GCA_015549755.1 - 2 region(s)

Identified primary metabolite regions

JADMZN010000010 (original name was: JADMZN010000010.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 1.1	Pyruvate2acetate-formate,Fumarate2succinate	SCFA	18,249	62,610	Pyruvate to acetate-formate E. coli	PFL_acetate	100%

JADMZN010000001 (original name was: JADMZN010000001.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 11.1	Others_HGD_unassigned	Putative	92,654	117,678

No primary metabolite regions were found in these records:: JADMZN010000011 (original name was: JADMZN010000011.1); JADMZN010000012 (original name was: JADMZN010000012.1); JADMZN010000013 (original name was: JADMZN010000013.1); JADMZN010000014 (original name was: JADMZN010000014.1); JADMZN010000015 (original name was: JADMZN010000015.1); JADMZN010000016 (original name was: JADMZN010000016.1); JADMZN010000017 (original name was: JADMZN010000017.1); JADMZN010000018 (original name was: JADMZN010000018.1); JADMZN010000019 (original name was: JADMZN010000019.1); JADMZN010000020 (original name was: JADMZN010000020.1); JADMZN010000021 (original name was: JADMZN010000021.1); JADMZN010000022 (original name was: JADMZN010000022.1); JADMZN010000023 (original name was: JADMZN010000023.1); JADMZN010000024 (original name was: JADMZN010000024.1); JADMZN010000025 (original name was: JADMZN010000025.1); JADMZN010000002 (original name was: JADMZN010000002.1); JADMZN010000003 (original name was: JADMZN010000003.1); JADMZN010000004 (original name was: JADMZN010000004.1); JADMZN010000005 (original name was: JADMZN010000005.1); JADMZN010000006 (original name was: JADMZN010000006.1); JADMZN010000007 (original name was: JADMZN010000007.1); JADMZN010000008 (original name was: JADMZN010000008.1); JADMZN010000009 (original name was: JADMZN010000009.1)

Compact view

c00001_JADMZN0.. - Region 1 - Fumarate2succinate,Pyruvate2acetate-formate

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Location: 18,249 - 62,610 nt. (total: 44,362 nt) Show pHMM detection rules used

Pyruvate2acetate-formate: ((PFL_acetate1 or PFL_acetate2) and Radical_SAM)
Fumarate2succinate: (Succ_DH_flav_C and FAD_binding_2 and (Fer2_3 or Fer4_7 or SucD_FumR))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

c00011_JADMZN0.. - Region 1 - Others_HGD_unassigned

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Location: 92,654 - 117,678 nt. (total: 25,025 nt) Show pHMM detection rules used

Others_HGD_unassigned: (minimum(1, [HAAA1, HG2B1, HG2B2, HGD-D, HleuD1, HleuD2, HleuS1, HleuS2, Lactoyl-CoA1, Lactoyl-CoA2]) and minimum(1, [ACP_syn_III, ACP_syn_III_C, AcetylCoA_hyd_C, AcetylCoA_hydro, Acyl-CoA_dh_1, Acyl-CoA_dh_2, AdoHcyase_NAD, AlaDh_PNT_C, BcrAD_BadFG, Biotin_lipoyl, Carboxyl_trans, CoA_trans, CoA_trans_230_acto, CoA_trans_6_Glutaconate, CoA_transf_3, ECH_1, ECH_2, ETF, ETF_alpha, FGGY_C, HCDH, HCDH_N, Hacid_dh, Hacid_dh_C, Mal_decarbox_Al, Peptidase_M22, Peptidase_M23, Thiolase_C, Thiolase_N, ketoacyl-synt]) and not (minimum(2, [AcetylCoA_hyd_C, BcrAD_BadFG, CoA_trans, CoA_trans_230_acto, Mal_decarbox_Al]) and Lactoyl-CoA2 and Lactoyl-CoA1) and not (minimum(4, [ACP_syn_III, ACP_syn_III_C, Acyl-CoA_dh_1, Acyl-CoA_dh_2, AlaDh_PNT_C, BcrAD_BadFG, ECH_1, ECH_2, ETF, ETF_alpha, HCDH, HCDH_N, Hacid_dh, Hacid_dh_C, IlvN, NAD_Gly3P_dh_N, Thiolase_C, Thiolase_N, ketoacyl-synt]) and HAAA1 and not HleuS1))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

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