GCA_018381835.1 - 2 region(s)

Identified primary metabolite regions

JAGZRE010000007 (original name was: JAGZRE010000007.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 16.1	Oxidative_glycerol	Other	81,538	105,744

JAGZRE010000003 (original name was: JAGZRE010000003.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 25.1	TPP_AA_metabolism	Putative	103,075	133,341

Region	Type	Class	From	To	Most similar known cluster	Similarity
Region 16.1	Oxidative_glycerol	Other	81,538	105,744
Region 25.1	TPP_AA_metabolism	Putative	103,075	133,341

No primary metabolite regions were found in these records:: JAGZRE010000001 (original name was: JAGZRE010000001.1); JAGZRE010000024 (original name was: JAGZRE010000024.1); JAGZRE010000041 (original name was: JAGZRE010000041.1); JAGZRE010000042 (original name was: JAGZRE010000042.1); JAGZRE010000043 (original name was: JAGZRE010000043.1); JAGZRE010000044 (original name was: JAGZRE010000044.1); JAGZRE010000005 (original name was: JAGZRE010000005.1); JAGZRE010000006 (original name was: JAGZRE010000006.1); JAGZRE010000025 (original name was: JAGZRE010000025.1); JAGZRE010000026 (original name was: JAGZRE010000026.1); JAGZRE010000045 (original name was: JAGZRE010000045.1); JAGZRE010000046 (original name was: JAGZRE010000046.1); JAGZRE010000027 (original name was: JAGZRE010000027.1); JAGZRE010000047 (original name was: JAGZRE010000047.1); JAGZRE010000048 (original name was: JAGZRE010000048.1); JAGZRE010000028 (original name was: JAGZRE010000028.1); JAGZRE010000002 (original name was: JAGZRE010000002.1); JAGZRE010000008 (original name was: JAGZRE010000008.1); JAGZRE010000029 (original name was: JAGZRE010000029.1); JAGZRE010000030 (original name was: JAGZRE010000030.1); JAGZRE010000031 (original name was: JAGZRE010000031.1); JAGZRE010000009 (original name was: JAGZRE010000009.1); JAGZRE010000032 (original name was: JAGZRE010000032.1); JAGZRE010000010 (original name was: JAGZRE010000010.1); JAGZRE010000004 (original name was: JAGZRE010000004.1); JAGZRE010000011 (original name was: JAGZRE010000011.1); JAGZRE010000012 (original name was: JAGZRE010000012.1); JAGZRE010000033 (original name was: JAGZRE010000033.1); JAGZRE010000034 (original name was: JAGZRE010000034.1); JAGZRE010000035 (original name was: JAGZRE010000035.1); JAGZRE010000013 (original name was: JAGZRE010000013.1); JAGZRE010000014 (original name was: JAGZRE010000014.1); JAGZRE010000015 (original name was: JAGZRE010000015.1); JAGZRE010000016 (original name was: JAGZRE010000016.1); JAGZRE010000036 (original name was: JAGZRE010000036.1); JAGZRE010000037 (original name was: JAGZRE010000037.1); JAGZRE010000038 (original name was: JAGZRE010000038.1); JAGZRE010000017 (original name was: JAGZRE010000017.1); JAGZRE010000018 (original name was: JAGZRE010000018.1); JAGZRE010000019 (original name was: JAGZRE010000019.1); JAGZRE010000020 (original name was: JAGZRE010000020.1); JAGZRE010000021 (original name was: JAGZRE010000021.1); JAGZRE010000039 (original name was: JAGZRE010000039.1); JAGZRE010000022 (original name was: JAGZRE010000022.1); JAGZRE010000023 (original name was: JAGZRE010000023.1); JAGZRE010000040 (original name was: JAGZRE010000040.1)

Compact view

c00016_JAGZRE0.. - Region 1 - Oxidative_glycerol

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Location: 81,538 - 105,744 nt. (total: 24,207 nt) Show pHMM detection rules used

Oxidative_glycerol: ((Fe-ADH or Fe-ADH_2) and Dak1 and Dak2)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

c00025_JAGZRE0.. - Region 1 - TPP_AA_metabolism

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Location: 103,075 - 133,341 nt. (total: 30,267 nt) Show pHMM detection rules used

TPP_AA_metabolism: (TPP_enzyme_C and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or Gly_8-9_TMA or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and minimum(2, [ALS_ss_C, AlaDh_PNT_C, Arginase, BKACE, BcrAD_BadFG, Beta_elim_lyase, CPSase_L_D2, Cys_Met_Meta_PP, ELFV_dehydrog, GRDB, Glu_syn_central, Glu_synthase, Gly_reductase, HAAA1, HG2B1, HG2B2, HGD-D, HleuD1, HleuD2, HleuS1, HleuS2, Homoserine_dh, ILVD_EDD, IlvC, Lactoyl-CoA1, Lactoyl-CoA2, Lyase_aromatic, MAAL_C, OKR_DC_1_5_lysine, OKR_DC_1_5_ornithine, OKR_DC_1_7_arginine, OKR_DC_1_C, OTCace, PALP, Proline_reductase, Sacchrp_dh_C, TPL, Thr_dehydrat_C, TnaA, Urocanase]) and not (POR or POR_N or PFOR_II))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.