Select genomic region:
Overview
24.1
24.2
79.1
111.1

### Identified secondary metabolite regions using strictness 'relaxed'

WMBS01000001.1

Region | Type | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | ---
Region 24.1 | betalactone | 1 | 27,985 | fengycin | NRP | 40%
Region 24.2 | RiPP-like | 194,346 | 204,684 | amylocyclicin | RiPP:Head-to-tailcyclized peptide | 50%

WMBS01000006.1

Region | Type | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | ---
Region 79.1 | RiPP-like | 78,141 | 88,368 |

WMBS01000099.1

Region | Type | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | ---
Region 111.1 | T3PKS | 1 | 1,783 |

Region | Type | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | ---
Region 24.1 | betalactone | 1 | 27,985 | fengycin | NRP | 40%
Region 24.2 | RiPP-like | 194,346 | 204,684 | amylocyclicin | RiPP:Head-to-tailcyclized peptide | 50%
Region 79.1 | RiPP-like | 78,141 | 88,368 |
Region 111.1 | T3PKS | 1 | 1,783 |

No secondary metabolite regions were found in these records:
  WMBS01000101.1
  WMBS01000102.1
  WMBS01000103.1
  WMBS01000104.1
  WMBS01000105.1
  WMBS01000106.1
  WMBS01000107.1
  WMBS01000108.1
  WMBS01000109.1
  WMBS01000110.1
  WMBS01000010.1
  WMBS01000111.1
  WMBS01000112.1
  WMBS01000113.1
  WMBS01000011.1
  WMBS01000012.1
  WMBS01000013.1
  WMBS01000014.1
  WMBS01000015.1
  WMBS01000016.1
  WMBS01000017.1
  WMBS01000018.1
  WMBS01000019.1
  WMBS01000020.1
  WMBS01000021.1
  WMBS01000022.1
  WMBS01000023.1
  WMBS01000024.1
  WMBS01000025.1
  WMBS01000026.1
  WMBS01000027.1
  WMBS01000028.1
  WMBS01000029.1
  WMBS01000002.1
  WMBS01000030.1
  WMBS01000031.1
  WMBS01000032.1
  WMBS01000033.1
  WMBS01000034.1
  WMBS01000035.1
  WMBS01000036.1
  WMBS01000037.1
  WMBS01000038.1
  WMBS01000039.1
  WMBS01000003.1
  WMBS01000040.1
  WMBS01000041.1
  WMBS01000042.1
  WMBS01000043.1
  WMBS01000044.1
  WMBS01000045.1
  WMBS01000046.1
  WMBS01000047.1
  WMBS01000048.1
  WMBS01000049.1
  WMBS01000004.1
  WMBS01000050.1
  WMBS01000051.1
  WMBS01000052.1
  WMBS01000053.1
  WMBS01000054.1
  WMBS01000055.1
  WMBS01000056.1
  WMBS01000057.1
  WMBS01000058.1
  WMBS01000059.1
  WMBS01000005.1
  WMBS01000060.1
  WMBS01000061.1
  WMBS01000062.1
  WMBS01000063.1
  WMBS01000064.1
  WMBS01000065.1
  WMBS01000066.1
  WMBS01000067.1
  WMBS01000068.1
  WMBS01000069.1
  WMBS01000070.1
  WMBS01000071.1
  WMBS01000072.1
  WMBS01000073.1
  WMBS01000074.1
  WMBS01000075.1
  WMBS01000076.1
  WMBS01000077.1
  WMBS01000078.1
  WMBS01000079.1
  WMBS01000080.1
  WMBS01000007.1
  WMBS01000081.1
  WMBS01000082.1
  WMBS01000083.1
  WMBS01000084.1
  WMBS01000085.1
  WMBS01000086.1
  WMBS01000087.1
  WMBS01000088.1
  WMBS01000089.1
  WMBS01000090.1
  WMBS01000008.1
  WMBS01000091.1
  WMBS01000092.1
  WMBS01000093.1
  WMBS01000094.1
  WMBS01000095.1
  WMBS01000096.1
  WMBS01000097.1
  WMBS01000098.1
  WMBS01000100.1
  WMBS01000009.1

Compact view
WMBS01000001.1 - Region 1 - betalactone
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 1 - 27,985 nt. (total: 27,985 nt) Show pHMM detection rules used
Region on contig edge.
betalactone: (HMGL-like and AMP-binding)

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
KnownClusterBlast
Similar known gene clusters
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.
WMBS01000001.1 - Region 2 - RiPP-like
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 194,346 - 204,684 nt. (total: 10,339 nt) Show pHMM detection rules used
RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
KnownClusterBlast
Similar known gene clusters
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.
WMBS01000006.1 - Region 1 - RiPP-like
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 78,141 - 88,368 nt. (total: 10,228 nt) Show pHMM detection rules used
RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
KnownClusterBlast
Similar known gene clusters
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.

No matches found.

WMBS01000099.1 - Region 1 - T3PKS
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 1 - 1,783 nt. (total: 1,783 nt) Show pHMM detection rules used
Region on contig edge.
T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
KnownClusterBlast
Similar known gene clusters
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.

No matches found.