GCA_015670715.1 - 2 region(s)

Identified primary metabolite regions

JADPCF010000024 (original name was: JADPCF010000024.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 16.1	TPP_AA_metabolism	Putative	1	20,592

JADPCF010000005 (original name was: JADPCF010000005.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 45.1	Oxidative_glycerol	Other	35,468	59,675

Region	Type	Class	From	To	Most similar known cluster	Similarity
Region 16.1	TPP_AA_metabolism	Putative	1	20,592
Region 45.1	Oxidative_glycerol	Other	35,468	59,675

No primary metabolite regions were found in these records:: JADPCF010000010 (original name was: JADPCF010000010.1); JADPCF010000011 (original name was: JADPCF010000011.1); JADPCF010000012 (original name was: JADPCF010000012.1); JADPCF010000013 (original name was: JADPCF010000013.1); JADPCF010000014 (original name was: JADPCF010000014.1); JADPCF010000015 (original name was: JADPCF010000015.1); JADPCF010000016 (original name was: JADPCF010000016.1); JADPCF010000017 (original name was: JADPCF010000017.1); JADPCF010000018 (original name was: JADPCF010000018.1); JADPCF010000019 (original name was: JADPCF010000019.1); JADPCF010000001 (original name was: JADPCF010000001.1); JADPCF010000020 (original name was: JADPCF010000020.1); JADPCF010000021 (original name was: JADPCF010000021.1); JADPCF010000022 (original name was: JADPCF010000022.1); JADPCF010000023 (original name was: JADPCF010000023.1); JADPCF010000025 (original name was: JADPCF010000025.1); JADPCF010000026 (original name was: JADPCF010000026.1); JADPCF010000027 (original name was: JADPCF010000027.1); JADPCF010000028 (original name was: JADPCF010000028.1); JADPCF010000029 (original name was: JADPCF010000029.1); JADPCF010000002 (original name was: JADPCF010000002.1); JADPCF010000030 (original name was: JADPCF010000030.1); JADPCF010000031 (original name was: JADPCF010000031.1); JADPCF010000032 (original name was: JADPCF010000032.1); JADPCF010000033 (original name was: JADPCF010000033.1); JADPCF010000034 (original name was: JADPCF010000034.1); JADPCF010000035 (original name was: JADPCF010000035.1); JADPCF010000036 (original name was: JADPCF010000036.1); JADPCF010000037 (original name was: JADPCF010000037.1); JADPCF010000038 (original name was: JADPCF010000038.1); JADPCF010000039 (original name was: JADPCF010000039.1); JADPCF010000003 (original name was: JADPCF010000003.1); JADPCF010000040 (original name was: JADPCF010000040.1); JADPCF010000041 (original name was: JADPCF010000041.1); JADPCF010000042 (original name was: JADPCF010000042.1); JADPCF010000043 (original name was: JADPCF010000043.1); JADPCF010000044 (original name was: JADPCF010000044.1); JADPCF010000045 (original name was: JADPCF010000045.1); JADPCF010000046 (original name was: JADPCF010000046.1); JADPCF010000047 (original name was: JADPCF010000047.1); JADPCF010000004 (original name was: JADPCF010000004.1); JADPCF010000048 (original name was: JADPCF010000048.1); JADPCF010000049 (original name was: JADPCF010000049.1); JADPCF010000006 (original name was: JADPCF010000006.1); JADPCF010000007 (original name was: JADPCF010000007.1); JADPCF010000008 (original name was: JADPCF010000008.1); JADPCF010000009 (original name was: JADPCF010000009.1)

Compact view

c00016_JADPCF0.. - Region 1 - TPP_AA_metabolism

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Location: 1 - 20,592 nt. (total: 20,592 nt) Show pHMM detection rules used

Region on contig edge.

TPP_AA_metabolism: (TPP_enzyme_C and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or Gly_8-9_TMA or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and minimum(2, [ALS_ss_C, AlaDh_PNT_C, Arginase, BKACE, BcrAD_BadFG, Beta_elim_lyase, CPSase_L_D2, Cys_Met_Meta_PP, ELFV_dehydrog, GRDB, Glu_syn_central, Glu_synthase, Gly_reductase, HAAA1, HG2B1, HG2B2, HGD-D, HleuD1, HleuD2, HleuS1, HleuS2, Homoserine_dh, ILVD_EDD, IlvC, Lactoyl-CoA1, Lactoyl-CoA2, Lyase_aromatic, MAAL_C, OKR_DC_1_5_lysine, OKR_DC_1_5_ornithine, OKR_DC_1_7_arginine, OKR_DC_1_C, OTCace, PALP, Proline_reductase, Sacchrp_dh_C, TPL, Thr_dehydrat_C, TnaA, Urocanase]) and not (POR or POR_N or PFOR_II))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

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c00045_JADPCF0.. - Region 1 - Oxidative_glycerol