GCA_018599045.1 - 2 region(s)

Identified primary metabolite regions

JAHFVU010000018 (original name was: JAHFVU010000018.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 9.1	Oxidative_glycerol	Other	1	22,314

JAHFVU010000007 (original name was: JAHFVU010000007.1)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 57.1	TPP_AA_metabolism	Putative	44,636	74,903

Region	Type	Class	From	To	Most similar known cluster	Similarity
Region 9.1	Oxidative_glycerol	Other	1	22,314
Region 57.1	TPP_AA_metabolism	Putative	44,636	74,903

No primary metabolite regions were found in these records:: JAHFVU010000010 (original name was: JAHFVU010000010.1); JAHFVU010000011 (original name was: JAHFVU010000011.1); JAHFVU010000012 (original name was: JAHFVU010000012.1); JAHFVU010000013 (original name was: JAHFVU010000013.1); JAHFVU010000014 (original name was: JAHFVU010000014.1); JAHFVU010000015 (original name was: JAHFVU010000015.1); JAHFVU010000016 (original name was: JAHFVU010000016.1); JAHFVU010000017 (original name was: JAHFVU010000017.1); JAHFVU010000019 (original name was: JAHFVU010000019.1); JAHFVU010000001 (original name was: JAHFVU010000001.1); JAHFVU010000020 (original name was: JAHFVU010000020.1); JAHFVU010000021 (original name was: JAHFVU010000021.1); JAHFVU010000022 (original name was: JAHFVU010000022.1); JAHFVU010000023 (original name was: JAHFVU010000023.1); JAHFVU010000024 (original name was: JAHFVU010000024.1); JAHFVU010000025 (original name was: JAHFVU010000025.1); JAHFVU010000026 (original name was: JAHFVU010000026.1); JAHFVU010000027 (original name was: JAHFVU010000027.1); JAHFVU010000028 (original name was: JAHFVU010000028.1); JAHFVU010000029 (original name was: JAHFVU010000029.1); JAHFVU010000002 (original name was: JAHFVU010000002.1); JAHFVU010000030 (original name was: JAHFVU010000030.1); JAHFVU010000031 (original name was: JAHFVU010000031.1); JAHFVU010000032 (original name was: JAHFVU010000032.1); JAHFVU010000033 (original name was: JAHFVU010000033.1); JAHFVU010000034 (original name was: JAHFVU010000034.1); JAHFVU010000035 (original name was: JAHFVU010000035.1); JAHFVU010000036 (original name was: JAHFVU010000036.1); JAHFVU010000037 (original name was: JAHFVU010000037.1); JAHFVU010000038 (original name was: JAHFVU010000038.1); JAHFVU010000039 (original name was: JAHFVU010000039.1); JAHFVU010000003 (original name was: JAHFVU010000003.1); JAHFVU010000040 (original name was: JAHFVU010000040.1); JAHFVU010000041 (original name was: JAHFVU010000041.1); JAHFVU010000042 (original name was: JAHFVU010000042.1); JAHFVU010000043 (original name was: JAHFVU010000043.1); JAHFVU010000044 (original name was: JAHFVU010000044.1); JAHFVU010000045 (original name was: JAHFVU010000045.1); JAHFVU010000046 (original name was: JAHFVU010000046.1); JAHFVU010000047 (original name was: JAHFVU010000047.1); JAHFVU010000048 (original name was: JAHFVU010000048.1); JAHFVU010000049 (original name was: JAHFVU010000049.1); JAHFVU010000004 (original name was: JAHFVU010000004.1); JAHFVU010000050 (original name was: JAHFVU010000050.1); JAHFVU010000051 (original name was: JAHFVU010000051.1); JAHFVU010000052 (original name was: JAHFVU010000052.1); JAHFVU010000053 (original name was: JAHFVU010000053.1); JAHFVU010000054 (original name was: JAHFVU010000054.1); JAHFVU010000055 (original name was: JAHFVU010000055.1); JAHFVU010000056 (original name was: JAHFVU010000056.1); JAHFVU010000057 (original name was: JAHFVU010000057.1); JAHFVU010000058 (original name was: JAHFVU010000058.1); JAHFVU010000059 (original name was: JAHFVU010000059.1); JAHFVU010000005 (original name was: JAHFVU010000005.1); JAHFVU010000006 (original name was: JAHFVU010000006.1); JAHFVU010000008 (original name was: JAHFVU010000008.1); JAHFVU010000009 (original name was: JAHFVU010000009.1)

Compact view

c00009_JAHFVU0.. - Region 1 - Oxidative_glycerol

Download region GenBank file

Location: 1 - 22,314 nt. (total: 22,314 nt) Show pHMM detection rules used

Region on contig edge.

Oxidative_glycerol: ((Fe-ADH or Fe-ADH_2) and Dak1 and Dak2)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

c00057_JAHFVU0.. - Region 1 - TPP_AA_metabolism

Download region GenBank file

Location: 44,636 - 74,903 nt. (total: 30,268 nt) Show pHMM detection rules used

TPP_AA_metabolism: (TPP_enzyme_C and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or Gly_8-9_TMA or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and minimum(2, [ALS_ss_C, AlaDh_PNT_C, Arginase, BKACE, BcrAD_BadFG, Beta_elim_lyase, CPSase_L_D2, Cys_Met_Meta_PP, ELFV_dehydrog, GRDB, Glu_syn_central, Glu_synthase, Gly_reductase, HAAA1, HG2B1, HG2B2, HGD-D, HleuD1, HleuD2, HleuS1, HleuS2, Homoserine_dh, ILVD_EDD, IlvC, Lactoyl-CoA1, Lactoyl-CoA2, Lyase_aromatic, MAAL_C, OKR_DC_1_5_lysine, OKR_DC_1_5_ornithine, OKR_DC_1_7_arginine, OKR_DC_1_C, OTCace, PALP, Proline_reductase, Sacchrp_dh_C, TPL, Thr_dehydrat_C, TnaA, Urocanase]) and not (POR or POR_N or PFOR_II))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.