GCA_011029085.1 - 2 region(s)

Identified primary metabolite regions

JAAJBE010000003 (original name was: JAAJBE010000003.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 32.1	Oxidative_glycerol	Other	95,892	120,108

JAAJBE010000005 (original name was: JAAJBE010000005.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 34.1	TPP_AA_metabolism	Putative	48,080	78,347

Region	Type	Class	From	To	Most similar known cluster	Similarity
Region 32.1	Oxidative_glycerol	Other	95,892	120,108
Region 34.1	TPP_AA_metabolism	Putative	48,080	78,347

No primary metabolite regions were found in these records:: JAAJBE010000010 (original name was: JAAJBE010000010.1); JAAJBE010000011 (original name was: JAAJBE010000011.1); JAAJBE010000012 (original name was: JAAJBE010000012.1); JAAJBE010000013 (original name was: JAAJBE010000013.1); JAAJBE010000014 (original name was: JAAJBE010000014.1); JAAJBE010000015 (original name was: JAAJBE010000015.1); JAAJBE010000016 (original name was: JAAJBE010000016.1); JAAJBE010000017 (original name was: JAAJBE010000017.1); JAAJBE010000018 (original name was: JAAJBE010000018.1); JAAJBE010000019 (original name was: JAAJBE010000019.1); JAAJBE010000001 (original name was: JAAJBE010000001.1); JAAJBE010000020 (original name was: JAAJBE010000020.1); JAAJBE010000021 (original name was: JAAJBE010000021.1); JAAJBE010000022 (original name was: JAAJBE010000022.1); JAAJBE010000023 (original name was: JAAJBE010000023.1); JAAJBE010000024 (original name was: JAAJBE010000024.1); JAAJBE010000025 (original name was: JAAJBE010000025.1); JAAJBE010000026 (original name was: JAAJBE010000026.1); JAAJBE010000027 (original name was: JAAJBE010000027.1); JAAJBE010000028 (original name was: JAAJBE010000028.1); JAAJBE010000029 (original name was: JAAJBE010000029.1); JAAJBE010000002 (original name was: JAAJBE010000002.1); JAAJBE010000030 (original name was: JAAJBE010000030.1); JAAJBE010000031 (original name was: JAAJBE010000031.1); JAAJBE010000032 (original name was: JAAJBE010000032.1); JAAJBE010000033 (original name was: JAAJBE010000033.1); JAAJBE010000034 (original name was: JAAJBE010000034.1); JAAJBE010000035 (original name was: JAAJBE010000035.1); JAAJBE010000036 (original name was: JAAJBE010000036.1); JAAJBE010000037 (original name was: JAAJBE010000037.1); JAAJBE010000038 (original name was: JAAJBE010000038.1); JAAJBE010000004 (original name was: JAAJBE010000004.1); JAAJBE010000006 (original name was: JAAJBE010000006.1); JAAJBE010000007 (original name was: JAAJBE010000007.1); JAAJBE010000008 (original name was: JAAJBE010000008.1); JAAJBE010000009 (original name was: JAAJBE010000009.1)

Compact view

c00032_JAAJBE0.. - Region 1 - Oxidative_glycerol

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Location: 95,892 - 120,108 nt. (total: 24,217 nt) Show pHMM detection rules used

Oxidative_glycerol: ((Fe-ADH or Fe-ADH_2) and Dak1 and Dak2)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

c00034_JAAJBE0.. - Region 1 - TPP_AA_metabolism

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Location: 48,080 - 78,347 nt. (total: 30,268 nt) Show pHMM detection rules used

TPP_AA_metabolism: (TPP_enzyme_C and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or Gly_8-9_TMA or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and minimum(2, [ALS_ss_C, AlaDh_PNT_C, Arginase, BKACE, BcrAD_BadFG, Beta_elim_lyase, CPSase_L_D2, Cys_Met_Meta_PP, ELFV_dehydrog, GRDB, Glu_syn_central, Glu_synthase, Gly_reductase, HAAA1, HG2B1, HG2B2, HGD-D, HleuD1, HleuD2, HleuS1, HleuS2, Homoserine_dh, ILVD_EDD, IlvC, Lactoyl-CoA1, Lactoyl-CoA2, Lyase_aromatic, MAAL_C, OKR_DC_1_5_lysine, OKR_DC_1_5_ornithine, OKR_DC_1_7_arginine, OKR_DC_1_C, OTCace, PALP, Proline_reductase, Sacchrp_dh_C, TPL, Thr_dehydrat_C, TnaA, Urocanase]) and not (POR or POR_N or PFOR_II))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.