GCA_018368015.1 - 3 region(s)

Identified primary metabolite regions

JAGZFC010000011 (original name was: JAGZFC010000011.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 25.1	TPP_AA_metabolism	Putative	1	26,403

JAGZFC010000033 (original name was: JAGZFC010000033.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 48.1	gallic_acid_met	Aromatic	8,389	25,859	Gallic acid degradation B. sp. KLE	GALL	100%

JAGZFC010000044 (original name was: JAGZFC010000044.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 60.1	TPP_fatty_acids	Putative	1	18,376

Region	Type	Class	From	To	Most similar known cluster	Similarity
Region 25.1	TPP_AA_metabolism	Putative	1	26,403
Region 48.1	gallic_acid_met	Aromatic	8,389	25,859	Gallic acid degradation B. sp. KLE	GALL	100%
Region 60.1	TPP_fatty_acids	Putative	1	18,376

No primary metabolite regions were found in these records:: JAGZFC010000080 (original name was: JAGZFC010000080.1); JAGZFC010000003 (original name was: JAGZFC010000003.1); JAGZFC010000081 (original name was: JAGZFC010000081.1); JAGZFC010000082 (original name was: JAGZFC010000082.1); JAGZFC010000083 (original name was: JAGZFC010000083.1); JAGZFC010000084 (original name was: JAGZFC010000084.1); JAGZFC010000085 (original name was: JAGZFC010000085.1); JAGZFC010000004 (original name was: JAGZFC010000004.1); JAGZFC010000086 (original name was: JAGZFC010000086.1); JAGZFC010000087 (original name was: JAGZFC010000087.1); JAGZFC010000088 (original name was: JAGZFC010000088.1); JAGZFC010000089 (original name was: JAGZFC010000089.1); JAGZFC010000005 (original name was: JAGZFC010000005.1); JAGZFC010000090 (original name was: JAGZFC010000090.1); JAGZFC010000091 (original name was: JAGZFC010000091.1); JAGZFC010000092 (original name was: JAGZFC010000092.1); JAGZFC010000006 (original name was: JAGZFC010000006.1); JAGZFC010000093 (original name was: JAGZFC010000093.1); JAGZFC010000007 (original name was: JAGZFC010000007.1); JAGZFC010000008 (original name was: JAGZFC010000008.1); JAGZFC010000094 (original name was: JAGZFC010000094.1); JAGZFC010000009 (original name was: JAGZFC010000009.1); JAGZFC010000095 (original name was: JAGZFC010000095.1); JAGZFC010000010 (original name was: JAGZFC010000010.1); JAGZFC010000012 (original name was: JAGZFC010000012.1); JAGZFC010000096 (original name was: JAGZFC010000096.1); JAGZFC010000013 (original name was: JAGZFC010000013.1); JAGZFC010000014 (original name was: JAGZFC010000014.1); JAGZFC010000015 (original name was: JAGZFC010000015.1); JAGZFC010000016 (original name was: JAGZFC010000016.1); JAGZFC010000017 (original name was: JAGZFC010000017.1); JAGZFC010000018 (original name was: JAGZFC010000018.1); JAGZFC010000019 (original name was: JAGZFC010000019.1); JAGZFC010000020 (original name was: JAGZFC010000020.1); JAGZFC010000021 (original name was: JAGZFC010000021.1); JAGZFC010000022 (original name was: JAGZFC010000022.1); JAGZFC010000023 (original name was: JAGZFC010000023.1); JAGZFC010000024 (original name was: JAGZFC010000024.1); JAGZFC010000025 (original name was: JAGZFC010000025.1); JAGZFC010000026 (original name was: JAGZFC010000026.1); JAGZFC010000027 (original name was: JAGZFC010000027.1); JAGZFC010000028 (original name was: JAGZFC010000028.1); JAGZFC010000029 (original name was: JAGZFC010000029.1); JAGZFC010000030 (original name was: JAGZFC010000030.1); JAGZFC010000031 (original name was: JAGZFC010000031.1); JAGZFC010000032 (original name was: JAGZFC010000032.1); JAGZFC010000034 (original name was: JAGZFC010000034.1); JAGZFC010000035 (original name was: JAGZFC010000035.1); JAGZFC010000036 (original name was: JAGZFC010000036.1); JAGZFC010000001 (original name was: JAGZFC010000001.1); JAGZFC010000037 (original name was: JAGZFC010000037.1); JAGZFC010000038 (original name was: JAGZFC010000038.1); JAGZFC010000039 (original name was: JAGZFC010000039.1); JAGZFC010000040 (original name was: JAGZFC010000040.1); JAGZFC010000041 (original name was: JAGZFC010000041.1); JAGZFC010000042 (original name was: JAGZFC010000042.1); JAGZFC010000043 (original name was: JAGZFC010000043.1); JAGZFC010000045 (original name was: JAGZFC010000045.1); JAGZFC010000046 (original name was: JAGZFC010000046.1); JAGZFC010000047 (original name was: JAGZFC010000047.1); JAGZFC010000048 (original name was: JAGZFC010000048.1); JAGZFC010000049 (original name was: JAGZFC010000049.1); JAGZFC010000050 (original name was: JAGZFC010000050.1); JAGZFC010000051 (original name was: JAGZFC010000051.1); JAGZFC010000052 (original name was: JAGZFC010000052.1); JAGZFC010000053 (original name was: JAGZFC010000053.1); JAGZFC010000054 (original name was: JAGZFC010000054.1); JAGZFC010000055 (original name was: JAGZFC010000055.1); JAGZFC010000056 (original name was: JAGZFC010000056.1); JAGZFC010000057 (original name was: JAGZFC010000057.1); JAGZFC010000058 (original name was: JAGZFC010000058.1); JAGZFC010000059 (original name was: JAGZFC010000059.1); JAGZFC010000060 (original name was: JAGZFC010000060.1); JAGZFC010000061 (original name was: JAGZFC010000061.1); JAGZFC010000062 (original name was: JAGZFC010000062.1); JAGZFC010000063 (original name was: JAGZFC010000063.1); JAGZFC010000064 (original name was: JAGZFC010000064.1); JAGZFC010000065 (original name was: JAGZFC010000065.1); JAGZFC010000002 (original name was: JAGZFC010000002.1); JAGZFC010000066 (original name was: JAGZFC010000066.1); JAGZFC010000067 (original name was: JAGZFC010000067.1); JAGZFC010000068 (original name was: JAGZFC010000068.1); JAGZFC010000069 (original name was: JAGZFC010000069.1); JAGZFC010000070 (original name was: JAGZFC010000070.1); JAGZFC010000071 (original name was: JAGZFC010000071.1); JAGZFC010000072 (original name was: JAGZFC010000072.1); JAGZFC010000073 (original name was: JAGZFC010000073.1); JAGZFC010000074 (original name was: JAGZFC010000074.1); JAGZFC010000075 (original name was: JAGZFC010000075.1); JAGZFC010000076 (original name was: JAGZFC010000076.1); JAGZFC010000077 (original name was: JAGZFC010000077.1); JAGZFC010000078 (original name was: JAGZFC010000078.1); JAGZFC010000079 (original name was: JAGZFC010000079.1)

Compact view

c00025_JAGZFC0.. - Region 1 - TPP_AA_metabolism

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Location: 1 - 26,403 nt. (total: 26,403 nt) Show pHMM detection rules used

Region on contig edge.

TPP_AA_metabolism: (TPP_enzyme_C and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or Gly_8-9_TMA or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and minimum(2, [ALS_ss_C, AlaDh_PNT_C, Arginase, BKACE, BcrAD_BadFG, Beta_elim_lyase, CPSase_L_D2, Cys_Met_Meta_PP, ELFV_dehydrog, GRDB, Glu_syn_central, Glu_synthase, Gly_reductase, HAAA1, HG2B1, HG2B2, HGD-D, HleuD1, HleuD2, HleuS1, HleuS2, Homoserine_dh, ILVD_EDD, IlvC, Lactoyl-CoA1, Lactoyl-CoA2, Lyase_aromatic, MAAL_C, OKR_DC_1_5_lysine, OKR_DC_1_5_ornithine, OKR_DC_1_7_arginine, OKR_DC_1_C, OTCace, PALP, Proline_reductase, Sacchrp_dh_C, TPL, Thr_dehydrat_C, TnaA, Urocanase]) and not (POR or POR_N or PFOR_II))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

c00048_JAGZFC0.. - Region 1 - gallic_acid_met

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Location: 8,389 - 25,859 nt. (total: 17,471 nt) Show pHMM detection rules used

Region on contig edge.

gallic_acid_met: (minimum(1, [Flavoprotein, Semialdhyde_dh]) and gallic_acid)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

c00060_JAGZFC0.. - Region 1 - TPP_fatty_acids

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Location: 1 - 18,376 nt. (total: 18,376 nt) Show pHMM detection rules used

Region on contig edge.

TPP_fatty_acids: (TPP_enzyme_C and (minimum(2, [ACD1_car, ACP_syn_III_C, AcetylCoA_hyd_C, AcetylCoA_hydro, Acyl-CoA_dh_1, Acyl-CoA_dh_2, Butyrate_kinase, CT_Propionyl_CoA1, CT_Propionyl_CoA2, CT_Propionyl_CoA3, Carboxyl_trans, CoA_trans, CoA_trans_230_acto, CoA_trans_2_CAF, CoA_trans_6_Glutaconate, E1_dh, ECH_1, ECH_2, HBT, HBT_2, HCDH, HpaB, Ketoacyl-synt_C, Thiolase_C, Thiolase_N, adh_short, adh_short_C2]) or FA_synthesis) and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and not (POR or POR_N))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.