006518,GO:0006807,GO:0006950,GO:0006996,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009266,GO:0009409,GO:0009628,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0016020,GO:0016043,GO:0019222,GO:0019538,GO:0022411,GO:0022607,GO:0022613,GO:0022618,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031334,GO:0032268,GO:0032270,GO:0032790,GO:0032984,GO:0032988,GO:0032991,GO:0034248,GO:0034250,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0043021,GO:0043022,GO:0043024,GO:0043043,GO:0043170,GO:0043254,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0045727,GO:0045948,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065003,GO:0065007,GO:0070992,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0080090,GO:0097159,GO:1901193,GO:1901195,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903008,GO:1904688,GO:1904690,GO:1990856,GO:1990904,GO:2000112,GO:2000765,GO:2000767 ko:K02520 ko00000,ko03012,ko03029 Bacteria 1V1RC@1239,4HI4P@91061,COG0290@1,COG0290@2 NA|NA|NA J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins IIAPBPCI_01719 322159.STER_1090 2.5e-121 441.4 Bacilli cmk GO:0003674,GO:0003824,GO:0004127,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006573,GO:0006575,GO:0006725,GO:0006732,GO:0006753,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009117,GO:0009123,GO:0009165,GO:0009314,GO:0009628,GO:0009987,GO:0010165,GO:0010212,GO:0015939,GO:0015940,GO:0015949,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0034654,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046939,GO:0046940,GO:0050145,GO:0050896,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 1.17.7.4,2.5.1.19,2.7.1.26,2.7.4.25,2.7.7.2,6.3.2.1 ko:K00800,ko:K00945,ko:K02945,ko:K03527,ko:K03977,ko:K11753,ko:K13799 ko00240,ko00400,ko00410,ko00740,ko00770,ko00900,ko01100,ko01110,ko01130,ko01230,ko03010,map00240,map00400,map00410,map00740,map00770,map00900,map01100,map01110,map01130,map01230,map03010 M00022,M00052,M00096,M00119,M00125,M00178 R00158,R00161,R00512,R00549,R01665,R02473,R03460,R05884,R08210 RC00002,RC00017,RC00096,RC00141,RC00350,RC01137,RC01487 br01610,ko00000,ko00001,ko00002,ko01000,ko03009,ko03011 iPC815.YPO1391,iSDY_1059.SDY_2348 Bacteria 1V3IA@1239,4HFZE@91061,COG0283@1,COG0283@2 NA|NA|NA F Belongs to the cytidylate kinase family. Type 1 subfamily IIAPBPCI_01720 264199.stu1136 2.8e-18 99.0 Bacilli Bacteria 1VD79@1239,4HT02@91061,COG1388@1,COG1388@2 NA|NA|NA M LysM domain IIAPBPCI_01721 264199.stu1138 1.2e-88 332.4 Bacilli ebsA Bacteria 1VQ5S@1239,2FI04@1,349T2@2,4HYC5@91061 NA|NA|NA S Family of unknown function (DUF5322) IIAPBPCI_01722 264199.stu1139 6.5e-229 799.7 Bacilli pepT GO:0003674,GO:0003824,GO:0004177,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0009987,GO:0016787,GO:0019538,GO:0034641,GO:0034701,GO:0043170,GO:0043603,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0045148,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.11.4 ko:K01258 ko00000,ko01000,ko01002 Bacteria 1TP3A@1239,4HAZE@91061,COG2195@1,COG2195@2 NA|NA|NA E Cleaves the N-terminal amino acid of tripeptides IIAPBPCI_01723 322159.STER_1096 6e-97 360.1 Bacilli lepB 3.4.21.89 ko:K03100 ko02024,ko03060,map02024,map03060 ko00000,ko00001,ko01000,ko01002 Bacteria 1V2BJ@1239,4HGCB@91061,COG0681@1,COG0681@2 NA|NA|NA U Belongs to the peptidase S26 family IIAPBPCI_01724 264199.stu1141 2.4e-223 781.2 Bacilli Bacteria 1TT97@1239,4HAIA@91061,COG0457@1,COG0457@2 NA|NA|NA G COG0457 FOG TPR repeat IIAPBPCI_01725 264199.stu1142 8.1e-176 623.2 Bacilli yubA Bacteria 1TQ84@1239,4H9SR@91061,COG0628@1,COG0628@2 NA|NA|NA S permease IIAPBPCI_01726 264199.stu1143 3.5e-93 347.4 Bacilli mutX 3.6.1.55 ko:K03574 ko00000,ko01000,ko03400 Bacteria 1V66I@1239,4HHRE@91061,COG1051@1,COG1051@2 NA|NA|NA F NTP pyrophosphohydrolases including oxidative damage repair enzymes IIAPBPCI_01727 322159.STER_1100 5.2e-162 577.0 Bacilli ftsX GO:0000910,GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0007049,GO:0007154,GO:0007165,GO:0007166,GO:0008150,GO:0008356,GO:0009966,GO:0009987,GO:0010033,GO:0010646,GO:0016020,GO:0016021,GO:0016043,GO:0019221,GO:0022402,GO:0022603,GO:0022607,GO:0023051,GO:0023052,GO:0030312,GO:0031224,GO:0031226,GO:0032506,GO:0034097,GO:0040007,GO:0042173,GO:0042221,GO:0043937,GO:0043938,GO:0044085,GO:0044425,GO:0044459,GO:0044464,GO:0045595,GO:0045597,GO:0045881,GO:0048518,GO:0048522,GO:0048583,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051094,GO:0051301,GO:0051716,GO:0065007,GO:0070098,GO:0070297,GO:0070887,GO:0071310,GO:0071345,GO:0071840,GO:0071944,GO:0090529,GO:1902531 ko:K09811,ko:K09812 ko02010,map02010 M00256 ko00000,ko00001,ko00002,ko02000,ko03036 3.A.1.140 Bacteria 1TPND@1239,4HA5A@91061,COG2177@1,COG2177@2 NA|NA|NA D Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation IIAPBPCI_01728 264199.stu1145 5.5e-124 450.3 Bacilli ftsE GO:0000166,GO:0003674,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0008144,GO:0008150,GO:0009898,GO:0009987,GO:0016020,GO:0017076,GO:0019897,GO:0019898,GO:0030554,GO:0031234,GO:0032153,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042221,GO:0043167,GO:0043168,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0046677,GO:0050896,GO:0051301,GO:0071944,GO:0097159,GO:0097367,GO:0098552,GO:0098562,GO:1901265,GO:1901363 ko:K09811,ko:K09812 ko02010,map02010 M00256 ko00000,ko00001,ko00002,ko02000,ko03036 3.A.1.140 Bacteria 1TP58@1239,4H9Z2@91061,COG2884@1,COG2884@2 NA|NA|NA D cell division ATP-binding protein FtsE IIAPBPCI_01729 264199.stu1146 1.8e-181 641.7 Bacilli prfB GO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0016149,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 ko:K02836 ko00000,ko03012 Bacteria 1TPSB@1239,4H9N2@91061,COG1186@1,COG1186@2 NA|NA|NA J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA IIAPBPCI_01730 322159.STER_1104 1.2e-202 712.2 Bacilli queG GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0016491,GO:0018130,GO:0019438,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0052693,GO:0055086,GO:0055114,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 1.17.99.6 ko:K18979 ko00000,ko01000,ko03016 Bacteria 1TP6Q@1239,4HAEW@91061,COG1600@1,COG1600@2 NA|NA|NA C Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) IIAPBPCI_01731 264199.stu1147 9.2e-183 646.0 Bacilli yjjH Bacteria 1V9B5@1239,4HJX0@91061,COG1409@1,COG1409@2 NA|NA|NA S Calcineurin-like phosphoesterase IIAPBPCI_01732 264199.stu1149 2e-135 488.4 Bacilli nfrA 1.5.1.38,1.5.1.39 ko:K19285,ko:K19286 ko00740,ko01100,map00740,map01100 R05705,R05706 RC00126 ko00000,ko00001,ko01000 Bacteria 1UB8S@1239,4HEGP@91061,COG0778@1,COG0778@2 NA|NA|NA C nitroreductase IIAPBPCI_01733 322159.STER_1107 0.0 1628.2 Bacilli pacL 3.6.3.8 ko:K01537 ko00000,ko01000 3.A.3.2 Bacteria 1TPF5@1239,4H9S5@91061,COG0474@1,COG0474@2 NA|NA|NA P cation transport ATPase IIAPBPCI_01734 264199.stu1151 3.4e-67 260.8 Bacteria ywiB Bacteria COG4506@1,COG4506@2 NA|NA|NA S Domain of unknown function (DUF1934) IIAPBPCI_01735 322159.STER_1109 2.4e-44 184.5 Bacteria XK27_00115 2.3.1.128 ko:K03789 ko00000,ko01000,ko03009 Bacteria COG0454@1,COG0456@2 NA|NA|NA K acetyltransferase IIAPBPCI_01736 264199.stu1154 9.2e-147 526.2 Bacilli yidA GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019203,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0050308 Bacteria 1TR16@1239,4HCZ6@91061,COG0561@1,COG0561@2 NA|NA|NA S hydrolases of the HAD superfamily IIAPBPCI_01737 264199.stu1155 2.6e-230 804.3 Bacilli murM 2.3.2.10,2.3.2.16 ko:K05363,ko:K11693,ko:K12554 ko00550,ko01100,map00550,map01100 R08776,R08779,R08780 RC00055,RC00064,RC00096 ko00000,ko00001,ko01000,ko01011 Bacteria 1TRZU@1239,4HC1Z@91061,COG2348@1,COG2348@2 NA|NA|NA V protein involved in methicillin resistance IIAPBPCI_01738 322159.STER_1113 4.2e-34 150.2 Bacteria ko:K09790 ko00000 Bacteria COG2832@1,COG2832@2 NA|NA|NA F Protein of unknown function (DUF454) IIAPBPCI_01739 322159.STER_1114 3.9e-153 547.4 Bacilli vicX 3.1.26.11 ko:K00784 ko03013,map03013 ko00000,ko00001,ko01000,ko03016 Bacteria 1TQ8E@1239,4HAKD@91061,COG1235@1,COG1235@2 NA|NA|NA S Metal-dependent hydrolases of the beta-lactamase superfamily I IIAPBPCI_01740 322159.STER_1115 5.8e-247 859.8 Bacilli vicK 2.7.13.3 ko:K07652 ko02020,map02020 M00459 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Bacteria 1TQ1H@1239,4HA52@91061,COG5002@1,COG5002@2 NA|NA|NA T Histidine kinase IIAPBPCI_01741 322159.STER_1116 9.9e-129 466.1 Bacilli Bacteria 1TPQG@1239,4HA8Q@91061,COG0745@1,COG0745@2 NA|NA|NA KT Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain IIAPBPCI_01742 322159.STER_1117 2.1e-140 505.0 Bacilli glnQ 3.6.3.21 ko:K02028,ko:K10041 ko02010,map02010 M00228,M00236 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.3 Bacteria 1TNYD@1239,4H9WY@91061,COG1126@1,COG1126@2 NA|NA|NA E abc transporter atp-binding protein IIAPBPCI_01743 322159.STER_1118 9.2e-150 536.2 Bacilli peb1A GO:0005575,GO:0005623,GO:0009986,GO:0044464 ko:K10039 ko02010,map02010 M00228 ko00000,ko00001,ko00002,ko02000 3.A.1.3 Bacteria 1TT11@1239,4HAHV@91061,COG0834@1,COG0834@2 NA|NA|NA ET ABC-type amino acid transport signal transduction systems, periplasmic component domain IIAPBPCI_01744 322159.STER_1119 8e-115 419.9 Bacilli gltJ GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K02029,ko:K10003,ko:K10040 ko02010,ko02020,map02010,map02020 M00228,M00230,M00236 ko00000,ko00001,ko00002,ko02000 3.A.1.3,3.A.1.3.19,3.A.1.3.4 iJN746.PP_1070 Bacteria 1TQ5K@1239,4HE9C@91061,COG0765@1,COG0765@2 NA|NA|NA P ABC transporter (Permease IIAPBPCI_01745 264199.stu1164 3.8e-111 407.5 Bacilli tcyB_2 ko:K02029,ko:K02030,ko:K10040,ko:K17073,ko:K17074 ko02010,map02010 M00228,M00236,M00589 ko00000,ko00001,ko00002,ko02000 3.A.1.3,3.A.1.3.20 Bacteria 1V14N@1239,4HJ9W@91061,COG0765@1,COG0765@2 NA|NA|NA P ABC transporter (permease) IIAPBPCI_01746 264199.stu1165 7e-124 450.3 Bacilli endA ko:K15051 ko00000 Bacteria 1V4X2@1239,4HIF5@91061,COG2169@1,COG2169@2 NA|NA|NA F DNA RNA non-specific endonuclease IIAPBPCI_01747 264199.stu1166 1.2e-25 121.7 Bacilli epuA Bacteria 1VMAH@1239,2EK0E@1,33DQZ@2,4HRG1@91061 NA|NA|NA S DNA-directed RNA polymerase subunit beta IIAPBPCI_01748 322159.STER_1123 1.1e-231 808.9 Bacilli murA 2.5.1.7 ko:K00790 ko00520,ko00550,ko01100,map00520,map00550,map01100 R00660 RC00350 ko00000,ko00001,ko01000,ko01011 Bacteria 1TPAU@1239,4H9KI@91061,COG0766@1,COG0766@2 NA|NA|NA M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine IIAPBPCI_01750 322159.STER_1125 6e-196 689.9 Bacilli galE 5.1.3.2 ko:K01784 ko00052,ko00520,ko01100,map00052,map00520,map01100 M00361,M00362,M00632 R00291,R02984 RC00289 ko00000,ko00001,ko00002,ko01000 Bacteria 1TQ7N@1239,4H9U5@91061,COG1087@1,COG1087@2 NA|NA|NA M Belongs to the NAD(P)-dependent epimerase dehydratase family IIAPBPCI_01751 322159.STER_1134 1.3e-36 160.2 Firmicutes 5.1.3.2 ko:K01784 ko00052,ko00520,ko01100,map00052,map00520,map01100 M00361,M00362,M00632 R00291,R02984 RC00289 ko00000,ko00001,ko00002,ko01000 Bacteria 1UYUX@1239,COG0451@1,COG0451@2 NA|NA|NA GM Psort location CytoplasmicMembrane, score IIAPBPCI_01752 264199.stu1172 6e-203 713.4 Bacilli metK GO:0003674,GO:0003824,GO:0004478,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016740,GO:0016765,GO:0044424,GO:0044444,GO:0044464 2.5.1.6 ko:K00789 ko00270,ko01100,ko01110,ko01230,map00270,map01100,map01110,map01230 M00034,M00035,M00368,M00609 R00177,R04771 RC00021,RC01211 ko00000,ko00001,ko00002,ko01000 Bacteria 1TPCV@1239,4HB33@91061,COG0192@1,COG0192@2 NA|NA|NA H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme IIAPBPCI_01753 322159.STER_1136 4.2e-175 620.5 Bacilli birA GO:0000166,GO:0000976,GO:0000984,GO:0001017,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003824,GO:0004077,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0006082,GO:0006464,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009305,GO:0009374,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0017053,GO:0017076,GO:0017144,GO:0018130,GO:0018271,GO:0019538,GO:0019752,GO:0019842,GO:0030554,GO:0031406,GO:0032553,GO:0032555,GO:0032559,GO:0032787,GO:0032991,GO:0033218,GO:0033293,GO:0034641,GO:0035639,GO:0036094,GO:0036211,GO:0042364,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043565,GO:0043603,GO:0043604,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0046983,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901681,GO:1990837 6.3.4.15 ko:K03524,ko:K04096 ko00780,ko01100,map00780,map01100 R01074,R05145 RC00043,RC00070,RC00096,RC02896 ko00000,ko00001,ko01000,ko03000 Bacteria 1TQCU@1239,4HB60@91061,COG0340@1,COG0340@2,COG1654@1,COG1654@2 NA|NA|NA HK Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor IIAPBPCI_01754 322159.STER_1138 7.1e-295 1019.2 Bacilli dnaX GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901576 2.7.7.7 ko:K02341,ko:K02343 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Bacteria 1TPS9@1239,4HAUE@91061,COG2812@1,COG2812@2 NA|NA|NA L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity IIAPBPCI_01755 322159.STER_1139 2.7e-88 331.3 Bacilli ytsP 1.8.4.14 ko:K08968 ko00270,map00270 R02025 RC00639 ko00000,ko00001,ko01000 Bacteria 1V6GQ@1239,4HH7X@91061,COG1956@1,COG1956@2 NA|NA|NA T GAF domain-containing protein IIAPBPCI_01756 264199.stu1177 3e-162 577.8 Bacilli miaA GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 ko:K00791 ko00908,ko01100,ko01110,map00908,map01100,map01110 R01122 RC02820 ko00000,ko00001,ko01000,ko01006,ko03016 Bacteria 1TPSC@1239,4HAVW@91061,COG0324@1,COG0324@2 NA|NA|NA J Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) IIAPBPCI_01757 1046629.Ssal_01245 7.2e-20 102.4 Bacilli WQ51_02665 Bacteria 1VPEZ@1239,2C91M@1,33E1E@2,4HRR2@91061 NA|NA|NA S Protein of unknown function (DUF3042) IIAPBPCI_01759 264199.stu1179 8.5e-57 226.1 Bacilli rplS GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070180,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02884 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1V6FT@1239,4HIK3@91061,COG0335@1,COG0335@2 NA|NA|NA J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site IIAPBPCI_01760 322159.STER_1145 2.1e-219 768.1 Bacilli XK27_05110 Bacteria 1TPX0@1239,4HBN3@91061,COG0038@1,COG0038@2 NA|NA|NA P chloride IIAPBPCI_01761 264199.stu1181 8.7e-41 172.6 Bacteria pheA GO:0003674,GO:0003824,GO:0004106,GO:0004664,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006558,GO:0006570,GO:0006571,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009094,GO:0009095,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0016853,GO:0016866,GO:0017144,GO:0019438,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902221,GO:1902223 1.3.1.12,2.3.1.79,4.2.1.51,5.4.99.5 ko:K00661,ko:K04092,ko:K04093,ko:K04516,ko:K14170,ko:K14187 ko00400,ko00401,ko01100,ko01110,ko01130,ko01230,map00400,map00401,map01100,map01110,map01130,map01230 M00024,M00025 R00691,R01373,R01715,R01728 RC00125,RC00360,RC03116 ko00000,ko00001,ko00002,ko01000 iECNA114_1301.ECNA114_2667 Bacteria COG1605@1,COG1605@2 NA|NA|NA E Chorismate mutase IIAPBPCI_01762 264199.stu1182 1.7e-282 978.0 Bacilli clcA GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0006821,GO:0008150,GO:0008324,GO:0015075,GO:0015077,GO:0015078,GO:0015291,GO:0015297,GO:0015298,GO:0015299,GO:0015318,GO:0015672,GO:0015698,GO:0015706,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0022890,GO:0031224,GO:0031226,GO:0031404,GO:0034220,GO:0042802,GO:0043167,GO:0043168,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071705,GO:0071944,GO:0098655,GO:0098660,GO:0098662,GO:1902600 ko:K03281 ko00000 2.A.49 iAF1260.b0155,iB21_1397.B21_00153,iBWG_1329.BWG_0148,iE2348C_1286.E2348C_0162,iEC042_1314.EC042_0155,iEC55989_1330.EC55989_0149,iECBD_1354.ECBD_3463,iECDH10B_1368.ECDH10B_0135,iECDH1ME8569_1439.ECDH1ME8569_0149,iECD_1391.ECD_00154,iECIAI1_1343.ECIAI1_0153,iECO103_1326.ECO103_0155,iECSE_1348.ECSE_0156,iECUMN_1333.ECUMN_0152,iECW_1372.ECW_m0152,iEKO11_1354.EKO11_3761,iETEC_1333.ETEC_0151,iEcDH1_1363.EcDH1_3447,iEcE24377_1341.EcE24377A_0160,iEcolC_1368.EcolC_3504,iJO1366.b0155,iSSON_1240.SSON_0167,iUMNK88_1353.UMNK88_159,iWFL_1372.ECW_m0152,iY75_1357.Y75_RS00790,iZ_1308.Z0166 Bacteria 1TPX0@1239,4HD2H@91061,COG0038@1,COG0038@2 NA|NA|NA P Chloride transporter, ClC family IIAPBPCI_01763 435842.HMPREF0848_00535 1e-75 289.3 Bacilli fld ko:K03839 ko00000 Bacteria 1V7AG@1239,4HMJF@91061,COG0716@1,COG0716@2 NA|NA|NA C Flavodoxin IIAPBPCI_01764 1214166.ALLG01000018_gene972 3.3e-14 84.7 Streptococcus suis XK27_08880 Bacteria 1U92D@1239,1WTJN@1307,29R1H@1,30C2M@2,4IJ2X@91061 NA|NA|NA IIAPBPCI_01765 264199.stu1185 3e-125 454.5 Bacilli XK27_08875 Bacteria 1VW9X@1239,4HWF8@91061,COG5549@1,COG5549@2 NA|NA|NA O Zinc-dependent metalloprotease IIAPBPCI_01766 264199.stu1186 1.1e-149 535.8 Bacilli estA ko:K03930 ko00000,ko01000 CE1 Bacteria 1TPA9@1239,4IPZQ@91061,COG0627@1,COG0627@2 NA|NA|NA S Putative esterase IIAPBPCI_01767 264199.stu1187 1.9e-308 1064.3 Bacilli rnjB GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0006139,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016787,GO:0016788,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360 ko:K12574 ko03018,map03018 ko00000,ko00001,ko01000,ko03019 Bacteria 1TQ9G@1239,4HAAP@91061,COG0595@1,COG0595@2 NA|NA|NA S An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay IIAPBPCI_01768 264199.stu1188 4.4e-135 487.3 Bacilli XK27_08845 ko:K05833 M00247 ko00000,ko00002,ko02000 Bacteria 1TPAN@1239,4HCHC@91061,COG1101@1,COG1101@2 NA|NA|NA S abc transporter atp-binding protein IIAPBPCI_01769 264199.stu1189 2e-147 528.5 Bacilli XK27_08840 ko:K01989,ko:K05832 M00247 ko00000,ko00002,ko02000 Bacteria 1TPDJ@1239,4HBMY@91061,COG4120@1,COG4120@2 NA|NA|NA S Belongs to the binding-protein-dependent transport system permease family IIAPBPCI_01770 322159.STER_1155 5.4e-173 613.6 Bacilli XK27_08835 ko:K01989,ko:K05832 M00247 ko00000,ko00002,ko02000 Bacteria 1TPB0@1239,4HE7G@91061,COG2984@1,COG2984@2 NA|NA|NA S ABC transporter substrate binding protein IIAPBPCI_01771 246201.SM12261_0398 3.2e-17 94.0 Streptococcus mitis Bacteria 1U4JG@1239,2AHCZ@1,2TPZV@28037,317PX@2,4IEB9@91061 NA|NA|NA S Domain of unknown function (DUF4649) IIAPBPCI_01772 888833.HMPREF9421_1411 3.7e-31 141.0 Bacilli ko:K14194 ko05150,map05150 ko00000,ko00001 Bacteria 1TV1Y@1239,4HBHJ@91061,COG2373@1,COG2373@2,COG2931@1,COG2931@2 NA|NA|NA Q the current gene model (or a revised gene model) may contain a frame shift IIAPBPCI_01773 888833.HMPREF9421_1411 6.3e-28 129.8 Bacilli ko:K14194 ko05150,map05150 ko00000,ko00001 Bacteria 1TV1Y@1239,4HBHJ@91061,COG2373@1,COG2373@2,COG2931@1,COG2931@2 NA|NA|NA Q the current gene model (or a revised gene model) may contain a frame shift IIAPBPCI_01776 322159.STER_0151 3.1e-107 394.4 Firmicutes ko:K07485 ko00000 Bacteria 1TQ93@1239,COG3464@1,COG3464@2 NA|NA|NA L Transposase IIAPBPCI_01777 264199.stu0126 9.8e-112 409.5 Firmicutes Bacteria 1TQ93@1239,COG3464@1,COG3464@2 NA|NA|NA L Transposase IIAPBPCI_01778 264199.stu1196 8.2e-274 949.1 Bacilli pyk GO:0001871,GO:0003674,GO:0003824,GO:0004743,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006116,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009266,GO:0009408,GO:0009628,GO:0009986,GO:0009987,GO:0016043,GO:0016052,GO:0016053,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019674,GO:0019693,GO:0019752,GO:0022607,GO:0030246,GO:0030247,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042802,GO:0042866,GO:0043436,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0050896,GO:0051186,GO:0051188,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055086,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:2001065 2.7.1.40,2.7.7.4 ko:K00873,ko:K00958 ko00010,ko00230,ko00261,ko00450,ko00620,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00261,map00450,map00620,map00920,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230 M00001,M00002,M00049,M00050,M00176,M00596 R00200,R00430,R00529,R01138,R01858,R02320,R04929 RC00002,RC00015,RC02809,RC02889 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 iECO103_1326.ECO103_1819,iPC815.YPO2393 Bacteria 1TPGG@1239,4H9VY@91061,COG0469@1,COG0469@2 NA|NA|NA G Belongs to the pyruvate kinase family IIAPBPCI_01779 264199.stu1197 2.1e-188 664.8 Bacilli pfkA GO:0003674,GO:0003824,GO:0003872,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006116,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008443,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016052,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017144,GO:0018130,GO:0019200,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019674,GO:0019693,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046835,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0061615,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576 2.7.1.11 ko:K00850 ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04152,ko05230,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04152,map05230 M00001,M00345 R00756,R03236,R03237,R03238,R03239,R04779 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000,ko01009,ko03019 iYO844.BSU29190 Bacteria 1TPF4@1239,4HAPN@91061,COG0205@1,COG0205@2 NA|NA|NA F Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis IIAPBPCI_01780 322159.STER_1165 0.0 2029.2 Bacilli dnaE 2.7.7.7 ko:K02337 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Bacteria 1TPYG@1239,4H9T3@91061,COG0587@1,COG0587@2 NA|NA|NA L DNA polymerase IIAPBPCI_01781 264199.stu1199 1.4e-152 545.4 Bacilli sua5 2.7.7.87 ko:K07566 R10463 RC00745 ko00000,ko01000,ko03009,ko03016 Bacteria 1U3HQ@1239,4HFGZ@91061,COG0009@1,COG0009@2 NA|NA|NA J Belongs to the SUA5 family IIAPBPCI_01782 264199.stu1200 3.1e-112 411.0 Bacilli leuD 4.2.1.33,4.2.1.35 ko:K01704 ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230 M00432,M00535 R03896,R03898,R03968,R04001,R10170 RC00976,RC00977,RC01041,RC01046,RC03072 br01601,ko00000,ko00001,ko00002,ko01000 Bacteria 1V1I6@1239,4HFTY@91061,COG0066@1,COG0066@2 NA|NA|NA E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate IIAPBPCI_01783 322159.STER_1168 6.8e-275 952.6 Bacilli leuC GO:0003674,GO:0003824,GO:0003861,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006551,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009316,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0016853,GO:0016866,GO:0019752,GO:0032991,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494 4.2.1.33,4.2.1.35 ko:K01703 ko00290,ko00660,ko00966,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map00966,map01100,map01110,map01210,map01230 M00432,M00535 R03896,R03898,R03968,R04001,R08620,R08624,R08628,R08634,R08641,R08645,R10170 RC00497,RC00976,RC00977,RC01041,RC01046,RC03072 br01601,ko00000,ko00001,ko00002,ko01000 iEcE24377_1341.EcE24377A_0075,iPC815.YPO0531,iSB619.SA_RS10700 Bacteria 1TPE5@1239,4HAWA@91061,COG0065@1,COG0065@2 NA|NA|NA E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate IIAPBPCI_01784 322159.STER_1169 2.5e-43 181.0 Bacteria ysdA Bacteria COG3326@1,COG3326@2 NA|NA|NA L Membrane IIAPBPCI_01785 264199.stu1202 6.6e-190 669.8 Bacilli leuB GO:0003674,GO:0003824,GO:0003862,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006551,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0042802,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.85 ko:K00052 ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230 M00432,M00535 R00994,R04426,R10052 RC00084,RC00417,RC03036 br01601,ko00000,ko00001,ko00002,ko01000 Bacteria 1TPEM@1239,4HATP@91061,COG0473@1,COG0473@2 NA|NA|NA CE Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate IIAPBPCI_01786 322159.STER_1171 5.9e-291 1006.1 Bacilli leuA 2.3.3.13 ko:K01649 ko00290,ko00620,ko01100,ko01110,ko01210,ko01230,map00290,map00620,map01100,map01110,map01210,map01230 M00432 R01213 RC00004,RC00470,RC02754 br01601,ko00000,ko00001,ko00002,ko01000 iSB619.SA_RS10690,iYO844.BSU28280 Bacteria 1TP4Y@1239,4HA6E@91061,COG0119@1,COG0119@2 NA|NA|NA E Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) IIAPBPCI_01787 264199.stu1204 4.6e-131 473.8 Bacilli gpmA GO:0001871,GO:0003674,GO:0003824,GO:0004619,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006109,GO:0006139,GO:0006140,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009894,GO:0009986,GO:0009987,GO:0010675,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016866,GO:0016868,GO:0017144,GO:0018130,GO:0019219,GO:0019220,GO:0019222,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0030246,GO:0030247,GO:0031323,GO:0031329,GO:0032787,GO:0034248,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0043455,GO:0043456,GO:0043470,GO:0043471,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046538,GO:0046700,GO:0046939,GO:0050789,GO:0050794,GO:0051171,GO:0051174,GO:0051186,GO:0051188,GO:0051193,GO:0051196,GO:0055086,GO:0060255,GO:0062012,GO:0065007,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0080090,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1902031,GO:2001065 5.4.2.11 ko:K01834 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230 M00001,M00002,M00003 R01518 RC00536 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 Bacteria 1TQFP@1239,4HAW7@91061,COG0588@1,COG0588@2 NA|NA|NA G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate IIAPBPCI_01788 322159.STER_1173 2.5e-180 637.9 Bacilli pyrD GO:0003674,GO:0003824,GO:0004152,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006206,GO:0006207,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009987,GO:0016491,GO:0016627,GO:0016635,GO:0018130,GO:0019856,GO:0034641,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046112,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.3.1.14,1.3.98.1 ko:K00226,ko:K02823,ko:K17828 ko00240,ko01100,map00240,map01100 M00051 R01867,R01869 RC00051 ko00000,ko00001,ko00002,ko01000 Bacteria 1TPFV@1239,4HBFE@91061,COG0167@1,COG0167@2 NA|NA|NA F Catalyzes the conversion of dihydroorotate to orotate IIAPBPCI_01790 264199.stu1209 2.8e-39 167.5 Bacilli hup ko:K03530 ko00000,ko03032,ko03036,ko03400 Bacteria 1V9XQ@1239,4HKF2@91061,COG0776@1,COG0776@2 NA|NA|NA L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions IIAPBPCI_01791 264199.stu1210 1.7e-94 352.1 Bacilli ypmS Bacteria 1VF0K@1239,4HIYN@91061,COG4698@1,COG4698@2 NA|NA|NA S Protein conserved in bacteria IIAPBPCI_01792 264199.stu1211 6.7e-87 326.6 Bacteria ypmR GO:0003674,GO:0003824,GO:0004620,GO:0004622,GO:0016298,GO:0016787,GO:0016788,GO:0052689 Bacteria COG2755@1,COG2755@2 NA|NA|NA E lipolytic protein G-D-S-L family IIAPBPCI_01793 1046629.Ssal_01285 3.8e-45 187.6 Bacilli ypmR GO:0003674,GO:0003824,GO:0004620,GO:0004622,GO:0016298,GO:0016787,GO:0016788,GO:0052689 Bacteria 1V1HR@1239,4HDXS@91061,COG2755@1,COG2755@2 NA|NA|NA E COG2755 Lysophospholipase L1 and related esterases IIAPBPCI_01794 264199.stu1212 3.3e-147 527.7 Bacilli DegV Bacteria 1TRZ4@1239,4HBR8@91061,COG1307@1,COG1307@2 NA|NA|NA S DegV family IIAPBPCI_01795 322159.STER_1179 2.9e-304 1050.4 Bacilli recN GO:0000724,GO:0000725,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0008152,GO:0009295,GO:0009314,GO:0009432,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0030312,GO:0031668,GO:0033554,GO:0034641,GO:0042802,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043590,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071496,GO:0071704,GO:0071944,GO:0090304,GO:1901360 ko:K03631,ko:K13582 ko04112,map04112 ko00000,ko00001,ko03400 Bacteria 1TP99@1239,4H9ZR@91061,COG0497@1,COG0497@2 NA|NA|NA L May be involved in recombinational repair of damaged DNA IIAPBPCI_01796 322159.STER_1180 3.7e-73 280.8 Bacilli argR GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0006355,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0019219,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032991,GO:0032993,GO:0043565,GO:0044212,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:2000112,GO:2001141 ko:K03402 ko00000,ko03000 Bacteria 1V1R7@1239,4HFY8@91061,COG1438@1,COG1438@2 NA|NA|NA K Regulates arginine biosynthesis genes IIAPBPCI_01797 264199.stu1215 4.7e-157 560.5 Bacilli rrmJ 2.1.1.226,2.1.1.227 ko:K06442 ko00000,ko01000,ko03009 Bacteria 1TPE4@1239,4HAPY@91061,COG1189@1,COG1189@2 NA|NA|NA J Ribosomal RNA large subunit methyltransferase J IIAPBPCI_01798 264199.stu1216 6.6e-159 566.6 Bacilli ispA GO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044464,GO:0071704,GO:1901576 2.5.1.1,2.5.1.10,2.5.1.29,2.5.1.90 ko:K00795,ko:K02523,ko:K13789 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 M00364,M00366 R01658,R02003,R02061,R09248 RC00279 ko00000,ko00001,ko00002,ko01000,ko01006 Bacteria 1TPQY@1239,4HA8E@91061,COG0142@1,COG0142@2 NA|NA|NA H Belongs to the FPP GGPP synthase family IIAPBPCI_01799 264199.stu1217 3.5e-29 133.7 Bacteria xseB 3.1.11.6 ko:K03602 ko03430,map03430 ko00000,ko00001,ko01000,ko03400 Bacteria COG1722@1,COG1722@2 NA|NA|NA L exodeoxyribonuclease VII activity IIAPBPCI_01800 264199.stu1218 2.6e-247 860.9 Bacilli xseA 3.1.11.6 ko:K03601 ko03430,map03430 ko00000,ko00001,ko01000,ko03400 Bacteria 1TP4E@1239,4HAN2@91061,COG1570@1,COG1570@2 NA|NA|NA L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides IIAPBPCI_01801 1198676.SMUGS5_04945 2.5e-07 62.4 Bacteria Bacteria COG4640@1,COG4640@2 NA|NA|NA KT response to antibiotic IIAPBPCI_01803 264199.stu1220 3.4e-120 437.6 Bacilli nth 4.2.99.18 ko:K10773 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Bacteria 1TRAK@1239,4HATD@91061,COG0177@1,COG0177@2 NA|NA|NA L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate IIAPBPCI_01804 264199.stu1221 1.5e-124 452.2 Bacteria dnaD ko:K02086 ko00000 Bacteria COG3935@1,COG3935@2 NA|NA|NA IIAPBPCI_01805 322159.STER_1189 1.3e-181 642.1 Bacilli metA GO:0003674,GO:0003824,GO:0008374,GO:0008899,GO:0016740,GO:0016746,GO:0016747,GO:0016748,GO:0016750 2.3.1.46 ko:K00651 ko00270,ko00920,ko01100,ko01110,ko01230,map00270,map00920,map01100,map01110,map01230 M00017 R01777 RC00004,RC00041 ko00000,ko00001,ko00002,ko01000 Bacteria 1TQVR@1239,4H9W4@91061,COG1897@1,COG1897@2 NA|NA|NA E Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine IIAPBPCI_01806 264199.stu1223 2e-94 351.7 Bacilli apt GO:0003674,GO:0003824,GO:0003999,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006144,GO:0006168,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009113,GO:0009987,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0034641,GO:0034654,GO:0042440,GO:0043094,GO:0043096,GO:0043101,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046083,GO:0046084,GO:0046112,GO:0046148,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.4.2.22,2.4.2.7 ko:K00759,ko:K03816,ko:K09685 ko00230,ko01100,ko01110,map00230,map01100,map01110 R00190,R01229,R02142,R04378 RC00063,RC00122 ko00000,ko00001,ko01000,ko03000,ko04147 Bacteria 1V1BV@1239,4HFUA@91061,COG0503@1,COG0503@2 NA|NA|NA F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis IIAPBPCI_01807 322159.STER_1191 0.0 1439.5 Bacilli recJ ko:K07462 ko03410,ko03430,ko03440,map03410,map03430,map03440 ko00000,ko00001,ko01000,ko03400 Bacteria 1TPXE@1239,4H9UP@91061,COG0608@1,COG0608@2,COG4199@1,COG4199@2 NA|NA|NA L Single-strand DNA-specific exonuclease, C terminal domain IIAPBPCI_01808 322159.STER_1192 1.5e-138 498.8 Bacilli XK27_05435 1.1.1.100 ko:K00059,ko:K07124 ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212 M00083,M00572 R04533,R04534,R04536,R04543,R04566,R04953,R04964,R07759,R07763,R10116,R10120,R11671 RC00029,RC00117 ko00000,ko00001,ko00002,ko01000,ko01004 Bacteria 1TSJ3@1239,4HDU5@91061,COG0300@1,COG0300@2 NA|NA|NA S Belongs to the short-chain dehydrogenases reductases (SDR) family IIAPBPCI_01809 264199.stu1226 9.2e-175 619.4 Bacilli rnz GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004527,GO:0004532,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016796,GO:0016891,GO:0016893,GO:0016896,GO:0031123,GO:0034414,GO:0034470,GO:0034641,GO:0034660,GO:0042779,GO:0042780,GO:0042781,GO:0043167,GO:0043169,GO:0043170,GO:0043628,GO:0044237,GO:0044238,GO:0046483,GO:0046872,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0090503,GO:0140098,GO:1901360,GO:1905267 3.1.26.11 ko:K00784 ko03013,map03013 ko00000,ko00001,ko01000,ko03016 Bacteria 1TRGP@1239,4HABM@91061,COG1234@1,COG1234@2 NA|NA|NA S Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA IIAPBPCI_01810 264199.stu1227 3.9e-116 424.1 Bacilli galT 2.7.7.12 ko:K00965 ko00052,ko00520,ko01100,ko04917,map00052,map00520,map01100,map04917 M00362,M00554,M00632 R00955 RC00002 ko00000,ko00001,ko00002,ko01000 Bacteria 1VY8D@1239,4HXPD@91061,COG4468@1,COG4468@2 NA|NA|NA G UDPglucose--hexose-1-phosphate uridylyltransferase IIAPBPCI_01811 264199.stu1228 2.7e-222 777.7 Bacilli hflX GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0043021,GO:0043022,GO:0044424,GO:0044464,GO:0044877 ko:K03665 ko00000,ko03009 Bacteria 1TNZB@1239,4HACA@91061,COG2262@1,COG2262@2 NA|NA|NA S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis IIAPBPCI_01812 322159.STER_1197 7.3e-232 809.7 Bacilli rodA ko:K05837 ko00000,ko03036 Bacteria 1TPGH@1239,4HAV4@91061,COG0772@1,COG0772@2 NA|NA|NA D Belongs to the SEDS family IIAPBPCI_01813 1046629.Ssal_01315 2e-49 201.4 Bacteria hisE GO:0000105,GO:0000287,GO:0003674,GO:0003824,GO:0004636,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009605,GO:0009607,GO:0009987,GO:0016053,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019752,GO:0030312,GO:0034641,GO:0040007,GO:0043167,GO:0043169,GO:0043207,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044403,GO:0044419,GO:0044464,GO:0046394,GO:0046483,GO:0046872,GO:0050896,GO:0051701,GO:0051704,GO:0051707,GO:0052803,GO:0071704,GO:0071944,GO:0075136,GO:0075139,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 3.5.4.19,3.6.1.31,5.3.1.16 ko:K01523,ko:K01814,ko:K11755 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 M00026 R04035,R04037,R04640 RC00002,RC00945,RC01055 ko00000,ko00001,ko00002,ko01000 iSB619.SA_RS14110,iYO844.BSU34860 Bacteria COG0140@1,COG0140@2 NA|NA|NA E phosphoribosyl-ATP diphosphatase activity IIAPBPCI_01814 322159.STER_1199 8e-60 236.1 Bacilli hisI GO:0000105,GO:0003674,GO:0003824,GO:0004635,GO:0004636,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016462,GO:0016787,GO:0016810,GO:0016814,GO:0016817,GO:0016818,GO:0018130,GO:0019238,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 3.5.4.19,3.5.4.25,3.6.1.31,5.3.1.16 ko:K01496,ko:K01497,ko:K01814,ko:K11755 ko00340,ko00740,ko00790,ko01100,ko01110,ko01230,ko02024,map00340,map00740,map00790,map01100,map01110,map01230,map02024 M00026,M00125 R00425,R04035,R04037,R04640 RC00002,RC00293,RC00945,RC01055,RC02504 ko00000,ko00001,ko00002,ko01000 iECNA114_1301.ECNA114_0880,iECW_1372.ECW_m2186,iEKO11_1354.EKO11_1768,iHN637.CLJU_RS05760,iSB619.SA_RS14110,iUMN146_1321.UM146_06665,iWFL_1372.ECW_m2186 Bacteria 1UYNA@1239,4HA9R@91061,COG0139@1,COG0139@2 NA|NA|NA E Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP IIAPBPCI_01815 322159.STER_1200 8.9e-136 489.6 Bacilli hisF GO:0000105,GO:0000107,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009382,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0032991,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494,GO:1990234 3.5.4.19,3.6.1.31 ko:K01663,ko:K02500,ko:K11755 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 M00026 R04035,R04037,R04558 RC00002,RC00010,RC01055,RC01190,RC01943 ko00000,ko00001,ko00002,ko01000 iECO111_1330.ECO111_2749,iEcolC_1368.EcolC_1617,iHN637.CLJU_RS05755,iLJ478.TM1036,iSB619.SA_RS14115,iYL1228.KPN_02481 Bacteria 1TP0W@1239,4HAAM@91061,COG0107@1,COG0107@2 NA|NA|NA E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit IIAPBPCI_01816 322159.STER_1201 1.9e-127 461.8 Bacilli hisA GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.16 ko:K01814 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 M00026 R04640 RC00945 ko00000,ko00001,ko00002,ko01000 iAF987.Gmet_0388 Bacteria 1V1IR@1239,4HACP@91061,COG0106@1,COG0106@2 NA|NA|NA E 1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase IIAPBPCI_01817 322159.STER_1202 9.8e-109 399.4 Bacilli hisH ko:K02501 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 M00026 R04558 RC00010,RC01190,RC01943 ko00000,ko00001,ko00002,ko01000 Bacteria 1TQT0@1239,4HHNQ@91061,COG0118@1,COG0118@2 NA|NA|NA E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR IIAPBPCI_01818 322159.STER_1203 1.5e-106 392.1 Bacilli hisB GO:0000105,GO:0003674,GO:0003824,GO:0004401,GO:0004424,GO:0005488,GO:0005515,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0040007,GO:0042578,GO:0042802,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.23,2.6.1.9,3.1.3.15,4.2.1.19 ko:K00013,ko:K00817,ko:K01089,ko:K01693 ko00340,ko00350,ko00360,ko00400,ko00401,ko00960,ko01100,ko01110,ko01130,ko01230,map00340,map00350,map00360,map00400,map00401,map00960,map01100,map01110,map01130,map01230 M00026 R00694,R00734,R01158,R01163,R03012,R03013,R03243,R03457 RC00006,RC00017,RC00099,RC00242,RC00463,RC00888,RC00932 ko00000,ko00001,ko00002,ko01000,ko01007 iECO111_1330.ECO111_2746,iECS88_1305.ECS88_2121,iJN746.PP_0289,iLJ478.TM1039,iSB619.SA_RS14130,iUMNK88_1353.UMNK88_2570 Bacteria 1TRH7@1239,4HCFG@91061,COG0131@1,COG0131@2 NA|NA|NA E imidazoleglycerol-phosphate dehydratase IIAPBPCI_01819 322159.STER_1204 7.8e-233 812.8 Bacilli hisD GO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019752,GO:0030145,GO:0034641,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046872,GO:0046914,GO:0052803,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.23,1.1.1.308 ko:K00013,ko:K15509 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 M00026 R01158,R01163,R03012 RC00099,RC00242,RC00463 ko00000,ko00001,ko00002,ko01000 Bacteria 1TPAW@1239,4H9XK@91061,COG0141@1,COG0141@2 NA|NA|NA E Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine IIAPBPCI_01820 322159.STER_1205 4e-116 424.1 Bacilli hisG GO:0000105,GO:0003674,GO:0003824,GO:0003879,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.17 ko:K00765,ko:K02502 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 M00026 R01071 RC02819,RC03200 ko00000,ko00001,ko00002,ko01000 Bacteria 1TSVZ@1239,4H9MH@91061,COG0040@1,COG0040@2 NA|NA|NA E Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity IIAPBPCI_01821 322159.STER_1206 5.7e-183 646.7 Bacilli hisZ 2.4.2.17,6.1.1.21 ko:K00765,ko:K01892,ko:K02502 ko00340,ko00970,ko01100,ko01110,ko01230,map00340,map00970,map01100,map01110,map01230 M00026,M00359,M00360 R01071,R03655 RC00055,RC00523,RC02819,RC03200 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Bacteria 1TPZZ@1239,4HBBA@91061,COG3705@1,COG3705@2 NA|NA|NA E Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine IIAPBPCI_01822 322159.STER_1207 8.2e-196 689.5 Bacilli hisC 2.6.1.9 ko:K00817 ko00340,ko00350,ko00360,ko00400,ko00401,ko00960,ko01100,ko01110,ko01130,ko01230,map00340,map00350,map00360,map00400,map00401,map00960,map01100,map01110,map01130,map01230 M00026 R00694,R00734,R03243 RC00006,RC00888 ko00000,ko00001,ko00002,ko01000,ko01007 iJN678.hisC Bacteria 1TPUV@1239,4HA1H@91061,COG0079@1,COG0079@2 NA|NA|NA E Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily IIAPBPCI_01824 1161413.HMPREF1510_1836 1.3e-31 141.7 Firmicutes ko:K07497 ko00000 Bacteria 1TQQY@1239,COG2801@1,COG2801@2 NA|NA|NA L Integrase core domain protein IIAPBPCI_01825 264199.stu0206 4.5e-09 65.9 Bacteria ko:K07497 ko00000 Bacteria COG2801@1,COG2801@2 NA|NA|NA L transposition IIAPBPCI_01826 322159.STER_0016 7.4e-83 313.5 Firmicutes ko:K07483 ko00000 Bacteria 1W68S@1239,COG2963@1,COG2963@2 NA|NA|NA L Transposase IIAPBPCI_01827 435842.HMPREF0848_00449 2e-31 141.4 Firmicutes XK27_08085 Bacteria 1VM50@1239,2EJUK@1,33DJ8@2 NA|NA|NA IIAPBPCI_01828 322159.STER_1210 8.4e-88 329.7 Bacilli XK27_08080 3.1.1.53 ko:K05970 ko00000,ko01000 Bacteria 1TR6Z@1239,4HGB0@91061,COG4632@1,COG4632@2 NA|NA|NA G Exopolysaccharide biosynthesis protein IIAPBPCI_01829 1046629.Ssal_01327 7.9e-10 69.3 Bacilli XK27_08080 3.1.1.53 ko:K05970 ko00000,ko01000 Bacteria 1TR6Z@1239,4HGB0@91061,COG4632@1,COG4632@2 NA|NA|NA G Exopolysaccharide biosynthesis protein IIAPBPCI_01830 322159.STER_1212 5.8e-140 503.4 Bacilli hisK 3.1.3.15 ko:K04486 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 M00026 R03013 RC00017 ko00000,ko00001,ko00002,ko01000 Bacteria 1V77D@1239,4HGYX@91061,COG1387@1,COG1387@2 NA|NA|NA E Histidinol phosphatase and related hydrolases of the PHP family IIAPBPCI_01831 322159.STER_1213 5.8e-120 436.8 Bacilli ylfI Bacteria 1VGZ1@1239,4HNTM@91061,COG4478@1,COG4478@2 NA|NA|NA S tigr01906 IIAPBPCI_01832 322159.STER_1214 5.9e-143 513.5 Bacilli nagD 2.7.1.25,3.1.3.41 ko:K00860,ko:K01101 ko00230,ko00627,ko00920,ko01100,ko01120,map00230,map00627,map00920,map01100,map01120 M00176 R00509,R03024,R04928 RC00002,RC00078,RC00151 ko00000,ko00001,ko00002,ko01000 Bacteria 1TQGM@1239,4HA3R@91061,COG0647@1,COG0647@2 NA|NA|NA G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro IIAPBPCI_01833 264199.stu1235 5.7e-143 513.5 Bacilli fat 3.1.2.21 ko:K01071 ko00061,ko01100,map00061,map01100 R04014,R08157,R08158 RC00014,RC00039 ko00000,ko00001,ko01000,ko01004 Bacteria 1V3RB@1239,4HHJ4@91061,COG3884@1,COG3884@2 NA|NA|NA I Acyl-ACP thioesterase IIAPBPCI_01834 264199.stu1236 6.9e-217 759.6 Bacilli hemN GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 Bacteria 1TPES@1239,4HA60@91061,COG0635@1,COG0635@2 NA|NA|NA H Involved in the biosynthesis of porphyrin-containing compound IIAPBPCI_01835 322159.STER_0367 1.8e-220 771.5 Bacilli Bacteria 1TP4C@1239,4HAXJ@91061,COG3328@1,COG3328@2 NA|NA|NA L Transposase IIAPBPCI_01838 264199.stu1242 5.6e-205 719.9 Bacilli rfbB GO:0000271,GO:0003674,GO:0003824,GO:0005975,GO:0005976,GO:0008150,GO:0008152,GO:0008460,GO:0009058,GO:0009059,GO:0009987,GO:0016051,GO:0016829,GO:0016835,GO:0016836,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0045226,GO:0046379,GO:0071704,GO:1901576 4.2.1.46 ko:K01710 ko00521,ko00523,ko00525,ko01055,ko01130,map00521,map00523,map00525,map01055,map01130 M00793 R06513 RC00402 ko00000,ko00001,ko00002,ko01000 Bacteria 1TPWM@1239,4HA3Y@91061,COG1088@1,COG1088@2 NA|NA|NA M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily IIAPBPCI_01839 264199.stu1243 2.7e-111 407.9 Bacilli rmlC 1.1.1.133,5.1.3.13 ko:K00067,ko:K01790 ko00521,ko00523,ko01130,map00521,map00523,map01130 M00793 R02777,R06514 RC00182,RC01531 ko00000,ko00001,ko00002,ko01000 Bacteria 1TRVB@1239,4HFQB@91061,COG1898@1,COG1898@2 NA|NA|NA M Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose IIAPBPCI_01840 264199.stu1244 5.4e-161 573.5 Bacilli rfbA GO:0000271,GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005975,GO:0005976,GO:0005996,GO:0006006,GO:0006139,GO:0006220,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008879,GO:0009058,GO:0009059,GO:0009117,GO:0009141,GO:0009147,GO:0009200,GO:0009211,GO:0009219,GO:0009225,GO:0009226,GO:0009262,GO:0009394,GO:0009987,GO:0016020,GO:0016051,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019299,GO:0019300,GO:0019305,GO:0019318,GO:0019319,GO:0019438,GO:0019637,GO:0019692,GO:0030312,GO:0033692,GO:0034637,GO:0034641,GO:0034645,GO:0034654,GO:0040007,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044271,GO:0044281,GO:0044283,GO:0044464,GO:0045226,GO:0046075,GO:0046364,GO:0046379,GO:0046383,GO:0046483,GO:0046872,GO:0055086,GO:0071704,GO:0071944,GO:0072527,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901576 2.7.7.24 ko:K00973 ko00521,ko00523,ko00525,ko01130,map00521,map00523,map00525,map01130 M00793 R02328 RC00002 ko00000,ko00001,ko00002,ko01000 iNJ661.Rv0334 Bacteria 1V301@1239,4H9R0@91061,COG1209@1,COG1209@2 NA|NA|NA M Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis IIAPBPCI_01841 264199.stu1245 1.7e-204 718.4 Bacilli yurR GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0016491,GO:0044424,GO:0044464,GO:0055114 1.4.5.1 ko:K00285 ko00360,map00360 R01374,R09493 RC00006,RC00025 ko00000,ko00001,ko01000 Bacteria 1TQTF@1239,4HA0F@91061,COG0665@1,COG0665@2 NA|NA|NA E oxidoreductase IIAPBPCI_01842 1046629.Ssal_01342 1.6e-101 375.6 Bacilli zupT ko:K07238 ko00000,ko02000 2.A.5.5 Bacteria 1TP7J@1239,4HB3R@91061,COG0428@1,COG0428@2 NA|NA|NA P Mediates zinc uptake. May also transport other divalent cations IIAPBPCI_01843 1046629.Ssal_01342 7e-22 109.4 Bacilli zupT ko:K07238 ko00000,ko02000 2.A.5.5 Bacteria 1TP7J@1239,4HB3R@91061,COG0428@1,COG0428@2 NA|NA|NA P Mediates zinc uptake. May also transport other divalent cations IIAPBPCI_01844 264199.stu1248 9.6e-149 532.7 Bacilli yqfO GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 3.5.4.16 ko:K22391 ko00790,ko01100,map00790,map01100 M00126 R00428,R04639,R05046,R05048 RC00263,RC00294,RC00323,RC00945,RC01188 ko00000,ko00001,ko00002,ko01000 Bacteria 1TQ27@1239,4H9NY@91061,COG0327@1,COG0327@2 NA|NA|NA S Belongs to the GTP cyclohydrolase I type 2 NIF3 family IIAPBPCI_01845 264199.stu1249 3.5e-123 447.6 Bacilli trmK GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016426,GO:0016429,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.217 ko:K06967 ko00000,ko01000,ko03016 Bacteria 1V3I4@1239,4HHIM@91061,COG2384@1,COG2384@2 NA|NA|NA S SAM-dependent methyltransferase IIAPBPCI_01846 264199.stu1250 1.3e-70 272.3 Bacilli gtrA GO:0000166,GO:0003674,GO:0003824,GO:0003870,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0008883,GO:0009058,GO:0009987,GO:0016020,GO:0016410,GO:0016491,GO:0016620,GO:0016740,GO:0016746,GO:0016747,GO:0016748,GO:0016749,GO:0016903,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0036094,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044464,GO:0046148,GO:0046483,GO:0048037,GO:0050661,GO:0050662,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:0071944,GO:0097159,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 Bacteria 1VMS6@1239,4HNB7@91061,COG2246@1,COG2246@2 NA|NA|NA S GtrA-like protein IIAPBPCI_01847 264199.stu1251 8.2e-249 865.9 Bacilli glmM GO:0003674,GO:0003824,GO:0004614,GO:0004615,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006040,GO:0006047,GO:0006048,GO:0006139,GO:0006464,GO:0006468,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008966,GO:0009058,GO:0009225,GO:0009226,GO:0009987,GO:0016310,GO:0016853,GO:0016866,GO:0016868,GO:0018130,GO:0019438,GO:0019538,GO:0034641,GO:0034654,GO:0036211,GO:0040007,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046349,GO:0046483,GO:0046777,GO:0055086,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901576 5.4.2.10 ko:K03431 ko00520,ko01100,ko01130,map00520,map01100,map01130 R02060 RC00408 ko00000,ko00001,ko01000 iSB619.SA_RS11275,iSBO_1134.SBO_3206 Bacteria 1TP1X@1239,4HB16@91061,COG1109@1,COG1109@2 NA|NA|NA G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate IIAPBPCI_01848 322159.STER_1231 4.3e-167 594.0 Bacilli ybbR GO:0008150,GO:0031279,GO:0031281,GO:0043085,GO:0044093,GO:0045761,GO:0045762,GO:0050790,GO:0051339,GO:0051349,GO:0065007,GO:0065009 Bacteria 1TSIV@1239,4HD8Y@91061,COG4856@1,COG4856@2 NA|NA|NA S Protein conserved in bacteria IIAPBPCI_01849 264199.stu1253 2.8e-123 448.0 Bacilli dacA GO:0003674,GO:0003824,GO:0004016,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0009975,GO:0016020,GO:0016021,GO:0016829,GO:0016849,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 2.7.7.85 ko:K18672 ko00000,ko01000 Bacteria 1TPRW@1239,4H9XZ@91061,COG1624@1,COG1624@2 NA|NA|NA S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria IIAPBPCI_01850 264199.stu1254 1.8e-253 881.3 Bacilli murD 3.4.21.10,6.3.2.13,6.3.2.9 ko:K01317,ko:K01925,ko:K01928,ko:K01932 ko00300,ko00471,ko00550,ko01100,map00300,map00471,map00550,map01100 R02783,R02788 RC00064,RC00090,RC00141 ko00000,ko00001,ko01000,ko01002,ko01011,ko04131 Bacteria 1UHPI@1239,4HVP0@91061,COG0771@1,COG0771@2 NA|NA|NA M Mur ligase, middle domain protein IIAPBPCI_01851 264199.stu1255 3.3e-149 534.3 Bacilli cobQ ko:K07009 ko00000 Bacteria 1U7I9@1239,4HD1P@91061,COG3442@1,COG3442@2 NA|NA|NA S glutamine amidotransferase IIAPBPCI_01852 264199.stu1256 0.0 1646.3 Bacilli mprF GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 2.3.2.3 ko:K07027,ko:K14205 ko01503,ko02020,ko05150,map01503,map02020,map05150 M00726 ko00000,ko00001,ko00002,ko01000,ko01504,ko02000 2.A.1.3.37,4.D.2 iYO844.BG12900 Bacteria 1TQI2@1239,4HBHU@91061,COG0392@1,COG0392@2,COG2898@1,COG2898@2 NA|NA|NA J Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms IIAPBPCI_01853 264199.stu1257 3.1e-130 471.1 Bacilli pip 1.11.1.10 ko:K00433 ko00000,ko01000 Bacteria 1V02M@1239,4HN2K@91061,COG0596@1,COG0596@2 NA|NA|NA S Alpha beta hydrolase IIAPBPCI_01855 264199.stu1259 0.0 1203.3 Bacilli uup ko:K06158 ko00000,ko03012 Bacteria 1TPAX@1239,4HBVV@91061,COG0488@1,COG0488@2 NA|NA|NA S abc transporter atp-binding protein IIAPBPCI_01856 264199.stu1260 6.2e-114 416.8 Bacilli udk GO:0003674,GO:0003824,GO:0004849,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006213,GO:0006220,GO:0006221,GO:0006222,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008655,GO:0009058,GO:0009112,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009173,GO:0009174,GO:0009218,GO:0009220,GO:0009224,GO:0009259,GO:0009260,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0043094,GO:0043097,GO:0043174,GO:0043771,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046035,GO:0046049,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.7.1.48 ko:K00876 ko00240,ko00983,ko01100,map00240,map00983,map01100 R00513,R00516,R00517,R00962,R00964,R00967,R00968,R00970,R01548,R01549,R01880,R02091,R02096,R02097,R02327,R02332,R02371,R02372,R08232 RC00002,RC00017 ko00000,ko00001,ko01000 iSBO_1134.SBO_0893 Bacteria 1TQ4V@1239,4HAVR@91061,COG0572@1,COG0572@2 NA|NA|NA F Cytidine monophosphokinase IIAPBPCI_01857 322159.STER_1239 1.5e-176 625.5 Bacilli yfmL GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006807,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009987,GO:0010501,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070035,GO:0071704,GO:0090304,GO:0140098,GO:1901360 3.6.4.13 ko:K05592,ko:K18692 ko03018,map03018 ko00000,ko00001,ko01000,ko03009,ko03019 Bacteria 1TQ9R@1239,4HANR@91061,COG0513@1,COG0513@2 NA|NA|NA L DEAD DEAH box helicase IIAPBPCI_01858 322159.STER_1240 4.8e-28 129.8 Bacteria 6.3.2.2,6.3.2.4 ko:K01919,ko:K01921 ko00270,ko00473,ko00480,ko00550,ko01100,ko01502,map00270,map00473,map00480,map00550,map01100,map01502 M00118 R00894,R01150,R10993 RC00064,RC00090,RC00141 ko00000,ko00001,ko00002,ko01000,ko01011 Bacteria COG1181@1,COG1181@2 NA|NA|NA F Belongs to the D-alanine--D-alanine ligase family IIAPBPCI_01859 264199.stu1263 1.9e-264 917.9 Bacilli gapN GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0043891,GO:0047100,GO:0055114 1.2.1.9 ko:K00131 ko00010,ko00030,ko01100,ko01120,ko01200,map00010,map00030,map01100,map01120,map01200 M00308,M00633 R01058 RC00242 ko00000,ko00001,ko00002,ko01000 Bacteria 1TP4S@1239,4H9MF@91061,COG1012@1,COG1012@2 NA|NA|NA C Belongs to the aldehyde dehydrogenase family IIAPBPCI_01860 264199.stu1264 0.0 1087.4 Bacilli ptsI GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006810,GO:0008150,GO:0008643,GO:0008965,GO:0009401,GO:0016740,GO:0016772,GO:0016775,GO:0019197,GO:0032991,GO:0042802,GO:0043167,GO:0043169,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0051179,GO:0051234,GO:0071702 2.7.3.9 ko:K08483 ko02060,map02060 ko00000,ko00001,ko01000,ko02000 8.A.7 iB21_1397.B21_02277,iE2348C_1286.E2348C_2602,iEC042_1314.EC042_2625,iECBD_1354.ECBD_1265,iECB_1328.ECB_02316,iECD_1391.ECD_02316,iECH74115_1262.ECH74115_3647,iECIAI1_1343.ECIAI1_2474,iECIAI39_1322.ECIAI39_2562,iECO103_1326.ECO103_2935,iECO111_1330.ECO111_3146,iECO26_1355.ECO26_3469,iECP_1309.ECP_2440,iECSE_1348.ECSE_2707,iECSP_1301.ECSP_3364,iECUMN_1333.ECUMN_2738,iECW_1372.ECW_m2645,iECs_1301.ECs3288,iEKO11_1354.EKO11_1312,iEcE24377_1341.EcE24377A_2703,iEcHS_1320.EcHS_A2551,iEcSMS35_1347.EcSMS35_2571,iEcolC_1368.EcolC_1262,iLF82_1304.LF82_1770,iNRG857_1313.NRG857_12115,iSBO_1134.SBO_2440,iSDY_1059.SDY_2613,iSFV_1184.SFV_2468,iSF_1195.SF2471,iSFxv_1172.SFxv_2720,iSSON_1240.SSON_2505,iS_1188.S2617,iUMNK88_1353.UMNK88_3018,iWFL_1372.ECW_m2645,iZ_1308.Z3682 Bacteria 1TPK8@1239,4H9VD@91061,COG1080@1,COG1080@2 NA|NA|NA G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) IIAPBPCI_01861 264199.stu1265 7.9e-39 166.0 Bacilli ptsH GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0043610,GO:0044424,GO:0044464,GO:0050789,GO:0065007 ko:K11189 ko00000,ko02000 4.A.2.1 Bacteria 1VA0R@1239,4HKGA@91061,COG1925@1,COG1925@2 NA|NA|NA G phosphocarrier protein Hpr IIAPBPCI_01862 264199.stu1266 8.2e-221 772.7 Bacilli icd GO:0003674,GO:0003824,GO:0003862,GO:0004448,GO:0004450,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006091,GO:0006520,GO:0006551,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0022900,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0050896,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.42 ko:K00031 ko00020,ko00480,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,ko04146,map00020,map00480,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230,map04146 M00009,M00010,M00173,M00740 R00267,R00268,R01899 RC00001,RC00084,RC00114,RC00626,RC02801 br01601,ko00000,ko00001,ko00002,ko01000 e_coli_core.b1136,iAF1260.b1136,iECDH1ME8569_1439.ECDH1ME8569_1071,iEcDH1_1363.EcDH1_2511,iJN746.PP_4011,iJO1366.b1136,iJR904.b1136,iY75_1357.Y75_RS05930,iYL1228.KPN_01144 Bacteria 1UHPE@1239,4H9US@91061,COG0538@1,COG0538@2 NA|NA|NA C Isocitrate dehydrogenase IIAPBPCI_01863 264199.stu1267 5.1e-212 743.4 Bacilli citZ 2.3.3.1 ko:K01647 ko00020,ko00630,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map01100,map01110,map01120,map01130,map01200,map01210,map01230 M00009,M00010,M00012,M00740 R00351 RC00004,RC00067 br01601,ko00000,ko00001,ko00002,ko01000 Bacteria 1TPPS@1239,4H9YE@91061,COG0372@1,COG0372@2 NA|NA|NA C Belongs to the citrate synthase family IIAPBPCI_01864 264199.stu1268 0.0 1746.9 Bacilli acnA GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003730,GO:0003824,GO:0003994,GO:0005488,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016829,GO:0016835,GO:0016836,GO:0016999,GO:0017144,GO:0019541,GO:0019679,GO:0019752,GO:0032787,GO:0043436,GO:0043937,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0045333,GO:0046459,GO:0047456,GO:0048037,GO:0050789,GO:0050793,GO:0051536,GO:0051539,GO:0051540,GO:0055114,GO:0065007,GO:0071704,GO:0072350,GO:0097159,GO:1901363 4.2.1.3 ko:K01681 ko00020,ko00630,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230 M00009,M00010,M00012,M00173,M00740 R01324,R01325,R01900 RC00497,RC00498,RC00618 br01601,ko00000,ko00001,ko00002,ko01000 iSB619.SA_RS06730 Bacteria 1VTMM@1239,4HB5N@91061,COG1048@1,COG1048@2 NA|NA|NA C Catalyzes the isomerization of citrate to isocitrate via cis-aconitate IIAPBPCI_01865 264199.stu1269 8.5e-34 149.1 Bacilli nrdH GO:0003674,GO:0003824,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009893,GO:0009987,GO:0016491,GO:0019222,GO:0019725,GO:0022900,GO:0042592,GO:0043085,GO:0044093,GO:0044237,GO:0045454,GO:0048518,GO:0050789,GO:0050790,GO:0050794,GO:0051341,GO:0051353,GO:0055114,GO:0065007,GO:0065008,GO:0065009 ko:K06191 ko00000 Bacteria 1VEFX@1239,4HNUX@91061,COG0695@1,COG0695@2 NA|NA|NA O Glutaredoxin IIAPBPCI_01866 264199.stu1270 0.0 1439.5 Bacilli nrdE 1.17.4.1 ko:K00525 ko00230,ko00240,ko01100,map00230,map00240,map01100 M00053 R02017,R02018,R02019,R02024 RC00613 ko00000,ko00001,ko00002,ko01000,ko03400 iYO844.BSU17380 Bacteria 1TPFH@1239,4H9X0@91061,COG0209@1,COG0209@2 NA|NA|NA F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides IIAPBPCI_01867 264199.stu1271 8.6e-184 649.4 Bacilli nrdF 1.17.4.1 ko:K00526 ko00230,ko00240,ko01100,map00230,map00240,map01100 M00053 R02017,R02018,R02019,R02024 RC00613 ko00000,ko00001,ko00002,ko01000,ko03400 Bacteria 1TQTH@1239,4H9WX@91061,COG0208@1,COG0208@2 NA|NA|NA F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides IIAPBPCI_01869 264199.stu1273 4.2e-71 273.9 Bacteria Bacteria COG3547@1,COG3547@2 NA|NA|NA L Transposase (IS116 IS110 IS902 family) IIAPBPCI_01870 264199.stu1274 8.8e-60 236.1 Bacteria Bacteria COG3547@1,COG3547@2 NA|NA|NA L Transposase (IS116 IS110 IS902 family) IIAPBPCI_01871 264199.stu1275 5.3e-165 587.0 Bacilli ypuA Bacteria 1TR2I@1239,4HBVZ@91061,COG4086@1,COG4086@2 NA|NA|NA S secreted protein IIAPBPCI_01872 264199.stu1276 1.5e-52 211.8 Firmicutes yaeR ko:K08234 ko00000 Bacteria 1V6XU@1239,COG0346@1,COG0346@2 NA|NA|NA E COG0346 LactoylglutaTHIone lyase and related lyases IIAPBPCI_01873 322159.STER_1255 1.6e-132 478.8 Bacilli srtA 3.4.22.70 ko:K07284 ko00000,ko01000,ko01002,ko01011 Bacteria 1V83Z@1239,4HIA0@91061,COG3764@1,COG3764@2 NA|NA|NA M Sortase (surface protein transpeptidase) IIAPBPCI_01874 322159.STER_1256 0.0 1413.3 Bacilli gyrA GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0003916,GO:0003918,GO:0005488,GO:0005524,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006265,GO:0006725,GO:0006807,GO:0006996,GO:0008094,GO:0008144,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016887,GO:0017076,GO:0017111,GO:0030312,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034335,GO:0034641,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044464,GO:0046483,GO:0046872,GO:0051276,GO:0061505,GO:0071103,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0097159,GO:0097367,GO:0140097,GO:1901265,GO:1901360,GO:1901363 5.99.1.3 ko:K02469,ko:K02621 ko00000,ko01000,ko02048,ko03032,ko03036,ko03400 Bacteria 1TP2Z@1239,4HAHY@91061,COG0188@1,COG0188@2 NA|NA|NA L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner IIAPBPCI_01875 264199.stu1280 1.6e-180 638.6 Bacilli ldh 1.1.1.27 ko:K00016 ko00010,ko00270,ko00620,ko00640,ko01100,ko01110,ko01120,ko01130,ko04922,map00010,map00270,map00620,map00640,map01100,map01110,map01120,map01130,map04922 R00703,R01000,R03104 RC00031,RC00044 ko00000,ko00001,ko01000,ko04147 Bacteria 1TPSY@1239,4HB0Z@91061,COG0039@1,COG0039@2 NA|NA|NA C Belongs to the LDH MDH superfamily. LDH family IIAPBPCI_01876 322159.STER_1258 8.3e-257 892.5 Bacilli noxE Bacteria 1TPWW@1239,4H9U7@91061,COG0446@1,COG0446@2 NA|NA|NA P NADH oxidase IIAPBPCI_01877 322159.STER_1259 3.6e-293 1013.4 Bacilli yfmM ko:K06158 ko00000,ko03012 Bacteria 1TPAX@1239,4HC58@91061,COG0488@1,COG0488@2 NA|NA|NA S abc transporter atp-binding protein IIAPBPCI_01878 322159.STER_1260 4.8e-59 233.8 Bacilli XK27_01265 ko:K16923 M00582 ko00000,ko00002,ko02000 3.A.1.28 Bacteria 1VC0F@1239,4HMJM@91061,COG4720@1,COG4720@2 NA|NA|NA S ECF-type riboflavin transporter, S component IIAPBPCI_01879 1116231.SMA_0321 8.1e-182 642.9 Bacilli Bacteria 1TP4C@1239,4HAXJ@91061,COG3328@1,COG3328@2 NA|NA|NA L Transposase IIAPBPCI_01880 322159.STER_1260 1.5e-10 70.9 Bacilli XK27_01265 ko:K16923 M00582 ko00000,ko00002,ko02000 3.A.1.28 Bacteria 1VC0F@1239,4HMJM@91061,COG4720@1,COG4720@2 NA|NA|NA S ECF-type riboflavin transporter, S component IIAPBPCI_01881 264199.stu1284 9.3e-87 326.2 Bacilli pdxK 2.7.1.35 ko:K00868 ko00750,ko01100,map00750,map01100 R00174,R01909,R02493 RC00002,RC00017 ko00000,ko00001,ko01000 Bacteria 1TRCR@1239,4HHME@91061,COG2240@1,COG2240@2 NA|NA|NA H Belongs to the pyridoxine kinase family IIAPBPCI_01882 264199.stu1284 5.5e-42 176.8 Bacilli pdxK 2.7.1.35 ko:K00868 ko00750,ko01100,map00750,map01100 R00174,R01909,R02493 RC00002,RC00017 ko00000,ko00001,ko01000 Bacteria 1TRCR@1239,4HHME@91061,COG2240@1,COG2240@2 NA|NA|NA H Belongs to the pyridoxine kinase family IIAPBPCI_01883 264199.stu1285 2e-86 325.1 Firmicutes Bacteria 1V6QK@1239,COG4720@1,COG4720@2 NA|NA|NA S ECF-type riboflavin transporter, S component IIAPBPCI_01885 322159.STER_1264 7.7e-241 839.3 Bacilli XK27_08130 Bacteria 1TPS5@1239,4HBNK@91061,COG1167@1,COG1167@2 NA|NA|NA K Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs IIAPBPCI_01886 264199.stu1289 2e-55 221.5 Firmicutes nrdD_1 1.1.98.6,1.17.4.1 ko:K00525,ko:K21636 ko00230,ko00240,ko01100,map00230,map00240,map01100 M00053 R02017,R02018,R02019,R02024,R11633,R11634,R11635,R11636 RC00613 ko00000,ko00001,ko00002,ko01000,ko03400 Bacteria 1TT3U@1239,COG0209@1,COG0209@2 NA|NA|NA F Ribonucleoside-triphosphate reductase IIAPBPCI_01888 322159.STER_1267 0.0 1535.0 Bacilli pheT GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0030312,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0040007,GO:0042802,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 ko:K01890,ko:K06878 ko00970,map00970 M00359,M00360 R03660 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 iG2583_1286.G2583_2160,iPC815.YPO2428 Bacteria 1TP98@1239,4HAQ9@91061,COG0072@1,COG0072@2,COG0073@1,COG0073@2 NA|NA|NA J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily IIAPBPCI_01889 264199.stu1293 3.8e-93 347.4 Bacilli paiA 2.3.1.57 ko:K22441 ko00000,ko01000 Bacteria 1VDFK@1239,4HMHW@91061,COG0454@1,COG0456@2 NA|NA|NA K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases IIAPBPCI_01890 264199.stu1294 9.6e-197 692.6 Bacilli pheS GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.20 ko:K01889 ko00970,map00970 M00359,M00360 R03660 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 Bacteria 1TPFW@1239,4HAVN@91061,COG0016@1,COG0016@2 NA|NA|NA J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily IIAPBPCI_01891 264199.stu1295 0.0 1470.3 Bacilli smc ko:K03529 ko00000,ko03036 Bacteria 1TPJV@1239,4HB89@91061,COG1196@1,COG1196@2 NA|NA|NA D Required for chromosome condensation and partitioning IIAPBPCI_01892 264199.stu1296 1.9e-124 451.8 Bacilli rnc GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 ko:K03685 ko03008,ko05205,map03008,map05205 ko00000,ko00001,ko01000,ko03009,ko03019,ko03036 Bacteria 1TPGC@1239,4HAWU@91061,COG0571@1,COG0571@2 NA|NA|NA J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism IIAPBPCI_01893 322159.STER_1273 6.6e-173 613.2 Bacilli dapA 4.3.3.7 ko:K01714 ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230 M00016,M00525,M00526,M00527 R10147 RC03062,RC03063 ko00000,ko00001,ko00002,ko01000 Bacteria 1TPCK@1239,4H9K9@91061,COG0329@1,COG0329@2 NA|NA|NA E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) IIAPBPCI_01894 322159.STER_1274 3.1e-198 697.6 Bacilli asd 1.2.1.11 ko:K00133 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 M00016,M00017,M00018,M00033,M00525,M00526,M00527 R02291 RC00684 ko00000,ko00001,ko00002,ko01000 Bacteria 1TPC6@1239,4HA9H@91061,COG0136@1,COG0136@2 NA|NA|NA E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate IIAPBPCI_01895 322159.STER_1275 1.7e-78 298.5 Bacteria alkD Bacteria COG4912@1,COG4912@2 NA|NA|NA L Dna alkylation repair IIAPBPCI_01896 322159.STER_1276 2.8e-93 347.8 Bacilli pat 2.3.1.183 ko:K03823 ko00440,ko01130,map00440,map01130 R08871,R08938 RC00004,RC00064 ko00000,ko00001,ko01000 Bacteria 1V6X5@1239,4HIP1@91061,COG1247@1,COG1247@2 NA|NA|NA M acetyltransferase IIAPBPCI_01897 1046629.Ssal_00208 1.6e-11 75.1 Firmicutes Bacteria 1TQ93@1239,COG3464@1,COG3464@2 NA|NA|NA L Transposase IIAPBPCI_01898 264199.stu1305 6.4e-276 956.1 Bacilli cls ko:K06131,ko:K06915 ko00564,ko01100,map00564,map01100 R07390 RC00017 ko00000,ko00001,ko01000 Bacteria 1TPKY@1239,4H9TI@91061,COG1502@1,COG1502@2 NA|NA|NA I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol IIAPBPCI_01899 322159.STER_1280 0.0 1182.9 Bacilli uvrC GO:0005575,GO:0005622,GO:0005623,GO:0006950,GO:0006974,GO:0008150,GO:0009380,GO:0009987,GO:0032991,GO:0033554,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:1902494,GO:1905347,GO:1905348,GO:1990391 ko:K03703 ko03420,map03420 ko00000,ko00001,ko03400 Bacteria 1TP4B@1239,4H9QH@91061,COG0322@1,COG0322@2 NA|NA|NA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision IIAPBPCI_01900 264199.stu1307 3.9e-37 160.2 Firmicutes yjjG GO:0003674,GO:0003824,GO:0005488,GO:0006139,GO:0006206,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008252,GO:0008253,GO:0008655,GO:0009058,GO:0009112,GO:0009410,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0018130,GO:0019438,GO:0019856,GO:0019859,GO:0030145,GO:0034641,GO:0034654,GO:0042221,GO:0042578,GO:0043094,GO:0043100,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046112,GO:0046483,GO:0046872,GO:0046914,GO:0050896,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 3.1.3.102,3.1.3.104,3.1.3.5,3.8.1.2 ko:K01560,ko:K07025,ko:K08723,ko:K20862 ko00230,ko00240,ko00361,ko00625,ko00740,ko00760,ko01100,ko01110,ko01120,map00230,map00240,map00361,map00625,map00740,map00760,map01100,map01110,map01120 M00125 R00183,R00511,R00548,R00963,R01126,R01227,R01569,R01664,R01968,R02088,R02102,R02323,R02719,R03346,R05287,R07280 RC00017,RC00697 ko00000,ko00001,ko00002,ko01000 iECNA114_1301.ECNA114_4614 Bacteria 1TWM7@1239,COG1011@1,COG1011@2 NA|NA|NA E hydrolase IIAPBPCI_01901 264199.stu1307 1.5e-21 108.6 Firmicutes yjjG GO:0003674,GO:0003824,GO:0005488,GO:0006139,GO:0006206,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008252,GO:0008253,GO:0008655,GO:0009058,GO:0009112,GO:0009410,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0018130,GO:0019438,GO:0019856,GO:0019859,GO:0030145,GO:0034641,GO:0034654,GO:0042221,GO:0042578,GO:0043094,GO:0043100,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046112,GO:0046483,GO:0046872,GO:0046914,GO:0050896,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 3.1.3.102,3.1.3.104,3.1.3.5,3.8.1.2 ko:K01560,ko:K07025,ko:K08723,ko:K20862 ko00230,ko00240,ko00361,ko00625,ko00740,ko00760,ko01100,ko01110,ko01120,map00230,map00240,map00361,map00625,map00740,map00760,map01100,map01110,map01120 M00125 R00183,R00511,R00548,R00963,R01126,R01227,R01569,R01664,R01968,R02088,R02102,R02323,R02719,R03346,R05287,R07280 RC00017,RC00697 ko00000,ko00001,ko00002,ko01000 iECNA114_1301.ECNA114_4614 Bacteria 1TWM7@1239,COG1011@1,COG1011@2 NA|NA|NA E hydrolase IIAPBPCI_01902 264199.stu1309 4.4e-88 330.9 Bacilli proW ko:K05846 ko02010,map02010 M00209 ko00000,ko00001,ko00002,ko02000 3.A.1.12 Bacteria 1V24D@1239,4IQR7@91061,COG1174@1,COG1174@2 NA|NA|NA P Binding-protein-dependent transport system inner membrane component IIAPBPCI_01903 264199.stu1310 1.6e-137 495.4 Bacilli proV ko:K05847 ko02010,map02010 M00209 ko00000,ko00001,ko00002,ko02000 3.A.1.12 Bacteria 1TPV8@1239,4H9SI@91061,COG1125@1,COG1125@2 NA|NA|NA E abc transporter atp-binding protein IIAPBPCI_01904 264199.stu1311 3.8e-165 587.4 Bacilli proX ko:K05845 ko02010,map02010 M00209 ko00000,ko00001,ko00002,ko02000 3.A.1.12 Bacteria 1TQ7D@1239,4HESS@91061,COG1732@1,COG1732@2 NA|NA|NA M ABC transporter, substrate-binding protein, QAT family IIAPBPCI_01905 264199.stu1312 4.3e-102 377.5 Bacilli proWZ ko:K05846 ko02010,map02010 M00209 ko00000,ko00001,ko00002,ko02000 3.A.1.12 Bacteria 1V41S@1239,4HH8U@91061,COG1174@1,COG1174@2 NA|NA|NA P ABC transporter (Permease IIAPBPCI_01906 264199.stu1313 2.5e-278 964.1 Bacilli hutH 4.3.1.3 ko:K01745 ko00340,ko01100,map00340,map01100 M00045 R01168 RC00361 ko00000,ko00001,ko00002,ko01000 Bacteria 1TPCW@1239,4H9YS@91061,COG2986@1,COG2986@2 NA|NA|NA E Histidine ammonia-lyase IIAPBPCI_01907 264199.stu1314 1.6e-205 721.8 Bacilli ko:K09703 ko00000 Bacteria 1TR39@1239,4HBM2@91061,COG3535@1,COG3535@2 NA|NA|NA S Protein of unknown function (DUF917) IIAPBPCI_01908 264199.stu1315 2.5e-308 1063.9 Bacilli hutU 4.2.1.49 ko:K01712 ko00340,ko01100,map00340,map01100 M00045 R02914 RC00804 ko00000,ko00001,ko00002,ko01000 Bacteria 1TPZ9@1239,4H9NH@91061,COG2987@1,COG2987@2 NA|NA|NA E Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate IIAPBPCI_01909 264199.stu1316 4.6e-59 234.2 Bacilli sdaAB 4.3.1.17 ko:K01752 ko00260,ko00270,ko01100,ko01110,ko01130,ko01200,ko01230,map00260,map00270,map01100,map01110,map01130,map01200,map01230 R00220,R00590 RC00331,RC02600 ko00000,ko00001,ko01000 Bacteria 1U8TZ@1239,4HBD6@91061,COG1760@1,COG1760@2 NA|NA|NA E L-serine dehydratase IIAPBPCI_01910 904306.HMPREF9192_1103 1.3e-100 372.5 Bacilli desR ko:K02479,ko:K07693 ko02020,map02020 M00479 ko00000,ko00001,ko00002,ko02022 Bacteria 1TVTF@1239,4HAJW@91061,COG2197@1,COG2197@2 NA|NA|NA K COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain IIAPBPCI_01911 322159.STER_1291 4.5e-189 667.2 Bacilli desK GO:0003674,GO:0003824,GO:0004721,GO:0005488,GO:0005515,GO:0006464,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019538,GO:0036211,GO:0042578,GO:0042802,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:0140096,GO:1901564 2.7.13.3 ko:K07778 ko02020,map02020 M00479 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Bacteria 1TSUE@1239,4HB9N@91061,COG4585@1,COG4585@2 NA|NA|NA T Histidine kinase IIAPBPCI_01912 322159.STER_1292 1.1e-130 472.6 Firmicutes yvfS ko:K01992 M00254 ko00000,ko00002,ko02000 3.A.1 Bacteria 1V1AU@1239,COG0842@1,COG0842@2 NA|NA|NA V ABC-2 type transporter IIAPBPCI_01913 435842.HMPREF0848_00891 2.2e-157 561.6 Bacilli XK27_09825 ko:K01990 M00254 ko00000,ko00002,ko02000 3.A.1 Bacteria 1UZ04@1239,4HDGQ@91061,COG1131@1,COG1131@2 NA|NA|NA V abc transporter atp-binding protein IIAPBPCI_01916 264199.stu1330 2.5e-164 584.7 Bacilli yocS ko:K03453 ko00000 2.A.28 Bacteria 1TP85@1239,4HBG6@91061,COG0385@1,COG0385@2 NA|NA|NA S Transporter IIAPBPCI_01917 904306.HMPREF9192_1096 1.4e-83 315.5 Bacilli cdd GO:0003674,GO:0003824,GO:0004126,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006206,GO:0006213,GO:0006216,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0008655,GO:0009056,GO:0009058,GO:0009112,GO:0009116,GO:0009119,GO:0009163,GO:0009164,GO:0009972,GO:0009987,GO:0016020,GO:0016787,GO:0016810,GO:0016814,GO:0018130,GO:0019239,GO:0019438,GO:0019439,GO:0019856,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0034656,GO:0042454,GO:0042455,GO:0043094,GO:0043100,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046087,GO:0046108,GO:0046109,GO:0046112,GO:0046131,GO:0046132,GO:0046133,GO:0046134,GO:0046135,GO:0046483,GO:0046700,GO:0046872,GO:0046914,GO:0047844,GO:0055086,GO:0071704,GO:0071944,GO:0072527,GO:0072528,GO:0072529,GO:1901135,GO:1901136,GO:1901137,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901657,GO:1901658,GO:1901659 2.4.2.4,3.5.4.5 ko:K00758,ko:K01489 ko00240,ko00983,ko01100,ko05219,map00240,map00983,map01100,map05219 R01570,R01878,R02484,R02485,R08221,R08222,R08230 RC00063,RC00074,RC00514 ko00000,ko00001,ko01000 Bacteria 1V58S@1239,4HHTM@91061,COG0295@1,COG0295@2 NA|NA|NA F cytidine deaminase activity IIAPBPCI_01918 264199.stu1332 2.6e-35 154.1 Bacteria XK27_05000 ko:K06940 ko00000 Bacteria COG0727@1,COG0727@2 NA|NA|NA S metal cluster binding IIAPBPCI_01919 264199.stu1333 0.0 1118.2 Bacilli ko:K02004,ko:K19084 ko02010,ko02020,map02010,map02020 M00258,M00731,M00737 ko00000,ko00001,ko00002,ko02000 3.A.1,3.A.1.134 Bacteria 1TR2D@1239,4H9SH@91061,COG0577@1,COG0577@2 NA|NA|NA V ABC transporter (permease) IIAPBPCI_01920 435842.HMPREF0848_00909 2.4e-133 481.5 Bacilli macB2 ko:K02003 M00258 ko00000,ko00002,ko02000 3.A.1 Bacteria 1TNZG@1239,4H9UT@91061,COG1136@1,COG1136@2 NA|NA|NA V ABC transporter, ATP-binding protein IIAPBPCI_01921 264199.stu1335 3.1e-165 587.8 Bacilli Bacteria 1TQSG@1239,4HG2J@91061,COG0642@1,COG0642@2 NA|NA|NA T Histidine kinase IIAPBPCI_01922 1046629.Ssal_00835 4.6e-123 447.2 Bacilli Bacteria 1TR32@1239,4HAUJ@91061,COG0745@1,COG0745@2 NA|NA|NA KT Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain IIAPBPCI_01923 904306.HMPREF9192_1089 5.4e-78 297.0 Bacilli xpt GO:0003674,GO:0003824,GO:0006139,GO:0006166,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0043094,GO:0043101,GO:0043174,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046128,GO:0046129,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.2.22,2.4.2.7 ko:K00759,ko:K03816 ko00230,ko01100,ko01110,map00230,map01100,map01110 R00190,R01229,R02142,R04378 RC00063,RC00122 ko00000,ko00001,ko01000,ko04147 iYO844.BSU22070 Bacteria 1V1DU@1239,4HFNW@91061,COG0503@1,COG0503@2 NA|NA|NA F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis IIAPBPCI_01924 435842.HMPREF0848_00913 8.4e-141 506.5 Bacilli pbuX GO:0003674,GO:0005215,GO:0005345,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006863,GO:0008150,GO:0015205,GO:0015851,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0042906,GO:0042907,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0072530,GO:1904823 ko:K03458,ko:K16169,ko:K16170 ko00000,ko02000 2.A.40,2.A.40.3.1,2.A.40.3.2 iSB619.SA_RS02140 Bacteria 1TNZZ@1239,4HBAM@91061,COG2233@1,COG2233@2 NA|NA|NA F xanthine permease IIAPBPCI_01925 264199.stu1340 4.4e-59 233.8 Bacilli pbuX GO:0003674,GO:0005215,GO:0005345,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006863,GO:0008150,GO:0015205,GO:0015851,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0042906,GO:0042907,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0072530,GO:1904823 ko:K02824,ko:K03458,ko:K16169,ko:K16170 ko00000,ko02000 2.A.40,2.A.40.1.1,2.A.40.1.2,2.A.40.3.1,2.A.40.3.2 iSB619.SA_RS02140 Bacteria 1TNZZ@1239,4HBAM@91061,COG2233@1,COG2233@2 NA|NA|NA F xanthine permease IIAPBPCI_01926 322159.STER_1313 1.3e-246 858.6 Bacilli norM GO:0003674,GO:0005215,GO:0006810,GO:0006855,GO:0008150,GO:0015238,GO:0015893,GO:0022857,GO:0042221,GO:0042493,GO:0042891,GO:0042895,GO:0046677,GO:0050896,GO:0051179,GO:0051234,GO:0055085 ko:K03327 ko00000,ko02000 2.A.66.1 Bacteria 1TP5U@1239,4HA4W@91061,COG0534@1,COG0534@2 NA|NA|NA V Multidrug efflux pump IIAPBPCI_01927 264199.stu1343 9.7e-188 662.5 Bacilli msrA 1.8.4.11,1.8.4.12 ko:K07304,ko:K07305,ko:K12267 ko00000,ko01000 Bacteria 1TQ3E@1239,4HAIV@91061,COG0225@1,COG0225@2,COG0229@1,COG0229@2 NA|NA|NA O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine IIAPBPCI_01928 1123298.KB904062_gene857 2.6e-85 322.0 Bacilli yxeM ko:K16961 ko02010,map02010 M00586 ko00000,ko00001,ko00002,ko02000 3.A.1.3 Bacteria 1TR13@1239,4HDQ8@91061,COG0834@1,COG0834@2 NA|NA|NA ET Belongs to the bacterial solute-binding protein 3 family IIAPBPCI_01929 1123298.KB904062_gene858 1.1e-197 696.0 Bacilli pcaB 4.3.2.2 ko:K01756 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 M00048,M00049 R01083,R04559 RC00379,RC00444,RC00445 ko00000,ko00001,ko00002,ko01000 Bacteria 1TPMM@1239,4HDVU@91061,COG0015@1,COG0015@2 NA|NA|NA F Adenylosuccinate lyase IIAPBPCI_01930 1123298.KB904062_gene859 2.8e-92 345.1 Bacilli yxeO 3.6.3.21 ko:K02028,ko:K10008,ko:K16960,ko:K16963 ko02010,map02010 M00233,M00236,M00585,M00586 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.3,3.A.1.3.13,3.A.1.3.9 Bacteria 1TNYD@1239,4H9WY@91061,COG1126@1,COG1126@2 NA|NA|NA E abc transporter atp-binding protein IIAPBPCI_01931 1423806.JCM15457_2516 9.8e-65 253.4 Lactobacillaceae yxeN GO:0003333,GO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006820,GO:0006865,GO:0008150,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015318,GO:0015711,GO:0015849,GO:0016020,GO:0022857,GO:0034220,GO:0044464,GO:0046942,GO:0046943,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098656,GO:1903825,GO:1905039 ko:K16961,ko:K16962 ko02010,map02010 M00586 ko00000,ko00001,ko00002,ko02000 3.A.1.3 Bacteria 1UZ2C@1239,3F7IY@33958,4HF77@91061,COG0765@1,COG0765@2 NA|NA|NA U ABC transporter, permease protein IIAPBPCI_01932 1123298.KB904062_gene861 5.4e-58 230.7 Bacilli yxeL ko:K00680 ko00000,ko01000 Bacteria 1VC6Z@1239,4ISI0@91061,COG0454@1,COG0456@2 NA|NA|NA K Acetyltransferase (GNAT) domain IIAPBPCI_01933 1123298.KB904062_gene862 2.3e-115 422.5 Bacilli yxeQ GO:0003674,GO:0003824,GO:0006082,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009987,GO:0016829,GO:0016835,GO:0016836,GO:0016999,GO:0017144,GO:0019541,GO:0019679,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0046459,GO:0047547,GO:0071704 Bacteria 1TSD7@1239,4IS19@91061,COG2079@1,COG2079@2 NA|NA|NA S MmgE/PrpD family IIAPBPCI_01934 1123298.KB904062_gene863 6e-147 527.3 Bacilli ykrV3 2.6.1.83 ko:K08969,ko:K10206 ko00270,ko00300,ko01100,ko01110,ko01130,ko01230,map00270,map00300,map01100,map01110,map01130,map01230 M00034,M00527 R07396,R07613 RC00006,RC01847 ko00000,ko00001,ko00002,ko01000,ko01007 Bacteria 1TQD6@1239,4HAHQ@91061,COG0436@1,COG0436@2 NA|NA|NA E mutations do not affect methionine salvage in vivo however IIAPBPCI_01935 1123298.KB904062_gene864 1.9e-102 379.0 Bacilli gldA GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0008150,GO:0008152,GO:0016491,GO:0016614,GO:0016616,GO:0042802,GO:0047545,GO:0055114 1.1.1.1,1.1.1.6 ko:K00001,ko:K00005,ko:K08317 ko00010,ko00071,ko00350,ko00561,ko00625,ko00626,ko00640,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00561,map00625,map00626,map00640,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220 R00623,R00754,R01034,R02124,R04805,R04880,R05233,R05234,R06917,R06927,R07105,R08281,R08306,R08310,R10715,R10717 RC00029,RC00050,RC00087,RC00088,RC00099,RC00116,RC00117,RC00649,RC00670,RC01734,RC02273 ko00000,ko00001,ko01000 iJN678.gldA Bacteria 1TQFU@1239,4HC8K@91061,COG0371@1,COG0371@2 NA|NA|NA C glycerol dehydrogenase IIAPBPCI_01936 1154860.SAG0136_00780 3.2e-07 60.5 Bacilli gldA GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0008150,GO:0008152,GO:0016491,GO:0016614,GO:0016616,GO:0042802,GO:0047545,GO:0055114 1.1.1.1,1.1.1.6 ko:K00001,ko:K00005,ko:K08317 ko00010,ko00071,ko00350,ko00561,ko00625,ko00626,ko00640,ko00830,ko00980,ko00982,ko01100,ko01110,ko01120,ko01130,ko01220,map00010,map00071,map00350,map00561,map00625,map00626,map00640,map00830,map00980,map00982,map01100,map01110,map01120,map01130,map01220 R00623,R00754,R01034,R02124,R04805,R04880,R05233,R05234,R06917,R06927,R07105,R08281,R08306,R08310,R10715,R10717 RC00029,RC00050,RC00087,RC00088,RC00099,RC00116,RC00117,RC00649,RC00670,RC01734,RC02273 ko00000,ko00001,ko01000 iJN678.gldA Bacteria 1TQFU@1239,4HC8K@91061,COG0371@1,COG0371@2 NA|NA|NA C glycerol dehydrogenase IIAPBPCI_01937 1123298.KB904062_gene865 2.3e-183 648.3 Bacilli hipO ko:K01436,ko:K21613 ko00000,ko01000,ko01002 Bacteria 1TPD7@1239,4H9WQ@91061,COG1473@1,COG1473@2 NA|NA|NA E COG1473 Metal-dependent amidase aminoacylase carboxypeptidase IIAPBPCI_01938 322159.STER_1315 1.5e-234 818.5 Bacilli brnQ GO:0003333,GO:0003674,GO:0005215,GO:0005304,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0006855,GO:0006865,GO:0008150,GO:0008324,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015175,GO:0015179,GO:0015188,GO:0015190,GO:0015238,GO:0015318,GO:0015658,GO:0015711,GO:0015803,GO:0015804,GO:0015807,GO:0015818,GO:0015820,GO:0015829,GO:0015849,GO:0015893,GO:0016020,GO:0022857,GO:0034220,GO:0042221,GO:0042493,GO:0044464,GO:0046942,GO:0046943,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098655,GO:0098656,GO:1902475,GO:1903785,GO:1903825,GO:1905039 ko:K03311 ko00000 2.A.26 Bacteria 1TQIS@1239,4HAKA@91061,COG1114@1,COG1114@2 NA|NA|NA E Component of the transport system for branched-chain amino acids IIAPBPCI_01939 264199.stu1358 9.4e-65 252.7 Bacilli manA 5.3.1.8 ko:K01809 ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130 M00114 R01819 RC00376 ko00000,ko00001,ko00002,ko01000 Bacteria 1VRGI@1239,4HBFW@91061,COG1482@1,COG1482@2 NA|NA|NA G mannose-6-phosphate isomerase IIAPBPCI_01940 264199.stu1359 8.2e-57 226.1 Bacilli manA 5.3.1.8 ko:K01809 ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130 M00114 R01819 RC00376 ko00000,ko00001,ko00002,ko01000 Bacteria 1VRGI@1239,4HBFW@91061,COG1482@1,COG1482@2 NA|NA|NA G mannose-6-phosphate isomerase IIAPBPCI_01941 264199.stu1360 4.8e-25 119.8 Bacteria csbD Bacteria COG3237@1,COG3237@2 NA|NA|NA K CsbD-like IIAPBPCI_01942 264199.stu1361 1.1e-227 795.8 Bacilli yfnA ko:K03294 ko00000 2.A.3.2 Bacteria 1TQ4K@1239,4HA66@91061,COG0531@1,COG0531@2 NA|NA|NA E amino acid IIAPBPCI_01943 1046629.Ssal_00817 4e-69 267.7 Bacteria Bacteria COG5263@1,COG5263@2 NA|NA|NA S dextransucrase activity IIAPBPCI_01944 435842.HMPREF0848_00928 6.3e-14 82.8 Bacteria Bacteria COG5263@1,COG5263@2 NA|NA|NA S dextransucrase activity IIAPBPCI_01945 435842.HMPREF0848_00928 8.8e-39 166.0 Bacteria Bacteria COG5263@1,COG5263@2 NA|NA|NA S dextransucrase activity IIAPBPCI_01946 435842.HMPREF0848_00928 1.1e-139 502.7 Bacteria Bacteria COG5263@1,COG5263@2 NA|NA|NA S dextransucrase activity IIAPBPCI_01947 1161413.HMPREF1510_1836 1.6e-21 107.8 Firmicutes ko:K07497 ko00000 Bacteria 1TQQY@1239,COG2801@1,COG2801@2 NA|NA|NA L Integrase core domain protein IIAPBPCI_01950 435842.HMPREF0848_00929 6.9e-136 490.0 Bacilli tcyC2 3.6.3.21 ko:K02028,ko:K10010,ko:K16960 ko02010,map02010 M00234,M00236,M00585 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.3,3.A.1.3.10,3.A.1.3.13,3.A.1.3.14 Bacteria 1TNYD@1239,4H9WY@91061,COG1126@1,COG1126@2 NA|NA|NA E abc transporter atp-binding protein IIAPBPCI_01951 435842.HMPREF0848_00930 6.7e-114 416.8 Bacilli yxeN ko:K16959,ko:K16962 ko02010,map02010 M00585,M00586 ko00000,ko00001,ko00002,ko02000 3.A.1.3,3.A.1.3.13 Bacteria 1V1PT@1239,4HI18@91061,COG0765@1,COG0765@2 NA|NA|NA P ABC transporter, permease protein IIAPBPCI_01952 435842.HMPREF0848_00931 6.1e-107 393.7 Bacilli ytmL ko:K02029,ko:K10009,ko:K16958,ko:K16959 ko02010,map02010 M00234,M00236,M00585 ko00000,ko00001,ko00002,ko02000 3.A.1.3,3.A.1.3.10,3.A.1.3.13,3.A.1.3.14 Bacteria 1V4Q3@1239,4HDVS@91061,COG0765@1,COG0765@2 NA|NA|NA P ABC transporter (Permease IIAPBPCI_01953 435842.HMPREF0848_00932 2.4e-161 574.7 Bacilli ko:K16957 ko02010,map02010 M00585 ko00000,ko00001,ko00002,ko02000 3.A.1.3.13 Bacteria 1UX4B@1239,4HG72@91061,COG0834@1,COG0834@2 NA|NA|NA ET ABC transporter substrate-binding protein IIAPBPCI_01954 435842.HMPREF0848_00933 8.1e-161 573.2 Bacilli 4.1.1.37 ko:K01599,ko:K16957 ko00860,ko01100,ko01110,ko02010,map00860,map01100,map01110,map02010 M00121,M00585 R03197,R04972 RC00872 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.3.13 Bacteria 1TNYE@1239,4HQ5B@91061,COG0407@1,COG0407@2 NA|NA|NA H Uroporphyrinogen decarboxylase (URO-D) IIAPBPCI_01955 435842.HMPREF0848_00934 1.1e-83 315.8 Bacilli btuE 1.11.1.9 ko:K00432 ko00480,ko00590,ko04918,map00480,map00590,map04918 R00274,R07034,R07035 RC00011,RC00982 ko00000,ko00001,ko01000 Bacteria 1V3M3@1239,4HH5Q@91061,COG0386@1,COG0386@2 NA|NA|NA O Belongs to the glutathione peroxidase family IIAPBPCI_01956 1046629.Ssal_00807 2.4e-40 171.0 Bacilli ko:K15383 ko00000,ko02000 9.A.58.2 Bacteria 1VBI9@1239,4HN2M@91061,COG4095@1,COG4095@2 NA|NA|NA S Sugar efflux transporter for intercellular exchange IIAPBPCI_01957 1095727.HMPREF1117_1383 5.9e-23 113.2 Bacilli ko:K02004 M00258 ko00000,ko00002,ko02000 3.A.1 Bacteria 1TSN2@1239,28K0P@1,2Z9QJ@2,4HU6K@91061 NA|NA|NA P FtsX-like permease family IIAPBPCI_01958 1316408.HSISM1_1672 3.2e-91 341.3 Bacilli ko:K02003 M00258 ko00000,ko00002,ko02000 3.A.1 Bacteria 1U3WD@1239,4HV7M@91061,COG1136@1,COG1136@2 NA|NA|NA V abc transporter atp-binding protein IIAPBPCI_01959 889204.HMPREF9423_0305 3.9e-82 310.8 Bacilli Bacteria 1V2BY@1239,4HPW3@91061,COG1309@1,COG1309@2 NA|NA|NA K WHG domain IIAPBPCI_01960 1046629.Ssal_00802 9.4e-68 262.7 Bacilli ydhF Bacteria 1TQ12@1239,4HA57@91061,COG4989@1,COG4989@2 NA|NA|NA S Aldo keto reductase IIAPBPCI_01961 435842.HMPREF0848_00939 2.1e-71 275.0 Bacilli ydhF Bacteria 1TQ12@1239,4HA57@91061,COG4989@1,COG4989@2 NA|NA|NA S Aldo keto reductase IIAPBPCI_01963 264199.stu1363 5.7e-109 400.2 Bacilli XK27_02070 ko:K07078 ko00000 Bacteria 1V1CR@1239,4HD6W@91061,COG3560@1,COG3560@2 NA|NA|NA S nitroreductase IIAPBPCI_01964 322159.STER_1320 5.3e-150 537.0 Bacilli 1.13.11.2 ko:K07104 ko00361,ko00362,ko00622,ko00643,ko01100,ko01120,ko01220,map00361,map00362,map00622,map00643,map01100,map01120,map01220 M00569 R00816,R04089,R05295,R05404,R05406,R07795 RC00387,RC00643,RC01075,RC01364,RC01914 ko00000,ko00001,ko00002,ko01000 Bacteria 1TPRF@1239,4HAE7@91061,COG2514@1,COG2514@2 NA|NA|NA S glyoxalase IIAPBPCI_01965 1046629.Ssal_00039 3.8e-102 377.5 Firmicutes Bacteria 1TQ93@1239,COG3464@1,COG3464@2 NA|NA|NA L Transposase IIAPBPCI_01966 264199.stu1086 2.3e-119 434.9 Firmicutes Bacteria 1TQ93@1239,COG3464@1,COG3464@2 NA|NA|NA L Transposase IIAPBPCI_01967 264199.stu1366 4.7e-76 290.4 Bacilli ywnA Bacteria 1V6FK@1239,4HKZD@91061,COG1959@1,COG1959@2 NA|NA|NA K Transcriptional regulator IIAPBPCI_01968 322159.STER_1322 1.6e-157 562.0 Bacilli Bacteria 1V13S@1239,4HENM@91061,COG4814@1,COG4814@2 NA|NA|NA E Alpha/beta hydrolase of unknown function (DUF915) IIAPBPCI_01969 322159.STER_1323 1.9e-231 808.1 Bacilli pts13C ko:K02761 ko00500,ko02060,map00500,map02060 M00275 R11170,R11172 RC00017,RC03206 ko00000,ko00001,ko00002,ko02000 4.A.3.2 Bacteria 1V5SI@1239,4HJTK@91061,COG1455@1,COG1455@2 NA|NA|NA G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane IIAPBPCI_01970 264199.stu1369 2.2e-111 408.3 Bacilli drgA Bacteria 1UYJU@1239,4HBVQ@91061,COG0778@1,COG0778@2 NA|NA|NA C Nitroreductase IIAPBPCI_01971 322159.STER_1325 8.2e-68 263.1 Firmicutes yoaK Bacteria 1V9ME@1239,COG3619@1,COG3619@2 NA|NA|NA S Protein of unknown function (DUF1275) IIAPBPCI_01972 904306.HMPREF9192_1065 8.1e-27 125.9 Firmicutes yoaK Bacteria 1V9ME@1239,COG3619@1,COG3619@2 NA|NA|NA S Protein of unknown function (DUF1275) IIAPBPCI_01973 322159.STER_1326 8.4e-159 566.2 Bacilli yvgN Bacteria 1TPM1@1239,4HARE@91061,COG0656@1,COG0656@2 NA|NA|NA C reductase IIAPBPCI_01974 904306.HMPREF9192_1063 2.6e-180 637.9 Bacilli galE 5.1.3.2 ko:K01784 ko00052,ko00520,ko01100,map00052,map00520,map01100 M00361,M00362,M00632 R00291,R02984 RC00289 ko00000,ko00001,ko00002,ko01000 Bacteria 1TQ7N@1239,4H9U5@91061,COG1087@1,COG1087@2 NA|NA|NA M Belongs to the NAD(P)-dependent epimerase dehydratase family IIAPBPCI_01975 322159.STER_1332 3e-284 983.8 Bacilli XK27_07020 Bacteria 1TQYE@1239,4HDNX@91061,COG4868@1,COG4868@2 NA|NA|NA S Belongs to the UPF0371 family IIAPBPCI_01977 1203590.HMPREF1481_01686 4.8e-55 220.3 Bacilli Bacteria 1V4S4@1239,4HH0U@91061,COG0745@1,COG0745@2 NA|NA|NA K response regulator IIAPBPCI_01978 904306.HMPREF9192_1034 2.7e-71 274.6 Bacilli Bacteria 1V0E0@1239,2EXVW@1,33R50@2,4HBMI@91061 NA|NA|NA S Signal peptide protein, YSIRK family IIAPBPCI_01980 264199.stu1384 3.2e-59 234.2 Bacilli Bacteria 1VFMU@1239,2E59Z@1,33028@2,4HQG9@91061 NA|NA|NA IIAPBPCI_01981 322159.STER_1339 4.2e-264 916.8 Bacilli uvrX 2.7.7.7 ko:K02346,ko:K03502,ko:K14161 ko00000,ko01000,ko03400 Bacteria 1TP42@1239,4HA1P@91061,COG0389@1,COG0389@2 NA|NA|NA L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII IIAPBPCI_01982 264199.stu1386 8.5e-117 427.2 Bacilli Bacteria 1VBXK@1239,2CWIF@1,32SZQ@2,4HWJ5@91061 NA|NA|NA IIAPBPCI_01983 862970.SAIN_0151 9.4e-11 72.8 Streptococcus anginosus group Bacteria 1TVY9@1239,29H5Y@1,3043H@2,42EEJ@671232,4I4K4@91061 NA|NA|NA IIAPBPCI_01985 345219.Bcoa_1815 0.0 1384.4 Bacillus 3.1.21.3 ko:K01153 ko00000,ko01000,ko02048 Bacteria 1TP7S@1239,1ZCG9@1386,4HB5A@91061,COG0610@1,COG0610@2 NA|NA|NA L Subunit R is required for both nuclease and ATPase activities, but not for modification IIAPBPCI_01986 1316408.HSISM1_1027 1.1e-74 287.3 Bacteria hsdS 3.1.21.3 ko:K01154 ko00000,ko01000,ko02048 Bacteria COG0732@1,COG0732@2 NA|NA|NA V type I restriction modification DNA specificity domain IIAPBPCI_01987 1027396.LMOSA_12070 0.0 1075.5 Listeriaceae hsdM 2.1.1.72 ko:K03427 ko00000,ko01000,ko02048 Bacteria 1TPGZ@1239,26IQ9@186820,4HA1J@91061,COG0286@1,COG0286@2 NA|NA|NA V Type I restriction-modification system IIAPBPCI_01988 264199.stu1392 0.0 1404.4 Bacilli Bacteria 1VATJ@1239,4HG1M@91061,COG1216@1,COG1216@2,COG1442@1,COG1442@2 NA|NA|NA M family 8 IIAPBPCI_01989 1069533.Sinf_0805 1.5e-37 161.8 Bacteria ko:K07483 ko00000 Bacteria COG2963@1,COG2963@2 NA|NA|NA L transposase activity IIAPBPCI_01990 1123299.AUKZ01000032_gene1329 1.5e-39 168.3 Bacteria Bacteria COG2801@1,COG2801@2 NA|NA|NA L transposition IIAPBPCI_01991 1403946.Q615_SPAC00123G0003 1.5e-21 107.8 Bacilli Bacteria 1TPEH@1239,4HCHG@91061,COG2801@1,COG2801@2 NA|NA|NA L Transposase and inactivated derivatives IIAPBPCI_01992 1403946.Q615_SPAC00123G0004 9e-44 182.6 Bacilli ko:K07483 ko00000 Bacteria 1V9ZX@1239,4HKN9@91061,COG2963@1,COG2963@2 NA|NA|NA L COG2963 Transposase and inactivated derivatives IIAPBPCI_01993 264199.stu1386 8.5e-09 66.2 Bacilli Bacteria 1VBXK@1239,2CWIF@1,32SZQ@2,4HWJ5@91061 NA|NA|NA IIAPBPCI_01994 1321372.AQQB01000076_gene537 3.3e-30 137.1 Streptococcus suis Bacteria 1U996@1239,1WU2Q@1307,2B3ZK@1,31WPQ@2,4IJBS@91061 NA|NA|NA S Antidote-toxin recognition MazE, bacterial antitoxin IIAPBPCI_01995 1123299.AUKZ01000011_gene1075 1e-69 269.2 Bacilli doc ko:K07341 ko00000,ko02048 Bacteria 1VCC8@1239,4HKXW@91061,COG3654@1,COG3654@2 NA|NA|NA S Prophage maintenance system killer protein IIAPBPCI_01996 322159.STER_0151 1.3e-232 812.0 Firmicutes ko:K07485 ko00000 Bacteria 1TQ93@1239,COG3464@1,COG3464@2 NA|NA|NA L Transposase IIAPBPCI_01997 862970.SAIN_0151 2.2e-17 95.9 Streptococcus anginosus group Bacteria 1TVY9@1239,29H5Y@1,3043H@2,42EEJ@671232,4I4K4@91061 NA|NA|NA IIAPBPCI_01998 1123299.AUKZ01000032_gene1329 1.5e-39 168.3 Bacteria Bacteria COG2801@1,COG2801@2 NA|NA|NA L transposition IIAPBPCI_01999 1403946.Q615_SPAC00123G0003 5.9e-62 243.4 Bacilli Bacteria 1TPEH@1239,4HCHG@91061,COG2801@1,COG2801@2 NA|NA|NA L Transposase and inactivated derivatives IIAPBPCI_02000 1403946.Q615_SPAC00123G0004 3.1e-44 184.1 Bacilli ko:K07483 ko00000 Bacteria 1V9ZX@1239,4HKN9@91061,COG2963@1,COG2963@2 NA|NA|NA L COG2963 Transposase and inactivated derivatives IIAPBPCI_02001 706433.HMPREF9430_01341 1e-31 143.3 Firmicutes Bacteria 1V146@1239,28ITE@1,2Z8SB@2 NA|NA|NA IIAPBPCI_02002 264199.stu1394 0.0 1419.1 Bacilli sbcC ko:K03546 ko00000,ko03400 Bacteria 1TPCS@1239,4H9Q3@91061,COG0419@1,COG0419@2 NA|NA|NA L ATPase involved in DNA repair IIAPBPCI_02003 264199.stu1395 7.6e-230 802.7 Bacilli sbcD ko:K03547 ko00000,ko03400 Bacteria 1TQY6@1239,4HAKB@91061,COG0420@1,COG0420@2 NA|NA|NA L SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity IIAPBPCI_02004 264199.stu1397 0.0 2111.3 Bacilli lacL 3.2.1.23 ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 R01105,R01678,R03355,R04783,R06114 RC00049,RC00452 ko00000,ko00001,ko01000 Bacteria 1TPDC@1239,4HANW@91061,COG3250@1,COG3250@2 NA|NA|NA G -beta-galactosidase IIAPBPCI_02005 322159.STER_1367 0.0 1183.3 Bacilli lacS GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K03292,ko:K11104,ko:K16209 ko00000,ko02000 2.A.2,2.A.2.1,2.A.2.2 Bacteria 1TRA5@1239,4HCDS@91061,COG2190@1,COG2190@2,COG2211@1,COG2211@2 NA|NA|NA G transporter IIAPBPCI_02006 264199.stu1399 8.7e-198 696.0 Bacilli galM 5.1.3.3 ko:K01785 ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130 M00632 R01602,R10619 RC00563 ko00000,ko00001,ko00002,ko01000 Bacteria 1V5UK@1239,4HTRY@91061,COG2017@1,COG2017@2 NA|NA|NA G Catalyzes the interconversion of alpha and beta anomers of maltose IIAPBPCI_02007 322159.STER_1369 4.3e-194 683.7 Bacilli galE 5.1.3.2 ko:K01784 ko00052,ko00520,ko01100,map00052,map00520,map01100 M00361,M00362,M00632 R00291,R02984 RC00289 ko00000,ko00001,ko00002,ko01000 Bacteria 1TQ7N@1239,4H9U5@91061,COG1087@1,COG1087@2 NA|NA|NA M Belongs to the NAD(P)-dependent epimerase dehydratase family IIAPBPCI_02008 264199.stu1401 2.8e-290 1003.8 Bacilli galT 2.7.7.12 ko:K00965 ko00052,ko00520,ko01100,ko04917,map00052,map00520,map01100,map04917 M00362,M00554,M00632 R00955 RC00002 ko00000,ko00001,ko00002,ko01000 Bacteria 1TPBN@1239,4HAYJ@91061,COG4468@1,COG4468@2 NA|NA|NA G UDPglucose--hexose-1-phosphate uridylyltransferase IIAPBPCI_02009 322159.STER_1371 2e-219 768.1 Bacilli galK GO:0005975,GO:0005996,GO:0006012,GO:0008150,GO:0008152,GO:0019318,GO:0044238,GO:0044281,GO:0071704 2.7.1.6 ko:K00849 ko00052,ko00520,ko01100,map00052,map00520,map01100 M00554,M00632 R01092 RC00002,RC00078 ko00000,ko00001,ko00002,ko01000,ko04147 Bacteria 1TPD0@1239,4HARP@91061,COG0153@1,COG0153@2 NA|NA|NA G Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P) IIAPBPCI_02010 904306.HMPREF9192_1002 1.7e-21 108.2 Bacilli galR ko:K02529 ko00000,ko03000 Bacteria 1TPZJ@1239,4HC9Z@91061,COG1609@1,COG1609@2 NA|NA|NA K Transcriptional regulator IIAPBPCI_02011 264199.stu1403 2.3e-150 538.1 Bacilli galR ko:K02529 ko00000,ko03000 Bacteria 1TPZJ@1239,4HC9Z@91061,COG1609@1,COG1609@2 NA|NA|NA K Transcriptional regulator IIAPBPCI_02012 264199.stu0038 1.2e-08 64.3 Firmicutes ko:K07497 ko00000 Bacteria 1TQQY@1239,COG2801@1,COG2801@2 NA|NA|NA L Integrase core domain protein IIAPBPCI_02013 264199.stu1405 6.7e-24 115.9 Bacteria ko:K07497 ko00000 Bacteria COG2801@1,COG2801@2 NA|NA|NA L transposition IIAPBPCI_02014 904306.HMPREF9192_1001 3.6e-258 897.1 Bacilli zmpB GO:0005575,GO:0005618,GO:0005623,GO:0009986,GO:0016020,GO:0030312,GO:0044464,GO:0071944 ko:K08643 ko00000,ko01000,ko01002 Bacteria 1UJ29@1239,4IT10@91061,COG3064@1,COG3064@2 NA|NA|NA M M26 IgA1-specific Metallo-endopeptidase C-terminal region IIAPBPCI_02015 904306.HMPREF9192_0999 3.6e-100 370.9 Bacilli ko:K06147 ko00000,ko02000 3.A.1.106,3.A.1.109,3.A.1.21 Bacteria 1TP0B@1239,4HA3S@91061,COG1132@1,COG1132@2 NA|NA|NA V abc transporter atp-binding protein IIAPBPCI_02016 264199.stu1412 2.1e-39 167.9 Bacteria ko:K18996,ko:K19171 ko00000,ko02048,ko03032 Bacteria COG1132@1,COG1132@2 NA|NA|NA V (ABC) transporter IIAPBPCI_02017 264199.stu1413 0.0 1508.0 Bacilli gshF 6.3.2.2,6.3.2.29,6.3.2.30,6.3.2.4 ko:K01919,ko:K01921,ko:K03802,ko:K16786,ko:K16787 ko00270,ko00473,ko00480,ko00550,ko01100,ko01502,ko02010,map00270,map00473,map00480,map00550,map01100,map01502,map02010 M00118,M00582 R00894,R01150,R10993 RC00064,RC00090,RC00141 ko00000,ko00001,ko00002,ko01000,ko01011,ko02000 3.A.1.25,3.A.1.28,3.A.1.29,3.A.1.30,3.A.1.31,3.A.1.32,3.A.1.33,3.A.1.35 Bacteria 1TPGX@1239,4HAMJ@91061,COG1181@1,COG1181@2,COG2918@1,COG2918@2 NA|NA|NA H Belongs to the glutamate--cysteine ligase type 1 family IIAPBPCI_02019 1046629.Ssal_00660 1.4e-273 948.3 Bacilli Bacteria 1VBKU@1239,2DI63@1,32UAI@2,4HUJH@91061 NA|NA|NA S Protein of unknown function (DUF3114) IIAPBPCI_02020 1046629.Ssal_00659 1.7e-51 208.4 Bacilli 2.3.1.128 ko:K03789 ko00000,ko01000,ko03009 Bacteria 1VEW7@1239,4HPE4@91061,COG0454@1,COG0456@2 NA|NA|NA K Acetyltransferase GNAT Family IIAPBPCI_02021 467705.SGO_1358 1.1e-196 693.0 Bacteria ko:K06147,ko:K06148 ko00000,ko02000 3.A.1,3.A.1.106,3.A.1.109,3.A.1.21 Bacteria COG1132@1,COG1132@2 NA|NA|NA V (ABC) transporter IIAPBPCI_02022 264199.stu1512 1.2e-157 562.8 Bacilli ko:K06871 ko00000 Bacteria 1TQPS@1239,4HCKJ@91061,COG0641@1,COG0641@2 NA|NA|NA C Arylsulfatase regulator (Fe-S oxidoreductase) IIAPBPCI_02023 322159.STER_0367 5.9e-219 766.5 Bacilli Bacteria 1TP4C@1239,4HAXJ@91061,COG3328@1,COG3328@2 NA|NA|NA L Transposase IIAPBPCI_02024 264199.stu1512 2e-11 74.7 Bacilli ko:K06871 ko00000 Bacteria 1TQPS@1239,4HCKJ@91061,COG0641@1,COG0641@2 NA|NA|NA C Arylsulfatase regulator (Fe-S oxidoreductase) IIAPBPCI_02025 467705.SGO_1359 1.6e-112 412.5 Bacteria ko:K20373 ko02024,map02024 ko00000,ko00001,ko03000 Bacteria COG1396@1,COG1396@2 NA|NA|NA K sequence-specific DNA binding IIAPBPCI_02026 1116231.SMA_1913 4.6e-18 97.1 Bacilli ko:K07497 ko00000 Bacteria 1TU21@1239,4HDK4@91061,COG2801@1,COG2801@2 NA|NA|NA L COG2801 Transposase and inactivated derivatives IIAPBPCI_02027 1117379.BABA_02482 3e-25 120.6 Bacillus ko:K07497 ko00000 Bacteria 1TU21@1239,1ZB1J@1386,4HDK4@91061,COG2801@1,COG2801@2 NA|NA|NA L COG2801 Transposase and inactivated derivatives IIAPBPCI_02028 1069533.Sinf_0806 3.3e-68 264.2 Bacteria ko:K07497 ko00000 Bacteria COG2801@1,COG2801@2 NA|NA|NA L transposition IIAPBPCI_02029 1069533.Sinf_0805 1.5e-37 161.8 Bacteria ko:K07483 ko00000 Bacteria COG2963@1,COG2963@2 NA|NA|NA L transposase activity IIAPBPCI_02030 1046629.Ssal_00654 5.9e-25 119.4 Bacilli glgB GO:0000271,GO:0003674,GO:0003824,GO:0003844,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005975,GO:0005976,GO:0005977,GO:0005978,GO:0006073,GO:0006091,GO:0006112,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009250,GO:0009987,GO:0015980,GO:0016020,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0033554,GO:0033692,GO:0034637,GO:0034645,GO:0040007,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716,GO:0055114,GO:0071704,GO:0071944,GO:1901576 2.4.1.18,3.2.1.141,3.2.1.20 ko:K00700,ko:K01187,ko:K01236,ko:K17734 ko00052,ko00500,ko01100,ko01110,map00052,map00500,map01100,map01110 M00565 R00028,R00801,R00802,R02110,R06087,R06088,R09995,R11256 RC00028,RC00049,RC00077 ko00000,ko00001,ko00002,ko01000,ko01002,ko04147 CBM48,GH13,GH31 iAPECO1_1312.APECO1_3025,iECNA114_1301.ECNA114_3542,iECOK1_1307.ECOK1_3857,iECS88_1305.ECS88_3830,iECSF_1327.ECSF_3253,iJN678.glgB,iLF82_1304.LF82_0837,iNRG857_1313.NRG857_17030,iUTI89_1310.UTI89_C3941 Bacteria 1TP4M@1239,4HAPM@91061,COG0296@1,COG0296@2 NA|NA|NA G Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position IIAPBPCI_02031 1046629.Ssal_00653 2.1e-82 312.0 Bacilli pulA 3.2.1.41 ko:K01200 ko00500,ko01100,ko01110,map00500,map01100,map01110 R02111 ko00000,ko00001,ko01000 CBM48,GH13 Bacteria 1TP3M@1239,4HBP5@91061,COG1523@1,COG1523@2 NA|NA|NA G belongs to the glycosyl hydrolase 13 family IIAPBPCI_02032 904306.HMPREF9192_0969 6.6e-84 316.6 Bacilli pulA 3.2.1.41 ko:K01200 ko00500,ko01100,ko01110,map00500,map01100,map01110 R02111 ko00000,ko00001,ko01000 CBM48,GH13 Bacteria 1TP3M@1239,4HBP5@91061,COG1523@1,COG1523@2 NA|NA|NA G belongs to the glycosyl hydrolase 13 family IIAPBPCI_02033 1046629.Ssal_00653 3.6e-117 427.9 Bacilli pulA 3.2.1.41 ko:K01200 ko00500,ko01100,ko01110,map00500,map01100,map01110 R02111 ko00000,ko00001,ko01000 CBM48,GH13 Bacteria 1TP3M@1239,4HBP5@91061,COG1523@1,COG1523@2 NA|NA|NA G belongs to the glycosyl hydrolase 13 family IIAPBPCI_02034 264199.stu1416 0.0 1441.0 Bacilli ftsK GO:0000003,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0019954,GO:0030436,GO:0031323,GO:0031326,GO:0032502,GO:0043934,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:1903506,GO:2000112,GO:2001141 ko:K03466 ko00000,ko03036 3.A.12 Bacteria 1TPJR@1239,4H9WA@91061,COG1674@1,COG1674@2 NA|NA|NA D Belongs to the FtsK SpoIIIE SftA family IIAPBPCI_02035 264199.stu1417 5e-187 660.2 Bacilli trxB1 1.18.1.2,1.19.1.1 ko:K21567 ko00000,ko01000 Bacteria 1TRPN@1239,4H9V7@91061,COG0492@1,COG0492@2 NA|NA|NA C Ferredoxin--NADP reductase IIAPBPCI_02036 264199.stu1418 1.4e-135 488.8 Bacilli trmD GO:0000287,GO:0001510,GO:0002939,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0040007,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0050518,GO:0052906,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228,4.6.1.12 ko:K00554,ko:K01770 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 M00096 R00597,R05637 RC00002,RC00003,RC00334,RC01440 ko00000,ko00001,ko00002,ko01000,ko03016 Bacteria 1TPBV@1239,4HBFV@91061,COG0336@1,COG0336@2 NA|NA|NA J Belongs to the RNA methyltransferase TrmD family IIAPBPCI_02037 322159.STER_1384 1.3e-93 349.0 Bacilli rimM GO:0000028,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016072,GO:0022607,GO:0022613,GO:0022618,GO:0030490,GO:0034470,GO:0034622,GO:0034641,GO:0034660,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:1901360 ko:K02860 ko00000,ko03009 Bacteria 1V6HD@1239,4HH3H@91061,COG0806@1,COG0806@2 NA|NA|NA J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes IIAPBPCI_02040 322159.STER_1387 2.2e-114 418.3 Bacilli vraR ko:K07694,ko:K11618 ko02020,map02020 M00480,M00481,M00754 ko00000,ko00001,ko00002,ko02022 Bacteria 1TQ1U@1239,4HA4B@91061,COG2197@1,COG2197@2 NA|NA|NA K Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain IIAPBPCI_02041 264199.stu1421 3.8e-174 617.5 Bacilli vraS 2.7.13.3 ko:K07673,ko:K07681,ko:K11617 ko02020,map02020 M00471,M00480,M00481,M00754 ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 Bacteria 1TPDG@1239,4HC7E@91061,COG4585@1,COG4585@2 NA|NA|NA T Histidine kinase IIAPBPCI_02042 264199.stu1422 9.1e-119 433.0 Bacteria yvqF ko:K11622 ko02020,map02020 ko00000,ko00001 Bacteria COG4758@1,COG4758@2 NA|NA|NA KT membrane IIAPBPCI_02043 264199.stu1425 5.3e-307 1059.7 Bacilli prkC GO:0002237,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005488,GO:0005539,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009605,GO:0009607,GO:0009617,GO:0009719,GO:0009847,GO:0009987,GO:0010033,GO:0010243,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019538,GO:0023052,GO:0032494,GO:0032502,GO:0036211,GO:0042221,GO:0042834,GO:0043170,GO:0043207,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051704,GO:0051707,GO:0051716,GO:0065007,GO:0070887,GO:0071216,GO:0071219,GO:0071224,GO:0071310,GO:0071417,GO:0071495,GO:0071704,GO:0071944,GO:0097367,GO:0140096,GO:1901564,GO:1901698,GO:1901699,GO:1901700,GO:1901701 2.7.11.1 ko:K12132 ko00000,ko01000,ko01001 Bacteria 1TP3F@1239,4H9KD@91061,COG0515@1,COG0515@2,COG2815@1,COG2815@2 NA|NA|NA KLT serine threonine protein kinase IIAPBPCI_02044 264199.stu1426 2.9e-131 474.6 Bacilli stp 3.1.3.16 ko:K20074 ko00000,ko01000,ko01009 Bacteria 1V6K5@1239,4HCDR@91061,COG0631@1,COG0631@2 NA|NA|NA T phosphatase IIAPBPCI_02045 264199.stu1427 2.2e-246 857.8 Bacilli sun GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008173,GO:0008649,GO:0008757,GO:0009383,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0030312,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.176 ko:K03500 ko00000,ko01000,ko03009 Bacteria 1TP3N@1239,4HBQ6@91061,COG0144@1,COG0144@2,COG0781@1,COG0781@2 NA|NA|NA J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA IIAPBPCI_02046 264199.stu1428 1e-173 615.9 Bacilli fmt GO:0003674,GO:0003824,GO:0004479,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006464,GO:0006518,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043043,GO:0043170,GO:0043412,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.1.2.9 ko:K00604 ko00670,ko00970,map00670,map00970 R03940 RC00026,RC00165 ko00000,ko00001,ko01000 iSB619.SA_RS06010 Bacteria 1TQ32@1239,4HART@91061,COG0223@1,COG0223@2 NA|NA|NA J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus IIAPBPCI_02047 264199.stu1429 0.0 1580.8 Bacilli priA GO:0003674,GO:0003678,GO:0003824,GO:0004003,GO:0004386,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006268,GO:0006270,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032392,GO:0032508,GO:0033554,GO:0034641,GO:0034645,GO:0042623,GO:0043138,GO:0043140,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0046483,GO:0050896,GO:0051276,GO:0051716,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360,GO:1901576 ko:K04066 ko03440,map03440 ko00000,ko00001,ko01000,ko03400 Bacteria 1TNYB@1239,4H9WW@91061,COG1198@1,COG1198@2 NA|NA|NA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA IIAPBPCI_02048 264199.stu1430 2.7e-46 191.0 Bacteria rpoZ GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0030312,GO:0030880,GO:0032774,GO:0032991,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0040007,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0061695,GO:0071704,GO:0071944,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234 2.7.7.6 ko:K03060 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 M00183 R00435,R00441,R00442,R00443 RC02795 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 Bacteria COG1758@1,COG1758@2 NA|NA|NA K DNA-directed 5'-3' RNA polymerase activity IIAPBPCI_02049 264199.stu1431 2e-112 411.8 Bacilli gmk GO:0003674,GO:0003824,GO:0004385,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009150,GO:0009161,GO:0009165,GO:0009167,GO:0009179,GO:0009185,GO:0009259,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042278,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046483,GO:0046710,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.4.8 ko:K00942 ko00230,ko01100,map00230,map01100 M00050 R00332,R02090 RC00002 ko00000,ko00001,ko00002,ko01000 iYO844.BSU15680 Bacteria 1TP0M@1239,4HAYW@91061,COG0194@1,COG0194@2 NA|NA|NA F Essential for recycling GMP and indirectly, cGMP IIAPBPCI_02050 264199.stu1432 6.7e-214 750.0 Bacilli ftsY ko:K03110 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 ko00000,ko00001,ko00002,ko02044 3.A.5.1,3.A.5.2,3.A.5.7 Bacteria 1TPRI@1239,4HA6A@91061,COG0552@1,COG0552@2 NA|NA|NA U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) IIAPBPCI_02051 322159.STER_1400 5.3e-150 537.0 Bacilli XK27_02985 Bacteria 1TR2E@1239,4HGA9@91061,COG0561@1,COG0561@2 NA|NA|NA S overlaps another CDS with the same product name IIAPBPCI_02052 322159.STER_1401 2.1e-148 531.6 Bacilli supH Bacteria 1V2JE@1239,4IPK2@91061,COG0561@1,COG0561@2 NA|NA|NA S overlaps another CDS with the same product name IIAPBPCI_02053 322159.STER_1402 8.6e-63 246.1 Bacilli yvoA_1 ko:K07979 ko00000,ko03000 Bacteria 1VFD0@1239,4HNIT@91061,COG1725@1,COG1725@2 NA|NA|NA K Transcriptional IIAPBPCI_02054 264199.stu1436 9.8e-121 439.5 Bacilli skfE ko:K01990 M00254 ko00000,ko00002,ko02000 3.A.1 Bacteria 1TPUP@1239,4HGHM@91061,COG1131@1,COG1131@2 NA|NA|NA V abc transporter atp-binding protein IIAPBPCI_02055 322159.STER_1404 5.6e-133 480.3 Bacteria ko:K01990 M00254 ko00000,ko00002,ko02000 3.A.1 Bacteria COG1131@1,COG1131@2 NA|NA|NA V ATPase activity IIAPBPCI_02056 264199.stu1438 1.2e-171 609.0 Bacilli oppF GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K02032,ko:K10823 ko01501,ko02010,ko02024,map01501,map02010,map02024 M00239,M00439 ko00000,ko00001,ko00002,ko02000 3.A.1.5,3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25 Bacteria 1V36J@1239,4HCM4@91061,COG4608@1,COG4608@2 NA|NA|NA P Belongs to the ABC transporter superfamily IIAPBPCI_02057 264199.stu1439 1.4e-203 715.3 Bacilli oppD GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K02031,ko:K02032,ko:K15583 ko01501,ko02010,ko02024,map01501,map02010,map02024 M00239,M00439 ko00000,ko00001,ko00002,ko02000 3.A.1.5,3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25 Bacteria 1TP6E@1239,4H9MR@91061,COG0444@1,COG0444@2 NA|NA|NA P Belongs to the ABC transporter superfamily IIAPBPCI_02058 264199.stu1440 3.1e-167 594.3 Bacilli amiD ko:K15582 ko01501,ko02010,ko02024,map01501,map02010,map02024 M00439 ko00000,ko00001,ko00002,ko02000 3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25 Bacteria 1TP4R@1239,4HE8S@91061,COG1173@1,COG1173@2 NA|NA|NA P ABC transporter (Permease IIAPBPCI_02059 904306.HMPREF9192_0942 1.1e-270 938.7 Bacilli amiC GO:0003674,GO:0005215,GO:0006810,GO:0008150,GO:0022857,GO:0051179,GO:0051234,GO:0055085 ko:K02033,ko:K13894,ko:K15581 ko01501,ko02010,ko02024,map01501,map02010,map02024 M00239,M00349,M00439 ko00000,ko00001,ko00002,ko02000 3.A.1.5,3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.21,3.A.1.5.24,3.A.1.5.25 Bacteria 1UY5U@1239,4HEZK@91061,COG0601@1,COG0601@2 NA|NA|NA P ABC transporter (Permease IIAPBPCI_02060 322159.STER_1411 0.0 1279.6 Bacilli amiA GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K15580 ko01501,ko02010,ko02024,map01501,map02010,map02024 M00439 ko00000,ko00001,ko00002,ko02000 3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25 Bacteria 1TQVS@1239,4HCCB@91061,COG4166@1,COG4166@2 NA|NA|NA E ABC transporter, substrate-binding protein, family 5 IIAPBPCI_02061 1046629.Ssal_00627 1.2e-24 118.2 Bacilli oppF GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K02032,ko:K10823 ko01501,ko02010,ko02024,map01501,map02010,map02024 M00239,M00439 ko00000,ko00001,ko00002,ko02000 3.A.1.5,3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25 Bacteria 1V36J@1239,4HCM4@91061,COG4608@1,COG4608@2 NA|NA|NA P Belongs to the ABC transporter superfamily IIAPBPCI_02062 264199.stu1447 1.1e-44 185.7 Bacilli oppF GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K02032,ko:K10823 ko01501,ko02010,ko02024,map01501,map02010,map02024 M00239,M00439 ko00000,ko00001,ko00002,ko02000 3.A.1.5,3.A.1.5.1,3.A.1.5.18,3.A.1.5.19,3.A.1.5.25 Bacteria 1V36J@1239,4HCM4@91061,COG4608@1,COG4608@2 NA|NA|NA P Belongs to the ABC transporter superfamily IIAPBPCI_02063 525379.HMPREF0819_1242 1.4e-40 171.8 Bacilli tatD GO:0003674,GO:0003824,GO:0004518,GO:0004536,GO:0006139,GO:0006259,GO:0006308,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016787,GO:0016788,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901361,GO:1901575 ko:K03424 ko00000,ko01000 Bacteria 1TNY1@1239,4HA74@91061,COG0084@1,COG0084@2 NA|NA|NA L Hydrolase, tatd IIAPBPCI_02064 322159.STER_1416 9.9e-214 749.2 Bacilli oxlT ko:K08177 ko00000,ko02000 2.A.1.11 Bacteria 1TPR9@1239,4HB93@91061,COG2223@1,COG2223@2 NA|NA|NA P COG0477 Permeases of the major facilitator superfamily IIAPBPCI_02065 264199.stu1451 3.6e-95 354.4 Firmicutes ko:K07497 ko00000 Bacteria 1TRR6@1239,COG2801@1,COG2801@2 NA|NA|NA L PFAM Integrase catalytic region IIAPBPCI_02066 322159.STER_0016 4.9e-18 97.1 Firmicutes ko:K07483 ko00000 Bacteria 1W68S@1239,COG2963@1,COG2963@2 NA|NA|NA L Transposase IIAPBPCI_02067 1316408.HSISM1_560 6.1e-37 159.8 Bacilli ko:K07483 ko00000 Bacteria 1VDX9@1239,4HRT2@91061,COG2963@1,COG2963@2 NA|NA|NA L Transposase IIAPBPCI_02068 264199.stu1455 5.9e-180 636.7 Bacilli pta 2.3.1.8,3.6.3.21 ko:K00625,ko:K02028,ko:K13788 ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200 M00236,M00357,M00579 R00230,R00921 RC00004,RC02746,RC02816 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.3 iSB619.SA_RS03155 Bacteria 1TPQ0@1239,4H9VH@91061,COG0280@1,COG0280@2 NA|NA|NA C phosphate acetyltransferase IIAPBPCI_02069 264199.stu1456 1.1e-172 612.5 Bacilli rluD GO:0000027,GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022607,GO:0022613,GO:0022618,GO:0031118,GO:0034470,GO:0034622,GO:0034641,GO:0034660,GO:0042254,GO:0042255,GO:0042273,GO:0043170,GO:0043412,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:1901360 5.4.99.23,5.4.99.28,5.4.99.29 ko:K06177,ko:K06180 ko00000,ko01000,ko03009,ko03016 iE2348C_1286.E2348C_2868,iECED1_1282.ECED1_3035,iECSF_1327.ECSF_2432 Bacteria 1TS1T@1239,4HBRY@91061,COG0564@1,COG0564@2 NA|NA|NA J Responsible for synthesis of pseudouridine from uracil IIAPBPCI_02070 264199.stu1457 3.7e-151 540.8 Bacilli nadK GO:0000166,GO:0003674,GO:0003824,GO:0003951,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006741,GO:0006753,GO:0006766,GO:0006767,GO:0006769,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008976,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009820,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016776,GO:0017076,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046496,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0051287,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:0097367,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.7.1.23 ko:K00858 ko00760,ko01100,map00760,map01100 R00104 RC00002,RC00078 ko00000,ko00001,ko01000 iEcSMS35_1347.EcSMS35_2767,iHN637.CLJU_RS05480,iLJ478.TM1733,iSB619.SA_RS04895 Bacteria 1TRB3@1239,4HB08@91061,COG0061@1,COG0061@2 NA|NA|NA H Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP IIAPBPCI_02071 264199.stu1459 1.4e-119 435.6 Bacilli yjbM 2.7.6.5 ko:K07816 ko00230,map00230 R00429 RC00002,RC00078 ko00000,ko00001,ko01000 Bacteria 1TQ2F@1239,4HA3Q@91061,COG2357@1,COG2357@2 NA|NA|NA S Gtp pyrophosphokinase IIAPBPCI_02072 264199.stu1458 1.5e-103 382.1 Bacilli yjbK Bacteria 1VA56@1239,4HMNE@91061,COG4116@1,COG4116@2 NA|NA|NA S Adenylate cyclase IIAPBPCI_02073 322159.STER_1425 1.2e-177 629.0 Bacilli prs 2.7.6.1 ko:K00948 ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230 M00005 R01049 RC00002,RC00078 ko00000,ko00001,ko00002,ko01000 iAF987.Gmet_2848 Bacteria 1TQ4I@1239,4HDRN@91061,COG0462@1,COG0462@2 NA|NA|NA F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) IIAPBPCI_02074 264199.stu1461 3.2e-206 724.2 Bacilli iscS 2.8.1.7 ko:K04487 ko00730,ko01100,ko04122,map00730,map01100,map04122 R07460,R11528,R11529 RC01789,RC02313 ko00000,ko00001,ko01000,ko02048,ko03016,ko03029 Bacteria 1TP21@1239,4HA6H@91061,COG1104@1,COG1104@2 NA|NA|NA E Cysteine desulfurase IIAPBPCI_02075 264199.stu1462 2e-58 231.5 Bacilli XK27_04120 Bacteria 1VDSF@1239,2DHWG@1,32U9W@2,4HP9N@91061 NA|NA|NA S Putative amino acid metabolism IIAPBPCI_02076 322159.STER_1428 4.7e-117 427.2 Bacilli rex ko:K01926 ko00000,ko03000 Bacteria 1TSMR@1239,4HB7Q@91061,COG2344@1,COG2344@2 NA|NA|NA K Modulates transcription in response to changes in cellular NADH NAD( ) redox state IIAPBPCI_02077 904306.HMPREF9192_0931 2.7e-123 448.0 Bacilli puuD ko:K07010 ko00000,ko01002 Bacteria 1V1KC@1239,4HI59@91061,COG2071@1,COG2071@2 NA|NA|NA T peptidase C26 IIAPBPCI_02078 322159.STER_1430 1.2e-115 422.5 Bacilli radC ko:K03630 ko00000 Bacteria 1TQ3K@1239,4HB1W@91061,COG2003@1,COG2003@2 NA|NA|NA E Belongs to the UPF0758 family IIAPBPCI_02079 322159.STER_1431 1.7e-268 931.4 Bacteria Bacteria COG4713@1,COG4713@2 NA|NA|NA M Psort location CytoplasmicMembrane, score IIAPBPCI_02080 322159.STER_1432 0.0 1198.3 Bacilli rgpF ko:K07272 ko00000,ko01000,ko01003,ko01005 Bacteria 1V95X@1239,4HIXP@91061,COG3754@1,COG3754@2 NA|NA|NA M Rhamnan synthesis protein F IIAPBPCI_02081 322159.STER_1433 4.5e-305 1053.1 Bacteria ko:K00754 ko00000,ko01000 GT4 Bacteria COG0438@1,COG0438@2 NA|NA|NA M transferase activity, transferring glycosyl groups IIAPBPCI_02082 322159.STER_1434 6.4e-229 799.7 Bacilli rgpD 3.6.3.38 ko:K01990,ko:K09689,ko:K09691 ko02010,map02010 M00249,M00250,M00254 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1,3.A.1.101,3.A.1.103 Bacteria 1TQKK@1239,4HC6N@91061,COG1134@1,COG1134@2 NA|NA|NA P Part of the ABC transporter complex TagGH involved in teichoic acids export. Responsible for energy coupling to the transport system IIAPBPCI_02083 322159.STER_1435 1.8e-142 511.9 Bacilli rgpC ko:K01992 M00254 ko00000,ko00002,ko02000 3.A.1 Bacteria 1V1J2@1239,4HI7C@91061,COG1682@1,COG1682@2 NA|NA|NA GM Transport permease protein IIAPBPCI_02084 322159.STER_1436 6.4e-176 623.2 Bacilli rgpB ko:K12997 ko00000,ko01000,ko01003,ko01005 GT2 Bacteria 1V7IQ@1239,4HK7R@91061,COG0463@1,COG0463@2 NA|NA|NA M Glycosyltransferase, group 2 family protein IIAPBPCI_02085 322159.STER_1437 2.3e-228 797.7 Bacilli rgpA ko:K12996 ko00000,ko01000,ko01003,ko01005 GT4 Bacteria 1V7K7@1239,4HA9A@91061,COG0438@1,COG0438@2 NA|NA|NA M Domain of unknown function (DUF1972) IIAPBPCI_02086 322159.STER_1438 2.4e-152 544.7 Firmicutes 2.4.1.60 ko:K07011,ko:K13005 ko00000,ko01000,ko01003,ko01005 Bacteria 1UI19@1239,COG1216@1,COG1216@2 NA|NA|NA S Glycosyltransferase group 2 family protein IIAPBPCI_02087 1046629.Ssal_00599 4.6e-42 177.2 Firmicutes ko:K09153 ko00000 Bacteria 1VPQZ@1239,2EVMS@1,33P1S@2 NA|NA|NA S Uncharacterized conserved protein (DUF2304) IIAPBPCI_02088 322159.STER_1440 6.9e-130 469.9 Bacilli arnC ko:K00786 ko00000,ko01000 Bacteria 1UHQZ@1239,4IS6R@91061,COG1215@1,COG1215@2 NA|NA|NA M group 2 family protein IIAPBPCI_02089 322159.STER_1441 9.5e-183 646.0 Bacilli cpsIaJ Bacteria 1V3XP@1239,4HQNP@91061,COG1216@1,COG1216@2 NA|NA|NA S Glycosyltransferase like family 2 IIAPBPCI_02090 322159.STER_1442 6e-185 653.3 Firmicutes Bacteria 1UJE4@1239,COG1216@1,COG1216@2 NA|NA|NA S Glycosyltransferase like family 2 IIAPBPCI_02091 904306.HMPREF9192_0915 8.2e-219 766.1 Bacilli amrA Bacteria 1V1RP@1239,4IR8D@91061,COG2244@1,COG2244@2 NA|NA|NA S membrane protein involved in the export of O-antigen and teichoic acid IIAPBPCI_02092 264199.stu1483 4e-161 573.9 Bacilli rfbD 1.1.1.133,5.1.3.13 ko:K00067,ko:K01790 ko00521,ko00523,ko01130,map00521,map00523,map01130 M00793 R02777,R06514 RC00182,RC01531 ko00000,ko00001,ko00002,ko01000 Bacteria 1TP71@1239,4HBXF@91061,COG1091@1,COG1091@2 NA|NA|NA M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose IIAPBPCI_02093 264199.stu1484 1.9e-245 854.7 Firmicutes Bacteria 1VPDR@1239,2DSN8@1,33GRU@2 NA|NA|NA IIAPBPCI_02094 322159.STER_1446 9.8e-169 599.4 Bacilli yfdH ko:K12999,ko:K20534 ko00000,ko01000,ko01003,ko01005,ko02000 4.D.2.1.9 GT2 Bacteria 1TPR3@1239,4HC2Z@91061,COG0463@1,COG0463@2 NA|NA|NA M COG0463, glycosyltransferases involved in cell wall biogenesis IIAPBPCI_02095 264199.stu1487 3.4e-55 220.7 Bacilli yitW ko:K02612 ko00360,ko01120,map00360,map01120 R09838 RC02690 ko00000,ko00001 Bacteria 1V9YV@1239,4HKC6@91061,COG2151@1,COG2151@2 NA|NA|NA K metal-sulfur cluster biosynthetic enzyme IIAPBPCI_02096 322159.STER_1448 1.1e-201 709.1 Bacilli sigA GO:0000988,GO:0000990,GO:0001098,GO:0001101,GO:0001108,GO:0001666,GO:0002791,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006355,GO:0006950,GO:0008150,GO:0009266,GO:0009405,GO:0009408,GO:0009410,GO:0009415,GO:0009628,GO:0009889,GO:0009891,GO:0009893,GO:0010035,GO:0010468,GO:0010556,GO:0010557,GO:0010565,GO:0010604,GO:0010628,GO:0016020,GO:0016987,GO:0019216,GO:0019217,GO:0019219,GO:0019222,GO:0019899,GO:0030312,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032879,GO:0032880,GO:0036293,GO:0040007,GO:0042221,GO:0043175,GO:0043254,GO:0044087,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050708,GO:0050789,GO:0050794,GO:0050896,GO:0051046,GO:0051049,GO:0051128,GO:0051171,GO:0051173,GO:0051223,GO:0051252,GO:0051254,GO:0051704,GO:0060255,GO:0062012,GO:0065007,GO:0070063,GO:0070201,GO:0070482,GO:0071944,GO:0080090,GO:0090087,GO:0097159,GO:0140110,GO:1901363,GO:1901700,GO:1902680,GO:1903506,GO:1903508,GO:1903530,GO:2000112,GO:2000142,GO:2001141 ko:K03086,ko:K03087 ko02026,ko05111,map02026,map05111 ko00000,ko00001,ko03021 Bacteria 1TPD6@1239,4HB1H@91061,COG0568@1,COG0568@2 NA|NA|NA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth IIAPBPCI_02097 264199.stu1489 0.0 1156.0 Bacilli dnaG ko:K02316 ko03030,map03030 ko00000,ko00001,ko01000,ko03032 Bacteria 1TQ0X@1239,4HAG2@91061,COG0358@1,COG0358@2 NA|NA|NA L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication IIAPBPCI_02098 873449.STRCR_1157 1.5e-46 192.2 Bacilli mscL GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006884,GO:0008150,GO:0008361,GO:0008381,GO:0009987,GO:0009992,GO:0015267,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0022803,GO:0022836,GO:0022857,GO:0030104,GO:0031224,GO:0032535,GO:0042592,GO:0044425,GO:0048878,GO:0051179,GO:0051234,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071840,GO:0090066 ko:K03282 ko00000,ko02000 1.A.22.1 Bacteria 1VA14@1239,4HKIA@91061,COG1970@1,COG1970@2 NA|NA|NA M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell IIAPBPCI_02099 1046629.Ssal_00586 1.2e-19 101.7 Bacilli rpsU GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02970 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011 Bacteria 1VEHU@1239,4HNPV@91061,COG0828@1,COG0828@2 NA|NA|NA J Belongs to the bacterial ribosomal protein bS21 family IIAPBPCI_02100 322159.STER_1452 4.2e-136 490.7 Bacilli gltS ko:K02030,ko:K17073,ko:K17074 ko02010,map02010 M00236,M00589 ko00000,ko00001,ko00002,ko02000 3.A.1.3,3.A.1.3.20 Bacteria 1TT16@1239,4HD16@91061,COG0834@1,COG0834@2 NA|NA|NA ET Belongs to the bacterial solute-binding protein 3 family IIAPBPCI_02101 264199.stu1493 1.7e-199 701.8 Bacilli arcT 2.6.1.1 ko:K00812 ko00220,ko00250,ko00270,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230 R00355,R00694,R00734,R00896,R02433,R02619,R05052 RC00006 ko00000,ko00001,ko01000,ko01007 Bacteria 1TQPD@1239,4HE7P@91061,COG0436@1,COG0436@2 NA|NA|NA E Aminotransferase IIAPBPCI_02102 322159.STER_1454 8.8e-134 483.0 Bacilli ko:K02030,ko:K17073,ko:K17074 ko02010,map02010 M00236,M00589 ko00000,ko00001,ko00002,ko02000 3.A.1.3,3.A.1.3.20 Bacteria 1TT16@1239,4HJ2R@91061,COG0834@1,COG0834@2 NA|NA|NA ET ABC transporter IIAPBPCI_02103 264199.stu1495 1.7e-140 505.4 Firmicutes ko:K02030,ko:K17073,ko:K17074 ko02010,map02010 M00236,M00589 ko00000,ko00001,ko00002,ko02000 3.A.1.3,3.A.1.3.20 Bacteria 1TT16@1239,COG0834@1,COG0834@2 NA|NA|NA ET Belongs to the bacterial solute-binding protein 3 family IIAPBPCI_02104 322159.STER_1456 2.9e-84 317.8 Firmicutes mutT 3.6.1.55 ko:K03574 ko00000,ko01000,ko03400 Bacteria 1V3MM@1239,COG1051@1,COG1051@2 NA|NA|NA F Nudix family IIAPBPCI_02105 322159.STER_1457 0.0 1288.5 Bacilli uvrB ko:K03702,ko:K08999 ko03420,map03420 ko00000,ko00001,ko03400 Bacteria 1TPKB@1239,4HB81@91061,COG0556@1,COG0556@2 NA|NA|NA L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage IIAPBPCI_02107 904306.HMPREF9192_0897 4.3e-82 310.8 Bacilli ko:K07052 ko00000 Bacteria 1VA8S@1239,4IQWI@91061,COG1266@1,COG1266@2 NA|NA|NA S CAAX amino terminal protease family protein IIAPBPCI_02108 904306.HMPREF9192_0897 2.4e-33 147.9 Bacilli ko:K07052 ko00000 Bacteria 1VA8S@1239,4IQWI@91061,COG1266@1,COG1266@2 NA|NA|NA S CAAX amino terminal protease family protein IIAPBPCI_02109 322159.STER_1461 0.0 1363.2 Bacilli glnP ko:K02029,ko:K02030,ko:K10040,ko:K17073,ko:K17074 ko02010,map02010 M00228,M00236,M00589 ko00000,ko00001,ko00002,ko02000 3.A.1.3,3.A.1.3.20 Bacteria 1TQUG@1239,4HAJ5@91061,COG0765@1,COG0765@2,COG0834@1,COG0834@2 NA|NA|NA P ABC-type amino acid transport signal transduction systems periplasmic component domain IIAPBPCI_02110 322159.STER_1462 6e-137 493.4 Bacilli glnQ 3.6.3.21 ko:K02028,ko:K10038 ko02010,map02010 M00227,M00236 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.3,3.A.1.3.2 Bacteria 1TNYD@1239,4H9WY@91061,COG1126@1,COG1126@2 NA|NA|NA E abc transporter atp-binding protein IIAPBPCI_02111 1214217.ALNF01000018_gene931 1.1e-16 92.0 Streptococcus suis XK27_00735 Bacteria 1U94Q@1239,1WTRS@1307,29R2M@1,30C3R@2,4IJ5T@91061 NA|NA|NA IIAPBPCI_02112 264199.stu1504 1.4e-248 865.1 Bacilli obg GO:0000003,GO:0000160,GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0007154,GO:0007165,GO:0008150,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019954,GO:0023052,GO:0030436,GO:0032502,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035556,GO:0035639,GO:0036094,GO:0043021,GO:0043022,GO:0043167,GO:0043168,GO:0043934,GO:0044424,GO:0044464,GO:0044877,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0097159,GO:0097367,GO:1901265,GO:1901363 ko:K03979 ko00000,ko01000,ko03009 Bacteria 1TPX7@1239,4H9P8@91061,COG0536@1,COG0536@2 NA|NA|NA S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control IIAPBPCI_02113 322159.STER_1466 6.4e-131 473.4 Bacilli rsuA GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 5.4.99.19,5.4.99.22 ko:K06178,ko:K06183 ko00000,ko01000,ko03009 Bacteria 1TQZ2@1239,4H9VU@91061,COG1187@1,COG1187@2 NA|NA|NA J Belongs to the pseudouridine synthase RsuA family IIAPBPCI_02116 264199.stu1516 1.6e-64 251.9 Bacilli paaI ko:K02614 ko00360,map00360 R09840 RC00004,RC00014 ko00000,ko00001,ko01000 Bacteria 1VN0K@1239,4HM66@91061,COG2050@1,COG2050@2 NA|NA|NA Q protein possibly involved in aromatic compounds catabolism IIAPBPCI_02117 322159.STER_1470 3.9e-50 203.8 Bacteria ycaO ko:K06889,ko:K07397,ko:K09136 ko00000,ko03009 Bacteria COG1765@1,COG1765@2 NA|NA|NA O OsmC-like protein IIAPBPCI_02119 264199.stu1517 3.8e-154 550.8 Firmicutes Bacteria 1TYSF@1239,COG0697@1,COG0697@2 NA|NA|NA EG Permeases of the drug metabolite transporter (DMT) superfamily IIAPBPCI_02121 322159.STER_1474 5.6e-110 403.7 Bacilli csn2 ko:K19137 ko00000,ko02048 Bacteria 1V1IF@1239,298VG@1,2ZVZK@2,4HGGM@91061 NA|NA|NA S CRISPR-associated protein (Cas_Csn2) IIAPBPCI_02122 322159.STER_1475 3.5e-52 210.7 Bacilli cas2 ko:K09951 ko00000,ko02048 Bacteria 1VEH4@1239,4HNYR@91061,COG3512@1,COG3512@2 NA|NA|NA L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette IIAPBPCI_02123 322159.STER_1476 1.5e-163 582.0 Bacilli cas1 ko:K15342 ko00000,ko02048,ko03400 Bacteria 1TT0J@1239,4HC5E@91061,COG1518@1,COG1518@2 NA|NA|NA L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette IIAPBPCI_02124 322159.STER_1477 0.0 2706.8 Bacilli cas9 ko:K09952 ko00000,ko01000,ko02048 Bacteria 1TPSD@1239,4HE0R@91061,COG3513@1,COG3513@2 NA|NA|NA L CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer IIAPBPCI_02125 264199.stu1519 4.4e-115 420.6 Bacilli serB 3.1.3.3 ko:K01079 ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230 M00020 R00582 RC00017 ko00000,ko00001,ko00002,ko01000,ko01009 Bacteria 1V9R7@1239,4HTNE@91061,COG0560@1,COG0560@2 NA|NA|NA E phosphoserine phosphatase IIAPBPCI_02126 264199.stu1520 6.2e-302 1042.7 Bacilli ezrA GO:0000278,GO:0000281,GO:0000910,GO:0000917,GO:0000918,GO:0000921,GO:0005575,GO:0005623,GO:0005886,GO:0006996,GO:0007010,GO:0007049,GO:0008150,GO:0009987,GO:0016020,GO:0016043,GO:0022402,GO:0022607,GO:0031106,GO:0032185,GO:0032506,GO:0034622,GO:0043933,GO:0044085,GO:0044464,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051301,GO:0051302,GO:0051781,GO:0061640,GO:0065003,GO:0065007,GO:0070925,GO:0071840,GO:0071944,GO:0090529,GO:1902410,GO:1903047 ko:K06286,ko:K07158 ko00000,ko03036 Bacteria 1TQR7@1239,4HA15@91061,COG4477@1,COG4477@2 NA|NA|NA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization IIAPBPCI_02127 264199.stu1521 0.0 1272.3 Bacilli gyrB GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0003916,GO:0003918,GO:0005488,GO:0005524,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006265,GO:0006725,GO:0006807,GO:0006996,GO:0007059,GO:0008094,GO:0008144,GO:0008150,GO:0008152,GO:0009295,GO:0009987,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016887,GO:0017076,GO:0017111,GO:0030312,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034335,GO:0034641,GO:0035639,GO:0036094,GO:0040007,GO:0042623,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044464,GO:0046483,GO:0046872,GO:0051276,GO:0061505,GO:0071103,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0097159,GO:0097367,GO:0140097,GO:1901265,GO:1901360,GO:1901363 5.99.1.3 ko:K02470,ko:K02622 ko00000,ko01000,ko02048,ko03032,ko03036,ko03400 Bacteria 1TQ0R@1239,4H9Y6@91061,COG0187@1,COG0187@2 NA|NA|NA L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner IIAPBPCI_02128 264199.stu1522 1.6e-97 362.1 Bacilli 3.1.3.18 ko:K01091,ko:K07025 ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130 R01334 RC00017 ko00000,ko00001,ko01000 Bacteria 1V421@1239,4HHYH@91061,COG0546@1,COG0546@2 NA|NA|NA S IA, variant 1 IIAPBPCI_02129 322159.STER_1482 2.2e-117 428.3 Bacilli lrgB Bacteria 1TRGN@1239,4HF0M@91061,COG1346@1,COG1346@2 NA|NA|NA M effector of murein hydrolase IIAPBPCI_02130 322159.STER_1483 7.7e-56 223.0 Firmicutes lrgA GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 ko:K06518 ko00000,ko02000 1.E.14.2 Bacteria 1VEN4@1239,COG1380@1,COG1380@2 NA|NA|NA S Effector of murein hydrolase LrgA IIAPBPCI_02132 264199.stu1525 3.2e-59 234.2 Bacilli arsC 1.20.4.1 ko:K00537,ko:K16509 ko00000,ko01000 Bacteria 1VA5Q@1239,4HKQQ@91061,COG1393@1,COG1393@2 NA|NA|NA P Belongs to the ArsC family IIAPBPCI_02133 904306.HMPREF9192_0874 5.3e-56 223.4 Bacteria ogt GO:0003674,GO:0003824,GO:0003908,GO:0006139,GO:0006259,GO:0006281,GO:0006304,GO:0006307,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008168,GO:0008172,GO:0009987,GO:0016740,GO:0016741,GO:0032259,GO:0033554,GO:0034641,GO:0035510,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360 2.1.1.63,3.2.2.20 ko:K00567,ko:K01246 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Bacteria COG0350@1,COG0350@2 NA|NA|NA L methylated-DNA-[protein]-cysteine S-methyltransferase activity IIAPBPCI_02134 322159.STER_1487 1.5e-219 768.5 Bacilli serA 1.1.1.399,1.1.1.95 ko:K00058 ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230 M00020 R01513 RC00031 ko00000,ko00001,ko00002,ko01000,ko04147 Bacteria 1V410@1239,4H9PH@91061,COG0111@1,COG0111@2 NA|NA|NA EH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family IIAPBPCI_02135 264199.stu1528 1.3e-104 385.6 Bacilli wecD Bacteria 1UIW7@1239,4ISU9@91061,COG1247@1,COG1247@2 NA|NA|NA M Acetyltransferase (GNAT) domain IIAPBPCI_02136 322159.STER_1489 1.9e-208 731.5 Bacilli serC GO:0003674,GO:0003824,GO:0004648,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006563,GO:0006564,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.6.1.52 ko:K00831 ko00260,ko00680,ko00750,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map00750,map01100,map01120,map01130,map01200,map01230 M00020,M00124 R04173,R05085 RC00006,RC00036 ko00000,ko00001,ko00002,ko01000,ko01007 Bacteria 1TP6Y@1239,4HATT@91061,COG1932@1,COG1932@2 NA|NA|NA E Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine IIAPBPCI_02137 264199.stu1530 4e-50 203.8 Bacilli Bacteria 1TRQ7@1239,4HE30@91061,COG1940@1,COG1940@2 NA|NA|NA GK ROK family IIAPBPCI_02138 264199.stu1530 4.1e-54 217.2 Bacilli Bacteria 1TRQ7@1239,4HE30@91061,COG1940@1,COG1940@2 NA|NA|NA GK ROK family IIAPBPCI_02139 264199.stu1532 8.1e-72 276.2 Bacilli gloA 4.4.1.5 ko:K01759,ko:K15772 ko00620,ko02010,map00620,map02010 M00491 R02530 RC00004,RC00740 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.1.16,3.A.1.1.2 Bacteria 1V6K3@1239,4HJ7X@91061,COG0346@1,COG0346@2 NA|NA|NA E Lactoylglutathione lyase IIAPBPCI_02140 264199.stu1533 1.7e-47 195.3 Bacteria XK27_08050 Bacteria COG0330@1,COG0330@2 NA|NA|NA O stress-induced mitochondrial fusion IIAPBPCI_02141 1046629.Ssal_00531 1.7e-36 158.3 Bacilli XK27_08050 Bacteria 1TPXU@1239,4HGRC@91061,COG0330@1,COG0330@2 NA|NA|NA O HflC and HflK could regulate a protease IIAPBPCI_02142 904306.HMPREF9192_0867 1.3e-19 102.1 Bacilli XK27_08050 Bacteria 1TPXU@1239,4HGRC@91061,COG0330@1,COG0330@2 NA|NA|NA O HflC and HflK could regulate a protease IIAPBPCI_02143 264199.stu1535 2.3e-206 724.5 Bacilli potD ko:K11069 ko02010,map02010 M00299 ko00000,ko00001,ko00002,ko02000 3.A.1.11.1 iSB619.SA_RS05395 Bacteria 1TPY1@1239,4HAET@91061,COG0687@1,COG0687@2 NA|NA|NA P spermidine putrescine ABC transporter IIAPBPCI_02144 322159.STER_1494 3e-134 484.6 Bacilli potC GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008324,GO:0008519,GO:0015075,GO:0015101,GO:0015203,GO:0015399,GO:0015405,GO:0015417,GO:0015595,GO:0015606,GO:0015695,GO:0015696,GO:0015846,GO:0015847,GO:0015848,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0031224,GO:0031226,GO:0032991,GO:0034220,GO:0042623,GO:0042626,GO:0043190,GO:0043492,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0072488,GO:0098533,GO:0098655,GO:0098796,GO:0098797,GO:1902047,GO:1902494,GO:1902495,GO:1903711,GO:1904949,GO:1990351 ko:K11070 ko02010,map02010 M00299 ko00000,ko00001,ko00002,ko02000 3.A.1.11.1 iSBO_1134.SBO_1939 Bacteria 1V0VD@1239,4H9ZC@91061,COG1177@1,COG1177@2 NA|NA|NA P ABC-type spermidine putrescine transport system, permease component II IIAPBPCI_02145 264199.stu1537 3.7e-140 504.2 Bacilli potB ko:K11071 ko02010,map02010 M00299 ko00000,ko00001,ko00002,ko02000 3.A.1.11.1 Bacteria 1TQ7Z@1239,4HAYS@91061,COG1176@1,COG1176@2 NA|NA|NA P ABC-type spermidine putrescine transport system, permease component I IIAPBPCI_02146 322159.STER_1496 2.8e-213 747.7 Bacilli potA 3.6.3.30,3.6.3.31 ko:K02010,ko:K11072 ko02010,map02010 M00190,M00299 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.10,3.A.1.11.1 iSB619.SA_RS05380 Bacteria 1TP2M@1239,4H9MS@91061,COG3842@1,COG3842@2 NA|NA|NA P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system IIAPBPCI_02147 322159.STER_1497 7.8e-171 606.3 Bacilli murB 1.3.1.98 ko:K00075 ko00520,ko00550,ko01100,map00520,map00550,map01100 R03191,R03192 RC02639 ko00000,ko00001,ko01000,ko01011 Bacteria 1TP3W@1239,4HAD8@91061,COG0812@1,COG0812@2 NA|NA|NA M cell wall formation IIAPBPCI_02148 322159.STER_1498 2.9e-87 327.8 Bacilli folK 2.7.6.3,4.1.2.25 ko:K00950,ko:K13940 ko00790,ko01100,map00790,map01100 M00126,M00841 R03503,R03504 RC00002,RC00017,RC00721,RC00943 ko00000,ko00001,ko00002,ko01000 Bacteria 1V6PR@1239,4HIMG@91061,COG0801@1,COG0801@2 NA|NA|NA H 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase IIAPBPCI_02149 322159.STER_1499 7.6e-61 239.6 Bacilli folB 1.13.11.81,2.5.1.15,2.7.6.3,4.1.2.25,5.1.99.8 ko:K00796,ko:K00950,ko:K01633,ko:K13940 ko00790,ko01100,map00790,map01100 M00126,M00840,M00841 R03066,R03067,R03503,R03504,R11037,R11073 RC00002,RC00017,RC00121,RC00721,RC00842,RC00943,RC01479,RC03333,RC03334 ko00000,ko00001,ko00002,ko01000 Bacteria 1VA0I@1239,4HKKK@91061,COG1539@1,COG1539@2 NA|NA|NA H Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin IIAPBPCI_02150 264199.stu1542 3e-297 1026.9 Bacilli amy 3.2.1.1 ko:K01176 ko00500,ko01100,ko04973,map00500,map01100,map04973 R02108,R02112,R11262 ko00000,ko00001,ko01000 GH13 Bacteria 1TRKZ@1239,4HC8C@91061,COG0366@1,COG0366@2 NA|NA|NA G Belongs to the glycosyl hydrolase 13 family IIAPBPCI_02151 264199.stu1543 7e-147 526.6 Bacilli folP GO:0003674,GO:0003824,GO:0004156,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009396,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042398,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.15,2.7.6.3 ko:K00796,ko:K13941 ko00790,ko01100,map00790,map01100 M00126,M00840,M00841 R03066,R03067,R03503 RC00002,RC00017,RC00121,RC00842 ko00000,ko00001,ko00002,ko01000 iHN637.CLJU_RS03115 Bacteria 1TPKT@1239,4H9SY@91061,COG0294@1,COG0294@2 NA|NA|NA H Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives IIAPBPCI_02152 264199.stu1544 1e-99 369.4 Bacilli folE GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003933,GO:0003934,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006066,GO:0006725,GO:0006729,GO:0006732,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009108,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019238,GO:0019438,GO:0019751,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034311,GO:0034312,GO:0034641,GO:0035639,GO:0036094,GO:0040007,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046146,GO:0046165,GO:0046173,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 3.5.4.16 ko:K01495 ko00790,ko01100,map00790,map01100 M00126,M00841,M00842,M00843 R00428,R04639,R05046,R05048 RC00263,RC00294,RC00323,RC00945,RC01188 ko00000,ko00001,ko00002,ko01000 iNJ661.Rv3609c Bacteria 1TRNM@1239,4HAXS@91061,COG0302@1,COG0302@2 NA|NA|NA F gtp cyclohydrolase IIAPBPCI_02153 322159.STER_1503 0.0 1163.7 Bacilli ydaO GO:0003333,GO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0006865,GO:0008150,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015179,GO:0015291,GO:0015297,GO:0015318,GO:0015711,GO:0015807,GO:0015849,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0046942,GO:0046943,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098656,GO:1902475,GO:1903825,GO:1905039 Bacteria 1TQE1@1239,4HAZH@91061,COG0531@1,COG0531@2 NA|NA|NA E amino acid IIAPBPCI_02154 264199.stu1546 5.5e-239 833.2 Bacilli folC 6.3.2.12,6.3.2.17 ko:K11754 ko00790,ko01100,map00790,map01100 M00126,M00841 R00942,R02237,R04241 RC00064,RC00090,RC00162 ko00000,ko00001,ko00002,ko01000 iLJ478.TM0166 Bacteria 1TPX5@1239,4HBJM@91061,COG0285@1,COG0285@2 NA|NA|NA H Belongs to the folylpolyglutamate synthase family IIAPBPCI_02155 264199.stu1547 4.1e-37 160.2 Bacteria ylqC ko:K06960 ko00000 Bacteria COG1837@1,COG1837@2 NA|NA|NA L Belongs to the UPF0109 family IIAPBPCI_02156 1046629.Ssal_00517 2.4e-43 181.0 Bacilli rpsP GO:0000028,GO:0000217,GO:0000400,GO:0003674,GO:0003676,GO:0003677,GO:0003735,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006259,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0016787,GO:0016788,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 ko:K02959 ko03010,map03010 M00178 br01610,ko00000,ko00001,ko00002,ko03011,ko03029 Bacteria 1VA0X@1239,4HKNN@91061,COG0228@1,COG0228@2 NA|NA|NA J Belongs to the bacterial ribosomal protein bS16 family IIAPBPCI_02157 322159.STER_1507 6.9e-172 609.8 Bacilli tehB GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0010035,GO:0016740,GO:0016741,GO:0032259,GO:0042221,GO:0044424,GO:0044444,GO:0044464,GO:0046690,GO:0050896 2.1.1.265 ko:K03647,ko:K16868 ko00000,ko01000 Bacteria 1TSZK@1239,4HJT1@91061,COG0500@1,COG0500@2,COG3615@1,COG3615@2 NA|NA|NA PQ tellurite resistance protein tehb IIAPBPCI_02158 264199.stu1550 1e-156 559.3 Bacilli xth GO:0003674,GO:0003824,GO:0003906,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008296,GO:0008309,GO:0008311,GO:0008408,GO:0009987,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360 3.1.11.2 ko:K01142 ko03410,map03410 ko00000,ko00001,ko01000,ko03400 Bacteria 1TPFB@1239,4HAIU@91061,COG0708@1,COG0708@2 NA|NA|NA L exodeoxyribonuclease III IIAPBPCI_02159 322159.STER_1509 2.1e-74 285.0 Firmicutes Bacteria 1V99E@1239,COG4708@1,COG4708@2 NA|NA|NA S QueT transporter IIAPBPCI_02160 264199.stu1552 1.7e-119 435.3 Bacilli ribD 1.1.1.193,3.5.4.26 ko:K00082,ko:K11752 ko00740,ko01100,ko01110,ko02024,map00740,map01100,map01110,map02024 M00125 R03458,R03459 RC00204,RC00933 ko00000,ko00001,ko00002,ko01000 iLJ478.TM1828 Bacteria 1UHQR@1239,4IS6G@91061,COG1985@1,COG1985@2 NA|NA|NA L Transposase DDE domain IIAPBPCI_02161 322159.STER_1512 1.9e-186 658.3 Bacilli yegS GO:0001727,GO:0003674,GO:0003824,GO:0004143,GO:0006629,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0030258,GO:0044237,GO:0044238,GO:0044255,GO:0046834,GO:0071704 2.7.1.107 ko:K07029 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 R02240 RC00002,RC00017 ko00000,ko00001,ko01000 Bacteria 1TQAU@1239,4H9WD@91061,COG1597@1,COG1597@2 NA|NA|NA I Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase IIAPBPCI_02162 264199.stu1554 0.0 1238.4 Bacilli ligA GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 6.5.1.2 ko:K01972 ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430 R00382 RC00005 ko00000,ko00001,ko01000,ko03032,ko03400 Bacteria 1TPQ3@1239,4HA1D@91061,COG0272@1,COG0272@2 NA|NA|NA L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA IIAPBPCI_02163 264199.stu1555 1.3e-85 322.4 Bacilli ccl GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 Bacteria 1V22G@1239,4HGG2@91061,COG4708@1,COG4708@2 NA|NA|NA S cog cog4708 IIAPBPCI_02164 322159.STER_1515 2.4e-159 568.2 Bacilli rbn ko:K07058 ko00000 Bacteria 1U7HM@1239,4H9MJ@91061,COG1295@1,COG1295@2 NA|NA|NA E Belongs to the UPF0761 family IIAPBPCI_02165 322159.STER_1516 7.2e-166 589.7 Bacilli map GO:0000096,GO:0003674,GO:0003824,GO:0004177,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006464,GO:0006508,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008198,GO:0008233,GO:0008235,GO:0008237,GO:0008238,GO:0009066,GO:0009987,GO:0010467,GO:0016151,GO:0016485,GO:0016787,GO:0019538,GO:0019752,GO:0030145,GO:0035551,GO:0036211,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0050897,GO:0051604,GO:0070006,GO:0070011,GO:0070084,GO:0071704,GO:0140096,GO:1901564,GO:1901605 3.4.11.18 ko:K01265 ko00000,ko01000,ko01002 Bacteria 1TQC1@1239,4H9S9@91061,COG0024@1,COG0024@2 NA|NA|NA E Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed IIAPBPCI_02166 322159.STER_1517 2.8e-230 804.3 Bacilli ytoI Bacteria 1TPU6@1239,4HB62@91061,COG4109@1,COG4109@2 NA|NA|NA K transcriptional regulator containing CBS domains IIAPBPCI_02167 322159.STER_1518 1.5e-97 362.1 Bacilli XK27_07830 2.3.1.128 ko:K03790 ko00000,ko01000,ko03009 Bacteria 1V576@1239,4HH6U@91061,COG1670@1,COG1670@2 NA|NA|NA J Acetyltransferase GNAT Family IIAPBPCI_02168 322159.STER_0151 2.5e-231 807.7 Firmicutes ko:K07485 ko00000 Bacteria 1TQ93@1239,COG3464@1,COG3464@2 NA|NA|NA L Transposase IIAPBPCI_02169 322159.STER_1519 1.6e-233 815.1 Bacilli murA GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008760,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016740,GO:0016765,GO:0030203,GO:0034645,GO:0042221,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046677,GO:0050896,GO:0051716,GO:0070589,GO:0070887,GO:0071236,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 2.5.1.7 ko:K00790 ko00520,ko00550,ko01100,map00520,map00550,map01100 R00660 RC00350 ko00000,ko00001,ko01000,ko01011 iYO844.BSU37100 Bacteria 1TPAU@1239,4H9KI@91061,COG0766@1,COG0766@2 NA|NA|NA M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine IIAPBPCI_02170 322159.STER_1520 0.0 1456.0 Bacilli comEC ko:K02238 M00429 ko00000,ko00002,ko02044 3.A.11.1,3.A.11.2 Bacteria 1TS9U@1239,4H9M4@91061,COG0658@1,COG0658@2,COG2333@1,COG2333@2 NA|NA|NA S Competence protein ComEC IIAPBPCI_02171 322159.STER_1521 3e-98 364.8 Bacilli comEA ko:K02237 M00429 ko00000,ko00002,ko02044 3.A.11.1,3.A.11.2 Bacteria 1VA3W@1239,4HKJ1@91061,COG1555@1,COG1555@2 NA|NA|NA L COG1555 DNA uptake protein and related DNA-binding proteins IIAPBPCI_02172 322159.STER_1522 1.7e-142 511.9 Bacilli plsC GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0008374,GO:0016020,GO:0016411,GO:0016740,GO:0016746,GO:0016747,GO:0042171,GO:0044464,GO:0071617,GO:0071944 2.3.1.51 ko:K00655 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 M00089 R02241,R09381 RC00004,RC00037,RC00039 ko00000,ko00001,ko00002,ko01000,ko01004 Bacteria 1U8N2@1239,4HDQR@91061,COG0204@1,COG0204@2 NA|NA|NA I Acyltransferase IIAPBPCI_02173 435842.HMPREF0848_01183 1.8e-140 505.4 Bacilli nodB3 Bacteria 1TYRH@1239,4HHQN@91061,COG0726@1,COG0726@2 NA|NA|NA G deacetylase IIAPBPCI_02174 322159.STER_1524 7.1e-141 506.5 Bacilli yabB GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016740,GO:0016741,GO:0032259,GO:0044424,GO:0044444,GO:0044464 2.1.1.223 ko:K07461,ko:K15460 ko00000,ko01000,ko03016 Bacteria 1TQ25@1239,4HA8W@91061,COG4123@1,COG4123@2 NA|NA|NA L Methyltransferase IIAPBPCI_02175 264199.stu1567 1e-41 175.6 Bacilli yazA ko:K07461 ko00000 Bacteria 1VEZF@1239,4HNHJ@91061,COG2827@1,COG2827@2 NA|NA|NA L endonuclease containing a URI domain IIAPBPCI_02176 322159.STER_1526 6.9e-223 780.0 Bacilli cshA GO:0000166,GO:0003674,GO:0003676,GO:0003723,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006725,GO:0006807,GO:0006950,GO:0008026,GO:0008144,GO:0008150,GO:0008152,GO:0008186,GO:0009266,GO:0009295,GO:0009409,GO:0009628,GO:0009987,GO:0010501,GO:0016020,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043590,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0070035,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:1901265,GO:1901360,GO:1901363 3.6.4.13 ko:K05592,ko:K18692 ko03018,map03018 ko00000,ko00001,ko01000,ko03009,ko03019 Bacteria 1TPAP@1239,4HAB3@91061,COG0513@1,COG0513@2 NA|NA|NA JKL DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity IIAPBPCI_02177 264199.stu1569 1.5e-153 548.9 Bacilli corA ko:K03284 ko00000,ko02000 1.A.35.1,1.A.35.3 Bacteria 1TPI8@1239,4HCQ6@91061,COG0598@1,COG0598@2 NA|NA|NA P CorA-like protein IIAPBPCI_02178 264199.stu1570 2.5e-62 244.6 Bacilli yjqA Bacteria 1V77G@1239,3172B@2,4HJ0W@91061,arCOG12631@1 NA|NA|NA S Bacterial PH domain IIAPBPCI_02179 322159.STER_1529 2.3e-99 368.2 Bacilli thiT ko:K16789 ko00000,ko02000 2.A.88.3 Bacteria 1V6YE@1239,4HIJE@91061,COG3859@1,COG3859@2 NA|NA|NA S Thiamine transporter IIAPBPCI_02180 322159.STER_0151 2.1e-230 804.7 Firmicutes ko:K07485 ko00000 Bacteria 1TQ93@1239,COG3464@1,COG3464@2 NA|NA|NA L Transposase IIAPBPCI_02181 322159.STER_1532 3.1e-300 1036.9 Bacilli prfC GO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0016150,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 ko:K02837,ko:K07133 ko00000,ko03012 Bacteria 1TPYT@1239,4HADS@91061,COG4108@1,COG4108@2 NA|NA|NA J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP IIAPBPCI_02182 322159.STER_1533 7.1e-121 439.9 Bacteria ywaF Bacteria COG5522@1,COG5522@2 NA|NA|NA S Integral membrane protein (intg_mem_TP0381) IIAPBPCI_02183 322159.STER_1534 1.7e-257 894.8 Bacilli murF 6.3.2.10 ko:K01929 ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502 R04573,R04617 RC00064,RC00141 ko00000,ko00001,ko01000,ko01011 Bacteria 1VT78@1239,4HACR@91061,COG0770@1,COG0770@2 NA|NA|NA M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein IIAPBPCI_02187 322159.STER_1539 1.1e-155 555.8 Bacilli cjaA ko:K02030 M00236 ko00000,ko00002,ko02000 3.A.1.3 Bacteria 1TT11@1239,4HFBQ@91061,COG0834@1,COG0834@2 NA|NA|NA ET ABC transporter substrate-binding protein IIAPBPCI_02188 264199.stu1580 1.7e-134 485.3 Bacilli glnQ 3.6.3.21 ko:K02028 M00236 ko00000,ko00002,ko01000,ko02000 3.A.1.3 Bacteria 1TNYD@1239,4HDK7@91061,COG1126@1,COG1126@2 NA|NA|NA E abc transporter atp-binding protein IIAPBPCI_02189 1046629.Ssal_00474 3e-106 391.3 Bacilli ko:K02029 M00236 ko00000,ko00002,ko02000 3.A.1.3 Bacteria 1TR7R@1239,4HGVA@91061,COG0765@1,COG0765@2 NA|NA|NA P ABC transporter (Permease IIAPBPCI_02190 264199.stu1582 3.9e-114 417.5 Bacilli papP ko:K02029 M00236 ko00000,ko00002,ko02000 3.A.1.3 Bacteria 1TRU3@1239,4HGE1@91061,COG0765@1,COG0765@2 NA|NA|NA P ABC transporter (Permease IIAPBPCI_02191 322159.STER_1544 1.7e-193 681.8 Bacilli ddl 6.3.2.4 ko:K01921 ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502 R01150 RC00064,RC00141 ko00000,ko00001,ko01000,ko01011 Bacteria 1TP2Y@1239,4H9KB@91061,COG1181@1,COG1181@2 NA|NA|NA F Belongs to the D-alanine--D-alanine ligase family IIAPBPCI_02192 264199.stu1584 4.7e-31 139.8 Bacilli copZ GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006810,GO:0006811,GO:0006812,GO:0006873,GO:0006875,GO:0008150,GO:0009987,GO:0019725,GO:0030001,GO:0030003,GO:0042592,GO:0043167,GO:0043169,GO:0044424,GO:0044464,GO:0046872,GO:0046914,GO:0046916,GO:0048878,GO:0050801,GO:0051179,GO:0051234,GO:0055065,GO:0055076,GO:0055080,GO:0055082,GO:0065007,GO:0065008,GO:0098771 2.7.7.77 ko:K03752,ko:K07213,ko:K08364 ko00790,ko01100,ko04978,map00790,map01100,map04978 R11581 ko00000,ko00001,ko01000,ko02000 1.A.72.1 Bacteria 1VK5F@1239,4HR1Z@91061,COG2608@1,COG2608@2 NA|NA|NA P Heavy metal-associated domain protein IIAPBPCI_02193 322159.STER_1546 0.0 1315.4 Bacilli copA GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 3.6.3.54 ko:K17686 ko01524,ko04016,map01524,map04016 R00086 RC00002 ko00000,ko00001,ko01000 3.A.3.5 Bacteria 1TP5S@1239,4HAI0@91061,COG2217@1,COG2217@2 NA|NA|NA P P-type ATPase IIAPBPCI_02194 322159.STER_1547 2.7e-73 281.2 Bacilli copY Bacteria 1VA7Q@1239,4HKGF@91061,COG3682@1,COG3682@2 NA|NA|NA K Copper transport repressor, CopY TcrY family IIAPBPCI_02195 264199.stu1587 6e-143 513.5 Bacilli trpA 4.2.1.20 ko:K01695 ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230 M00023 R00674,R02340,R02722 RC00209,RC00210,RC00700,RC00701,RC02868 ko00000,ko00001,ko00002,ko01000 Bacteria 1TPXA@1239,4HFQ8@91061,COG0159@1,COG0159@2 NA|NA|NA E The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate IIAPBPCI_02196 322159.STER_1549 3.8e-229 800.4 Bacilli trpB GO:0000162,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.2.1.20,5.3.1.24 ko:K01696,ko:K01817 ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230 M00023 R00674,R02340,R02722,R03509 RC00209,RC00210,RC00700,RC00701,RC00945,RC02868 ko00000,ko00001,ko00002,ko01000 iYO844.BSU22640 Bacteria 1TPI3@1239,4H9WC@91061,COG0133@1,COG0133@2 NA|NA|NA E The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine IIAPBPCI_02197 322159.STER_1550 5.5e-101 373.6 Bacilli trpF GO:0000162,GO:0003674,GO:0003824,GO:0004425,GO:0004640,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016829,GO:0016830,GO:0016831,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.1.1.48,4.2.1.160,4.2.1.20,5.3.1.24 ko:K01696,ko:K01817,ko:K13498,ko:K22100 ko00260,ko00400,ko00790,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map00790,map01100,map01110,map01130,map01230 M00023,M00840 R00674,R02340,R02722,R03508,R03509,R11072 RC00209,RC00210,RC00700,RC00701,RC00944,RC00945,RC02868,RC03343 ko00000,ko00001,ko00002,ko01000 iJN678.trpF,iPC815.YPO2205,iSBO_1134.SBO_1804,iSDY_1059.SDY_1330 Bacteria 1V6Y0@1239,4HK18@91061,COG0135@1,COG0135@2 NA|NA|NA E belongs to the TrpF family IIAPBPCI_02198 322159.STER_1551 8.5e-134 483.0 Bacilli trpC GO:0003674,GO:0003824,GO:0004425,GO:0016829,GO:0016830,GO:0016831 4.1.1.48,5.3.1.24 ko:K01609,ko:K01817,ko:K13498 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00023 R03508,R03509 RC00944,RC00945 ko00000,ko00001,ko00002,ko01000 Bacteria 1TR94@1239,4HG9K@91061,COG0134@1,COG0134@2 NA|NA|NA E Belongs to the TrpC family IIAPBPCI_02199 322159.STER_1552 7.8e-180 636.3 Bacilli trpD GO:0000162,GO:0003674,GO:0003824,GO:0004048,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.18,4.1.3.27 ko:K00766,ko:K13497 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00023 R00985,R00986,R01073 RC00010,RC00440,RC02148,RC02414 ko00000,ko00001,ko00002,ko01000 Bacteria 1TP8U@1239,4H9KQ@91061,COG0547@1,COG0547@2 NA|NA|NA F Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) IIAPBPCI_02200 322159.STER_1553 1.2e-105 389.0 Bacilli trpG 2.4.2.18,2.6.1.85,4.1.3.27 ko:K00766,ko:K01658,ko:K01664,ko:K13497 ko00400,ko00405,ko00790,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map00790,map01100,map01110,map01130,map01230,map02024,map02025 M00023 R00985,R00986,R01073,R01716 RC00010,RC00440,RC01418,RC02148,RC02414 ko00000,ko00001,ko00002,ko01000 Bacteria 1V4RM@1239,4HHD8@91061,COG0512@1,COG0512@2 NA|NA|NA EH anthranilate IIAPBPCI_02201 264199.stu1593 2e-255 887.9 Bacilli trpE GO:0000162,GO:0003674,GO:0003824,GO:0004049,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005950,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016829,GO:0016830,GO:0016833,GO:0018130,GO:0019438,GO:0019752,GO:0032991,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494 4.1.3.27 ko:K01657 ko00400,ko00405,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map01100,map01110,map01130,map01230,map02024,map02025 M00023 R00985,R00986 RC00010,RC02148,RC02414 ko00000,ko00001,ko00002,ko01000 Bacteria 1TQAP@1239,4HB31@91061,COG0147@1,COG0147@2 NA|NA|NA EH Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia IIAPBPCI_02202 322159.STER_1555 1.8e-41 174.9 Bacteria pchB 2.5.1.19,4.2.1.10,4.2.99.21,5.4.99.5 ko:K00800,ko:K03785,ko:K04092,ko:K04782 ko00400,ko01053,ko01100,ko01110,ko01130,ko01230,map00400,map01053,map01100,map01110,map01130,map01230 M00022,M00024,M00025 R01715,R03084,R03460,R06602 RC00350,RC00848,RC01549,RC02148,RC03116 ko00000,ko00001,ko00002,ko01000 Bacteria COG1605@1,COG1605@2 NA|NA|NA E Chorismate mutase IIAPBPCI_02203 1046629.Ssal_00451 2.7e-55 221.1 Bacilli Bacteria 1VCIA@1239,2C4MC@1,32RSW@2,4HKKA@91061 NA|NA|NA IIAPBPCI_02204 264199.stu1596 0.0 1476.1 Bacilli ctpE ko:K12952 ko00000,ko01000 3.A.3.23 Bacteria 1TPF5@1239,4H9ZI@91061,COG0474@1,COG0474@2 NA|NA|NA P E1-E2 ATPase IIAPBPCI_02205 563038.HMPREF0851_01449 1.6e-27 129.0 Bacilli Bacteria 1W3A8@1239,2DEIC@1,2ZN3X@2,4HZMP@91061 NA|NA|NA IIAPBPCI_02206 1346.DQ08_00960 1.7e-67 261.9 Bacilli ko:K07497 ko00000 Bacteria 1TU21@1239,4HDK4@91061,COG2801@1,COG2801@2 NA|NA|NA L COG2801 Transposase and inactivated derivatives IIAPBPCI_02207 1095726.HMPREF1116_0267 1.5e-101 375.6 Bacteria yiiE Bacteria COG3548@1,COG3548@2 NA|NA|NA S protein homotetramerization IIAPBPCI_02209 322159.STER_1959 8.2e-27 125.9 Bacilli Bacteria 1VENK@1239,4HNKV@91061,COG2261@1,COG2261@2 NA|NA|NA S Membrane IIAPBPCI_02210 525379.HMPREF0819_1359 3.3e-31 140.6 Bacilli Bacteria 1VK2R@1239,2ED8H@1,33752@2,4HQ99@91061 NA|NA|NA IIAPBPCI_02211 322159.STER_1960 4.5e-39 166.8 Bacilli Bacteria 1VK2R@1239,2ED8H@1,33752@2,4HQ99@91061 NA|NA|NA IIAPBPCI_02212 1116231.SMA_0314 9.7e-22 108.6 Bacteria Bacteria COG5547@1,COG5547@2 NA|NA|NA S Small integral membrane protein IIAPBPCI_02213 264199.stu1986 9e-77 293.1 Bacteria Bacteria COG1302@1,COG1302@2 NA|NA|NA M Protein conserved in bacteria IIAPBPCI_02214 525379.HMPREF0819_1362 1e-09 68.9 Bacteria Bacteria COG3237@1,COG3237@2 NA|NA|NA K CsbD-like IIAPBPCI_02215 888821.HMPREF9394_0461 6.7e-125 454.1 Bacilli gltT ko:K03309,ko:K11102 ko00000,ko02000 2.A.23,2.A.23.1.1,2.A.23.1.2 Bacteria 1TPME@1239,4H9T7@91061,COG1301@1,COG1301@2 NA|NA|NA C Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family IIAPBPCI_02216 1005705.HMPREF9967_1422 1.4e-135 489.2 Streptococcus infantis Bacteria 1TSHN@1239,43FXH@68892,4HBFG@91061,COG0189@1,COG0189@2 NA|NA|NA HJ the current gene model (or a revised gene model) may contain a frame shift IIAPBPCI_02217 1116231.SMA_1382 6.8e-195 686.4 Bacilli Bacteria 1TP4C@1239,4HAXJ@91061,COG3328@1,COG3328@2 NA|NA|NA L Transposase IIAPBPCI_02218 1116231.SMA_0321 9.9e-29 132.1 Bacilli Bacteria 1TP4C@1239,4HAXJ@91061,COG3328@1,COG3328@2 NA|NA|NA L Transposase IIAPBPCI_02219 264199.stu1598 1.2e-43 182.2 Bacilli yaaK ko:K09747 ko00000 Bacteria 1VA1S@1239,4HKH3@91061,COG0718@1,COG0718@2 NA|NA|NA S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection IIAPBPCI_02220 264199.stu1599 5.1e-47 193.4 Bacilli Bacteria 1VFYX@1239,4HNKT@91061,COG2963@1,COG2963@2 NA|NA|NA L transposase activity IIAPBPCI_02221 904306.HMPREF9192_0780 6e-121 440.3 Bacilli Bacteria 1UZ0H@1239,4HGGU@91061,COG0789@1,COG0789@2 NA|NA|NA K transcriptional regulator, MerR family IIAPBPCI_02222 264199.stu1601 1.3e-102 379.0 Bacilli dnaQ 2.7.7.7 ko:K02342 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 Bacteria 1V8EQ@1239,4HJYT@91061,COG0847@1,COG0847@2 NA|NA|NA L DNA polymerase III IIAPBPCI_02223 264199.stu1602 9.1e-42 176.8 Bacilli WQ51_02910 Bacteria 1VNC1@1239,2EHT6@1,33BIW@2,4HRJ5@91061 NA|NA|NA S Protein of unknown function, DUF536 IIAPBPCI_02224 264199.stu1603 4.8e-63 246.9 Bacilli XK27_02560 ko:K02612 ko00360,ko01120,map00360,map01120 R09838 RC02690 ko00000,ko00001 Bacteria 1VX9Z@1239,4HXCM@91061,COG2151@1,COG2151@2 NA|NA|NA S cog cog2151 IIAPBPCI_02225 264199.stu1604 0.0 1133.6 Bacilli ilvD GO:0003674,GO:0003824,GO:0004160,GO:0016829,GO:0016835,GO:0016836 4.2.1.9 ko:K01687 ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230 M00019,M00570 R01209,R04441,R05070 RC00468,RC01714 ko00000,ko00001,ko00002,ko01000 Bacteria 1TP1R@1239,4H9ZG@91061,COG0129@1,COG0129@2 NA|NA|NA E Belongs to the IlvD Edd family IIAPBPCI_02226 264199.stu1605 3.8e-226 790.4 Bacilli ytfP ko:K07007 ko00000 Bacteria 1TQ6E@1239,4HAAT@91061,COG2081@1,COG2081@2 NA|NA|NA S Flavoprotein IIAPBPCI_02228 264199.stu1606 3.4e-120 437.6 Bacilli trmB GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008176,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0034708,GO:0036265,GO:0040007,GO:0043170,GO:0043412,GO:0043414,GO:0043527,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0106004,GO:0140098,GO:0140101,GO:1901360,GO:1902494,GO:1990234 2.1.1.297,2.1.1.33 ko:K02493,ko:K03439 R10806 RC00003,RC03279 ko00000,ko01000,ko03012,ko03016 Bacteria 1TQCA@1239,4HC08@91061,COG0220@1,COG0220@2 NA|NA|NA J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA IIAPBPCI_02229 264199.stu1607 1.2e-151 542.3 Bacilli ytmP 2.7.1.89 ko:K07251 ko00730,ko01100,map00730,map01100 R02134 RC00002,RC00017 ko00000,ko00001,ko01000 Bacteria 1UMFY@1239,4HBF9@91061,COG0510@1,COG0510@2 NA|NA|NA M Phosphotransferase IIAPBPCI_02230 322159.STER_1571 4.3e-181 640.6 Bacilli ecsB ko:K01992 M00254 ko00000,ko00002,ko02000 3.A.1 Bacteria 1V1VG@1239,4HG1K@91061,COG4473@1,COG4473@2 NA|NA|NA U ABC transporter IIAPBPCI_02231 264199.stu1609 1.1e-130 472.6 Bacilli ecsA ko:K01990 M00254 ko00000,ko00002,ko02000 3.A.1 Bacteria 1TQIH@1239,4HA2B@91061,COG1131@1,COG1131@2 NA|NA|NA V abc transporter atp-binding protein IIAPBPCI_02232 322159.STER_1573 1.1e-69 269.2 Bacilli hit ko:K02503 ko00000,ko04147 Bacteria 1V9ZJ@1239,4HIG2@91061,COG0537@1,COG0537@2 NA|NA|NA FG Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases IIAPBPCI_02233 1000588.HMPREF9965_1970 1.9e-09 68.6 Streptococcus mitis Bacteria 1U4H8@1239,2DKCI@1,2TPVV@28037,30963@2,4IE92@91061 NA|NA|NA IIAPBPCI_02235 435842.HMPREF0848_01249 1.1e-19 102.8 Bacilli Bacteria 1VI51@1239,2E9BR@1,333JH@2,4HQRQ@91061 NA|NA|NA IIAPBPCI_02236 1008453.HMPREF9957_0290 6.3e-07 60.8 Streptococcus mitis Bacteria 1UD5G@1239,2DIAX@1,2TNYQ@28037,302KA@2,4IE19@91061 NA|NA|NA IIAPBPCI_02237 322159.STER_0367 1.5e-222 778.5 Bacilli Bacteria 1TP4C@1239,4HAXJ@91061,COG3328@1,COG3328@2 NA|NA|NA L Transposase IIAPBPCI_02238 264199.stu1614 0.0 1320.8 Bacilli clpL ko:K04086 ko00000,ko03110 Bacteria 1TRHP@1239,4HAHZ@91061,COG0542@1,COG0542@2 NA|NA|NA O ATP-dependent Clp protease ATP-binding subunit IIAPBPCI_02239 322159.STER_1579 1.9e-200 704.9 Bacilli ylbM Bacteria 1TPP2@1239,4HAZJ@91061,COG1323@1,COG1323@2 NA|NA|NA S Belongs to the UPF0348 family IIAPBPCI_02240 322159.STER_1580 2e-140 505.0 Bacilli yqeM Bacteria 1V24K@1239,4HDFY@91061,COG0500@1,COG2226@2 NA|NA|NA Q Methyltransferase domain protein IIAPBPCI_02241 322159.STER_1581 6e-58 229.9 Bacilli rsfS GO:0003674,GO:0005488,GO:0006417,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0017148,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0034248,GO:0034249,GO:0043021,GO:0043023,GO:0044087,GO:0044877,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0080090,GO:0090069,GO:0090071,GO:2000112,GO:2000113 ko:K09710 ko00000,ko03009 Bacteria 1VA2Z@1239,4HKEJ@91061,COG0799@1,COG0799@2 NA|NA|NA J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation IIAPBPCI_02242 264199.stu1618 4e-107 394.0 Bacilli nadD 2.7.6.3,2.7.7.18 ko:K00950,ko:K00969,ko:K06950 ko00760,ko00790,ko01100,map00760,map00790,map01100 M00115,M00126,M00841 R00137,R03005,R03503 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 Bacteria 1V6Y1@1239,4HHRY@91061,COG1713@1,COG1713@2 NA|NA|NA H HD superfamily hydrolase involved in NAD metabolism IIAPBPCI_02243 264199.stu1619 1.7e-116 425.2 Bacilli nadD GO:0000309,GO:0003674,GO:0003824,GO:0004515,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0040007,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.7.18,3.6.1.55 ko:K00969,ko:K03574 ko00760,ko01100,map00760,map01100 M00115 R00137,R03005 RC00002 ko00000,ko00001,ko00002,ko01000,ko03400 Bacteria 1V3SK@1239,4HGXK@91061,COG1057@1,COG1057@2 NA|NA|NA H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) IIAPBPCI_02244 264199.stu1620 3.5e-49 200.7 Bacilli yhbY GO:0000027,GO:0000028,GO:0000966,GO:0000967,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016072,GO:0022607,GO:0022613,GO:0022618,GO:0034470,GO:0034471,GO:0034622,GO:0034641,GO:0034660,GO:0042254,GO:0042255,GO:0042273,GO:0042274,GO:0043021,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:1901360,GO:1990275 ko:K07574 ko00000,ko03009 Bacteria 1VEGM@1239,4HKC7@91061,COG1534@1,COG1534@2 NA|NA|NA J RNA-binding protein IIAPBPCI_02245 322159.STER_1585 7.1e-214 749.6 Bacilli yqeH GO:0003674,GO:0003824,GO:0003924,GO:0006275,GO:0008150,GO:0008156,GO:0009889,GO:0009890,GO:0009892,GO:0010556,GO:0010558,GO:0010605,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0019219,GO:0019222,GO:0022613,GO:0030174,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032297,GO:0042254,GO:0044085,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051052,GO:0051053,GO:0051171,GO:0051172,GO:0060255,GO:0065007,GO:0071840,GO:0080090,GO:0090329,GO:2000104,GO:2000112,GO:2000113 ko:K06948 ko00000,ko03009 Bacteria 1TPM2@1239,4HAAF@91061,COG1161@1,COG1161@2 NA|NA|NA S in Bacillus subtilis this enzyme appears to be involved in 30S ribosomal RNA subunit biogenesis IIAPBPCI_02246 264199.stu1622 1.8e-98 365.2 Bacilli yqeG ko:K07015 ko00000 Bacteria 1V6KM@1239,4HGAV@91061,COG2179@1,COG2179@2 NA|NA|NA S hydrolase of the HAD superfamily IIAPBPCI_02247 264199.stu1623 4.7e-62 243.8 Bacilli yicL Bacteria 1TR6G@1239,4HAMD@91061,COG0697@1,COG0697@2 NA|NA|NA EG COG0697 Permeases of the drug metabolite transporter (DMT) superfamily IIAPBPCI_02248 322159.STER_1587 4.5e-80 303.9 Bacilli yicL Bacteria 1TR6G@1239,4HAMD@91061,COG0697@1,COG0697@2 NA|NA|NA EG COG0697 Permeases of the drug metabolite transporter (DMT) superfamily IIAPBPCI_02249 264199.stu1624 2.1e-64 251.5 Firmicutes Bacteria 1VBNR@1239,2B9ZC@1,323D0@2 NA|NA|NA IIAPBPCI_02250 322159.STER_1590 5.1e-273 946.4 Bacilli gatB GO:0003674,GO:0003824,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016879,GO:0016884,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0050567,GO:0070681,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.1.1.12,6.3.5.6,6.3.5.7 ko:K01876,ko:K02434 ko00970,ko01100,map00970,map01100 M00359,M00360 R03905,R04212,R05577 RC00010,RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 Bacteria 1TPG3@1239,4HAFB@91061,COG0064@1,COG0064@2 NA|NA|NA J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) IIAPBPCI_02251 264199.stu1626 1.6e-269 934.9 Bacilli gatA 6.3.5.6,6.3.5.7 ko:K02433 ko00970,ko01100,map00970,map01100 R03905,R04212 RC00010 ko00000,ko00001,ko01000,ko03029 Bacteria 1TP0C@1239,4HBAZ@91061,COG0154@1,COG0154@2 NA|NA|NA J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) IIAPBPCI_02252 1046629.Ssal_00409 1.4e-47 195.3 Bacilli gatC 6.3.5.6,6.3.5.7 ko:K02435 ko00970,ko01100,map00970,map01100 R03905,R04212 RC00010 ko00000,ko00001,ko01000,ko03029 iAF987.Gmet_0076 Bacteria 1VEK3@1239,4HNNA@91061,COG0721@1,COG0721@2 NA|NA|NA J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) IIAPBPCI_02253 904306.HMPREF9192_0728 1.5e-258 898.3 Bacilli ascB 3.2.1.86 ko:K01223 ko00010,ko00500,map00010,map00500 R00839,R05133,R05134 RC00049,RC00171,RC00714 ko00000,ko00001,ko01000 GT1 Bacteria 1TP19@1239,4HA1W@91061,COG2723@1,COG2723@2 NA|NA|NA G Belongs to the glycosyl hydrolase 1 family IIAPBPCI_02254 264199.stu1632 3.7e-60 237.3 Bacilli msrA 1.8.4.11,1.8.4.12 ko:K07304,ko:K12267 ko00000,ko01000 Bacteria 1TQ3E@1239,4HAIV@91061,COG0225@1,COG0225@2 NA|NA|NA O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine IIAPBPCI_02255 264199.stu1633 4.1e-122 444.1 Bacilli hlpA ko:K02073 ko02010,map02010 M00238 ko00000,ko00001,ko00002,ko02000 3.A.1.24 Bacteria 1TQAS@1239,4HCTA@91061,COG1464@1,COG1464@2 NA|NA|NA M Belongs to the NlpA lipoprotein family IIAPBPCI_02256 322159.STER_1598 9.8e-100 369.4 Bacilli pncA ko:K16788 ko00000,ko02000 2.A.88.5 iSB619.SA_RS09955 Bacteria 1V1CY@1239,4HFRS@91061,COG1335@1,COG1335@2 NA|NA|NA Q isochorismatase IIAPBPCI_02257 264199.stu1635 2.8e-140 504.6 Bacilli codY GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0032991,GO:0032993,GO:0043565,GO:0044212,GO:0044424,GO:0044464,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1990837,GO:2000112,GO:2000113,GO:2001141 ko:K03706 ko00000,ko03000 Bacteria 1TS7A@1239,4HA9U@91061,COG4465@1,COG4465@2 NA|NA|NA K DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor IIAPBPCI_02258 322159.STER_1600 3.7e-240 837.0 Bacilli alaA GO:0003674,GO:0003824,GO:0004021,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006082,GO:0006090,GO:0006520,GO:0006522,GO:0006523,GO:0006807,GO:0006950,GO:0006974,GO:0008144,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009058,GO:0009078,GO:0009079,GO:0009987,GO:0016020,GO:0016053,GO:0016740,GO:0016769,GO:0019272,GO:0019752,GO:0019842,GO:0030170,GO:0030632,GO:0032787,GO:0033554,GO:0036094,GO:0040007,GO:0042221,GO:0042851,GO:0042852,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044464,GO:0046144,GO:0046145,GO:0046394,GO:0046416,GO:0046436,GO:0046437,GO:0046677,GO:0047635,GO:0048037,GO:0050662,GO:0050896,GO:0051716,GO:0070279,GO:0071704,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.6.1.2,2.6.1.66 ko:K00814,ko:K14260 ko00220,ko00250,ko00290,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00220,map00250,map00290,map00710,map01100,map01110,map01120,map01130,map01200,map01210,map01230 M00171 R00258,R01215 RC00006,RC00008,RC00036 ko00000,ko00001,ko00002,ko01000,ko01007 iNJ661.Rv0337c Bacteria 1TP0J@1239,4HD83@91061,COG0436@1,COG0436@2 NA|NA|NA E Aminotransferase IIAPBPCI_02259 264199.stu1637 6.9e-75 286.6 Bacilli XK27_03180 ko:K03499,ko:K06149 ko00000,ko02000 2.A.38.1,2.A.38.4 Bacteria 1V3NY@1239,4HIP3@91061,COG0589@1,COG0589@2 NA|NA|NA T universal stress protein IIAPBPCI_02261 1046629.Ssal_00399 2.7e-151 541.2 Bacilli pflA GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0018307,GO:0019538,GO:0033554,GO:0036211,GO:0043170,GO:0043364,GO:0043365,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0050896,GO:0051536,GO:0051539,GO:0051540,GO:0051716,GO:0055114,GO:0070283,GO:0071704,GO:1901564 1.97.1.4 ko:K04069 R04710 ko00000,ko01000 iECOK1_1307.ECOK1_0925,iEcE24377_1341.EcE24377A_0980,iEcSMS35_1347.EcSMS35_2219,iYL1228.KPN_00930 Bacteria 1TPK2@1239,4HACV@91061,COG1180@1,COG1180@2 NA|NA|NA C Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine IIAPBPCI_02262 264199.stu1641 7.6e-239 832.8 Bacilli hlyX ko:K03699 ko00000,ko02042 Bacteria 1TPN0@1239,4H9SB@91061,COG1253@1,COG1253@2 NA|NA|NA S COG1253 Hemolysins and related proteins containing CBS domains IIAPBPCI_02263 264199.stu1642 3.9e-142 510.8 Bacilli modF GO:0000166,GO:0003674,GO:0005488,GO:0005524,GO:0008144,GO:0017076,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0097159,GO:0097367,GO:1901265,GO:1901363 3.6.3.21,3.6.3.34 ko:K02013,ko:K02028,ko:K05776 ko02010,map02010 M00189,M00236,M00240 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.14,3.A.1.3 Bacteria 1TRR4@1239,4HB4U@91061,COG1119@1,COG1119@2 NA|NA|NA P abc transporter atp-binding protein IIAPBPCI_02264 264199.stu1643 0.0 1248.8 Bacilli yjcE GO:0003674,GO:0005215,GO:0005451,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0006814,GO:0006873,GO:0006885,GO:0008150,GO:0008324,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015079,GO:0015081,GO:0015291,GO:0015297,GO:0015298,GO:0015299,GO:0015318,GO:0015385,GO:0015386,GO:0015491,GO:0015672,GO:0016020,GO:0019725,GO:0022804,GO:0022821,GO:0022857,GO:0022890,GO:0030001,GO:0030003,GO:0030004,GO:0030641,GO:0034220,GO:0035725,GO:0042592,GO:0044464,GO:0046873,GO:0048878,GO:0050801,GO:0051179,GO:0051234,GO:0051453,GO:0055067,GO:0055080,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071804,GO:0071805,GO:0071944,GO:0098655,GO:0098657,GO:0098659,GO:0098660,GO:0098662,GO:0098719,GO:0098739,GO:0098771,GO:0099516,GO:0099587,GO:1902600 ko:K03316 ko00000 2.A.36 Bacteria 1TR4G@1239,4HBJR@91061,COG0025@1,COG0025@2 NA|NA|NA P NhaP-type Na H and K H antiporters IIAPBPCI_02266 264199.stu1645 2e-97 361.7 Bacilli ytqB 2.1.1.176 ko:K03500 ko00000,ko01000,ko03009 Bacteria 1UHQD@1239,4HIMC@91061,COG0144@1,COG0144@2 NA|NA|NA J (SAM)-dependent IIAPBPCI_02267 264199.stu1646 3.3e-180 637.5 Bacilli yhcC GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464,GO:0048037,GO:0051536,GO:0051539,GO:0051540 ko:K07139 ko00000 Bacteria 1TQ57@1239,4H9N8@91061,COG1242@1,COG1242@2 NA|NA|NA S radical SAM protein IIAPBPCI_02268 264199.stu1647 7.8e-194 682.9 Bacilli ylbL ko:K07177 ko02024,map02024 ko00000,ko00001,ko01002 Bacteria 1TRUF@1239,4HBAY@91061,COG3480@1,COG3480@2 NA|NA|NA T Belongs to the peptidase S16 family IIAPBPCI_02269 264199.stu1648 1.7e-87 328.6 Bacilli coaD 2.7.7.3 ko:K00954 ko00770,ko01100,map00770,map01100 M00120 R03035 RC00002 ko00000,ko00001,ko00002,ko01000 Bacteria 1V3MR@1239,4HH47@91061,COG0669@1,COG0669@2 NA|NA|NA H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate IIAPBPCI_02270 264199.stu1649 4.3e-92 344.0 Bacilli rsmD 2.1.1.171 ko:K08316 R07234 RC00003 ko00000,ko01000,ko03009 Bacteria 1V3JF@1239,4HGXT@91061,COG0742@1,COG0742@2 NA|NA|NA L Methyltransferase IIAPBPCI_02271 264199.stu1650 5.5e-172 610.1 Bacilli trxB 1.8.1.9 ko:K00384 ko00450,map00450 R02016,R03596,R09372 RC00013,RC02518,RC02873 ko00000,ko00001,ko01000 Bacteria 1TNZS@1239,4HA4N@91061,COG0492@1,COG0492@2 NA|NA|NA C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family IIAPBPCI_02272 40041.SZO_03890 1.1e-09 68.9 Streptococcus dysgalactiae group Bacteria 1M9T3@119603,1TXCH@1239,29I01@1,304X3@2,4I6AC@91061 NA|NA|NA S Protein of unknown function (DUF4059) IIAPBPCI_02273 322159.STER_1617 1.3e-131 475.7 Bacilli tcyN 3.6.3.21 ko:K02028,ko:K10010,ko:K16960,ko:K16963 ko02010,map02010 M00234,M00236,M00585,M00586 ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.3,3.A.1.3.10,3.A.1.3.13,3.A.1.3.14 Bacteria 1TNYD@1239,4H9WY@91061,COG1126@1,COG1126@2 NA|NA|NA E abc transporter atp-binding protein IIAPBPCI_02274 264199.stu1653 2.3e-162 578.2 Bacilli yxeN ko:K02029,ko:K16959,ko:K16962 ko02010,map02010 M00236,M00585,M00586 ko00000,ko00001,ko00002,ko02000 3.A.1.3,3.A.1.3.13 Bacteria 1UZ2C@1239,4HF77@91061,COG0765@1,COG0765@2 NA|NA|NA P ABC transporter (Permease IIAPBPCI_02275 264199.stu1654 4.8e-151 540.4 Bacilli yxeM ko:K02030 M00236 ko00000,ko00002,ko02000 3.A.1.3 Bacteria 1V7WQ@1239,4HK1Z@91061,COG0834@1,COG0834@2 NA|NA|NA ET ABC-type amino acid transport signal transduction systems, periplasmic component domain IIAPBPCI_02277 322159.STER_1621 8.8e-201 706.1 Bacilli dinB GO:0000731,GO:0003674,GO:0003824,GO:0003887,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0006139,GO:0006259,GO:0006260,GO:0006281,GO:0006301,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0016604,GO:0016607,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019985,GO:0031668,GO:0031974,GO:0031981,GO:0032991,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0035770,GO:0036464,GO:0042276,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0070013,GO:0071496,GO:0071704,GO:0071897,GO:0090304,GO:0140097,GO:1901360,GO:1901362,GO:1901576,GO:1990904 2.7.7.7 ko:K02346 ko00000,ko01000,ko03400 Bacteria 1TP42@1239,4HADJ@91061,COG0389@1,COG0389@2 NA|NA|NA L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII IIAPBPCI_02278 264199.stu1657 0.0 1551.2 Bacilli pflB 2.3.1.54 ko:K00656 ko00620,ko00640,ko00650,ko01100,ko01120,map00620,map00640,map00650,map01100,map01120 R00212,R06987 RC00004,RC01181,RC02742,RC02833 ko00000,ko00001,ko01000 Bacteria 1TPTF@1239,4H9RD@91061,COG1882@1,COG1882@2 NA|NA|NA C formate acetyltransferase' IIAPBPCI_02279 322159.STER_1623 7.2e-43 179.5 Bacilli cah 4.2.1.1 ko:K01674 ko00910,map00910 R00132,R10092 RC02807 ko00000,ko00001,ko01000 Bacteria 1V16J@1239,4HA62@91061,COG3338@1,COG3338@2 NA|NA|NA P carbonic anhydrase IIAPBPCI_02280 264199.stu1658 5.8e-39 166.4 Bacilli cah 4.2.1.1 ko:K01674 ko00910,map00910 R00132,R10092 RC02807 ko00000,ko00001,ko01000 Bacteria 1V16J@1239,4HA62@91061,COG3338@1,COG3338@2 NA|NA|NA P carbonic anhydrase IIAPBPCI_02281 322159.STER_1624 1e-84 319.3 Bacilli yjcF ko:K02348 ko00000 Bacteria 1VA2J@1239,4HKF5@91061,COG2153@1,COG2153@2 NA|NA|NA S COG0454 Histone acetyltransferase HPA2 and related acetyltransferases IIAPBPCI_02282 264199.stu1660 1.6e-09 68.2 Bacteria hsdS_1 3.1.21.3 ko:K01154 ko00000,ko01000,ko02048 Bacteria COG0732@1,COG0732@2 NA|NA|NA V type I restriction modification DNA specificity domain IIAPBPCI_02283 264199.stu1661 3.9e-42 177.2 Bacilli ko:K02004 M00258 ko00000,ko00002,ko02000 3.A.1 Bacteria 1V5Y6@1239,4HHGT@91061,COG1196@1,COG1196@2 NA|NA|NA D nuclear chromosome segregation IIAPBPCI_02284 264199.stu1662 1e-31 142.1 Bacilli ko:K02004 M00258 ko00000,ko00002,ko02000 3.A.1 Bacteria 1V5Y6@1239,4HHGT@91061,COG1196@1,COG1196@2 NA|NA|NA D nuclear chromosome segregation IIAPBPCI_02285 264199.stu1663 1.2e-32 145.2 Bacteria ko:K04763 ko00000,ko03036 Bacteria COG0582@1,COG0582@2 NA|NA|NA L DNA integration IIAPBPCI_02286 203120.LEUM_A08 4.8e-58 230.3 Leuconostocaceae ko:K04763 ko00000,ko03036 Bacteria 1VEIE@1239,4AX2E@81850,4HK3N@91061,COG0582@1,COG0582@2 NA|NA|NA L Phage integrase family IIAPBPCI_02287 264199.stu1664 7.6e-118 429.9 Bacteria XK27_05540 Bacteria COG1434@1,COG1434@2 NA|NA|NA S Gram-negative-bacterium-type cell wall biogenesis IIAPBPCI_02288 264199.stu1665 9.9e-79 299.7 Bacilli ybbM GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006873,GO:0006875,GO:0006879,GO:0008150,GO:0009987,GO:0015075,GO:0016020,GO:0016021,GO:0019725,GO:0022857,GO:0030003,GO:0031224,GO:0031226,GO:0034220,GO:0042592,GO:0044425,GO:0044459,GO:0044464,GO:0046916,GO:0048878,GO:0050801,GO:0051179,GO:0051234,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071944,GO:0098771 ko:K02069 M00211 ko00000,ko00002,ko02000 9.B.25.1 Bacteria 1UY1N@1239,4HDM4@91061,COG0390@1,COG0390@2 NA|NA|NA S transport system, permease component IIAPBPCI_02289 322159.STER_1628 3e-116 424.5 Bacilli ybbL GO:0005575,GO:0005623,GO:0005886,GO:0006873,GO:0006875,GO:0006879,GO:0008150,GO:0009987,GO:0016020,GO:0019725,GO:0030003,GO:0042592,GO:0044464,GO:0046916,GO:0048878,GO:0050801,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0065007,GO:0065008,GO:0071944,GO:0098771 ko:K02065,ko:K02068 ko02010,map02010 M00210,M00211,M00669,M00670 ko00000,ko00001,ko00002,ko02000 3.A.1.27 Bacteria 1V3DQ@1239,4HHGU@91061,COG4619@1,COG4619@2 NA|NA|NA S abc transporter atp-binding protein IIAPBPCI_02290 762051.LKI_10701 3.1e-31 140.6 Leuconostocaceae Bacteria 1VZDZ@1239,2DY5Q@1,34896@2,4AY9W@81850,4HZ9A@91061 NA|NA|NA IIAPBPCI_02291 264199.stu1667 3.8e-184 650.6 Bacilli ampC Bacteria 1TNZX@1239,4IPJT@91061,COG1680@1,COG1680@2 NA|NA|NA V COG1680 Beta-lactamase class C and other penicillin binding proteins IIAPBPCI_02292 322159.STER_1630 2.8e-137 494.6 Bacilli cppA Bacteria 1VMPM@1239,4HSVM@91061,COG0346@1,COG0346@2 NA|NA|NA E CppA N-terminal IIAPBPCI_02293 322159.STER_0151 4.8e-108 397.1 Firmicutes ko:K07485 ko00000 Bacteria 1TQ93@1239,COG3464@1,COG3464@2 NA|NA|NA L Transposase IIAPBPCI_02294 322159.STER_0138 9.8e-112 409.5 Bacilli ko:K07485 ko00000 Bacteria 1TQ93@1239,4IR2T@91061,COG3464@1,COG3464@2 NA|NA|NA L Helix-turn-helix domain of transposase family ISL3 IIAPBPCI_02295 1008453.HMPREF9957_1401 5.1e-21 107.1 Streptococcus mitis ko:K07497 ko00000 Bacteria 1TRR6@1239,2TP00@28037,4HAJS@91061,COG2801@1,COG2801@2 NA|NA|NA L overlaps another CDS with the same product name IIAPBPCI_02296 1423734.JCM14202_2269 1.7e-44 186.8 Bacilli Bacteria 1UZT5@1239,4IPKX@91061,COG0640@1,COG0640@2 NA|NA|NA K helix_turn_helix, Arsenical Resistance Operon Repressor IIAPBPCI_02297 904306.HMPREF9192_0991 6.3e-160 570.1 Bacilli yrdR Bacteria 1UZGC@1239,4HDET@91061,COG0697@1,COG0697@2 NA|NA|NA EG COG0697 Permeases of the drug metabolite transporter (DMT) superfamily IIAPBPCI_02298 575606.HMPREF0525_01168 1.2e-71 276.6 Lactobacillaceae 2.7.7.12 ko:K00965 ko00052,ko00520,ko01100,ko04917,map00052,map00520,map01100,map04917 M00362,M00554,M00632 R00955 RC00002 ko00000,ko00001,ko00002,ko01000 Bacteria 1TSNU@1239,3F3JH@33958,4H9TY@91061,COG1085@1,COG1085@2 NA|NA|NA C Domain of unknown function (DUF4931) IIAPBPCI_02299 904306.HMPREF9192_0989 6.8e-153 546.6 Firmicutes Bacteria 1UKB6@1239,COG1735@1,COG1735@2 NA|NA|NA S metal-dependent hydrolase with the TIM-barrel fold IIAPBPCI_02300 904306.HMPREF9192_0988 7.7e-123 446.4 Bacilli dlpA Bacteria 1V1ME@1239,4HGQE@91061,COG0684@1,COG0684@2 NA|NA|NA H Methyltransferase IIAPBPCI_02301 904306.HMPREF9192_0987 4e-209 733.8 Bacilli dlpA 1.1.1.85 ko:K00052 ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230 M00432,M00535 R00994,R04426,R10052 RC00084,RC00417,RC03036 br01601,ko00000,ko00001,ko00002,ko01000 Bacteria 1TPEM@1239,4HA76@91061,COG0473@1,COG0473@2 NA|NA|NA CE Tartrate dehydrogenase IIAPBPCI_02303 904306.HMPREF9192_0984 1.3e-160 572.4 Bacilli 4.1.3.39 ko:K01666 ko00360,ko00362,ko00621,ko00622,ko01100,ko01120,ko01220,map00360,map00362,map00621,map00622,map01100,map01120,map01220 M00545,M00569 R00750 RC00307,RC00371 br01602,ko00000,ko00001,ko00002,ko01000 Bacteria 1TS0A@1239,4HAXZ@91061,COG0119@1,COG0119@2 NA|NA|NA E Catalyzes the retro-aldol cleavage of 4-hydroxy-2- oxopentanoate to pyruvate and acetaldehyde. Is involved in the meta-cleavage pathway for the degradation of aromatic compounds # 2051 queries scanned # Total time (seconds): 4.93483018875 # Rate: 415.62 q/s