GCA_017367305.1 - 8 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

JACSUQ010000001 (original name was: JACSUQ010000001.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	RaS-RiPP	82,449	103,999

JACSUQ010000020 (original name was: JACSUQ010000020.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 10.1	RaS-RiPP	103,027	126,252

JACSUQ010000029 (original name was: JACSUQ010000029.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 18.1	RRE-containing	192,843	213,976

JACSUQ010000041 (original name was: JACSUQ010000041.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 26.1	NRPS-like	8,838	51,729	asukamycin	Polyketide:Type II	4%

JACSUQ010000042 (original name was: JACSUQ010000042.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 27.1	NRPS-like	1	7,053

JACSUQ010000048 (original name was: JACSUQ010000048.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 33.1	lanthipeptide-class-i	1	23,752

JACSUQ010000008 (original name was: JACSUQ010000008.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 41.1	RiPP-like	4,842	19,027

JACSUQ010000009 (original name was: JACSUQ010000009.1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 42.1	RaS-RiPP	254,988	277,412	streptide	RiPP	100%

Region	Type	From	To	Most similar known cluster	Similarity
Region 1.1	RaS-RiPP	82,449	103,999
Region 10.1	RaS-RiPP	103,027	126,252
Region 18.1	RRE-containing	192,843	213,976
Region 26.1	NRPS-like	8,838	51,729	asukamycin	Polyketide:Type II	4%
Region 27.1	NRPS-like	1	7,053
Region 33.1	lanthipeptide-class-i	1	23,752
Region 41.1	RiPP-like	4,842	19,027
Region 42.1	RaS-RiPP	254,988	277,412	streptide	RiPP	100%

No secondary metabolite regions were found in these records:: JACSUQ010000010 (original name was: JACSUQ010000010.1); JACSUQ010000011 (original name was: JACSUQ010000011.1); JACSUQ010000012 (original name was: JACSUQ010000012.1); JACSUQ010000013 (original name was: JACSUQ010000013.1); JACSUQ010000017 (original name was: JACSUQ010000017.1); JACSUQ010000018 (original name was: JACSUQ010000018.1); JACSUQ010000019 (original name was: JACSUQ010000019.1); JACSUQ010000002 (original name was: JACSUQ010000002.1); JACSUQ010000021 (original name was: JACSUQ010000021.1); JACSUQ010000022 (original name was: JACSUQ010000022.1); JACSUQ010000023 (original name was: JACSUQ010000023.1); JACSUQ010000024 (original name was: JACSUQ010000024.1); JACSUQ010000026 (original name was: JACSUQ010000026.1); JACSUQ010000027 (original name was: JACSUQ010000027.1); JACSUQ010000028 (original name was: JACSUQ010000028.1); JACSUQ010000003 (original name was: JACSUQ010000003.1); JACSUQ010000030 (original name was: JACSUQ010000030.1); JACSUQ010000032 (original name was: JACSUQ010000032.1); JACSUQ010000033 (original name was: JACSUQ010000033.1); JACSUQ010000036 (original name was: JACSUQ010000036.1); JACSUQ010000037 (original name was: JACSUQ010000037.1); JACSUQ010000004 (original name was: JACSUQ010000004.1); JACSUQ010000043 (original name was: JACSUQ010000043.1); JACSUQ010000044 (original name was: JACSUQ010000044.1); JACSUQ010000045 (original name was: JACSUQ010000045.1); JACSUQ010000046 (original name was: JACSUQ010000046.1); JACSUQ010000047 (original name was: JACSUQ010000047.1); JACSUQ010000049 (original name was: JACSUQ010000049.1); JACSUQ010000005 (original name was: JACSUQ010000005.1); JACSUQ010000050 (original name was: JACSUQ010000050.1); JACSUQ010000052 (original name was: JACSUQ010000052.1); JACSUQ010000053 (original name was: JACSUQ010000053.1); JACSUQ010000006 (original name was: JACSUQ010000006.1); JACSUQ010000007 (original name was: JACSUQ010000007.1)

Compact view

c00001_JACSUQ0.. - Region 1 - RaS-RiPP

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Location: 82,449 - 103,999 nt. (total: 21,551 nt) Show pHMM detection rules used

RaS-RiPP: (PF04055 and TIGR01716)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

c00010_JACSUQ0.. - Region 1 - RaS-RiPP

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Location: 103,027 - 126,252 nt. (total: 23,226 nt) Show pHMM detection rules used

RaS-RiPP: (PF04055 and TIGR01716)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

c00018_JACSUQ0.. - Region 1 - RRE-containing

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Location: 192,843 - 213,976 nt. (total: 21,134 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

c00026_JACSUQ0.. - Region 1 - NRPS-like

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Location: 8,838 - 51,729 nt. (total: 42,892 nt) Show pHMM detection rules used

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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NRPS/PKS domains

KnownClusterBlast

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters

c00027_JACSUQ0.. - Region 1 - NRPS-like

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Location: 1 - 7,053 nt. (total: 7,053 nt) Show pHMM detection rules used

Region on contig edge.

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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NRPS/PKS domains

KnownClusterBlast

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters

No matches found.

c00033_JACSUQ0.. - Region 1 - lanthipeptide-class-i

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Location: 1 - 23,752 nt. (total: 23,752 nt) Show pHMM detection rules used

Region on contig edge.

lanthipeptide-class-i: ((LANC_like and (Lant_dehydr_N or Lant_dehydr_C)) and not (YcaO or TIGR03882))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Lanthipeptides

KnownClusterBlast

Lanthipeptide predictions

Lanthipeptides - No core peptides found.

Similar known gene clusters

No matches found.

Lanthipeptides

Core peptide predictions

No core peptides found.

c00041_JACSUQ0.. - Region 1 - RiPP-like

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Location: 4,842 - 19,027 nt. (total: 14,186 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

c00042_JACSUQ0.. - Region 1 - RaS-RiPP

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Location: 254,988 - 277,412 nt. (total: 22,425 nt) Show pHMM detection rules used

RaS-RiPP: (PF04055 and TIGR01716)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters