GCA_018375565.1 - 2 region(s)

Identified primary metabolite regions

JAHADA010000003 (original name was: JAHADA010000003.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 5.1	Oxidative_glycerol	Other	17,467	41,674

JAHADA010000020 (original name was: JAHADA010000020.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 64.1	TPP_AA_metabolism	Putative	1	26,499

Region	Type	Class	From	To	Most similar known cluster	Similarity
Region 5.1	Oxidative_glycerol	Other	17,467	41,674
Region 64.1	TPP_AA_metabolism	Putative	1	26,499

No primary metabolite regions were found in these records:: JAHADA010000022 (original name was: JAHADA010000022.1); JAHADA010000023 (original name was: JAHADA010000023.1); JAHADA010000024 (original name was: JAHADA010000024.1); JAHADA010000025 (original name was: JAHADA010000025.1); JAHADA010000026 (original name was: JAHADA010000026.1); JAHADA010000066 (original name was: JAHADA010000066.1); JAHADA010000067 (original name was: JAHADA010000067.1); JAHADA010000027 (original name was: JAHADA010000027.1); JAHADA010000028 (original name was: JAHADA010000028.1); JAHADA010000029 (original name was: JAHADA010000029.1); JAHADA010000030 (original name was: JAHADA010000030.1); JAHADA010000031 (original name was: JAHADA010000031.1); JAHADA010000032 (original name was: JAHADA010000032.1); JAHADA010000033 (original name was: JAHADA010000033.1); JAHADA010000034 (original name was: JAHADA010000034.1); JAHADA010000035 (original name was: JAHADA010000035.1); JAHADA010000036 (original name was: JAHADA010000036.1); JAHADA010000004 (original name was: JAHADA010000004.1); JAHADA010000037 (original name was: JAHADA010000037.1); JAHADA010000038 (original name was: JAHADA010000038.1); JAHADA010000039 (original name was: JAHADA010000039.1); JAHADA010000040 (original name was: JAHADA010000040.1); JAHADA010000041 (original name was: JAHADA010000041.1); JAHADA010000042 (original name was: JAHADA010000042.1); JAHADA010000005 (original name was: JAHADA010000005.1); JAHADA010000006 (original name was: JAHADA010000006.1); JAHADA010000043 (original name was: JAHADA010000043.1); JAHADA010000007 (original name was: JAHADA010000007.1); JAHADA010000044 (original name was: JAHADA010000044.1); JAHADA010000008 (original name was: JAHADA010000008.1); JAHADA010000045 (original name was: JAHADA010000045.1); JAHADA010000046 (original name was: JAHADA010000046.1); JAHADA010000047 (original name was: JAHADA010000047.1); JAHADA010000048 (original name was: JAHADA010000048.1); JAHADA010000049 (original name was: JAHADA010000049.1); JAHADA010000050 (original name was: JAHADA010000050.1); JAHADA010000051 (original name was: JAHADA010000051.1); JAHADA010000052 (original name was: JAHADA010000052.1); JAHADA010000053 (original name was: JAHADA010000053.1); JAHADA010000054 (original name was: JAHADA010000054.1); JAHADA010000055 (original name was: JAHADA010000055.1); JAHADA010000056 (original name was: JAHADA010000056.1); JAHADA010000057 (original name was: JAHADA010000057.1); JAHADA010000009 (original name was: JAHADA010000009.1); JAHADA010000058 (original name was: JAHADA010000058.1); JAHADA010000010 (original name was: JAHADA010000010.1); JAHADA010000059 (original name was: JAHADA010000059.1); JAHADA010000060 (original name was: JAHADA010000060.1); JAHADA010000011 (original name was: JAHADA010000011.1); JAHADA010000012 (original name was: JAHADA010000012.1); JAHADA010000061 (original name was: JAHADA010000061.1); JAHADA010000062 (original name was: JAHADA010000062.1); JAHADA010000013 (original name was: JAHADA010000013.1); JAHADA010000014 (original name was: JAHADA010000014.1); JAHADA010000015 (original name was: JAHADA010000015.1); JAHADA010000001 (original name was: JAHADA010000001.1); JAHADA010000016 (original name was: JAHADA010000016.1); JAHADA010000063 (original name was: JAHADA010000063.1); JAHADA010000002 (original name was: JAHADA010000002.1); JAHADA010000017 (original name was: JAHADA010000017.1); JAHADA010000018 (original name was: JAHADA010000018.1); JAHADA010000019 (original name was: JAHADA010000019.1); JAHADA010000064 (original name was: JAHADA010000064.1); JAHADA010000021 (original name was: JAHADA010000021.1); JAHADA010000065 (original name was: JAHADA010000065.1)

Compact view

c00005_JAHADA0.. - Region 1 - Oxidative_glycerol

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Location: 17,467 - 41,674 nt. (total: 24,208 nt) Show pHMM detection rules used

Oxidative_glycerol: ((Fe-ADH or Fe-ADH_2) and Dak1 and Dak2)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.

c00064_JAHADA0.. - Region 1 - TPP_AA_metabolism

Download region GenBank file

Location: 1 - 26,499 nt. (total: 26,499 nt) Show pHMM detection rules used

Region on contig edge.

TPP_AA_metabolism: (TPP_enzyme_C and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or Gly_8-9_TMA or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and minimum(2, [ALS_ss_C, AlaDh_PNT_C, Arginase, BKACE, BcrAD_BadFG, Beta_elim_lyase, CPSase_L_D2, Cys_Met_Meta_PP, ELFV_dehydrog, GRDB, Glu_syn_central, Glu_synthase, Gly_reductase, HAAA1, HG2B1, HG2B2, HGD-D, HleuD1, HleuD2, HleuS1, HleuS2, Homoserine_dh, ILVD_EDD, IlvC, Lactoyl-CoA1, Lactoyl-CoA2, Lyase_aromatic, MAAL_C, OKR_DC_1_5_lysine, OKR_DC_1_5_ornithine, OKR_DC_1_7_arginine, OKR_DC_1_C, OTCace, PALP, Proline_reductase, Sacchrp_dh_C, TPL, Thr_dehydrat_C, TnaA, Urocanase]) and not (POR or POR_N or PFOR_II))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.