Select genomic region:
Overview
58.1
73.1

### Identified primary metabolite regions

WCHH01000002.1

Region | Type | Class | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | --- | ---
Region 58.1 | gallic_acid_met | Aromatic | 13,841 | 35,840 | Gallic acid metabolism K. michiganensis | GALL | 100%

WCHH01000033.1

Region | Type | Class | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | --- | ---
Region 73.1 | Arginine2_Hcarbonate | Other | 3,507 | 20,185 |

Region | Type | Class | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | --- | ---
Region 58.1 | gallic_acid_met | Aromatic | 13,841 | 35,840 | Gallic acid metabolism K. michiganensis | GALL | 100%
Region 73.1 | Arginine2_Hcarbonate | Other | 3,507 | 20,185 |

No primary metabolite regions were found in these records:
  WCHH01000001.1
  WCHH01000010.1
  WCHH01000100.1
  WCHH01000101.1
  WCHH01000102.1
  WCHH01000103.1
  WCHH01000104.1
  WCHH01000105.1
  WCHH01000106.1
  WCHH01000107.1
  WCHH01000108.1
  WCHH01000109.1
  WCHH01000011.1
  WCHH01000110.1
  WCHH01000111.1
  WCHH01000112.1
  WCHH01000113.1
  WCHH01000114.1
  WCHH01000115.1
  WCHH01000116.1
  WCHH01000117.1
  WCHH01000118.1
  WCHH01000119.1
  WCHH01000012.1
  WCHH01000120.1
  WCHH01000121.1
  WCHH01000122.1
  WCHH01000123.1
  WCHH01000124.1
  WCHH01000125.1
  WCHH01000126.1
  WCHH01000127.1
  WCHH01000128.1
  WCHH01000129.1
  WCHH01000013.1
  WCHH01000130.1
  WCHH01000131.1
  WCHH01000132.1
  WCHH01000133.1
  WCHH01000134.1
  WCHH01000135.1
  WCHH01000136.1
  WCHH01000137.1
  WCHH01000138.1
  WCHH01000139.1
  WCHH01000014.1
  WCHH01000140.1
  WCHH01000141.1
  WCHH01000142.1
  WCHH01000143.1
  WCHH01000144.1
  WCHH01000145.1
  WCHH01000015.1
  WCHH01000016.1
  WCHH01000017.1
  WCHH01000018.1
  WCHH01000019.1
  WCHH01000020.1
  WCHH01000021.1
  WCHH01000022.1
  WCHH01000023.1
  WCHH01000024.1
  WCHH01000025.1
  WCHH01000026.1
  WCHH01000027.1
  WCHH01000028.1
  WCHH01000029.1
  WCHH01000003.1
  WCHH01000030.1
  WCHH01000031.1
  WCHH01000032.1
  WCHH01000034.1
  WCHH01000035.1
  WCHH01000036.1
  WCHH01000037.1
  WCHH01000038.1
  WCHH01000039.1
  WCHH01000004.1
  WCHH01000040.1
  WCHH01000041.1
  WCHH01000042.1
  WCHH01000043.1
  WCHH01000044.1
  WCHH01000045.1
  WCHH01000046.1
  WCHH01000047.1
  WCHH01000048.1
  WCHH01000049.1
  WCHH01000005.1
  WCHH01000050.1
  WCHH01000051.1
  WCHH01000052.1
  WCHH01000053.1
  WCHH01000054.1
  WCHH01000055.1
  WCHH01000056.1
  WCHH01000057.1
  WCHH01000058.1
  WCHH01000059.1
  WCHH01000006.1
  WCHH01000060.1
  WCHH01000061.1
  WCHH01000062.1
  WCHH01000063.1
  WCHH01000064.1
  WCHH01000065.1
  WCHH01000066.1
  WCHH01000067.1
  WCHH01000068.1
  WCHH01000069.1
  WCHH01000007.1
  WCHH01000070.1
  WCHH01000071.1
  WCHH01000072.1
  WCHH01000073.1
  WCHH01000074.1
  WCHH01000075.1
  WCHH01000076.1
  WCHH01000077.1
  WCHH01000078.1
  WCHH01000079.1
  WCHH01000008.1
  WCHH01000080.1
  WCHH01000081.1
  WCHH01000082.1
  WCHH01000083.1
  WCHH01000084.1
  WCHH01000085.1
  WCHH01000086.1
  WCHH01000087.1
  WCHH01000088.1
  WCHH01000089.1
  WCHH01000009.1
  WCHH01000090.1
  WCHH01000091.1
  WCHH01000092.1
  WCHH01000093.1
  WCHH01000094.1
  WCHH01000095.1
  WCHH01000096.1
  WCHH01000097.1
  WCHH01000098.1
  WCHH01000099.1

Compact view
WCHH01000002.1 - Region 1 - gallic_acid_met
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
Download region GenBank file
Location: 13,841 - 35,840 nt. (total: 22,000 nt) Show pHMM detection rules used
gallic_acid_met: (minimum(1, [Flavoprotein, Semialdhyde_dh]) and gallic_acid)

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
resistance genes
encapsulation genes
electron transport genes
other genes
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
KnownClusterBlast
Similar known gene clusters
Shows clusters from the gutSMASH KnownClusterBlast database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
WCHH01000033.1 - Region 1 - Arginine2_Hcarbonate
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
Download region GenBank file
Location: 3,507 - 20,185 nt. (total: 16,679 nt) Show pHMM detection rules used
Region on contig edge.
Arginine2_Hcarbonate: (Amidinotransf and OTCace and OTCace_N and AA_kinase)

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
resistance genes
encapsulation genes
electron transport genes
other genes
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
KnownClusterBlast
Similar known gene clusters
Shows clusters from the gutSMASH KnownClusterBlast database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.

No matches found.