GCA_018377295.1 - 2 region(s)

Identified primary metabolite regions

JAGZZQ010000044 (original name was: JAGZZQ010000044.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 97.1	TPP_AA_metabolism	Putative	1	17,590

JAGZZQ010000045 (original name was: JAGZZQ010000045.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 98.1	Oxidative_glycerol	Other	1	13,548

Region	Type	Class	From	To	Most similar known cluster	Similarity
Region 97.1	TPP_AA_metabolism	Putative	1	17,590
Region 98.1	Oxidative_glycerol	Other	1	13,548

No primary metabolite regions were found in these records:: JAGZZQ010000046 (original name was: JAGZZQ010000046.1); JAGZZQ010000047 (original name was: JAGZZQ010000047.1); JAGZZQ010000048 (original name was: JAGZZQ010000048.1); JAGZZQ010000049 (original name was: JAGZZQ010000049.1); JAGZZQ010000005 (original name was: JAGZZQ010000005.1); JAGZZQ010000050 (original name was: JAGZZQ010000050.1); JAGZZQ010000051 (original name was: JAGZZQ010000051.1); JAGZZQ010000052 (original name was: JAGZZQ010000052.1); JAGZZQ010000053 (original name was: JAGZZQ010000053.1); JAGZZQ010000054 (original name was: JAGZZQ010000054.1); JAGZZQ010000055 (original name was: JAGZZQ010000055.1); JAGZZQ010000006 (original name was: JAGZZQ010000006.1); JAGZZQ010000056 (original name was: JAGZZQ010000056.1); JAGZZQ010000057 (original name was: JAGZZQ010000057.1); JAGZZQ010000058 (original name was: JAGZZQ010000058.1); JAGZZQ010000059 (original name was: JAGZZQ010000059.1); JAGZZQ010000060 (original name was: JAGZZQ010000060.1); JAGZZQ010000061 (original name was: JAGZZQ010000061.1); JAGZZQ010000062 (original name was: JAGZZQ010000062.1); JAGZZQ010000063 (original name was: JAGZZQ010000063.1); JAGZZQ010000007 (original name was: JAGZZQ010000007.1); JAGZZQ010000064 (original name was: JAGZZQ010000064.1); JAGZZQ010000008 (original name was: JAGZZQ010000008.1); JAGZZQ010000065 (original name was: JAGZZQ010000065.1); JAGZZQ010000009 (original name was: JAGZZQ010000009.1); JAGZZQ010000010 (original name was: JAGZZQ010000010.1); JAGZZQ010000066 (original name was: JAGZZQ010000066.1); JAGZZQ010000067 (original name was: JAGZZQ010000067.1); JAGZZQ010000068 (original name was: JAGZZQ010000068.1); JAGZZQ010000069 (original name was: JAGZZQ010000069.1); JAGZZQ010000070 (original name was: JAGZZQ010000070.1); JAGZZQ010000011 (original name was: JAGZZQ010000011.1); JAGZZQ010000071 (original name was: JAGZZQ010000071.1); JAGZZQ010000072 (original name was: JAGZZQ010000072.1); JAGZZQ010000073 (original name was: JAGZZQ010000073.1); JAGZZQ010000012 (original name was: JAGZZQ010000012.1); JAGZZQ010000013 (original name was: JAGZZQ010000013.1); JAGZZQ010000074 (original name was: JAGZZQ010000074.1); JAGZZQ010000075 (original name was: JAGZZQ010000075.1); JAGZZQ010000076 (original name was: JAGZZQ010000076.1); JAGZZQ010000014 (original name was: JAGZZQ010000014.1); JAGZZQ010000015 (original name was: JAGZZQ010000015.1); JAGZZQ010000077 (original name was: JAGZZQ010000077.1); JAGZZQ010000016 (original name was: JAGZZQ010000016.1); JAGZZQ010000078 (original name was: JAGZZQ010000078.1); JAGZZQ010000017 (original name was: JAGZZQ010000017.1); JAGZZQ010000018 (original name was: JAGZZQ010000018.1); JAGZZQ010000019 (original name was: JAGZZQ010000019.1); JAGZZQ010000079 (original name was: JAGZZQ010000079.1); JAGZZQ010000080 (original name was: JAGZZQ010000080.1); JAGZZQ010000081 (original name was: JAGZZQ010000081.1); JAGZZQ010000020 (original name was: JAGZZQ010000020.1); JAGZZQ010000082 (original name was: JAGZZQ010000082.1); JAGZZQ010000083 (original name was: JAGZZQ010000083.1); JAGZZQ010000021 (original name was: JAGZZQ010000021.1); JAGZZQ010000022 (original name was: JAGZZQ010000022.1); JAGZZQ010000023 (original name was: JAGZZQ010000023.1); JAGZZQ010000024 (original name was: JAGZZQ010000024.1); JAGZZQ010000025 (original name was: JAGZZQ010000025.1); JAGZZQ010000026 (original name was: JAGZZQ010000026.1); JAGZZQ010000084 (original name was: JAGZZQ010000084.1); JAGZZQ010000085 (original name was: JAGZZQ010000085.1); JAGZZQ010000086 (original name was: JAGZZQ010000086.1); JAGZZQ010000087 (original name was: JAGZZQ010000087.1); JAGZZQ010000027 (original name was: JAGZZQ010000027.1); JAGZZQ010000088 (original name was: JAGZZQ010000088.1); JAGZZQ010000028 (original name was: JAGZZQ010000028.1); JAGZZQ010000089 (original name was: JAGZZQ010000089.1); JAGZZQ010000090 (original name was: JAGZZQ010000090.1); JAGZZQ010000091 (original name was: JAGZZQ010000091.1); JAGZZQ010000001 (original name was: JAGZZQ010000001.1); JAGZZQ010000029 (original name was: JAGZZQ010000029.1); JAGZZQ010000030 (original name was: JAGZZQ010000030.1); JAGZZQ010000031 (original name was: JAGZZQ010000031.1); JAGZZQ010000032 (original name was: JAGZZQ010000032.1); JAGZZQ010000092 (original name was: JAGZZQ010000092.1); JAGZZQ010000033 (original name was: JAGZZQ010000033.1); JAGZZQ010000002 (original name was: JAGZZQ010000002.1); JAGZZQ010000093 (original name was: JAGZZQ010000093.1); JAGZZQ010000094 (original name was: JAGZZQ010000094.1); JAGZZQ010000034 (original name was: JAGZZQ010000034.1); JAGZZQ010000095 (original name was: JAGZZQ010000095.1); JAGZZQ010000096 (original name was: JAGZZQ010000096.1); JAGZZQ010000097 (original name was: JAGZZQ010000097.1); JAGZZQ010000098 (original name was: JAGZZQ010000098.1); JAGZZQ010000035 (original name was: JAGZZQ010000035.1); JAGZZQ010000036 (original name was: JAGZZQ010000036.1); JAGZZQ010000037 (original name was: JAGZZQ010000037.1); JAGZZQ010000038 (original name was: JAGZZQ010000038.1); JAGZZQ010000099 (original name was: JAGZZQ010000099.1); JAGZZQ010000003 (original name was: JAGZZQ010000003.1); JAGZZQ010000039 (original name was: JAGZZQ010000039.1); JAGZZQ010000040 (original name was: JAGZZQ010000040.1); JAGZZQ010000041 (original name was: JAGZZQ010000041.1); JAGZZQ010000042 (original name was: JAGZZQ010000042.1); JAGZZQ010000043 (original name was: JAGZZQ010000043.1); JAGZZQ010000004 (original name was: JAGZZQ010000004.1)

Compact view

c00097_JAGZZQ0.. - Region 1 - TPP_AA_metabolism

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Location: 1 - 17,590 nt. (total: 17,590 nt) Show pHMM detection rules used

Region on contig edge.

TPP_AA_metabolism: (TPP_enzyme_C and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or Gly_8-9_TMA or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and minimum(2, [ALS_ss_C, AlaDh_PNT_C, Arginase, BKACE, BcrAD_BadFG, Beta_elim_lyase, CPSase_L_D2, Cys_Met_Meta_PP, ELFV_dehydrog, GRDB, Glu_syn_central, Glu_synthase, Gly_reductase, HAAA1, HG2B1, HG2B2, HGD-D, HleuD1, HleuD2, HleuS1, HleuS2, Homoserine_dh, ILVD_EDD, IlvC, Lactoyl-CoA1, Lactoyl-CoA2, Lyase_aromatic, MAAL_C, OKR_DC_1_5_lysine, OKR_DC_1_5_ornithine, OKR_DC_1_7_arginine, OKR_DC_1_C, OTCace, PALP, Proline_reductase, Sacchrp_dh_C, TPL, Thr_dehydrat_C, TnaA, Urocanase]) and not (POR or POR_N or PFOR_II))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

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c00098_JAGZZQ0.. - Region 1 - Oxidative_glycerol