GCA_015557145.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

JADNNS010000001 (original name was: JADNNS010000001.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 11.1	T3PKS	62,439	103,602

JADNNS010000006 (original name was: JADNNS010000006.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 37.1	RiPP-like	4,178	14,372	salivaricin CRL1328 α peptide / salivaricin CRL1328 β peptide	RiPP	58%
Region 37.2	lanthipeptide-class-i	27,682	53,648	nisin Q	RiPP:Lanthipeptide	63%

Region	Type	From	To	Most similar known cluster	Similarity
Region 11.1	T3PKS	62,439	103,602
Region 37.1	RiPP-like	4,178	14,372	salivaricin CRL1328 α peptide / salivaricin CRL1328 β peptide	RiPP	58%
Region 37.2	lanthipeptide-class-i	27,682	53,648	nisin Q	RiPP:Lanthipeptide	63%

No secondary metabolite regions were found in these records:: JADNNS010000010 (original name was: JADNNS010000010.1); JADNNS010000011 (original name was: JADNNS010000011.1); JADNNS010000012 (original name was: JADNNS010000012.1); JADNNS010000013 (original name was: JADNNS010000013.1); JADNNS010000014 (original name was: JADNNS010000014.1); JADNNS010000015 (original name was: JADNNS010000015.1); JADNNS010000016 (original name was: JADNNS010000016.1); JADNNS010000017 (original name was: JADNNS010000017.1); JADNNS010000018 (original name was: JADNNS010000018.1); JADNNS010000019 (original name was: JADNNS010000019.1); JADNNS010000020 (original name was: JADNNS010000020.1); JADNNS010000021 (original name was: JADNNS010000021.1); JADNNS010000022 (original name was: JADNNS010000022.1); JADNNS010000023 (original name was: JADNNS010000023.1); JADNNS010000024 (original name was: JADNNS010000024.1); JADNNS010000025 (original name was: JADNNS010000025.1); JADNNS010000026 (original name was: JADNNS010000026.1); JADNNS010000027 (original name was: JADNNS010000027.1); JADNNS010000028 (original name was: JADNNS010000028.1); JADNNS010000029 (original name was: JADNNS010000029.1); JADNNS010000002 (original name was: JADNNS010000002.1); JADNNS010000030 (original name was: JADNNS010000030.1); JADNNS010000031 (original name was: JADNNS010000031.1); JADNNS010000032 (original name was: JADNNS010000032.1); JADNNS010000033 (original name was: JADNNS010000033.1); JADNNS010000034 (original name was: JADNNS010000034.1); JADNNS010000035 (original name was: JADNNS010000035.1); JADNNS010000036 (original name was: JADNNS010000036.1); JADNNS010000037 (original name was: JADNNS010000037.1); JADNNS010000038 (original name was: JADNNS010000038.1); JADNNS010000039 (original name was: JADNNS010000039.1); JADNNS010000003 (original name was: JADNNS010000003.1); JADNNS010000040 (original name was: JADNNS010000040.1); JADNNS010000004 (original name was: JADNNS010000004.1); JADNNS010000005 (original name was: JADNNS010000005.1); JADNNS010000007 (original name was: JADNNS010000007.1); JADNNS010000008 (original name was: JADNNS010000008.1); JADNNS010000009 (original name was: JADNNS010000009.1)

Compact view

c00011_JADNNS0.. - Region 1 - T3PKS

Download region GenBank file

Download region SVG

Location: 62,439 - 103,602 nt. (total: 41,164 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.

c00037_JADNNS0.. - Region 1 - RiPP-like

Download region GenBank file

Download region SVG

Location: 4,178 - 14,372 nt. (total: 10,195 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

c00037_JADNNS0.. - Region 2 - lanthipeptide-class-i

Download region GenBank file

Download region SVG

Location: 27,682 - 53,648 nt. (total: 25,967 nt) Show pHMM detection rules used

lanthipeptide-class-i: ((LANC_like and (Lant_dehydr_N or Lant_dehydr_C)) and not (YcaO or TIGR03882))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Lanthipeptides

KnownClusterBlast

Lanthipeptide predictions

Lanthipeptide(s) for ctg37_43 - Putative Class I

ctg37_42 leader / core peptide: MSVNDFKLDLVKVSKESTNSNYSVK - IDhbDhaYDhaLCDhbPGCKDhbGALMGCDhbMKDhbADhaCGCHVHIDhaK

Legend:

Dha: Didehydroalanine
Dhb: Didehydrobutyrine

Similar known gene clusters

Lanthipeptides

Core peptide predictions

ctg37_42 - Class I

Cleavage pHMM score: 12.40

RODEO score: 26

Monoisotopic mass: 3326.6 Da

Molecular weight: 3329.0 Da

Number of bridges: 5

Alternative weights: (assuming N unmodified Ser/Thr residues); 3347.0 Da N = 1; 3365.0 Da N = 2; 3383.0 Da N = 3; 3401.1 Da N = 4