GCA_012689225.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

WKFD01000015.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 20.1	RiPP-like	1	6,541

WKFD01000036.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 43.1	terpene	1	12,348

WKFD01000064.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 74.1	cyclic-lactone-autoinducer	1	8,090

WKFD01000073.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 84.1	RiPP-like	1	5,642	coagulin	RiPP	80%

Region	Type	From	To	Most similar known cluster	Similarity
Region 20.1	RiPP-like	1	6,541
Region 43.1	terpene	1	12,348
Region 74.1	cyclic-lactone-autoinducer	1	8,090
Region 84.1	RiPP-like	1	5,642	coagulin	RiPP	80%

No secondary metabolite regions were found in these records:: WKFD01000001.1; WKFD01000010.1; WKFD01000100.1; WKFD01000101.1; WKFD01000102.1; WKFD01000103.1; WKFD01000104.1; WKFD01000105.1; WKFD01000106.1; WKFD01000107.1; WKFD01000108.1; WKFD01000109.1; WKFD01000011.1; WKFD01000110.1; WKFD01000111.1; WKFD01000112.1; WKFD01000012.1; WKFD01000013.1; WKFD01000014.1; WKFD01000016.1; WKFD01000017.1; WKFD01000018.1; WKFD01000019.1; WKFD01000002.1; WKFD01000020.1; WKFD01000021.1; WKFD01000022.1; WKFD01000023.1; WKFD01000024.1; WKFD01000025.1; WKFD01000026.1; WKFD01000027.1; WKFD01000028.1; WKFD01000029.1; WKFD01000003.1; WKFD01000030.1; WKFD01000031.1; WKFD01000032.1; WKFD01000033.1; WKFD01000034.1; WKFD01000035.1; WKFD01000037.1; WKFD01000038.1; WKFD01000039.1; WKFD01000004.1; WKFD01000040.1; WKFD01000041.1; WKFD01000042.1; WKFD01000043.1; WKFD01000044.1; WKFD01000045.1; WKFD01000046.1; WKFD01000047.1; WKFD01000048.1; WKFD01000049.1; WKFD01000005.1; WKFD01000050.1; WKFD01000051.1; WKFD01000052.1; WKFD01000053.1; WKFD01000054.1; WKFD01000055.1; WKFD01000056.1; WKFD01000057.1; WKFD01000058.1; WKFD01000059.1; WKFD01000006.1; WKFD01000060.1; WKFD01000061.1; WKFD01000062.1; WKFD01000063.1; WKFD01000065.1; WKFD01000066.1; WKFD01000067.1; WKFD01000068.1; WKFD01000069.1; WKFD01000007.1; WKFD01000070.1; WKFD01000071.1; WKFD01000072.1; WKFD01000074.1; WKFD01000075.1; WKFD01000076.1; WKFD01000077.1; WKFD01000078.1; WKFD01000079.1; WKFD01000008.1; WKFD01000080.1; WKFD01000081.1; WKFD01000082.1; WKFD01000083.1; WKFD01000084.1; WKFD01000085.1; WKFD01000086.1; WKFD01000087.1; WKFD01000088.1; WKFD01000089.1; WKFD01000009.1; WKFD01000090.1; WKFD01000091.1; WKFD01000092.1; WKFD01000093.1; WKFD01000094.1; WKFD01000095.1; WKFD01000096.1; WKFD01000097.1; WKFD01000098.1; WKFD01000099.1

Compact view

WKFD01000015.1 - Region 1 - RiPP-like

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Location: 1 - 6,541 nt. (total: 6,541 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

WKFD01000036.1 - Region 1 - terpene

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Location: 1 - 12,348 nt. (total: 12,348 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.

WKFD01000064.1 - Region 1 - cyclic-lactone-autoinducer

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Location: 1 - 8,090 nt. (total: 8,090 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.

WKFD01000073.1 - Region 1 - RiPP-like

Download region GenBank file

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Location: 1 - 5,642 nt. (total: 5,642 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters