GCA_011029235.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

JAAJBN010000012 (original name was: JAAJBN010000012.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 3.1	RiPP-like	4,231	14,646	salivaricin CRL1328 α peptide / salivaricin CRL1328 β peptide	RiPP	58%
Region 3.2	lanthipeptide-class-i	27,539	53,505	nisin Q	RiPP:Lanthipeptide	63%

JAAJBN010000003 (original name was: JAAJBN010000003.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 33.1	T3PKS	65,475	106,638

No secondary metabolite regions were found in these records:: JAAJBN010000010 (original name was: JAAJBN010000010.1); JAAJBN010000011 (original name was: JAAJBN010000011.1); JAAJBN010000013 (original name was: JAAJBN010000013.1); JAAJBN010000014 (original name was: JAAJBN010000014.1); JAAJBN010000015 (original name was: JAAJBN010000015.1); JAAJBN010000016 (original name was: JAAJBN010000016.1); JAAJBN010000017 (original name was: JAAJBN010000017.1); JAAJBN010000018 (original name was: JAAJBN010000018.1); JAAJBN010000019 (original name was: JAAJBN010000019.1); JAAJBN010000001 (original name was: JAAJBN010000001.1); JAAJBN010000020 (original name was: JAAJBN010000020.1); JAAJBN010000021 (original name was: JAAJBN010000021.1); JAAJBN010000022 (original name was: JAAJBN010000022.1); JAAJBN010000023 (original name was: JAAJBN010000023.1); JAAJBN010000024 (original name was: JAAJBN010000024.1); JAAJBN010000025 (original name was: JAAJBN010000025.1); JAAJBN010000026 (original name was: JAAJBN010000026.1); JAAJBN010000027 (original name was: JAAJBN010000027.1); JAAJBN010000028 (original name was: JAAJBN010000028.1); JAAJBN010000029 (original name was: JAAJBN010000029.1); JAAJBN010000002 (original name was: JAAJBN010000002.1); JAAJBN010000030 (original name was: JAAJBN010000030.1); JAAJBN010000031 (original name was: JAAJBN010000031.1); JAAJBN010000032 (original name was: JAAJBN010000032.1); JAAJBN010000033 (original name was: JAAJBN010000033.1); JAAJBN010000034 (original name was: JAAJBN010000034.1); JAAJBN010000035 (original name was: JAAJBN010000035.1); JAAJBN010000036 (original name was: JAAJBN010000036.1); JAAJBN010000037 (original name was: JAAJBN010000037.1); JAAJBN010000038 (original name was: JAAJBN010000038.1); JAAJBN010000039 (original name was: JAAJBN010000039.1); JAAJBN010000040 (original name was: JAAJBN010000040.1); JAAJBN010000041 (original name was: JAAJBN010000041.1); JAAJBN010000042 (original name was: JAAJBN010000042.1); JAAJBN010000043 (original name was: JAAJBN010000043.1); JAAJBN010000004 (original name was: JAAJBN010000004.1); JAAJBN010000005 (original name was: JAAJBN010000005.1); JAAJBN010000006 (original name was: JAAJBN010000006.1); JAAJBN010000007 (original name was: JAAJBN010000007.1); JAAJBN010000008 (original name was: JAAJBN010000008.1); JAAJBN010000009 (original name was: JAAJBN010000009.1)

Compact view

c00003_JAAJBN0.. - Region 1 - RiPP-like

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Location: 4,231 - 14,646 nt. (total: 10,416 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

c00003_JAAJBN0.. - Region 2 - lanthipeptide-class-i

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Location: 27,539 - 53,505 nt. (total: 25,967 nt) Show pHMM detection rules used

lanthipeptide-class-i: ((LANC_like and (Lant_dehydr_N or Lant_dehydr_C)) and not (YcaO or TIGR03882))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Lanthipeptides

KnownClusterBlast

Lanthipeptide predictions

Lanthipeptide(s) for ctg3_44 - Putative Class I

ctg3_43 leader / core peptide: MSVNDFKLDLVKVSKESTNSNYSVK - IDhbDhaYDhaLCDhbPGCKDhbGALMGCDhbMKDhbADhaCGCHVHIDhaK

Legend:

Dha: Didehydroalanine
Dhb: Didehydrobutyrine

Similar known gene clusters

Lanthipeptides

Core peptide predictions

ctg3_43 - Class I

Cleavage pHMM score: 12.40

RODEO score: 26

Monoisotopic mass: 3326.6 Da

Molecular weight: 3329.0 Da

Number of bridges: 5

Alternative weights: (assuming N unmodified Ser/Thr residues); 3347.0 Da N = 1; 3365.0 Da N = 2; 3383.0 Da N = 3; 3401.1 Da N = 4

c00033_JAAJBN0.. - Region 1 - T3PKS

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Location: 65,475 - 106,638 nt. (total: 41,164 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.