GCA_017367045.1 - 8 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

JACSUK010000001 (original name was: JACSUK010000001.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	RaS-RiPP	82,252	103,802

JACSUK010000015 (original name was: JACSUK010000015.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 6.1	RaS-RiPP	108,339	131,564

JACSUK010000020 (original name was: JACSUK010000020.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 12.1	RRE-containing	192,843	213,976

JACSUK010000028 (original name was: JACSUK010000028.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 17.1	NRPS-like	9,288	52,179	asukamycin	Polyketide:Type II	4%

JACSUK010000029 (original name was: JACSUK010000029.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 18.1	NRPS-like	1	7,053

JACSUK010000035 (original name was: JACSUK010000035.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 24.1	lanthipeptide-class-i	666	24,719

JACSUK010000008 (original name was: JACSUK010000008.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 33.1	RiPP-like	4,842	19,027

JACSUK010000009 (original name was: JACSUK010000009.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 34.1	RaS-RiPP	254,988	277,412	streptide	RiPP	100%

Region	Type	From	To	Most similar known cluster	Similarity
Region 1.1	RaS-RiPP	82,252	103,802
Region 6.1	RaS-RiPP	108,339	131,564
Region 12.1	RRE-containing	192,843	213,976
Region 17.1	NRPS-like	9,288	52,179	asukamycin	Polyketide:Type II	4%
Region 18.1	NRPS-like	1	7,053
Region 24.1	lanthipeptide-class-i	666	24,719
Region 33.1	RiPP-like	4,842	19,027
Region 34.1	RaS-RiPP	254,988	277,412	streptide	RiPP	100%

No secondary metabolite regions were found in these records:: JACSUK010000010 (original name was: JACSUK010000010.1); JACSUK010000011 (original name was: JACSUK010000011.1); JACSUK010000012 (original name was: JACSUK010000012.1); JACSUK010000014 (original name was: JACSUK010000014.1); JACSUK010000016 (original name was: JACSUK010000016.1); JACSUK010000017 (original name was: JACSUK010000017.1); JACSUK010000018 (original name was: JACSUK010000018.1); JACSUK010000019 (original name was: JACSUK010000019.1); JACSUK010000002 (original name was: JACSUK010000002.1); JACSUK010000021 (original name was: JACSUK010000021.1); JACSUK010000022 (original name was: JACSUK010000022.1); JACSUK010000023 (original name was: JACSUK010000023.1); JACSUK010000024 (original name was: JACSUK010000024.1); JACSUK010000003 (original name was: JACSUK010000003.1); JACSUK010000030 (original name was: JACSUK010000030.1); JACSUK010000032 (original name was: JACSUK010000032.1); JACSUK010000033 (original name was: JACSUK010000033.1); JACSUK010000034 (original name was: JACSUK010000034.1); JACSUK010000036 (original name was: JACSUK010000036.1); JACSUK010000037 (original name was: JACSUK010000037.1); JACSUK010000038 (original name was: JACSUK010000038.1); JACSUK010000039 (original name was: JACSUK010000039.1); JACSUK010000004 (original name was: JACSUK010000004.1); JACSUK010000005 (original name was: JACSUK010000005.1); JACSUK010000006 (original name was: JACSUK010000006.1); JACSUK010000007 (original name was: JACSUK010000007.1)

Compact view

c00001_JACSUK0.. - Region 1 - RaS-RiPP

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Location: 82,252 - 103,802 nt. (total: 21,551 nt) Show pHMM detection rules used

RaS-RiPP: (PF04055 and TIGR01716)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

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KnownClusterBlast

Similar known gene clusters

No matches found.

c00006_JACSUK0.. - Region 1 - RaS-RiPP

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Location: 108,339 - 131,564 nt. (total: 23,226 nt) Show pHMM detection rules used

RaS-RiPP: (PF04055 and TIGR01716)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

c00012_JACSUK0.. - Region 1 - RRE-containing

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Location: 192,843 - 213,976 nt. (total: 21,134 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

c00017_JACSUK0.. - Region 1 - NRPS-like

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Location: 9,288 - 52,179 nt. (total: 42,892 nt) Show pHMM detection rules used

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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NRPS/PKS domains

KnownClusterBlast

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters

c00018_JACSUK0.. - Region 1 - NRPS-like

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Location: 1 - 7,053 nt. (total: 7,053 nt) Show pHMM detection rules used

Region on contig edge.

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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NRPS/PKS domains

KnownClusterBlast

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters

No matches found.

c00024_JACSUK0.. - Region 1 - lanthipeptide-class-i

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Location: 666 - 24,719 nt. (total: 24,054 nt) Show pHMM detection rules used

lanthipeptide-class-i: ((LANC_like and (Lant_dehydr_N or Lant_dehydr_C)) and not (YcaO or TIGR03882))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Lanthipeptides

KnownClusterBlast

Lanthipeptide predictions

Lanthipeptides - No core peptides found.

Similar known gene clusters

No matches found.

Lanthipeptides

Core peptide predictions

No core peptides found.

c00033_JACSUK0.. - Region 1 - RiPP-like

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Location: 4,842 - 19,027 nt. (total: 14,186 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

c00034_JACSUK0.. - Region 1 - RaS-RiPP

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Location: 254,988 - 277,412 nt. (total: 22,425 nt) Show pHMM detection rules used

RaS-RiPP: (PF04055 and TIGR01716)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters