GCA_017367285.1 - 8 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

JACSUR010000001 (original name was: JACSUR010000001.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	RaS-RiPP	82,252	103,802

JACSUR010000013 (original name was: JACSUR010000013.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 5.1	RaS-RiPP	231,980	255,205

JACSUR010000022 (original name was: JACSUR010000022.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 14.1	RRE-containing	192,843	213,976

JACSUR010000029 (original name was: JACSUR010000029.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 20.1	NRPS-like	10,109	53,000	asukamycin	Polyketide:Type II	4%

JACSUR010000030 (original name was: JACSUR010000030.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 22.1	NRPS-like	1	7,053

JACSUR010000035 (original name was: JACSUR010000035.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 25.1	lanthipeptide-class-i	20,464	44,517

JACSUR010000007 (original name was: JACSUR010000007.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 32.1	RiPP-like	4,843	19,028

JACSUR010000009 (original name was: JACSUR010000009.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 34.1	RaS-RiPP	254,988	277,412	streptide	RiPP	100%

Region	Type	From	To	Most similar known cluster	Similarity
Region 1.1	RaS-RiPP	82,252	103,802
Region 5.1	RaS-RiPP	231,980	255,205
Region 14.1	RRE-containing	192,843	213,976
Region 20.1	NRPS-like	10,109	53,000	asukamycin	Polyketide:Type II	4%
Region 22.1	NRPS-like	1	7,053
Region 25.1	lanthipeptide-class-i	20,464	44,517
Region 32.1	RiPP-like	4,843	19,028
Region 34.1	RaS-RiPP	254,988	277,412	streptide	RiPP	100%

No secondary metabolite regions were found in these records:: JACSUR010000010 (original name was: JACSUR010000010.1); JACSUR010000011 (original name was: JACSUR010000011.1); JACSUR010000012 (original name was: JACSUR010000012.1); JACSUR010000014 (original name was: JACSUR010000014.1); JACSUR010000015 (original name was: JACSUR010000015.1); JACSUR010000016 (original name was: JACSUR010000016.1); JACSUR010000017 (original name was: JACSUR010000017.1); JACSUR010000018 (original name was: JACSUR010000018.1); JACSUR010000002 (original name was: JACSUR010000002.1); JACSUR010000020 (original name was: JACSUR010000020.1); JACSUR010000021 (original name was: JACSUR010000021.1); JACSUR010000023 (original name was: JACSUR010000023.1); JACSUR010000024 (original name was: JACSUR010000024.1); JACSUR010000026 (original name was: JACSUR010000026.1); JACSUR010000027 (original name was: JACSUR010000027.1); JACSUR010000028 (original name was: JACSUR010000028.1); JACSUR010000003 (original name was: JACSUR010000003.1); JACSUR010000031 (original name was: JACSUR010000031.1); JACSUR010000033 (original name was: JACSUR010000033.1); JACSUR010000036 (original name was: JACSUR010000036.1); JACSUR010000037 (original name was: JACSUR010000037.1); JACSUR010000038 (original name was: JACSUR010000038.1); JACSUR010000004 (original name was: JACSUR010000004.1); JACSUR010000005 (original name was: JACSUR010000005.1); JACSUR010000006 (original name was: JACSUR010000006.1); JACSUR010000008 (original name was: JACSUR010000008.1)

Compact view

c00001_JACSUR0.. - Region 1 - RaS-RiPP

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Location: 82,252 - 103,802 nt. (total: 21,551 nt) Show pHMM detection rules used

RaS-RiPP: (PF04055 and TIGR01716)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

c00005_JACSUR0.. - Region 1 - RaS-RiPP

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Location: 231,980 - 255,205 nt. (total: 23,226 nt) Show pHMM detection rules used

RaS-RiPP: (PF04055 and TIGR01716)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

c00014_JACSUR0.. - Region 1 - RRE-containing

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Location: 192,843 - 213,976 nt. (total: 21,134 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.

c00020_JACSUR0.. - Region 1 - NRPS-like

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Location: 10,109 - 53,000 nt. (total: 42,892 nt) Show pHMM detection rules used

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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NRPS/PKS domains

KnownClusterBlast

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters

c00022_JACSUR0.. - Region 1 - NRPS-like

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Location: 1 - 7,053 nt. (total: 7,053 nt) Show pHMM detection rules used

Region on contig edge.

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

NRPS/PKS domains

KnownClusterBlast

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters

No matches found.

c00025_JACSUR0.. - Region 1 - lanthipeptide-class-i

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Location: 20,464 - 44,517 nt. (total: 24,054 nt) Show pHMM detection rules used

lanthipeptide-class-i: ((LANC_like and (Lant_dehydr_N or Lant_dehydr_C)) and not (YcaO or TIGR03882))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Lanthipeptides

KnownClusterBlast

Lanthipeptide predictions

Lanthipeptides - No core peptides found.

Similar known gene clusters

No matches found.

Lanthipeptides

Core peptide predictions

No core peptides found.

c00032_JACSUR0.. - Region 1 - RiPP-like

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Location: 4,843 - 19,028 nt. (total: 14,186 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

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Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.

c00034_JACSUR0.. - Region 1 - RaS-RiPP

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Location: 254,988 - 277,412 nt. (total: 22,425 nt) Show pHMM detection rules used

RaS-RiPP: (PF04055 and TIGR01716)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters