GCA_014849095.1 - 4 region(s)

Identified primary metabolite regions

RKBX01000019.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 7.1	Arginine2_Hcarbonate	Other	28,729	46,004	Arginine to hydrogen carbonate P. aeruginosa	ARG	100%

RKBX01000039.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 16.1	TPP_fatty_acids	Putative	11,442	28,865

RKBX01000054.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 17.1	fatty_acids-unassigned	Putative	4,886	28,439

RKBX01000062.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 41.1	Nitrate_reductase	E-MGC	1	14,676	Nitrate reductase E. coli	NIR	40%

No primary metabolite regions were found in these records:: RKBX01000026.1; RKBX01000080.1; RKBX01000097.1; RKBX01000071.1; RKBX01000033.1; RKBX01000057.1; RKBX01000093.1; RKBX01000104.1; RKBX01000003.1; RKBX01000018.1; RKBX01000023.1; RKBX01000052.1; RKBX01000044.1; RKBX01000035.1; RKBX01000042.1; RKBX01000085.1; RKBX01000088.1; RKBX01000061.1; RKBX01000027.1; RKBX01000068.1; RKBX01000098.1; RKBX01000043.1; RKBX01000063.1; RKBX01000045.1; RKBX01000004.1; RKBX01000066.1; RKBX01000058.1; RKBX01000050.1; RKBX01000079.1; RKBX01000065.1; RKBX01000046.1; RKBX01000092.1; RKBX01000055.1; RKBX01000086.1; RKBX01000049.1; RKBX01000073.1; RKBX01000069.1; RKBX01000076.1; RKBX01000091.1; RKBX01000053.1; RKBX01000036.1; RKBX01000006.1; RKBX01000048.1; RKBX01000028.1; RKBX01000025.1; RKBX01000008.1; RKBX01000095.1; RKBX01000082.1; RKBX01000072.1; RKBX01000096.1; RKBX01000074.1; RKBX01000051.1; RKBX01000089.1; RKBX01000017.1; RKBX01000041.1; RKBX01000077.1; RKBX01000009.1; RKBX01000040.1; RKBX01000060.1; RKBX01000059.1; RKBX01000014.1; RKBX01000064.1; RKBX01000015.1; RKBX01000001.1; RKBX01000075.1; RKBX01000099.1; RKBX01000047.1; RKBX01000102.1; RKBX01000012.1; RKBX01000090.1; RKBX01000007.1; RKBX01000087.1; RKBX01000078.1; RKBX01000029.1; RKBX01000024.1; RKBX01000030.1; RKBX01000081.1; RKBX01000083.1; RKBX01000011.1; RKBX01000100.1; RKBX01000101.1; RKBX01000103.1; RKBX01000070.1; RKBX01000056.1; RKBX01000021.1; RKBX01000094.1; RKBX01000010.1; RKBX01000032.1; RKBX01000013.1; RKBX01000020.1; RKBX01000067.1; RKBX01000105.1; RKBX01000084.1; RKBX01000038.1; RKBX01000005.1; RKBX01000034.1; RKBX01000037.1; RKBX01000016.1; RKBX01000022.1; RKBX01000002.1; RKBX01000031.1

Compact view

RKBX01000019.1 - Region 1 - Arginine2_Hcarbonate

Download region GenBank file

Location: 28,729 - 46,004 nt. (total: 17,276 nt) Show pHMM detection rules used

Region on contig edge.

Arginine2_Hcarbonate: (Amidinotransf and OTCace and OTCace_N and AA_kinase)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

RKBX01000039.1 - Region 1 - TPP_fatty_acids

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Location: 11,442 - 28,865 nt. (total: 17,424 nt) Show pHMM detection rules used

Region on contig edge.

TPP_fatty_acids: (TPP_enzyme_C and (minimum(2, [ACD1_car, ACP_syn_III_C, AcetylCoA_hyd_C, AcetylCoA_hydro, Acyl-CoA_dh_1, Acyl-CoA_dh_2, Butyrate_kinase, CT_Propionyl_CoA1, CT_Propionyl_CoA2, CT_Propionyl_CoA3, Carboxyl_trans, CoA_trans, CoA_trans_230_acto, CoA_trans_2_CAF, CoA_trans_6_Glutaconate, E1_dh, ECH_1, ECH_2, HBT, HBT_2, HCDH, HpaB, Ketoacyl-synt_C, Thiolase_C, Thiolase_N, adh_short, adh_short_C2]) or FA_synthesis) and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and not (POR or POR_N))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

RKBX01000054.1 - Region 1 - fatty_acids-unassigned

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Location: 4,886 - 28,439 nt. (total: 23,554 nt) Show pHMM detection rules used

Region on contig edge.

fatty_acids-unassigned: (not (EC1_2-faecali or baiH or baiCD or ECH1_Enoyl_CoA_DH1 or ECH1_Enoyl_CoA_DH2 or ECH1_Enoyl_CoA_DH3 or ECH1_Enoyl_CoA_DH4 or POR or POR_N or PFOR_II) and minimum(4, [AcetylCoA_hyd_C, Acyl-CoA_dh_1, Acyl-CoA_dh_2, EC1_2-faecali, ECH1_8_CARC, ECH_1, ECH_2, HBT, HCDH, HCDH_N, Thiolase_C, Thiolase_N, ketoacyl-synt]))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

RKBX01000062.1 - Region 1 - Nitrate_reductase

Download region GenBank file

Location: 1 - 14,676 nt. (total: 14,676 nt) Show pHMM detection rules used

Region on contig edge.

Nitrate_reductase: (Nitr_red_bet_C and Nitrate_red_del and Nitrate_red_gam and Molybdopterin and minimum(2, [Fer4_11, Molybdopterin, Molydop_binding, Nitr_red_alph_N]))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters