GCA_015555495.1 - 2 region(s)

Identified primary metabolite regions

JADNKM010000014 (original name was: JADNKM010000014.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 5.1	TPP_AA_metabolism	Putative	44,981	58,459

JADNKM010000006 (original name was: JADNKM010000006.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 48.1	Oxidative_glycerol	Other	75,307	97,646

Region	Type	Class	From	To	Most similar known cluster	Similarity
Region 5.1	TPP_AA_metabolism	Putative	44,981	58,459
Region 48.1	Oxidative_glycerol	Other	75,307	97,646

No primary metabolite regions were found in these records:: JADNKM010000010 (original name was: JADNKM010000010.1); JADNKM010000011 (original name was: JADNKM010000011.1); JADNKM010000012 (original name was: JADNKM010000012.1); JADNKM010000013 (original name was: JADNKM010000013.1); JADNKM010000015 (original name was: JADNKM010000015.1); JADNKM010000016 (original name was: JADNKM010000016.1); JADNKM010000017 (original name was: JADNKM010000017.1); JADNKM010000018 (original name was: JADNKM010000018.1); JADNKM010000019 (original name was: JADNKM010000019.1); JADNKM010000001 (original name was: JADNKM010000001.1); JADNKM010000020 (original name was: JADNKM010000020.1); JADNKM010000021 (original name was: JADNKM010000021.1); JADNKM010000022 (original name was: JADNKM010000022.1); JADNKM010000023 (original name was: JADNKM010000023.1); JADNKM010000024 (original name was: JADNKM010000024.1); JADNKM010000025 (original name was: JADNKM010000025.1); JADNKM010000026 (original name was: JADNKM010000026.1); JADNKM010000027 (original name was: JADNKM010000027.1); JADNKM010000028 (original name was: JADNKM010000028.1); JADNKM010000029 (original name was: JADNKM010000029.1); JADNKM010000002 (original name was: JADNKM010000002.1); JADNKM010000030 (original name was: JADNKM010000030.1); JADNKM010000031 (original name was: JADNKM010000031.1); JADNKM010000032 (original name was: JADNKM010000032.1); JADNKM010000033 (original name was: JADNKM010000033.1); JADNKM010000034 (original name was: JADNKM010000034.1); JADNKM010000035 (original name was: JADNKM010000035.1); JADNKM010000036 (original name was: JADNKM010000036.1); JADNKM010000037 (original name was: JADNKM010000037.1); JADNKM010000038 (original name was: JADNKM010000038.1); JADNKM010000039 (original name was: JADNKM010000039.1); JADNKM010000003 (original name was: JADNKM010000003.1); JADNKM010000040 (original name was: JADNKM010000040.1); JADNKM010000041 (original name was: JADNKM010000041.1); JADNKM010000042 (original name was: JADNKM010000042.1); JADNKM010000043 (original name was: JADNKM010000043.1); JADNKM010000044 (original name was: JADNKM010000044.1); JADNKM010000045 (original name was: JADNKM010000045.1); JADNKM010000046 (original name was: JADNKM010000046.1); JADNKM010000047 (original name was: JADNKM010000047.1); JADNKM010000048 (original name was: JADNKM010000048.1); JADNKM010000049 (original name was: JADNKM010000049.1); JADNKM010000004 (original name was: JADNKM010000004.1); JADNKM010000050 (original name was: JADNKM010000050.1); JADNKM010000051 (original name was: JADNKM010000051.1); JADNKM010000005 (original name was: JADNKM010000005.1); JADNKM010000007 (original name was: JADNKM010000007.1); JADNKM010000008 (original name was: JADNKM010000008.1); JADNKM010000009 (original name was: JADNKM010000009.1)

Compact view

c00005_JADNKM0.. - Region 1 - TPP_AA_metabolism

Download region GenBank file

Location: 44,981 - 58,459 nt. (total: 13,479 nt) Show pHMM detection rules used

Region on contig edge.

TPP_AA_metabolism: (TPP_enzyme_C and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or Gly_8-9_TMA or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and minimum(2, [ALS_ss_C, AlaDh_PNT_C, Arginase, BKACE, BcrAD_BadFG, Beta_elim_lyase, CPSase_L_D2, Cys_Met_Meta_PP, ELFV_dehydrog, GRDB, Glu_syn_central, Glu_synthase, Gly_reductase, HAAA1, HG2B1, HG2B2, HGD-D, HleuD1, HleuD2, HleuS1, HleuS2, Homoserine_dh, ILVD_EDD, IlvC, Lactoyl-CoA1, Lactoyl-CoA2, Lyase_aromatic, MAAL_C, OKR_DC_1_5_lysine, OKR_DC_1_5_ornithine, OKR_DC_1_7_arginine, OKR_DC_1_C, OTCace, PALP, Proline_reductase, Sacchrp_dh_C, TPL, Thr_dehydrat_C, TnaA, Urocanase]) and not (POR or POR_N or PFOR_II))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

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c00048_JADNKM0.. - Region 1 - Oxidative_glycerol